BLASTX nr result

ID: Rehmannia24_contig00002091 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00002091
         (332 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002337696.1| predicted protein [Populus trichocarpa]            90   4e-16
ref|XP_002324856.1| hypothetical protein POPTR_0018s01620g [Popu...    90   4e-16
ref|XP_006353691.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    89   6e-16
ref|XP_004241774.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    89   6e-16
ref|XP_002515525.1| dead box ATP-dependent RNA helicase, putativ...    88   1e-15
ref|XP_002309623.1| hypothetical protein POPTR_0006s26940g [Popu...    88   1e-15
gb|ABK93079.1| unknown [Populus trichocarpa]                           88   1e-15
gb|EOY29499.1| DEAD/DEAH box RNA helicase family protein isoform...    87   2e-15
gb|EOY29498.1| DEAD/DEAH box RNA helicase family protein isoform...    87   2e-15
gb|EOY29497.1| DEAD/DEAH box RNA helicase family protein isoform...    87   2e-15
gb|EXB88204.1| DEAD-box ATP-dependent RNA helicase 56 [Morus not...    87   2e-15
ref|XP_006346265.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    87   3e-15
emb|CAA09205.1| RNA helicase [Arabidopsis thaliana]                    86   4e-15
emb|CBI21031.3| unnamed protein product [Vitis vinifera]               85   1e-14
ref|XP_002285072.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    85   1e-14
gb|EPS57760.1| hypothetical protein M569_17057, partial [Genlise...    82   6e-14
gb|AFV30230.1| ATP-dependent RNA helicase [Medicago sativa]            82   1e-13
gb|AFK41905.1| unknown [Medicago truncatula]                           82   1e-13
ref|XP_003588757.1| DEAD-box ATP-dependent RNA helicase [Medicag...    82   1e-13
dbj|BAJ53224.1| JHL06P13.3 [Jatropha curcas]                           81   1e-13

>ref|XP_002337696.1| predicted protein [Populus trichocarpa]
          Length = 247

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 44/62 (70%), Positives = 50/62 (80%)
 Frame = -1

Query: 188 MGDTKENDAXXXXXXXXXXXXEKAPDSVGAKVNGESVKKGYVGIHSSGFRDFLLKPELLR 9
           MG+T++NDA            +KAPDSVGAKVNGE+VKKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGETRDNDAYEEELLDYEEEDDKAPDSVGAKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 60

Query: 8   AI 3
           +I
Sbjct: 61  SI 62


>ref|XP_002324856.1| hypothetical protein POPTR_0018s01620g [Populus trichocarpa]
           gi|222866290|gb|EEF03421.1| hypothetical protein
           POPTR_0018s01620g [Populus trichocarpa]
          Length = 428

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 44/62 (70%), Positives = 50/62 (80%)
 Frame = -1

Query: 188 MGDTKENDAXXXXXXXXXXXXEKAPDSVGAKVNGESVKKGYVGIHSSGFRDFLLKPELLR 9
           MG+T++NDA            +KAPDSVGAKVNGE+VKKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGETRDNDAYEEELLDYEEEDDKAPDSVGAKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 60

Query: 8   AI 3
           +I
Sbjct: 61  SI 62


>ref|XP_006353691.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 15-like [Solanum
           tuberosum]
          Length = 428

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 46/62 (74%), Positives = 47/62 (75%)
 Frame = -1

Query: 188 MGDTKENDAXXXXXXXXXXXXEKAPDSVGAKVNGESVKKGYVGIHSSGFRDFLLKPELLR 9
           MGDTKEN+A            EKAPDSV  KVNGES KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGDTKENEAYEEELLDYEEDDEKAPDSVNGKVNGESAKKGYVGIHSSGFRDFLLKPELLR 60

Query: 8   AI 3
           AI
Sbjct: 61  AI 62


>ref|XP_004241774.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Solanum
           lycopersicum]
          Length = 428

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 46/62 (74%), Positives = 47/62 (75%)
 Frame = -1

Query: 188 MGDTKENDAXXXXXXXXXXXXEKAPDSVGAKVNGESVKKGYVGIHSSGFRDFLLKPELLR 9
           MGDTKEN+A            EKAPDSV  KVNGES KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGDTKENEAYEEELLDYEEDDEKAPDSVNGKVNGESAKKGYVGIHSSGFRDFLLKPELLR 60

Query: 8   AI 3
           AI
Sbjct: 61  AI 62


>ref|XP_002515525.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223545469|gb|EEF46974.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 275

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 45/62 (72%), Positives = 48/62 (77%)
 Frame = -1

Query: 188 MGDTKENDAXXXXXXXXXXXXEKAPDSVGAKVNGESVKKGYVGIHSSGFRDFLLKPELLR 9
           MG+T++NDA            EKAPDSV AKVNGES KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGETRDNDAYEEELLDYEEEEEKAPDSVAAKVNGESAKKGYVGIHSSGFRDFLLKPELLR 60

Query: 8   AI 3
           AI
Sbjct: 61  AI 62


>ref|XP_002309623.1| hypothetical protein POPTR_0006s26940g [Populus trichocarpa]
           gi|222855599|gb|EEE93146.1| hypothetical protein
           POPTR_0006s26940g [Populus trichocarpa]
          Length = 428

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 44/62 (70%), Positives = 49/62 (79%)
 Frame = -1

Query: 188 MGDTKENDAXXXXXXXXXXXXEKAPDSVGAKVNGESVKKGYVGIHSSGFRDFLLKPELLR 9
           MG+T++ND             EKAPDSVGAKVNGE+VKKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGETRDNDTYEEELLDYEEEDEKAPDSVGAKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 60

Query: 8   AI 3
           +I
Sbjct: 61  SI 62


>gb|ABK93079.1| unknown [Populus trichocarpa]
          Length = 428

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 44/62 (70%), Positives = 49/62 (79%)
 Frame = -1

Query: 188 MGDTKENDAXXXXXXXXXXXXEKAPDSVGAKVNGESVKKGYVGIHSSGFRDFLLKPELLR 9
           MG+T++ND             EKAPDSVGAKVNGE+VKKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGETRDNDTYEEELLDYEEEDEKAPDSVGAKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 60

Query: 8   AI 3
           +I
Sbjct: 61  SI 62


>gb|EOY29499.1| DEAD/DEAH box RNA helicase family protein isoform 3 [Theobroma
           cacao]
          Length = 429

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 45/62 (72%), Positives = 48/62 (77%)
 Frame = -1

Query: 188 MGDTKENDAXXXXXXXXXXXXEKAPDSVGAKVNGESVKKGYVGIHSSGFRDFLLKPELLR 9
           MG+T++NDA            EKAPDSV AKVNGES KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGETRDNDAYEEELLDYEEEEEKAPDSVTAKVNGESAKKGYVGIHSSGFRDFLLKPELLR 60

Query: 8   AI 3
           AI
Sbjct: 61  AI 62


>gb|EOY29498.1| DEAD/DEAH box RNA helicase family protein isoform 2 [Theobroma
           cacao]
          Length = 428

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 45/62 (72%), Positives = 48/62 (77%)
 Frame = -1

Query: 188 MGDTKENDAXXXXXXXXXXXXEKAPDSVGAKVNGESVKKGYVGIHSSGFRDFLLKPELLR 9
           MG+T++NDA            EKAPDSV AKVNGES KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGETRDNDAYEEELLDYEEEEEKAPDSVTAKVNGESAKKGYVGIHSSGFRDFLLKPELLR 60

Query: 8   AI 3
           AI
Sbjct: 61  AI 62


>gb|EOY29497.1| DEAD/DEAH box RNA helicase family protein isoform 1 [Theobroma
           cacao]
          Length = 485

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 45/62 (72%), Positives = 48/62 (77%)
 Frame = -1

Query: 188 MGDTKENDAXXXXXXXXXXXXEKAPDSVGAKVNGESVKKGYVGIHSSGFRDFLLKPELLR 9
           MG+T++NDA            EKAPDSV AKVNGES KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGETRDNDAYEEELLDYEEEEEKAPDSVTAKVNGESAKKGYVGIHSSGFRDFLLKPELLR 60

Query: 8   AI 3
           AI
Sbjct: 61  AI 62


>gb|EXB88204.1| DEAD-box ATP-dependent RNA helicase 56 [Morus notabilis]
          Length = 518

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 44/62 (70%), Positives = 48/62 (77%)
 Frame = -1

Query: 188 MGDTKENDAXXXXXXXXXXXXEKAPDSVGAKVNGESVKKGYVGIHSSGFRDFLLKPELLR 9
           MG+T++ND             EKAPDSVGAKVNGE+ KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGETRDNDVYDEELVDYEEEDEKAPDSVGAKVNGEAPKKGYVGIHSSGFRDFLLKPELLR 60

Query: 8   AI 3
           AI
Sbjct: 61  AI 62


>ref|XP_006346265.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 15-like isoform X1
           [Solanum tuberosum] gi|565358907|ref|XP_006346266.1|
           PREDICTED: DEAD-box ATP-dependent RNA helicase 15-like
           isoform X2 [Solanum tuberosum]
          Length = 428

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 44/62 (70%), Positives = 46/62 (74%)
 Frame = -1

Query: 188 MGDTKENDAXXXXXXXXXXXXEKAPDSVGAKVNGESVKKGYVGIHSSGFRDFLLKPELLR 9
           M DTKENDA            EKAPDS+  K+NGES KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MEDTKENDAYEEELLDYEEDDEKAPDSISGKINGESAKKGYVGIHSSGFRDFLLKPELLR 60

Query: 8   AI 3
           AI
Sbjct: 61  AI 62


>emb|CAA09205.1| RNA helicase [Arabidopsis thaliana]
          Length = 451

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 49/86 (56%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
 Frame = -1

Query: 257 FRNPNLPQNPYPIVP-IQQQNSSNMGDTKENDAXXXXXXXXXXXXEKAPDSVGAKVNGES 81
           FRNP+  ++P    P +   N  +MGD ++N+A            EK PDS G KVNGE+
Sbjct: 1   FRNPSRFRDPTNSAPYLSLLNLRSMGDARDNEAYEEELLDYEEEDEKVPDS-GNKVNGEA 59

Query: 80  VKKGYVGIHSSGFRDFLLKPELLRAI 3
           VKKGYVGIHSSGFRDFLLKPELLRAI
Sbjct: 60  VKKGYVGIHSSGFRDFLLKPELLRAI 85


>emb|CBI21031.3| unnamed protein product [Vitis vinifera]
          Length = 521

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 42/62 (67%), Positives = 47/62 (75%)
 Frame = -1

Query: 188 MGDTKENDAXXXXXXXXXXXXEKAPDSVGAKVNGESVKKGYVGIHSSGFRDFLLKPELLR 9
           MG+T++NDA            +KAPDSV  KVNGE+ KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGETRDNDAYEEELLDYEEEEDKAPDSVTGKVNGEAAKKGYVGIHSSGFRDFLLKPELLR 60

Query: 8   AI 3
           AI
Sbjct: 61  AI 62


>ref|XP_002285072.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Vitis
           vinifera]
          Length = 428

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 42/62 (67%), Positives = 47/62 (75%)
 Frame = -1

Query: 188 MGDTKENDAXXXXXXXXXXXXEKAPDSVGAKVNGESVKKGYVGIHSSGFRDFLLKPELLR 9
           MG+T++NDA            +KAPDSV  KVNGE+ KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGETRDNDAYEEELLDYEEEEDKAPDSVTGKVNGEAAKKGYVGIHSSGFRDFLLKPELLR 60

Query: 8   AI 3
           AI
Sbjct: 61  AI 62


>gb|EPS57760.1| hypothetical protein M569_17057, partial [Genlisea aurea]
          Length = 206

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 42/62 (67%), Positives = 45/62 (72%)
 Frame = -1

Query: 188 MGDTKENDAXXXXXXXXXXXXEKAPDSVGAKVNGESVKKGYVGIHSSGFRDFLLKPELLR 9
           MGDTKEN+A            EK PDS  AK NGE+ KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGDTKENEAYEEELLDYEEEEEKVPDSAAAKTNGEAGKKGYVGIHSSGFRDFLLKPELLR 60

Query: 8   AI 3
           +I
Sbjct: 61  SI 62


>gb|AFV30230.1| ATP-dependent RNA helicase [Medicago sativa]
          Length = 427

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 45/62 (72%), Positives = 47/62 (75%)
 Frame = -1

Query: 188 MGDTKENDAXXXXXXXXXXXXEKAPDSVGAKVNGESVKKGYVGIHSSGFRDFLLKPELLR 9
           MG+TKE +             EKAPDSVGAKVNGES KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGETKE-ETYEEELLDYEEEDEKAPDSVGAKVNGESGKKGYVGIHSSGFRDFLLKPELLR 59

Query: 8   AI 3
           AI
Sbjct: 60  AI 61


>gb|AFK41905.1| unknown [Medicago truncatula]
          Length = 427

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 45/62 (72%), Positives = 47/62 (75%)
 Frame = -1

Query: 188 MGDTKENDAXXXXXXXXXXXXEKAPDSVGAKVNGESVKKGYVGIHSSGFRDFLLKPELLR 9
           MG+TKE +             EKAPDSVGAKVNGES KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGETKE-ETYEEELLDYEEEDEKAPDSVGAKVNGESGKKGYVGIHSSGFRDFLLKPELLR 59

Query: 8   AI 3
           AI
Sbjct: 60  AI 61


>ref|XP_003588757.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355477805|gb|AES59008.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 427

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 45/62 (72%), Positives = 47/62 (75%)
 Frame = -1

Query: 188 MGDTKENDAXXXXXXXXXXXXEKAPDSVGAKVNGESVKKGYVGIHSSGFRDFLLKPELLR 9
           MG+TKE +             EKAPDSVGAKVNGES KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGETKE-ETYEEELLDYEEEDEKAPDSVGAKVNGESGKKGYVGIHSSGFRDFLLKPELLR 59

Query: 8   AI 3
           AI
Sbjct: 60  AI 61


>dbj|BAJ53224.1| JHL06P13.3 [Jatropha curcas]
          Length = 455

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 42/62 (67%), Positives = 44/62 (70%)
 Frame = -1

Query: 188 MGDTKENDAXXXXXXXXXXXXEKAPDSVGAKVNGESVKKGYVGIHSSGFRDFLLKPELLR 9
           MG+ K+NDA            EKAPDSV AK   ES KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGEVKDNDAYEEELLDYEEEDEKAPDSVSAKAGAESAKKGYVGIHSSGFRDFLLKPELLR 60

Query: 8   AI 3
           AI
Sbjct: 61  AI 62


Top