BLASTX nr result
ID: Rehmannia24_contig00000613
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00000613
(488 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004242515.1| PREDICTED: U5 small nuclear ribonucleoprotei... 176 8e-48
ref|XP_006350847.1| PREDICTED: U5 small nuclear ribonucleoprotei... 176 1e-47
gb|EPS72238.1| hypothetical protein M569_02516, partial [Genlise... 167 5e-45
ref|XP_004488845.1| PREDICTED: U5 small nuclear ribonucleoprotei... 168 8e-45
ref|XP_003595992.1| U5 small nuclear ribonucleoprotein 200 kDa h... 167 4e-44
ref|XP_002518663.1| U520, putative [Ricinus communis] gi|2235420... 169 5e-44
gb|ESW21254.1| hypothetical protein PHAVU_005G055300g [Phaseolus... 164 1e-43
ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotei... 164 2e-43
ref|XP_006849925.1| hypothetical protein AMTR_s00022p00114710 [A... 164 7e-43
ref|XP_002322252.1| U5 small nuclear ribonucleoprotein helicase ... 163 5e-42
ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei... 174 1e-41
emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera] 174 1e-41
ref|XP_006480405.1| PREDICTED: U5 small nuclear ribonucleoprotei... 160 2e-41
ref|XP_002318725.2| U5 small nuclear ribonucleoprotein helicase ... 165 2e-41
ref|XP_002966396.1| hypothetical protein SELMODRAFT_144158 [Sela... 160 3e-41
ref|XP_002978166.1| hypothetical protein SELMODRAFT_108064 [Sela... 160 3e-41
ref|XP_001757495.1| predicted protein [Physcomitrella patens] gi... 160 7e-41
ref|XP_006295588.1| hypothetical protein CARUB_v10024696mg [Caps... 157 8e-41
ref|NP_173520.1| putative U5 small nuclear ribonucleoprotein hel... 171 9e-41
gb|AAL31915.1|AF419583_1 At1g20960/F9H16_5 [Arabidopsis thaliana... 171 9e-41
>ref|XP_004242515.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Solanum lycopersicum]
Length = 2174
Score = 176 bits (447), Expect(2) = 8e-48
Identities = 95/134 (70%), Positives = 101/134 (75%)
Frame = +3
Query: 3 VVGVIQNKQDAVDYLT*TFMYRRLTQNPNYFNLQGVSNRHLSDHLSELVENTLSDLEASK 182
VVGVIQNKQDAVDYLT TFMYRRLTQNPNY+NLQGVS+RHLSD LSELVENT+SDLEASK
Sbjct: 1773 VVGVIQNKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDQLSELVENTISDLEASK 1832
Query: 183 CVAVEDEYLLSPLNLGMIAXXXXXXXXXXXXXXXXXXXXXXXXXXXEILASASEYELPPI 362
CV VEDE+LLSPLNLGMIA EILASASE+E PI
Sbjct: 1833 CVTVEDEFLLSPLNLGMIASYYYISYTTIERFSSSVTSKTKLKGLLEILASASEFEQLPI 1892
Query: 363 RPGEEELI*RLISH 404
RPGEEELI RLI+H
Sbjct: 1893 RPGEEELIRRLINH 1906
Score = 39.7 bits (91), Expect(2) = 8e-48
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 6/39 (15%)
Frame = +1
Query: 385 YEG*SVMNPNVKANALLHAHFS------HLASDQQEVLI 483
+E +P+VKANALL AHFS +LASDQQEVL+
Sbjct: 1911 FENPKYTDPHVKANALLQAHFSRQMVGGNLASDQQEVLL 1949
>ref|XP_006350847.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Solanum tuberosum]
Length = 2174
Score = 176 bits (446), Expect(2) = 1e-47
Identities = 94/134 (70%), Positives = 101/134 (75%)
Frame = +3
Query: 3 VVGVIQNKQDAVDYLT*TFMYRRLTQNPNYFNLQGVSNRHLSDHLSELVENTLSDLEASK 182
VVGVIQNKQDAVDYLT TFMYRRLTQNPNY+NLQGVS+RHLSD LSELVENT+SDLEASK
Sbjct: 1773 VVGVIQNKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDQLSELVENTISDLEASK 1832
Query: 183 CVAVEDEYLLSPLNLGMIAXXXXXXXXXXXXXXXXXXXXXXXXXXXEILASASEYELPPI 362
CV +EDE+LLSPLNLGMIA EILASASE+E PI
Sbjct: 1833 CVTIEDEFLLSPLNLGMIASYYYISYTTIERFSSSVTSKTKLKGLLEILASASEFEQLPI 1892
Query: 363 RPGEEELI*RLISH 404
RPGEEELI RLI+H
Sbjct: 1893 RPGEEELIRRLINH 1906
Score = 39.7 bits (91), Expect(2) = 1e-47
Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 6/39 (15%)
Frame = +1
Query: 385 YEG*SVMNPNVKANALLHAHFS------HLASDQQEVLI 483
+E +P+VKANALL AHFS +LASDQQEVL+
Sbjct: 1911 FENPKYTDPHVKANALLQAHFSRQMVGGNLASDQQEVLL 1949
>gb|EPS72238.1| hypothetical protein M569_02516, partial [Genlisea aurea]
Length = 1210
Score = 167 bits (422), Expect(2) = 5e-45
Identities = 88/135 (65%), Positives = 99/135 (73%)
Frame = +3
Query: 3 VVGVIQNKQDAVDYLT*TFMYRRLTQNPNYFNLQGVSNRHLSDHLSELVENTLSDLEASK 182
VVGV++NKQDAVDYLT TFMYRRLTQNPNY+NLQGVS+RHLSDHLSELVE T+SDLE SK
Sbjct: 823 VVGVVKNKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVETTVSDLETSK 882
Query: 183 CVAVEDEYLLSPLNLGMIAXXXXXXXXXXXXXXXXXXXXXXXXXXXEILASASEYELPPI 362
CVA ED +LLSP NLGMIA EILASASE+E P+
Sbjct: 883 CVATEDGFLLSPSNLGMIASYYYIGYTTIERFSSSLTAKTKLKGLLEILASASEFEELPM 942
Query: 363 RPGEEELI*RLISHE 407
RPGEEEL+ RLI+H+
Sbjct: 943 RPGEEELLRRLINHQ 957
Score = 40.0 bits (92), Expect(2) = 5e-45
Identities = 22/31 (70%), Positives = 24/31 (77%), Gaps = 6/31 (19%)
Frame = +1
Query: 412 NVKANALLHAHFS------HLASDQQEVLIY 486
NVKANALL AHFS +LASDQQ+VLIY
Sbjct: 968 NVKANALLQAHFSRRPIGGNLASDQQQVLIY 998
>ref|XP_004488845.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
isoform X1 [Cicer arietinum]
gi|502089221|ref|XP_004488846.1| PREDICTED: U5 small
nuclear ribonucleoprotein 200 kDa helicase-like isoform
X2 [Cicer arietinum]
Length = 2187
Score = 168 bits (426), Expect(2) = 8e-45
Identities = 87/135 (64%), Positives = 100/135 (74%)
Frame = +3
Query: 3 VVGVIQNKQDAVDYLT*TFMYRRLTQNPNYFNLQGVSNRHLSDHLSELVENTLSDLEASK 182
V G+I+NKQDAVDYLT TFMYRRLTQNPNY+NLQGVS+RHLSDHLSE+VENTLSDLEASK
Sbjct: 1783 VAGIIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSEMVENTLSDLEASK 1842
Query: 183 CVAVEDEYLLSPLNLGMIAXXXXXXXXXXXXXXXXXXXXXXXXXXXEILASASEYELPPI 362
CVA+ED+ LSPLNLGMIA E+L+SASEY PI
Sbjct: 1843 CVAIEDDMDLSPLNLGMIASYYYISYTTIERFSSSLTSKTKMKGLLEVLSSASEYAHLPI 1902
Query: 363 RPGEEELI*RLISHE 407
RPGE+EL+ RLI+H+
Sbjct: 1903 RPGEDELVRRLINHQ 1917
Score = 37.7 bits (86), Expect(2) = 8e-45
Identities = 21/39 (53%), Positives = 27/39 (69%), Gaps = 6/39 (15%)
Frame = +1
Query: 385 YEG*SVMNPNVKANALLHAHFS------HLASDQQEVLI 483
+E V +P+VKANALL AHFS +LA DQ+EVL+
Sbjct: 1921 FENPKVTDPHVKANALLQAHFSRQFVGGNLALDQREVLL 1959
>ref|XP_003595992.1| U5 small nuclear ribonucleoprotein 200 kDa helicase [Medicago
truncatula] gi|355485040|gb|AES66243.1| U5 small nuclear
ribonucleoprotein 200 kDa helicase [Medicago truncatula]
Length = 2223
Score = 167 bits (423), Expect(2) = 4e-44
Identities = 86/135 (63%), Positives = 100/135 (74%)
Frame = +3
Query: 3 VVGVIQNKQDAVDYLT*TFMYRRLTQNPNYFNLQGVSNRHLSDHLSELVENTLSDLEASK 182
V G+I+NKQDAVDYLT TFMYRRLTQNPNY+NLQGVS+RHLSDHLSE+VENTLSDLEASK
Sbjct: 1824 VAGIIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSEMVENTLSDLEASK 1883
Query: 183 CVAVEDEYLLSPLNLGMIAXXXXXXXXXXXXXXXXXXXXXXXXXXXEILASASEYELPPI 362
CV++ED+ LSPLNLGMIA E+L+SASEY PI
Sbjct: 1884 CVSIEDDMDLSPLNLGMIASYYYISYTTIERFSSSLTSKTKMKGLLEVLSSASEYAHLPI 1943
Query: 363 RPGEEELI*RLISHE 407
RPGEEE++ RLI+H+
Sbjct: 1944 RPGEEEVVRRLINHQ 1958
Score = 36.6 bits (83), Expect(2) = 4e-44
Identities = 20/39 (51%), Positives = 27/39 (69%), Gaps = 6/39 (15%)
Frame = +1
Query: 385 YEG*SVMNPNVKANALLHAHFS------HLASDQQEVLI 483
+E V +P+VKANALL AHFS +L+ DQ+EVL+
Sbjct: 1962 FENPKVTDPHVKANALLQAHFSRQSVGGNLSLDQREVLL 2000
>ref|XP_002518663.1| U520, putative [Ricinus communis] gi|223542044|gb|EEF43588.1| U520,
putative [Ricinus communis]
Length = 1809
Score = 169 bits (429), Expect(2) = 5e-44
Identities = 90/135 (66%), Positives = 100/135 (74%)
Frame = +3
Query: 3 VVGVIQNKQDAVDYLT*TFMYRRLTQNPNYFNLQGVSNRHLSDHLSELVENTLSDLEASK 182
V GVI+NKQDAVDYLT TFMYRRLTQNPNY+NLQGVS+RHLSDHLSELVENTLSDLEASK
Sbjct: 1408 VAGVIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLSDLEASK 1467
Query: 183 CVAVEDEYLLSPLNLGMIAXXXXXXXXXXXXXXXXXXXXXXXXXXXEILASASEYELPPI 362
CVA+E++ LSPLNLGMIA EILASASEY PI
Sbjct: 1468 CVAIEEDMDLSPLNLGMIASYYYISYTTIERFSSSLTSKTRMKGLLEILASASEYAQLPI 1527
Query: 363 RPGEEELI*RLISHE 407
RPGEEE++ RLI+H+
Sbjct: 1528 RPGEEEVLRRLINHQ 1542
Score = 33.9 bits (76), Expect(2) = 5e-44
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 6/39 (15%)
Frame = +1
Query: 385 YEG*SVMNPNVKANALLHAHFS------HLASDQQEVLI 483
+E +P+VKAN LL AHFS +LA DQ+EVL+
Sbjct: 1546 FENPRYSDPHVKANVLLQAHFSRHSVGGNLALDQREVLL 1584
>gb|ESW21254.1| hypothetical protein PHAVU_005G055300g [Phaseolus vulgaris]
gi|561022525|gb|ESW21255.1| hypothetical protein
PHAVU_005G055300g [Phaseolus vulgaris]
Length = 2184
Score = 164 bits (416), Expect(2) = 1e-43
Identities = 84/135 (62%), Positives = 99/135 (73%)
Frame = +3
Query: 3 VVGVIQNKQDAVDYLT*TFMYRRLTQNPNYFNLQGVSNRHLSDHLSELVENTLSDLEASK 182
V G+I+NKQDAVDYLT TFMYRRLTQNPNY+NLQGVS+RHLSDHLSE+VENTLSDLEASK
Sbjct: 1779 VAGIIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSEMVENTLSDLEASK 1838
Query: 183 CVAVEDEYLLSPLNLGMIAXXXXXXXXXXXXXXXXXXXXXXXXXXXEILASASEYELPPI 362
C+ +E++ LSPLNLGMIA EIL+SASEY PI
Sbjct: 1839 CITIEEDMDLSPLNLGMIASYYYISYTTIERFSSSVTSKTKMKGLLEILSSASEYAQLPI 1898
Query: 363 RPGEEELI*RLISHE 407
RPGEEE++ +LI+H+
Sbjct: 1899 RPGEEEVVRKLINHQ 1913
Score = 37.7 bits (86), Expect(2) = 1e-43
Identities = 21/39 (53%), Positives = 27/39 (69%), Gaps = 6/39 (15%)
Frame = +1
Query: 385 YEG*SVMNPNVKANALLHAHFS------HLASDQQEVLI 483
+E V +P+VKANALL AHFS +LA DQ+EVL+
Sbjct: 1917 FENPKVTDPHVKANALLQAHFSRQFVGGNLALDQKEVLL 1955
>ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Glycine max]
Length = 2183
Score = 164 bits (414), Expect(2) = 2e-43
Identities = 83/135 (61%), Positives = 98/135 (72%)
Frame = +3
Query: 3 VVGVIQNKQDAVDYLT*TFMYRRLTQNPNYFNLQGVSNRHLSDHLSELVENTLSDLEASK 182
V G+I+NKQDAVDYLT TFMYRRLTQNPNY+NLQGVS+RHLSDHLSE+VENTLSDLEA K
Sbjct: 1779 VAGIIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSEMVENTLSDLEAGK 1838
Query: 183 CVAVEDEYLLSPLNLGMIAXXXXXXXXXXXXXXXXXXXXXXXXXXXEILASASEYELPPI 362
C+ +ED+ L+PLNLGMIA EIL+SASEY PI
Sbjct: 1839 CITIEDDMELAPLNLGMIASYYYISYTTIERFSSSVTSKTKMKGLLEILSSASEYAQLPI 1898
Query: 363 RPGEEELI*RLISHE 407
RPGEEE++ +LI+H+
Sbjct: 1899 RPGEEEVVRKLINHQ 1913
Score = 37.7 bits (86), Expect(2) = 2e-43
Identities = 21/39 (53%), Positives = 27/39 (69%), Gaps = 6/39 (15%)
Frame = +1
Query: 385 YEG*SVMNPNVKANALLHAHFS------HLASDQQEVLI 483
+E V +P+VKANALL AHFS +LA DQ+EVL+
Sbjct: 1917 FENPKVTDPHVKANALLQAHFSRQFVGGNLALDQKEVLL 1955
>ref|XP_006849925.1| hypothetical protein AMTR_s00022p00114710 [Amborella trichopoda]
gi|548853523|gb|ERN11506.1| hypothetical protein
AMTR_s00022p00114710 [Amborella trichopoda]
Length = 2171
Score = 164 bits (416), Expect(2) = 7e-43
Identities = 87/135 (64%), Positives = 101/135 (74%)
Frame = +3
Query: 3 VVGVIQNKQDAVDYLT*TFMYRRLTQNPNYFNLQGVSNRHLSDHLSELVENTLSDLEASK 182
VVG+I++KQDAVDYLT TFMYRRL+QNPNY+NLQGVS+RHLSDHLSELVENTLS+LEASK
Sbjct: 1767 VVGIIESKQDAVDYLTWTFMYRRLSQNPNYYNLQGVSHRHLSDHLSELVENTLSNLEASK 1826
Query: 183 CVAVEDEYLLSPLNLGMIAXXXXXXXXXXXXXXXXXXXXXXXXXXXEILASASEYELPPI 362
CVA+E++ LSPLNLGMIA EILASASEY PI
Sbjct: 1827 CVAIEEDMDLSPLNLGMIASYYYISYTTIERFSSLLTAKTKLKGLIEILASASEYADLPI 1886
Query: 363 RPGEEELI*RLISHE 407
RPGEEE+I +LI+H+
Sbjct: 1887 RPGEEEMIRKLINHQ 1901
Score = 35.0 bits (79), Expect(2) = 7e-43
Identities = 18/32 (56%), Positives = 25/32 (78%), Gaps = 6/32 (18%)
Frame = +1
Query: 406 NPNVKANALLHAHFS------HLASDQQEVLI 483
+P++KANALL AHFS +LA+DQ+EVL+
Sbjct: 1912 DPHLKANALLQAHFSRHTVVGNLAADQREVLL 1943
>ref|XP_002322252.1| U5 small nuclear ribonucleoprotein helicase [Populus trichocarpa]
gi|222869248|gb|EEF06379.1| U5 small nuclear
ribonucleoprotein helicase [Populus trichocarpa]
Length = 2157
Score = 163 bits (412), Expect(2) = 5e-42
Identities = 86/135 (63%), Positives = 98/135 (72%)
Frame = +3
Query: 3 VVGVIQNKQDAVDYLT*TFMYRRLTQNPNYFNLQGVSNRHLSDHLSELVENTLSDLEASK 182
V GVI+NKQDAVDYLT TF YRRLTQNPNY+NLQGVS+RHLSDHLSELVENTL+DLE SK
Sbjct: 1752 VAGVIENKQDAVDYLTWTFTYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLTDLERSK 1811
Query: 183 CVAVEDEYLLSPLNLGMIAXXXXXXXXXXXXXXXXXXXXXXXXXXXEILASASEYELPPI 362
CVA+E++ LSPLNLGMIA EIL+SASEY PI
Sbjct: 1812 CVAIEEDMDLSPLNLGMIASYYYISYTTIERFSSSLTPKTKMKGLLEILSSASEYAQLPI 1871
Query: 363 RPGEEELI*RLISHE 407
RPGEEE++ RLI+H+
Sbjct: 1872 RPGEEEVLRRLINHQ 1886
Score = 33.9 bits (76), Expect(2) = 5e-42
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 6/39 (15%)
Frame = +1
Query: 385 YEG*SVMNPNVKANALLHAHFS------HLASDQQEVLI 483
+E +P+VKAN LL AHFS +LA DQ+EVL+
Sbjct: 1890 FENPRYADPHVKANVLLQAHFSRQSVGGNLALDQREVLL 1928
>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Vitis
vinifera]
Length = 2177
Score = 174 bits (441), Expect = 1e-41
Identities = 98/159 (61%), Positives = 108/159 (67%), Gaps = 6/159 (3%)
Frame = +3
Query: 3 VVGVIQNKQDAVDYLT*TFMYRRLTQNPNYFNLQGVSNRHLSDHLSELVENTLSDLEASK 182
VVGVI+NKQDAVDYLT TFMYRRLTQNPNY+NLQGVS+RHLSDHLSE VENTLSDLEASK
Sbjct: 1775 VVGVIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSESVENTLSDLEASK 1834
Query: 183 CVAVEDEYLLSPLNLGMIAXXXXXXXXXXXXXXXXXXXXXXXXXXXEILASASEYELPPI 362
CVA+ED+ LSPLNLGMIA EILASASEY PI
Sbjct: 1835 CVAIEDDMDLSPLNLGMIASYYYISYTTIERFSSSLTSKTKMKGLLEILASASEYAQIPI 1894
Query: 363 RPGEEELI*RLISHE------PKCEGKCSVTRSLLSSGF 461
RPGEE+LI RLI+H+ PKC +LL + F
Sbjct: 1895 RPGEEDLIRRLINHQRFSFENPKCTDPHIKANALLQAHF 1933
>emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]
Length = 2144
Score = 174 bits (441), Expect = 1e-41
Identities = 98/159 (61%), Positives = 108/159 (67%), Gaps = 6/159 (3%)
Frame = +3
Query: 3 VVGVIQNKQDAVDYLT*TFMYRRLTQNPNYFNLQGVSNRHLSDHLSELVENTLSDLEASK 182
VVGVI+NKQDAVDYLT TFMYRRLTQNPNY+NLQGVS+RHLSDHLSE VENTLSDLEASK
Sbjct: 1742 VVGVIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSESVENTLSDLEASK 1801
Query: 183 CVAVEDEYLLSPLNLGMIAXXXXXXXXXXXXXXXXXXXXXXXXXXXEILASASEYELPPI 362
CVA+ED+ LSPLNLGMIA EILASASEY PI
Sbjct: 1802 CVAIEDDMDLSPLNLGMIASYYYISYTTIERFSSSLTSKTKMKGLLEILASASEYAQIPI 1861
Query: 363 RPGEEELI*RLISHE------PKCEGKCSVTRSLLSSGF 461
RPGEE+LI RLI+H+ PKC +LL + F
Sbjct: 1862 RPGEEDLIRRLINHQRFSFENPKCTDPHIKANALLQAHF 1900
>ref|XP_006480405.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
isoform X1 [Citrus sinensis]
gi|568853532|ref|XP_006480406.1| PREDICTED: U5 small
nuclear ribonucleoprotein 200 kDa helicase-like isoform
X2 [Citrus sinensis]
Length = 2179
Score = 160 bits (406), Expect(2) = 2e-41
Identities = 84/135 (62%), Positives = 96/135 (71%)
Frame = +3
Query: 3 VVGVIQNKQDAVDYLT*TFMYRRLTQNPNYFNLQGVSNRHLSDHLSELVENTLSDLEASK 182
V GVI+NKQDAVDYLT TFMYRRLTQNPNY+NLQGVS+RHLSDHLSELVENT+SDLEASK
Sbjct: 1781 VAGVIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTISDLEASK 1840
Query: 183 CVAVEDEYLLSPLNLGMIAXXXXXXXXXXXXXXXXXXXXXXXXXXXEILASASEYELPPI 362
C+ +E++ LSP N GMIA E+LASASEY PI
Sbjct: 1841 CIIIEEDMDLSPSNHGMIASYYYISYTTIERFSSSLTPKTRMKGLLEVLASASEYAQLPI 1900
Query: 363 RPGEEELI*RLISHE 407
RPGEEE++ RLI H+
Sbjct: 1901 RPGEEEVVRRLIHHQ 1915
Score = 34.3 bits (77), Expect(2) = 2e-41
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 6/39 (15%)
Frame = +1
Query: 385 YEG*SVMNPNVKANALLHAHFS------HLASDQQEVLI 483
+E +P+VKANALL AHFS +L DQ+EVL+
Sbjct: 1919 FENPKFTDPHVKANALLQAHFSRQQVGGNLKLDQEEVLL 1957
>ref|XP_002318725.2| U5 small nuclear ribonucleoprotein helicase [Populus trichocarpa]
gi|550326778|gb|EEE96945.2| U5 small nuclear
ribonucleoprotein helicase [Populus trichocarpa]
Length = 2186
Score = 165 bits (418), Expect(2) = 2e-41
Identities = 87/135 (64%), Positives = 99/135 (73%)
Frame = +3
Query: 3 VVGVIQNKQDAVDYLT*TFMYRRLTQNPNYFNLQGVSNRHLSDHLSELVENTLSDLEASK 182
V GVI+NKQDAVDYLT TFMYRRLTQNPNY+NLQGVS+RHLSDHLSELVENTL+DLE SK
Sbjct: 1782 VAGVIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLADLEKSK 1841
Query: 183 CVAVEDEYLLSPLNLGMIAXXXXXXXXXXXXXXXXXXXXXXXXXXXEILASASEYELPPI 362
CVA+ED+ LSPLNLGMIA EIL+SASEY PI
Sbjct: 1842 CVAIEDDMDLSPLNLGMIASCYYISYTTIERFSSSLTPKTKMKGLLEILSSASEYVQLPI 1901
Query: 363 RPGEEELI*RLISHE 407
+PGEEE++ RLI+H+
Sbjct: 1902 QPGEEEMLRRLINHQ 1916
Score = 29.3 bits (64), Expect(2) = 2e-41
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 6/39 (15%)
Frame = +1
Query: 385 YEG*SVMNPNVKANALLHAHFS------HLASDQQEVLI 483
+E + +VKAN LL AHFS +LA +Q+EVL+
Sbjct: 1920 FENPRYADAHVKANVLLQAHFSRQSVGGNLALEQREVLL 1958
>ref|XP_002966396.1| hypothetical protein SELMODRAFT_144158 [Selaginella moellendorffii]
gi|300165816|gb|EFJ32423.1| hypothetical protein
SELMODRAFT_144158 [Selaginella moellendorffii]
Length = 2164
Score = 160 bits (404), Expect(2) = 3e-41
Identities = 82/135 (60%), Positives = 98/135 (72%)
Frame = +3
Query: 3 VVGVIQNKQDAVDYLT*TFMYRRLTQNPNYFNLQGVSNRHLSDHLSELVENTLSDLEASK 182
VV I+NKQDAVDYLT T MYRRLTQNPNY+NLQGVS+RHLSDHLSELVE+TL+DLE+SK
Sbjct: 1759 VVHTIENKQDAVDYLTWTLMYRRLTQNPNYYNLQGVSHRHLSDHLSELVESTLNDLESSK 1818
Query: 183 CVAVEDEYLLSPLNLGMIAXXXXXXXXXXXXXXXXXXXXXXXXXXXEILASASEYELPPI 362
C+AVED+ LSPLNLGMIA EILASASEY P+
Sbjct: 1819 CIAVEDDMELSPLNLGMIASYYYIRYTTIELFSNSLTAKTKMKGLLEILASASEYATLPV 1878
Query: 363 RPGEEELI*RLISHE 407
RPGEE+++ +L++H+
Sbjct: 1879 RPGEEDIVRKLVNHQ 1893
Score = 34.3 bits (77), Expect(2) = 3e-41
Identities = 18/32 (56%), Positives = 24/32 (75%), Gaps = 6/32 (18%)
Frame = +1
Query: 406 NPNVKANALLHAHFS------HLASDQQEVLI 483
+P++KANALL AHFS +LA DQ+EVL+
Sbjct: 1904 DPHLKANALLQAHFSRHPVPGNLAMDQREVLL 1935
>ref|XP_002978166.1| hypothetical protein SELMODRAFT_108064 [Selaginella moellendorffii]
gi|300154187|gb|EFJ20823.1| hypothetical protein
SELMODRAFT_108064 [Selaginella moellendorffii]
Length = 2164
Score = 160 bits (404), Expect(2) = 3e-41
Identities = 82/135 (60%), Positives = 98/135 (72%)
Frame = +3
Query: 3 VVGVIQNKQDAVDYLT*TFMYRRLTQNPNYFNLQGVSNRHLSDHLSELVENTLSDLEASK 182
VV I+NKQDAVDYLT T MYRRLTQNPNY+NLQGVS+RHLSDHLSELVE+TL+DLE+SK
Sbjct: 1759 VVHTIENKQDAVDYLTWTLMYRRLTQNPNYYNLQGVSHRHLSDHLSELVESTLNDLESSK 1818
Query: 183 CVAVEDEYLLSPLNLGMIAXXXXXXXXXXXXXXXXXXXXXXXXXXXEILASASEYELPPI 362
C+AVED+ LSPLNLGMIA EILASASEY P+
Sbjct: 1819 CIAVEDDMELSPLNLGMIASYYYIRYTTIELFSNSLTAKTKMKGLLEILASASEYATLPV 1878
Query: 363 RPGEEELI*RLISHE 407
RPGEE+++ +L++H+
Sbjct: 1879 RPGEEDIVRKLVNHQ 1893
Score = 34.3 bits (77), Expect(2) = 3e-41
Identities = 18/32 (56%), Positives = 24/32 (75%), Gaps = 6/32 (18%)
Frame = +1
Query: 406 NPNVKANALLHAHFS------HLASDQQEVLI 483
+P++KANALL AHFS +LA DQ+EVL+
Sbjct: 1904 DPHLKANALLQAHFSRHPVPGNLAMDQREVLL 1935
>ref|XP_001757495.1| predicted protein [Physcomitrella patens] gi|162691189|gb|EDQ77552.1|
predicted protein [Physcomitrella patens]
Length = 2180
Score = 160 bits (404), Expect(2) = 7e-41
Identities = 84/135 (62%), Positives = 98/135 (72%)
Frame = +3
Query: 3 VVGVIQNKQDAVDYLT*TFMYRRLTQNPNYFNLQGVSNRHLSDHLSELVENTLSDLEASK 182
VV I+NKQDAVDYLT TFMYRRLTQNPNY+NLQGVS+RHLSDHLSELVE+TLSDLE+SK
Sbjct: 1773 VVRTIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVESTLSDLESSK 1832
Query: 183 CVAVEDEYLLSPLNLGMIAXXXXXXXXXXXXXXXXXXXXXXXXXXXEILASASEYELPPI 362
CVA+ED+ LSPLNLGMIA EIL++ASEY P+
Sbjct: 1833 CVAIEDDMDLSPLNLGMIAAYYYISYTTIELFSSSLTAKTKLKGLLEILSNASEYTRLPM 1892
Query: 363 RPGEEELI*RLISHE 407
RPGE+ELI +L+ H+
Sbjct: 1893 RPGEDELIRKLVMHQ 1907
Score = 33.1 bits (74), Expect(2) = 7e-41
Identities = 17/32 (53%), Positives = 24/32 (75%), Gaps = 6/32 (18%)
Frame = +1
Query: 406 NPNVKANALLHAHFS------HLASDQQEVLI 483
+P+VKANALL AHF+ +LA DQ+++LI
Sbjct: 1918 DPHVKANALLQAHFARHSVSGNLALDQRDILI 1949
>ref|XP_006295588.1| hypothetical protein CARUB_v10024696mg [Capsella rubella]
gi|482564296|gb|EOA28486.1| hypothetical protein
CARUB_v10024696mg [Capsella rubella]
Length = 2176
Score = 157 bits (398), Expect(2) = 8e-41
Identities = 81/133 (60%), Positives = 96/133 (72%)
Frame = +3
Query: 9 GVIQNKQDAVDYLT*TFMYRRLTQNPNYFNLQGVSNRHLSDHLSELVENTLSDLEASKCV 188
GVI+NKQ+AVDYLT +FMYRRL QNPNY+NLQGV++RHLSDHLSELVENTLSDLE SKC+
Sbjct: 1774 GVIENKQNAVDYLTWSFMYRRLPQNPNYYNLQGVTHRHLSDHLSELVENTLSDLEVSKCI 1833
Query: 189 AVEDEYLLSPLNLGMIAXXXXXXXXXXXXXXXXXXXXXXXXXXXEILASASEYELPPIRP 368
+E+E LSPLNLG+IA EIL SASEY+L PIRP
Sbjct: 1834 EIENELDLSPLNLGIIASYYYINYTTIERFSSLLASKTKMKGLIEILTSASEYDLTPIRP 1893
Query: 369 GEEELI*RLISHE 407
GEE+ + RLI+H+
Sbjct: 1894 GEEDAVRRLINHQ 1906
Score = 35.0 bits (79), Expect(2) = 8e-41
Identities = 19/32 (59%), Positives = 23/32 (71%), Gaps = 6/32 (18%)
Frame = +1
Query: 406 NPNVKANALLHAHFS------HLASDQQEVLI 483
+P+VKANALL AHFS +LA DQ EVL+
Sbjct: 1917 DPHVKANALLQAHFSRQNLSGNLAMDQHEVLL 1948
>ref|NP_173520.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis
thaliana] gi|334182730|ref|NP_001185050.1| putative U5
small nuclear ribonucleoprotein helicase [Arabidopsis
thaliana] gi|4836892|gb|AAD30595.1|AC007369_5 Putative
RNA helicase [Arabidopsis thaliana]
gi|332191925|gb|AEE30046.1| putative U5 small nuclear
ribonucleoprotein helicase [Arabidopsis thaliana]
gi|332191926|gb|AEE30047.1| putative U5 small nuclear
ribonucleoprotein helicase [Arabidopsis thaliana]
Length = 2171
Score = 171 bits (433), Expect = 9e-41
Identities = 94/159 (59%), Positives = 106/159 (66%), Gaps = 6/159 (3%)
Frame = +3
Query: 3 VVGVIQNKQDAVDYLT*TFMYRRLTQNPNYFNLQGVSNRHLSDHLSELVENTLSDLEASK 182
V GVI+NKQDAVDYLT TFMYRRL QNPNY+NLQGVS+RHLSDHLSELVENTLSDLEASK
Sbjct: 1768 VAGVIENKQDAVDYLTWTFMYRRLPQNPNYYNLQGVSHRHLSDHLSELVENTLSDLEASK 1827
Query: 183 CVAVEDEYLLSPLNLGMIAXXXXXXXXXXXXXXXXXXXXXXXXXXXEILASASEYELPPI 362
C+ VEDE LSPLNLGMIA EIL SASEY++ PI
Sbjct: 1828 CIEVEDEMELSPLNLGMIASYYYISYTTIERFSSLLSSKTKMKGLLEILTSASEYDMIPI 1887
Query: 363 RPGEEELI*RLISHE------PKCEGKCSVTRSLLSSGF 461
RPGEE+ + RLI+H+ PKC +LL + F
Sbjct: 1888 RPGEEDTVRRLINHQRFSFENPKCTDPHVKANALLQAHF 1926
>gb|AAL31915.1|AF419583_1 At1g20960/F9H16_5 [Arabidopsis thaliana] gi|21360465|gb|AAM47348.1|
At1g20960/F9H16_5 [Arabidopsis thaliana]
Length = 569
Score = 171 bits (433), Expect = 9e-41
Identities = 94/159 (59%), Positives = 106/159 (66%), Gaps = 6/159 (3%)
Frame = +3
Query: 3 VVGVIQNKQDAVDYLT*TFMYRRLTQNPNYFNLQGVSNRHLSDHLSELVENTLSDLEASK 182
V GVI+NKQDAVDYLT TFMYRRL QNPNY+NLQGVS+RHLSDHLSELVENTLSDLEASK
Sbjct: 166 VAGVIENKQDAVDYLTWTFMYRRLPQNPNYYNLQGVSHRHLSDHLSELVENTLSDLEASK 225
Query: 183 CVAVEDEYLLSPLNLGMIAXXXXXXXXXXXXXXXXXXXXXXXXXXXEILASASEYELPPI 362
C+ VEDE LSPLNLGMIA EIL SASEY++ PI
Sbjct: 226 CIEVEDEMELSPLNLGMIASYYYISYTTIERFSSLLSSKTKMKGLLEILTSASEYDMIPI 285
Query: 363 RPGEEELI*RLISHE------PKCEGKCSVTRSLLSSGF 461
RPGEE+ + RLI+H+ PKC +LL + F
Sbjct: 286 RPGEEDTVRRLINHQRFSFENPKCTDPHVKANALLQAHF 324