BLASTX nr result
ID: Rehmannia24_contig00001232
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00001232
(398 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ13473.1| hypothetical protein PRUPE_ppa013712mg [Prunus pe... 69 6e-10
ref|NP_001235677.1| uncharacterized protein LOC100527666 [Glycin... 65 9e-09
gb|AFK47048.1| unknown [Lotus japonicus] 64 2e-08
ref|XP_006369585.1| hypothetical protein POPTR_0001s26410g [Popu... 64 3e-08
ref|XP_003599257.1| Photosystem II 5 kDa protein [Medicago trunc... 64 3e-08
sp|P31336.1|PST2_GOSHI RecName: Full=Photosystem II 5 kDa protei... 62 6e-08
ref|XP_002314076.1| photosystem II 5 kD family protein [Populus ... 62 6e-08
ref|XP_004291777.1| PREDICTED: photosystem II 5 kDa protein, chl... 62 1e-07
ref|XP_004143237.1| PREDICTED: photosystem II 5 kDa protein, chl... 62 1e-07
ref|XP_002298398.1| predicted protein [Populus trichocarpa] gi|1... 61 1e-07
ref|NP_001238741.1| uncharacterized protein LOC100305919 [Glycin... 60 2e-07
gb|EOX96667.1| Photosystem II 5 kDa protein, chloroplastic [Theo... 59 7e-07
ref|XP_006304787.1| hypothetical protein CARUB_v10012335mg [Caps... 59 7e-07
gb|AAM61462.1| photosystem II [Arabidopsis thaliana] 59 7e-07
gb|AFK48333.1| unknown [Medicago truncatula] 59 9e-07
ref|XP_006598270.1| PREDICTED: photosystem II 5 kDa protein, chl... 58 1e-06
ref|XP_006446137.1| hypothetical protein CICLE_v10017247mg [Citr... 58 1e-06
ref|NP_564589.1| photosystem II 5 kD protein [Arabidopsis thalia... 58 1e-06
gb|ESW03384.1| hypothetical protein PHAVU_011G009700g [Phaseolus... 57 2e-06
ref|XP_002894313.1| photosystem II 5 kD protein [Arabidopsis lyr... 57 2e-06
>gb|EMJ13473.1| hypothetical protein PRUPE_ppa013712mg [Prunus persica]
Length = 107
Score = 68.9 bits (167), Expect = 6e-10
Identities = 34/53 (64%), Positives = 37/53 (69%)
Frame = -1
Query: 371 SGRRELMFXXXXXXXXXXXXXXXADEPKRGSAEAKKKYAPICVTMPTARICRN 213
SGRR+LMF ADEPKRGS EAK+KYAP+CVTMPTARICRN
Sbjct: 55 SGRRDLMFAAAAAAACSIAKAAMADEPKRGSKEAKEKYAPVCVTMPTARICRN 107
>ref|NP_001235677.1| uncharacterized protein LOC100527666 [Glycine max]
gi|255632908|gb|ACU16808.1| unknown [Glycine max]
Length = 104
Score = 65.1 bits (157), Expect = 9e-09
Identities = 33/53 (62%), Positives = 35/53 (66%)
Frame = -1
Query: 371 SGRRELMFXXXXXXXXXXXXXXXADEPKRGSAEAKKKYAPICVTMPTARICRN 213
+GRR LMF ADEPK G+ EAKKKYAPICVTMPTARICRN
Sbjct: 52 NGRRNLMFAAAAAAVCSVAGMAVADEPKPGTPEAKKKYAPICVTMPTARICRN 104
>gb|AFK47048.1| unknown [Lotus japonicus]
Length = 107
Score = 63.9 bits (154), Expect = 2e-08
Identities = 31/52 (59%), Positives = 34/52 (65%)
Frame = -1
Query: 371 SGRRELMFXXXXXXXXXXXXXXXADEPKRGSAEAKKKYAPICVTMPTARICR 216
+GRR LMF ADEPK GS EAKKKYAP+CVTMPTAR+CR
Sbjct: 51 NGRRNLMFVSAAAAVCSVAGIALADEPKNGSPEAKKKYAPVCVTMPTARVCR 102
>ref|XP_006369585.1| hypothetical protein POPTR_0001s26410g [Populus trichocarpa]
gi|550348232|gb|ERP66154.1| hypothetical protein
POPTR_0001s26410g [Populus trichocarpa]
Length = 110
Score = 63.5 bits (153), Expect = 3e-08
Identities = 34/54 (62%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Frame = -1
Query: 371 SGRRELMFXXXXXXXXXXXXXXXADE-PKRGSAEAKKKYAPICVTMPTARICRN 213
SGRR+LMF ADE P+RG+ EAKKKYAPICVTMPTARICRN
Sbjct: 9 SGRRDLMFAAAAAAAYSIARVAIADEEPERGTPEAKKKYAPICVTMPTARICRN 62
>ref|XP_003599257.1| Photosystem II 5 kDa protein [Medicago truncatula]
gi|355488305|gb|AES69508.1| Photosystem II 5 kDa protein
[Medicago truncatula]
Length = 106
Score = 63.5 bits (153), Expect = 3e-08
Identities = 33/54 (61%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Frame = -1
Query: 371 SGRRELMFXXXXXXXXXXXXXXXADE-PKRGSAEAKKKYAPICVTMPTARICRN 213
+GRR+LMF ADE PKRG+ EAKKKYAP+CVTMPTARICRN
Sbjct: 53 NGRRDLMFAAAAAAVSTFAGVAMADEEPKRGTPEAKKKYAPVCVTMPTARICRN 106
>sp|P31336.1|PST2_GOSHI RecName: Full=Photosystem II 5 kDa protein, chloroplastic;
Short=PSII-T; AltName: Full=Light-regulated unknown 11
kDa protein; Flags: Precursor gi|18512|emb|CAA38027.1|
hypothetical protein [Gossypium hirsutum]
Length = 105
Score = 62.4 bits (150), Expect = 6e-08
Identities = 33/53 (62%), Positives = 36/53 (67%)
Frame = -1
Query: 371 SGRRELMFXXXXXXXXXXXXXXXADEPKRGSAEAKKKYAPICVTMPTARICRN 213
+GRRE+MF A EPKRGSAEAKK YAP+CVTMPTARICRN
Sbjct: 54 NGRREMMFAAAAAAICSVAGVATA-EPKRGSAEAKKAYAPVCVTMPTARICRN 105
>ref|XP_002314076.1| photosystem II 5 kD family protein [Populus trichocarpa]
gi|222850484|gb|EEE88031.1| photosystem II 5 kD family
protein [Populus trichocarpa]
Length = 105
Score = 62.4 bits (150), Expect = 6e-08
Identities = 33/53 (62%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Frame = -1
Query: 368 GRRELMFXXXXXXXXXXXXXXXADE-PKRGSAEAKKKYAPICVTMPTARICRN 213
GRR+LMF ADE P+RG+ EAKKKYAPICVTMPTARICRN
Sbjct: 53 GRRDLMFAAAAAAAYSIARVAIADEEPRRGTPEAKKKYAPICVTMPTARICRN 105
>ref|XP_004291777.1| PREDICTED: photosystem II 5 kDa protein, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 104
Score = 61.6 bits (148), Expect = 1e-07
Identities = 30/52 (57%), Positives = 35/52 (67%)
Frame = -1
Query: 371 SGRRELMFXXXXXXXXXXXXXXXADEPKRGSAEAKKKYAPICVTMPTARICR 216
SGRR+L+F ADEP+RG+ AKKKYAP+CVTMPTARICR
Sbjct: 52 SGRRDLIFAAAAAAACSIAKVAMADEPERGTPAAKKKYAPVCVTMPTARICR 103
>ref|XP_004143237.1| PREDICTED: photosystem II 5 kDa protein, chloroplastic-like
[Cucumis sativus]
Length = 106
Score = 61.6 bits (148), Expect = 1e-07
Identities = 32/53 (60%), Positives = 34/53 (64%)
Frame = -1
Query: 374 RSGRRELMFXXXXXXXXXXXXXXXADEPKRGSAEAKKKYAPICVTMPTARICR 216
R GRREL+ ADEP RGS EAK+KYAPICVTMPTARICR
Sbjct: 53 RQGRRELVAAAVTVAAATLAKAAMADEPARGSPEAKQKYAPICVTMPTARICR 105
>ref|XP_002298398.1| predicted protein [Populus trichocarpa] gi|118487685|gb|ABK95667.1|
unknown [Populus trichocarpa]
gi|118488853|gb|ABK96236.1| unknown [Populus trichocarpa
x Populus deltoides] gi|118488867|gb|ABK96243.1| unknown
[Populus trichocarpa x Populus deltoides]
gi|118489821|gb|ABK96710.1| unknown [Populus trichocarpa
x Populus deltoides] gi|118489889|gb|ABK96742.1| unknown
[Populus trichocarpa x Populus deltoides]
Length = 105
Score = 61.2 bits (147), Expect = 1e-07
Identities = 33/53 (62%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Frame = -1
Query: 371 SGRRELMFXXXXXXXXXXXXXXXADE-PKRGSAEAKKKYAPICVTMPTARICR 216
SGRR+LMF ADE P+RG+ EAKKKYAPICVTMPTARICR
Sbjct: 52 SGRRDLMFAAAAAAAYSIARVAIADEEPERGTPEAKKKYAPICVTMPTARICR 104
>ref|NP_001238741.1| uncharacterized protein LOC100305919 [Glycine max]
gi|255626973|gb|ACU13831.1| unknown [Glycine max]
Length = 101
Score = 60.5 bits (145), Expect = 2e-07
Identities = 30/53 (56%), Positives = 34/53 (64%)
Frame = -1
Query: 371 SGRRELMFXXXXXXXXXXXXXXXADEPKRGSAEAKKKYAPICVTMPTARICRN 213
+GRR LMF ADEPK G++EAKKKYAP+CVT PTA ICRN
Sbjct: 49 NGRRNLMFAVAAAAVPSVAGMAVADEPKPGTSEAKKKYAPVCVTNPTASICRN 101
>gb|EOX96667.1| Photosystem II 5 kDa protein, chloroplastic [Theobroma cacao]
Length = 106
Score = 58.9 bits (141), Expect = 7e-07
Identities = 30/51 (58%), Positives = 33/51 (64%)
Frame = -1
Query: 371 SGRRELMFXXXXXXXXXXXXXXXADEPKRGSAEAKKKYAPICVTMPTARIC 219
+GRRELMF ADEPK G+ EA+K YAPICVTMPTARIC
Sbjct: 54 NGRRELMFAAAAAAVCSVAGVAAADEPKPGTPEARKVYAPICVTMPTARIC 104
>ref|XP_006304787.1| hypothetical protein CARUB_v10012335mg [Capsella rubella]
gi|482573498|gb|EOA37685.1| hypothetical protein
CARUB_v10012335mg [Capsella rubella]
Length = 106
Score = 58.9 bits (141), Expect = 7e-07
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = -1
Query: 299 DEPKRGSAEAKKKYAPICVTMPTARICRN 213
DEPKRG+ AKKKYAP+CVTMPTARICRN
Sbjct: 78 DEPKRGTEAAKKKYAPVCVTMPTARICRN 106
>gb|AAM61462.1| photosystem II [Arabidopsis thaliana]
Length = 106
Score = 58.9 bits (141), Expect = 7e-07
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = -1
Query: 299 DEPKRGSAEAKKKYAPICVTMPTARICRN 213
DEPKRG+ AKKKYAP+CVTMPTARICRN
Sbjct: 78 DEPKRGTEAAKKKYAPVCVTMPTARICRN 106
>gb|AFK48333.1| unknown [Medicago truncatula]
Length = 108
Score = 58.5 bits (140), Expect = 9e-07
Identities = 31/53 (58%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = -1
Query: 371 SGRRELMFXXXXXXXXXXXXXXXA-DEPKRGSAEAKKKYAPICVTMPTARICR 216
+GRR +MF A DEPKRGS EAKK YAP+CVTMPTARICR
Sbjct: 55 NGRRNIMFAAAAAAVCSVAGMALAADEPKRGSPEAKKAYAPVCVTMPTARICR 107
>ref|XP_006598270.1| PREDICTED: photosystem II 5 kDa protein, chloroplastic-like
[Glycine max]
Length = 133
Score = 58.2 bits (139), Expect = 1e-06
Identities = 31/54 (57%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = -1
Query: 371 SGRRELMFXXXXXXXXXXXXXXXA-DEPKRGSAEAKKKYAPICVTMPTARICRN 213
+GRR LMF DEPK G+ AKKKYAPICVTMPTARICRN
Sbjct: 80 NGRRNLMFAAAAAAAVCSVAGMAVADEPKPGTPAAKKKYAPICVTMPTARICRN 133
>ref|XP_006446137.1| hypothetical protein CICLE_v10017247mg [Citrus clementina]
gi|568832832|ref|XP_006470630.1| PREDICTED: photosystem
II 5 kDa protein, chloroplastic-like [Citrus sinensis]
gi|557548748|gb|ESR59377.1| hypothetical protein
CICLE_v10017247mg [Citrus clementina]
Length = 111
Score = 57.8 bits (138), Expect = 1e-06
Identities = 30/54 (55%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = -1
Query: 371 SGRRELMFXXXXXXXXXXXXXXXAD--EPKRGSAEAKKKYAPICVTMPTARICR 216
+GRREL+F A+ EPKRG+ +AKKKYAP+CVTMPTARICR
Sbjct: 57 NGRRELVFAAAAAAACSIAKVAMAESEEPKRGTPDAKKKYAPVCVTMPTARICR 110
>ref|NP_564589.1| photosystem II 5 kD protein [Arabidopsis thaliana]
gi|4836947|gb|AAD30649.1|AC006085_22 Putative
photosystem II 5 KD protein [Arabidopsis thaliana]
gi|12325362|gb|AAG52621.1|AC024261_8 unknown protein;
88255-88575 [Arabidopsis thaliana]
gi|14326535|gb|AAK60312.1|AF385721_1 At1g51400/F5D21_10
[Arabidopsis thaliana] gi|15215584|gb|AAK91337.1|
At1g51400/F5D21_10 [Arabidopsis thaliana]
gi|22137316|gb|AAM91503.1| At1g51400/F5D21_10
[Arabidopsis thaliana] gi|332194541|gb|AEE32662.1|
photosystem II 5 kD protein [Arabidopsis thaliana]
Length = 106
Score = 57.8 bits (138), Expect = 1e-06
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = -1
Query: 299 DEPKRGSAEAKKKYAPICVTMPTARICRN 213
DEPKRG+ AKKKYAP+CVTMPTA+ICRN
Sbjct: 78 DEPKRGTEAAKKKYAPVCVTMPTAKICRN 106
>gb|ESW03384.1| hypothetical protein PHAVU_011G009700g [Phaseolus vulgaris]
Length = 106
Score = 57.4 bits (137), Expect = 2e-06
Identities = 29/51 (56%), Positives = 32/51 (62%)
Frame = -1
Query: 371 SGRRELMFXXXXXXXXXXXXXXXADEPKRGSAEAKKKYAPICVTMPTARIC 219
+GRR +MF ADEPKRG+ EAKK Y PICVTMPTARIC
Sbjct: 54 NGRRNMMFAAAAAAVCSVAGMSMADEPKRGTPEAKKIYYPICVTMPTARIC 104
>ref|XP_002894313.1| photosystem II 5 kD protein [Arabidopsis lyrata subsp. lyrata]
gi|297340155|gb|EFH70572.1| photosystem II 5 kD protein
[Arabidopsis lyrata subsp. lyrata]
Length = 106
Score = 57.4 bits (137), Expect = 2e-06
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = -1
Query: 299 DEPKRGSAEAKKKYAPICVTMPTARICRN 213
+EPKRG+ AKKKYAP+CVTMPTARICRN
Sbjct: 78 EEPKRGTEAAKKKYAPVCVTMPTARICRN 106