BLASTX nr result

ID: Rehmannia24_contig00001787 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00001787
         (512 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004248833.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    89   8e-16
ref|XP_006339950.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    88   1e-15
gb|ABJ16351.1| cytokinesis negative regulator RCP1 [Nicotiana ta...    72   6e-11

>ref|XP_004248833.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Solanum
           lycopersicum]
          Length = 291

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 42/83 (50%), Positives = 57/83 (68%)
 Frame = +3

Query: 21  EGYMGSMRLEELVDDEADLYGFRSTLRHIARRHRWNDEGNIGSGSEGNLFSPTQIGEVER 200
           + ++ +MRLEE + ++ DL+GFR TLR +ARRH+ + E      S   L SPTQIG+  +
Sbjct: 193 QDFVAAMRLEEFLGEQEDLFGFRRTLRRVARRHQLDREDTTRGDSLEFLLSPTQIGQTGQ 252

Query: 201 GDEVLDRQNSVETVSSWPTWQVE 269
           GD V+ R NSVETVSSWP W +E
Sbjct: 253 GDGVVARANSVETVSSWPNWPLE 275


>ref|XP_006339950.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Solanum
           tuberosum]
          Length = 291

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 42/83 (50%), Positives = 56/83 (67%)
 Frame = +3

Query: 21  EGYMGSMRLEELVDDEADLYGFRSTLRHIARRHRWNDEGNIGSGSEGNLFSPTQIGEVER 200
           + ++ +MRLEE + ++ DL+GFR TLR +ARRH+ + E      S   L SPTQIG+  +
Sbjct: 193 QNFVAAMRLEEFLGEQEDLFGFRRTLRRVARRHQLDREDTTRGDSLEFLLSPTQIGQTGQ 252

Query: 201 GDEVLDRQNSVETVSSWPTWQVE 269
           GD V+ R NSVETVSSWP W  E
Sbjct: 253 GDGVVARANSVETVSSWPNWPPE 275


>gb|ABJ16351.1| cytokinesis negative regulator RCP1 [Nicotiana tabacum]
          Length = 302

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 39/83 (46%), Positives = 54/83 (65%)
 Frame = +3

Query: 21  EGYMGSMRLEELVDDEADLYGFRSTLRHIARRHRWNDEGNIGSGSEGNLFSPTQIGEVER 200
           E ++G+MRL E++ +E DL+GFR TLR +ARRH+ +       G E      + IG+  +
Sbjct: 206 ERFLGAMRLGEILAEEEDLFGFRRTLRRVARRHQLD-------GGE------STIGQAGQ 252

Query: 201 GDEVLDRQNSVETVSSWPTWQVE 269
           G  V+ R NSVETVSSWP+W VE
Sbjct: 253 GVGVVARANSVETVSSWPSWPVE 275


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