BLASTX nr result

ID: Rehmannia24_contig00000430 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00000430
         (477 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS59907.1| hypothetical protein M569_14900, partial [Genlise...    73   5e-11
ref|XP_006343910.1| PREDICTED: GDT1-like protein 1, chloroplasti...    67   2e-09
ref|XP_004245555.1| PREDICTED: GDT1-like protein 1, chloroplasti...    64   3e-08
ref|XP_002304531.2| hypothetical protein POPTR_0003s13410g [Popu...    62   6e-08
ref|XP_004173588.1| PREDICTED: GDT1-like protein 1, chloroplasti...    59   7e-07
ref|XP_004143960.1| PREDICTED: GDT1-like protein 1, chloroplasti...    59   7e-07

>gb|EPS59907.1| hypothetical protein M569_14900, partial [Genlisea aurea]
          Length = 87

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 40/66 (60%), Positives = 49/66 (74%)
 Frame = -2

Query: 200 LNESMKKCATLLDYRVQNAPSLSYLKLMLMCGFFTLQTTQQALAGSDVTSSLQSFSFLGD 21
           L+ S++K  T  D+  Q      +LKL+L+CGFFTLQTTQQA AG DV S+LQ+FSFLGD
Sbjct: 3   LSMSIRKNKT--DFCNQVCTKPHHLKLLLLCGFFTLQTTQQATAGVDVASNLQAFSFLGD 60

Query: 20  LDDIST 3
           L DIST
Sbjct: 61  LGDIST 66


>ref|XP_006343910.1| PREDICTED: GDT1-like protein 1, chloroplastic-like [Solanum
           tuberosum]
          Length = 361

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 50/134 (37%), Positives = 69/134 (51%)
 Frame = -2

Query: 404 PCFSFYFPPQYHFSRKIFAGKPSYGSQIPSFTAVASKKELMTTKEKCYNCTPSPHTSKIC 225
           P FS   PP    SR  F+ + S   Q+  F  + SK       ++CY  T S +    C
Sbjct: 22  PNFSPANPPLIAISR--FSRRHSLCKQLGWFEDI-SKVVRTRNYKRCY-ITRSAYGVDEC 77

Query: 224 SSTGKLTLLNESMKKCATLLDYRVQNAPSLSYLKLMLMCGFFTLQTTQQALAGSDVTSSL 45
           SST +  LL    +  +     +V + P  +YLK +++ G FTL  TQQA A S+V + L
Sbjct: 78  SSTNRTALLKRKNQSTSV----QVLDMPENNYLKAVVLSGLFTLLFTQQASAASEVATGL 133

Query: 44  QSFSFLGDLDDIST 3
           QSF F GDL D+ST
Sbjct: 134 QSFPFFGDLGDLST 147


>ref|XP_004245555.1| PREDICTED: GDT1-like protein 1, chloroplastic-like [Solanum
           lycopersicum]
          Length = 362

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 52/164 (31%), Positives = 72/164 (43%), Gaps = 17/164 (10%)
 Frame = -2

Query: 443 SLPWSCHSDHRNNPCFSFYFPPQYHFSRKIFAGKPSYGSQIPSFTAVAS----------- 297
           SL  SC S        SF F P +  S        ++    PS TA++            
Sbjct: 3   SLVLSCESS-------SFLFKPSFALS--------NFSPVNPSLTAISRFSRRHSLCKQH 47

Query: 296 ------KKELMTTKEKCYNCTPSPHTSKICSSTGKLTLLNESMKKCATLLDYRVQNAPSL 135
                  K + T   K  + T S +  + CS T K  L     +  + L   +V + P  
Sbjct: 48  GWSEDFPKVVRTRNYKRCHMTRSAYCDEECSITNKTALSKRKNQSTSVL---QVLDMPEN 104

Query: 134 SYLKLMLMCGFFTLQTTQQALAGSDVTSSLQSFSFLGDLDDIST 3
           +YLK +++ G FTL  TQQA A S+V + LQSF F GDL D+ST
Sbjct: 105 NYLKSIVLSGLFTLLFTQQASAASEVATGLQSFPFFGDLGDLST 148


>ref|XP_002304531.2| hypothetical protein POPTR_0003s13410g [Populus trichocarpa]
           gi|550343097|gb|EEE79510.2| hypothetical protein
           POPTR_0003s13410g [Populus trichocarpa]
          Length = 457

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 43/141 (30%), Positives = 76/141 (53%), Gaps = 13/141 (9%)
 Frame = -2

Query: 386 FPPQYHFSRKIFAGKPSYGSQIPSFTAVASKKELMTTKEKCYNCTPSPHTS--------- 234
           F P   FS+K  + K SYG+      +  S++  + + E+ +    S H+          
Sbjct: 30  FLPLNSFSKKHNSSKLSYGNHPSFIFSRFSRQCCVNSFEETFGLVLSKHSKNRDGLGLRD 89

Query: 233 ---KICSSTGKLTLLNESMKKCATLLDYRVQNAPSLS-YLKLMLMCGFFTLQTTQQALAG 66
              K   +T     +   +KK ++  ++ V +APS   +LK++L+ G+ TLQ ++ A+AG
Sbjct: 90  LGCKNYQNTTGTVSVKSLVKKKSSRENHTVASAPSNGGFLKILLIFGYLTLQGSRPAVAG 149

Query: 65  SDVTSSLQSFSFLGDLDDIST 3
           +D++++LQS  +LGDL DIST
Sbjct: 150 TDISTALQSIPYLGDLGDIST 170


>ref|XP_004173588.1| PREDICTED: GDT1-like protein 1, chloroplastic-like, partial
           [Cucumis sativus]
          Length = 234

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 30/46 (65%), Positives = 34/46 (73%)
 Frame = -2

Query: 140 SLSYLKLMLMCGFFTLQTTQQALAGSDVTSSLQSFSFLGDLDDIST 3
           S S+LK ML+ GFF LQ +Q ALAGSDV + LQS   LGDL DIST
Sbjct: 81  SSSFLKFMLLSGFFILQDSQHALAGSDVATGLQSVPLLGDLGDIST 126


>ref|XP_004143960.1| PREDICTED: GDT1-like protein 1, chloroplastic-like, partial
           [Cucumis sativus]
          Length = 342

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 30/46 (65%), Positives = 34/46 (73%)
 Frame = -2

Query: 140 SLSYLKLMLMCGFFTLQTTQQALAGSDVTSSLQSFSFLGDLDDIST 3
           S S+LK ML+ GFF LQ +Q ALAGSDV + LQS   LGDL DIST
Sbjct: 83  SSSFLKFMLLSGFFILQDSQHALAGSDVATGLQSVPLLGDLGDIST 128


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