BLASTX nr result

ID: Rehmannia24_contig00002409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00002409
         (634 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006352672.1| PREDICTED: SKI family transcriptional corepr...    67   6e-09
ref|XP_004242421.1| PREDICTED: uncharacterized protein LOC101252...    64   4e-08

>ref|XP_006352672.1| PREDICTED: SKI family transcriptional corepressor 2-like [Solanum
           tuberosum]
          Length = 148

 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 40/101 (39%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
 Frame = +2

Query: 5   HHFFYVSPNCPLHRSILQPNNHXXXXXXXXXXXXXQNPQPLA-SIPPD--------PHFS 157
           HH F +  NCP H  +LQ N H             QNP+ +  S+ PD        P+ S
Sbjct: 22  HHHFQILHNCPFHSYMLQRNKHGPTCPLFTPSPLPQNPEQITPSLLPDDLNMQISEPNVS 81

Query: 158 FVGDDAKMMQDGTXXXXXXXXXXXPIFVLTDEWREFFAKSE 280
           F  +D+ MMQ+             PIFVLTDEWR+FFAKSE
Sbjct: 82  F--NDSGMMQNEGENFEDEDEEEEPIFVLTDEWRDFFAKSE 120


>ref|XP_004242421.1| PREDICTED: uncharacterized protein LOC101252895 [Solanum
           lycopersicum]
          Length = 154

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 40/108 (37%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
 Frame = +2

Query: 2   HHHFFYVSPNCPLHRSILQPNNHXXXXXXXXXXXXXQNPQPLA-SIPPD--------PHF 154
           HHH F +  NCPLH  +LQ N H             QNP+ +  S+ P+        P+ 
Sbjct: 20  HHHHFQIVHNCPLHSYMLQRNKHVPPCPLFTPFPLPQNPEQITPSLQPEVMNMQISEPNV 79

Query: 155 SFVGDDAKMMQDGTXXXXXXXXXXX------PIFVLTDEWREFFAKSE 280
           SF  D   M  +G                  PIFVLTDEWR+FFAKSE
Sbjct: 80  SF-NDSGMMQNEGENFEYEGENFEYEDEEEEPIFVLTDEWRDFFAKSE 126


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