BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00000343
         (739 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268...   255   1e-65
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   246   7e-63
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   240   4e-61
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                233   6e-59
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664...   232   1e-58
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298...   231   2e-58
gb|ABD96948.1| hypothetical protein [Cleome spinosa]                  226   8e-57
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   225   1e-56
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]             224   2e-56
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...   223   4e-56
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   222   9e-56
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta...   222   1e-55
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]               220   4e-55
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   219   7e-55
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           219   7e-55
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...   216   6e-54
emb|CAB72467.1| putative protein [Arabidopsis thaliana]               215   1e-53
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...   213   4e-53
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...   213   5e-53
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...   211   2e-52

>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
            lycopersicum]
          Length = 717

 Score =  255 bits (651), Expect = 1e-65
 Identities = 119/245 (48%), Positives = 169/245 (68%)
 Frame = -3

Query: 737  DNIFLSQEILRNYARKRISPRCTIKVDLQKAYDTVSWSFLQDVLSGLGFPNLFISWIMEC 558
            DNI L+ E+++ Y RK +SPRC +K+DL KAYD+V W FL+ V+ GLGFP+LF  W+M+C
Sbjct: 366  DNIILAHELVKAYTRKNVSPRCMLKIDLHKAYDSVEWPFLEQVMEGLGFPDLFTKWVMKC 425

Query: 557  VTSASFSISLNGSLHGKFPGKRGLRQGDPMSPALFLLCMEYLSRLINLRTSTHTFKYHPR 378
            V + +++I +NG    +F   +GLRQGDPMSP LF + MEYLSRL+       +FKYHP+
Sbjct: 426  VKTVNYTIVVNGQNTQRFDAAKGLRQGDPMSPFLFAIAMEYLSRLLKGLKEDKSFKYHPK 485

Query: 377  CQELKISHLIFADDLMLFAKGDTHSIKILIDCLDEFRIVSGLNINSSKSNIFTAGIFGKD 198
              +L ++HL FADDL+LF++GD +SIK L  C  EF   SGL  N +KS+I+  G+  + 
Sbjct: 486  YAKLDVTHLCFADDLLLFSRGDLNSIKALQKCFTEFSQASGLQANLNKSSIYCGGVQMEV 545

Query: 197  LDDILDLVNYPKGTLPVRYLGVPLAAQKLNCVHYAPLHDRIAAYIDKWTANSLSYAGRLL 18
               I+  + Y    LP +YLGVPL+++KLN + + PL +++ A I+ WTA  LSYAGR  
Sbjct: 546  RQQIIQQLGYTIEELPFKYLGVPLSSKKLNTIQWYPLIEKVMARINSWTAKKLSYAGRAQ 605

Query: 17   LIKSV 3
            L+K+V
Sbjct: 606  LVKTV 610


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  246 bits (627), Expect = 7e-63
 Identities = 117/245 (47%), Positives = 164/245 (66%)
 Frame = -3

Query: 737  DNIFLSQEILRNYARKRISPRCTIKVDLQKAYDTVSWSFLQDVLSGLGFPNLFISWIMEC 558
            DNI L+ E++R Y R+ +SPRC IKVD++KAYD+V W FL+ +L  LGFP++FI WIM C
Sbjct: 561  DNILLATELIRGYNRRHVSPRCVIKVDIRKAYDSVEWVFLESMLKELGFPSMFIRWIMAC 620

Query: 557  VTSASFSISLNGSLHGKFPGKRGLRQGDPMSPALFLLCMEYLSRLINLRTSTHTFKYHPR 378
            V + S+SI LNG     F  ++GLRQGDP+SP LF L MEYLSR +        F +HP+
Sbjct: 621  VKTVSYSILLNGIPSIPFDAQKGLRQGDPLSPFLFALSMEYLSRCMGNMCKDPEFNFHPK 680

Query: 377  CQELKISHLIFADDLMLFAKGDTHSIKILIDCLDEFRIVSGLNINSSKSNIFTAGIFGKD 198
            C+ +K++HL+FADDL++FA+ D  SI  ++   + F   SGL  +  KS I+  G+  ++
Sbjct: 681  CERIKLTHLMFADDLLMFARADASSISKIMAAFNSFSKASGLQASIEKSCIYFGGVCHEE 740

Query: 197  LDDILDLVNYPKGTLPVRYLGVPLAAQKLNCVHYAPLHDRIAAYIDKWTANSLSYAGRLL 18
             + + D +  P G+LP RYLGVPLA++KLN     PL D+I      W A+ LSYAGRL 
Sbjct: 741  AEQLADRIQMPIGSLPFRYLGVPLASKKLNFSQCKPLIDKITTRAQGWVAHLLSYAGRLQ 800

Query: 17   LIKSV 3
            L+K++
Sbjct: 801  LVKTI 805


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  240 bits (612), Expect = 4e-61
 Identities = 116/245 (47%), Positives = 159/245 (64%)
 Frame = -3

Query: 737  DNIFLSQEILRNYARKRISPRCTIKVDLQKAYDTVSWSFLQDVLSGLGFPNLFISWIMEC 558
            DNI L+ E++R Y RK +SPRC +KVD++KAYD+V WSFL+ +L   GFP+ F+ WIMEC
Sbjct: 558  DNILLASELIRGYTRKHMSPRCIMKVDIRKAYDSVEWSFLETLLYEFGFPSRFVGWIMEC 617

Query: 557  VTSASFSISLNGSLHGKFPGKRGLRQGDPMSPALFLLCMEYLSRLINLRTSTHTFKYHPR 378
            V++ S+S+ +NG     F  ++GLRQGDPMSP LF LCMEYLSR +     +  F +HP+
Sbjct: 618  VSTVSYSVLVNGIPTQPFQARKGLRQGDPMSPFLFALCMEYLSRCLEELKGSPDFNFHPK 677

Query: 377  CQELKISHLIFADDLMLFAKGDTHSIKILIDCLDEFRIVSGLNINSSKSNIFTAGIFGKD 198
            C+ L I+HL+FADDL++F + D  S+  +     +F   SGL  +  KSNI+  G+  + 
Sbjct: 678  CERLNITHLMFADDLLMFCRADKSSLDHMNVAFQKFSHASGLAASHEKSNIYFCGVDDET 737

Query: 197  LDDILDLVNYPKGTLPVRYLGVPLAAQKLNCVHYAPLHDRIAAYIDKWTANSLSYAGRLL 18
              ++ D V+   G LP RYLGVPL ++KL      PL + I      W A  LSYAGRL 
Sbjct: 738  ARELADYVHMQLGELPFRYLGVPLTSKKLTYAQCKPLVEMITNRAQTWMAKLLSYAGRLQ 797

Query: 17   LIKSV 3
            LIKS+
Sbjct: 798  LIKSI 802


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score =  233 bits (593), Expect = 6e-59
 Identities = 109/245 (44%), Positives = 162/245 (66%)
 Frame = -3

Query: 737 DNIFLSQEILRNYARKRISPRCTIKVDLQKAYDTVSWSFLQDVLSGLGFPNLFISWIMEC 558
           +N+ L+ E++++Y +  ISPRC +K+D+ KA+D+V W FL + L  L FP  F  WI  C
Sbjct: 146 ENVLLATELVKDYHKDSISPRCAMKIDISKAFDSVQWQFLLNTLEALNFPENFCHWIKLC 205

Query: 557 VTSASFSISLNGSLHGKFPGKRGLRQGDPMSPALFLLCMEYLSRLINLRTSTHTFKYHPR 378
           +++A+FS+ +NG L G F  KRGLRQG  +SP LF++CM  LS +I++        YHP+
Sbjct: 206 ISTATFSVQVNGELAGFFGSKRGLRQGCALSPYLFVICMNVLSHMIDVAAVHRNIGYHPK 265

Query: 377 CQELKISHLIFADDLMLFAKGDTHSIKILIDCLDEFRIVSGLNINSSKSNIFTAGIFGKD 198
           C++L ++HL FADDLM+F  G   S++ +I+   EF   SGL+I+  KS ++ AG+   +
Sbjct: 266 CKKLSLTHLCFADDLMVFIDGQQRSVEGVINIFKEFAGKSGLHISLEKSTLYLAGVSELN 325

Query: 197 LDDILDLVNYPKGTLPVRYLGVPLAAQKLNCVHYAPLHDRIAAYIDKWTANSLSYAGRLL 18
            ++IL    +  G LPVRYLG+PL  +++    Y+PL D++ + I  WTA SLSYAGRL 
Sbjct: 326 RNNILSAFPFASGQLPVRYLGLPLLTKQMTTADYSPLLDKVRSKISSWTARSLSYAGRLA 385

Query: 17  LIKSV 3
           LI SV
Sbjct: 386 LINSV 390


>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
          Length = 939

 Score =  232 bits (591), Expect = 1e-58
 Identities = 108/245 (44%), Positives = 166/245 (67%)
 Frame = -3

Query: 737  DNIFLSQEILRNYARKRISPRCTIKVDLQKAYDTVSWSFLQDVLSGLGFPNLFISWIMEC 558
            D++ L+ E+LR Y RK  +P+C +++D+QKAYDTV W  L+ +L  LGFP+ FI WIM  
Sbjct: 386  DHVMLAFELLRGYERKHGTPKCMLQIDIQKAYDTVHWDALEHILRELGFPDQFIKWIMIA 445

Query: 557  VTSASFSISLNGSLHGKFPGKRGLRQGDPMSPALFLLCMEYLSRLINLRTSTHTFKYHPR 378
            V S ++  ++NG    +   +RG+RQGDP+SP LF+L MEYL+R+++       F YH +
Sbjct: 446  VRSVTYVFNINGRFTRRLEARRGIRQGDPISPLLFILVMEYLNRILSQLDKIPNFNYHSK 505

Query: 377  CQELKISHLIFADDLMLFAKGDTHSIKILIDCLDEFRIVSGLNINSSKSNIFTAGIFGKD 198
            C+++KI++L FADDL+LF++GD  S++I++D  + F    GL++N SK NI+   +    
Sbjct: 506  CEKMKITNLCFADDLLLFSRGDIGSVQIMLDKFNTFLRSMGLHVNPSKCNIYCGSVDINV 565

Query: 197  LDDILDLVNYPKGTLPVRYLGVPLAAQKLNCVHYAPLHDRIAAYIDKWTANSLSYAGRLL 18
             + +L +  + +G +P RYLG+PL+++KLN  HY  L D+I   I  W+A  LSYAGR+ 
Sbjct: 566  KEQLLLISGFKEGKMPFRYLGIPLSSKKLNIKHYQVLIDKIVGRITHWSAGLLSYAGRVQ 625

Query: 17   LIKSV 3
            LI+SV
Sbjct: 626  LIQSV 630


>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
            subsp. vesca]
          Length = 958

 Score =  231 bits (589), Expect = 2e-58
 Identities = 117/246 (47%), Positives = 152/246 (61%), Gaps = 1/246 (0%)
 Frame = -3

Query: 737  DNIFLSQEILRNYARKRISPRCTIKVDLQKAYDTVSWSFLQDVLSGLGFPNLFISWIMEC 558
            DNI L+QEI+ +Y +    PRCT  VD+ KA DTV W F+   L     P+  I WI  C
Sbjct: 394  DNILLAQEIICDYHKADGQPRCTFMVDMMKANDTVEWDFIIATLQAFNIPSTLIGWIKSC 453

Query: 557  VTSASFSISLNGSLHGKFPGKRGLRQGDPMSPALFLLCMEYLSRLINLRTS-THTFKYHP 381
            ++SA FS+ +NG L G F  +RGLRQGDP+SP LF++ ME LS  I  R + +  F+YH 
Sbjct: 454  ISSAKFSVCVNGELAGFFARRRGLRQGDPLSPYLFVIAMEVLSLCIQRRINCSPCFRYHW 513

Query: 380  RCQELKISHLIFADDLMLFAKGDTHSIKILIDCLDEFRIVSGLNINSSKSNIFTAGIFGK 201
            RC +L +SHL FADDL++F  GD +S++ L D    F  +S L  N S+S IF AG+ G 
Sbjct: 514  RCDQLNLSHLCFADDLLMFCNGDENSVRTLHDAFSNFESLSSLKANVSESKIFLAGVDGN 573

Query: 200  DLDDILDLVNYPKGTLPVRYLGVPLAAQKLNCVHYAPLHDRIAAYIDKWTANSLSYAGRL 21
              D +L + N+  GT PVRYLG+PL   KL     +PL DRI   I  W    LS+AGRL
Sbjct: 574  SSDSVLQVTNFSLGTCPVRYLGIPLITSKLRMQDCSPLLDRIETRIKSWENKVLSFAGRL 633

Query: 20   LLIKSV 3
             LI+SV
Sbjct: 634  QLIQSV 639


>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
          Length = 539

 Score =  226 bits (575), Expect = 8e-57
 Identities = 105/245 (42%), Positives = 156/245 (63%)
 Frame = -3

Query: 737 DNIFLSQEILRNYARKRISPRCTIKVDLQKAYDTVSWSFLQDVLSGLGFPNLFISWIMEC 558
           +N+ L+ E++  Y R   S R  +K+DL+KA+DTVSW F+  ++  L  P  F++W+  C
Sbjct: 20  ENVLLATELVHEYNRPNTSKRAMLKIDLRKAFDTVSWEFITKIMQALNLPRTFVTWVKVC 79

Query: 557 VTSASFSISLNGSLHGKFPGKRGLRQGDPMSPALFLLCMEYLSRLINLRTSTHTFKYHPR 378
           + +  FS+S+NG L G F G+RGLRQGDP+SP LF++ ME LSR+++   +      HP+
Sbjct: 80  METPKFSVSINGELAGYFKGRRGLRQGDPLSPYLFIMSMEVLSRMLDRCAAESRLSLHPK 139

Query: 377 CQELKISHLIFADDLMLFAKGDTHSIKILIDCLDEFRIVSGLNINSSKSNIFTAGIFGKD 198
           C    I+HL FADD+M+F  G+T S+  + + LD F   SGL +N+ K+ IF  G+ G +
Sbjct: 140 CHSPVITHLAFADDIMIFTSGETRSLLEVKNTLDSFSRASGLYLNTEKTEIFLRGLNGTE 199

Query: 197 LDDILDLVNYPKGTLPVRYLGVPLAAQKLNCVHYAPLHDRIAAYIDKWTANSLSYAGRLL 18
              +  ++ + +G LPVRYLGV L+  +L    Y PL DR+ A I+ WT   LSYAGRL 
Sbjct: 200 ASTLCAVIGFTRGYLPVRYLGVSLSPVRLTKSDYQPLLDRVKAKINSWTTRYLSYAGRLQ 259

Query: 17  LIKSV 3
           L+ +V
Sbjct: 260 LVGTV 264


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  225 bits (573), Expect = 1e-56
 Identities = 108/245 (44%), Positives = 160/245 (65%)
 Frame = -3

Query: 737  DNIFLSQEILRNYARKRISPRCTIKVDLQKAYDTVSWSFLQDVLSGLGFPNLFISWIMEC 558
            +N+ L+ E++++Y +  IS RC IK+D+ KA+D+V W FL +V + LGFP  FI WI  C
Sbjct: 573  ENLLLATELVKDYHKDTISTRCAIKIDISKAFDSVQWPFLINVFTILGFPREFIHWINIC 632

Query: 557  VTSASFSISLNGSLHGKFPGKRGLRQGDPMSPALFLLCMEYLSRLINLRTSTHTFKYHPR 378
            +T+ASFS+ +NG L G F   RGLRQG  +SP LF++CM+ LS++++   +   F YHP+
Sbjct: 633  ITTASFSVQVNGELAGYFQSSRGLRQGCALSPYLFVICMDVLSKMLDKAAAARHFGYHPK 692

Query: 377  CQELKISHLIFADDLMLFAKGDTHSIKILIDCLDEFRIVSGLNINSSKSNIFTAGIFGKD 198
            C+ + ++HL FADDLM+ + G   SI+ +I   DEF   SGL I+  KS ++ AG+    
Sbjct: 693  CKTMGLTHLSFADDLMVLSDGKIRSIERIIKVFDEFAKWSGLRISLEKSTVYLAGLSATA 752

Query: 197  LDDILDLVNYPKGTLPVRYLGVPLAAQKLNCVHYAPLHDRIAAYIDKWTANSLSYAGRLL 18
             +++ D   +  G LPVRYLG+PL  ++L+     PL +++   I  WT+  LSYAGRL 
Sbjct: 753  RNEVADRFPFSSGQLPVRYLGLPLITKRLSTTDCLPLLEQVRKRIGSWTSRFLSYAGRLN 812

Query: 17   LIKSV 3
            LI SV
Sbjct: 813  LISSV 817


>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
          Length = 653

 Score =  224 bits (571), Expect = 2e-56
 Identities = 108/245 (44%), Positives = 160/245 (65%)
 Frame = -3

Query: 737 DNIFLSQEILRNYARKRISPRCTIKVDLQKAYDTVSWSFLQDVLSGLGFPNLFISWIMEC 558
           +N+ L+ E++++Y ++ +S RC IK+D+ KA+++V WSF++++L  + FP  F+ WIM C
Sbjct: 100 ENLLLATELVKDYHKESVSSRCAIKIDISKAFNSVQWSFIRNILLSMDFPMEFVHWIMLC 159

Query: 557 VTSASFSISLNGSLHGKFPGKRGLRQGDPMSPALFLLCMEYLSRLINLRTSTHTFKYHPR 378
           +++ASFS+ +NG L G F  KRGLRQG  +SP LF++ M+ LS+L++   S   F YH R
Sbjct: 160 ISTASFSVQVNGELVGFFQSKRGLRQGCSLSPYLFVMSMDVLSKLLDQAASAKKFGYHSR 219

Query: 377 CQELKISHLIFADDLMLFAKGDTHSIKILIDCLDEFRIVSGLNINSSKSNIFTAGIFGKD 198
           C+EL ++HL FADDLM+ + G   SI  +++  D F   SGL I+  KS I+ AG+    
Sbjct: 220 CKELSLTHLSFADDLMVLSDGKVRSIDGIVEVFDIFAKFSGLKISMEKSTIYLAGVTEDV 279

Query: 197 LDDILDLVNYPKGTLPVRYLGVPLAAQKLNCVHYAPLHDRIAAYIDKWTANSLSYAGRLL 18
             +I +   +  G LPVRYLG+PL  ++L    Y+PL + I   I  WT   LSYAGRL 
Sbjct: 280 YHEIQNRYQFDVGQLPVRYLGLPLVTKRLTATDYSPLLEHIKKKIGTWTTRYLSYAGRLN 339

Query: 17  LIKSV 3
           LI SV
Sbjct: 340 LITSV 344


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score =  223 bits (569), Expect = 4e-56
 Identities = 110/245 (44%), Positives = 163/245 (66%)
 Frame = -3

Query: 737  DNIFLSQEILRNYARKRISPRCTIKVDLQKAYDTVSWSFLQDVLSGLGFPNLFISWIMEC 558
            +N+ L+ E+++ + +  IS R  +KVDL+KA+D+V W F+ + L     P  F++WI +C
Sbjct: 566  ENVLLATELVQGFGQANISSRGVLKVDLRKAFDSVGWGFIIETLKAANAPPRFVNWIKQC 625

Query: 557  VTSASFSISLNGSLHGKFPGKRGLRQGDPMSPALFLLCMEYLSRLINLRTSTHTFKYHPR 378
            +TS SFSI+++GSL G F G +GLRQGDP+SP+LF++ ME LSRL+  + S  +  YHP+
Sbjct: 626  ITSTSFSINVSGSLCGYFKGSKGLRQGDPLSPSLFVIAMEILSRLLENKFSDGSIGYHPK 685

Query: 377  CQELKISHLIFADDLMLFAKGDTHSIKILIDCLDEFRIVSGLNINSSKSNIFTAGIFGKD 198
              E++IS L FADDLM+F  G   S++ +   L+ F+ +SGL +N+ KS ++TAG+   D
Sbjct: 686  ASEVRISSLAFADDLMIFYDGKASSLRGIKSVLESFKNLSGLEMNTEKSAVYTAGLEDTD 745

Query: 197  LDDILDLVNYPKGTLPVRYLGVPLAAQKLNCVHYAPLHDRIAAYIDKWTANSLSYAGRLL 18
             +D L    +  GT P RYLG+PL  +KL    Y+ L D+IAA  + W   +LS+AGRL 
Sbjct: 746  KEDTL-AFGFVNGTFPFRYLGLPLLHRKLRRSDYSQLIDKIAARFNHWATKTLSFAGRLQ 804

Query: 17   LIKSV 3
            LI SV
Sbjct: 805  LISSV 809


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  222 bits (566), Expect = 9e-56
 Identities = 105/245 (42%), Positives = 155/245 (63%)
 Frame = -3

Query: 737  DNIFLSQEILRNYARKRISPRCTIKVDLQKAYDTVSWSFLQDVLSGLGFPNLFISWIMEC 558
            +N+ L+ E++++Y ++ ++PRC +K+D+ KA+D+V W FL + L  L FP  F  WI  C
Sbjct: 870  ENVLLATELVKDYHKESVTPRCAMKIDISKAFDSVQWQFLLNTLEALNFPETFRHWIKLC 929

Query: 557  VTSASFSISLNGSLHGKFPGKRGLRQGDPMSPALFLLCMEYLSRLINLRTSTHTFKYHPR 378
            +++A+FS+ +NG L G F   RGLRQG  +SP LF++CM  LS +I+         YHP+
Sbjct: 930  ISTATFSVQVNGELAGFFGSSRGLRQGCALSPYLFVICMNVLSHMIDEAAVHRNIGYHPK 989

Query: 377  CQELKISHLIFADDLMLFAKGDTHSIKILIDCLDEFRIVSGLNINSSKSNIFTAGIFGKD 198
            C+++ ++HL FADDLM+F  G   SI+ +I+   EF   SGL I+  KS I+ AG+   D
Sbjct: 990  CEKIGLTHLCFADDLMVFVDGHQWSIEGVINVFKEFAGRSGLQISLEKSTIYLAGVSASD 1049

Query: 197  LDDILDLVNYPKGTLPVRYLGVPLAAQKLNCVHYAPLHDRIAAYIDKWTANSLSYAGRLL 18
                L    +  G LPVRYLG+PL  +++    Y+PL + +   I  WTA SLSYAGRL 
Sbjct: 1050 RVQTLSSFPFANGQLPVRYLGLPLLTKQMTTADYSPLIEAVKTKISSWTARSLSYAGRLA 1109

Query: 17   LIKSV 3
            L+ SV
Sbjct: 1110 LLNSV 1114


>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1277

 Score =  222 bits (565), Expect = 1e-55
 Identities = 105/245 (42%), Positives = 158/245 (64%)
 Frame = -3

Query: 737  DNIFLSQEILRNYARKRISPRCTIKVDLQKAYDTVSWSFLQDVLSGLGFPNLFISWIMEC 558
            +N+ L+ E++++Y +  ISPRC +K+D+ KA+D+V W FL + L  L FP  F  WI  C
Sbjct: 715  ENVLLATELVKDYHKDSISPRCAMKIDISKAFDSVQWQFLLNTLEALKFPEKFRHWIKLC 774

Query: 557  VTSASFSISLNGSLHGKFPGKRGLRQGDPMSPALFLLCMEYLSRLINLRTSTHTFKYHPR 378
            +++A+FS+ +N    G F  KRGLRQG  +SP LF++CM  LS +I++        YHP+
Sbjct: 775  ISTATFSVQVNSEQAGFFGSKRGLRQGCALSPYLFVICMNVLSHMIDVAAVHRNIGYHPK 834

Query: 377  CQELKISHLIFADDLMLFAKGDTHSIKILIDCLDEFRIVSGLNINSSKSNIFTAGIFGKD 198
            C++L ++HL FADDLM+F  G   S++ +I+   +F   SGL+I+  KS ++ A +   +
Sbjct: 835  CKKLSLTHLCFADDLMVFIDGQQRSVEGVINIFKDFAGKSGLHISLEKSTLYLAEVSELN 894

Query: 197  LDDILDLVNYPKGTLPVRYLGVPLAAQKLNCVHYAPLHDRIAAYIDKWTANSLSYAGRLL 18
             ++IL    +  G LPVRYLG PL  +++    Y+PL D++ + I  WTA SLSYAGRL 
Sbjct: 895  RNNILSAFPFASGQLPVRYLGFPLLTKQMTTADYSPLLDKVRSKISSWTARSLSYAGRLA 954

Query: 17   LIKSV 3
            LI SV
Sbjct: 955  LINSV 959


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score =  220 bits (560), Expect = 4e-55
 Identities = 108/245 (44%), Positives = 157/245 (64%)
 Frame = -3

Query: 737 DNIFLSQEILRNYARKRISPRCTIKVDLQKAYDTVSWSFLQDVLSGLGFPNLFISWIMEC 558
           +N+ L+ E++++Y +  IS RC IK+D+ KA+D+V WSFL + L  + F   FI WI  C
Sbjct: 220 ENLLLATELVKDYHKDSISARCAIKIDISKAFDSVQWSFLTNTLVAMNFSPTFIHWINLC 279

Query: 557 VTSASFSISLNGSLHGKFPGKRGLRQGDPMSPALFLLCMEYLSRLINLRTSTHTFKYHPR 378
           +T+ASFS+ +NG L G F  KRGLRQG  +SP LF++CM+ LS++++       F +HP+
Sbjct: 280 ITTASFSVQVNGDLVGYFQSKRGLRQGCSLSPYLFVICMDVLSKMLDKAAGVRKFGFHPK 339

Query: 377 CQELKISHLIFADDLMLFAKGDTHSIKILIDCLDEFRIVSGLNINSSKSNIFTAGIFGKD 198
           CQ L ++HL FADDLM+ + G T SI+ +++  DEF   SGL I+  KS ++ AG+    
Sbjct: 340 CQRLGLTHLSFADDLMVLSDGKTRSIEGILEVFDEFCKRSGLRISLEKSTLYMAGVSPII 399

Query: 197 LDDILDLVNYPKGTLPVRYLGVPLAAQKLNCVHYAPLHDRIAAYIDKWTANSLSYAGRLL 18
             +I     +  G LPVRYLG+PL  ++L    Y+PL ++I   I  WT    S+AGR  
Sbjct: 400 KQEIAAKFLFDVGQLPVRYLGLPLVTKRLTSADYSPLLEQIKKRIATWTFRFFSFAGRFN 459

Query: 17  LIKSV 3
           LIKSV
Sbjct: 460 LIKSV 464


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score =  219 bits (558), Expect = 7e-55
 Identities = 109/247 (44%), Positives = 159/247 (64%), Gaps = 2/247 (0%)
 Frame = -3

Query: 737  DNIFLSQEILRNYARKRISPRCTIKVDLQKAYDTVSWSFLQDVLSGLGFPNLFISWIMEC 558
            +N+ L+ E++  Y R  ISPR  +KVDL+KA+D+V W F+   L  L  P  +I+WI +C
Sbjct: 427  ENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWEFVTAALRALAIPERYINWIHQC 486

Query: 557  VTSASFSISLNGSLHGKFPGKRGLRQGDPMSPALFLLCMEYLSRLINLRTSTHTFKYHPR 378
            +T+ SF+IS+NG+  G F   +GLRQGDP+SP LF+L ME  S+L+  R  +    YHP+
Sbjct: 487  ITTPSFTISVNGATGGFFRSTKGLRQGDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYHPK 546

Query: 377  CQELKISHLIFADDLMLFAKGDTHSIKILIDCLDEFRIVSGLNINSSKSNIFTAGIFGKD 198
              +L ISHL+FADD+M+F  G + S+  + + LD+F   SGL +N  KS +F AG+   D
Sbjct: 547  AGDLSISHLMFADDVMIFFDGGSSSMHGICETLDDFADWSGLKVNKDKSQLFQAGL---D 603

Query: 197  LDDILDLVNY--PKGTLPVRYLGVPLAAQKLNCVHYAPLHDRIAAYIDKWTANSLSYAGR 24
            L + +    Y  P GT P+RYLG+PL  +KL    Y PL ++++A +  W + +LS+AGR
Sbjct: 604  LSERITSAAYGFPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARLRSWVSKALSFAGR 663

Query: 23   LLLIKSV 3
              LI SV
Sbjct: 664  TQLISSV 670


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score =  219 bits (558), Expect = 7e-55
 Identities = 109/247 (44%), Positives = 159/247 (64%), Gaps = 2/247 (0%)
 Frame = -3

Query: 737  DNIFLSQEILRNYARKRISPRCTIKVDLQKAYDTVSWSFLQDVLSGLGFPNLFISWIMEC 558
            +N+ L+ E++  Y R  ISPR  +KVDL+KA+D+V W F+   L  L  P  +I+WI +C
Sbjct: 427  ENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWEFVTAALRALAIPERYINWIHQC 486

Query: 557  VTSASFSISLNGSLHGKFPGKRGLRQGDPMSPALFLLCMEYLSRLINLRTSTHTFKYHPR 378
            +T+ SF+IS+NG+  G F   +GLRQGDP+SP LF+L ME  S+L+  R  +    YHP+
Sbjct: 487  ITTPSFTISVNGATGGFFRSTKGLRQGDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYHPK 546

Query: 377  CQELKISHLIFADDLMLFAKGDTHSIKILIDCLDEFRIVSGLNINSSKSNIFTAGIFGKD 198
              +L ISHL+FADD+M+F  G + S+  + + LD+F   SGL +N  KS +F AG+   D
Sbjct: 547  AGDLSISHLMFADDVMIFFDGGSSSMHGICETLDDFADWSGLKVNKDKSQLFQAGL---D 603

Query: 197  LDDILDLVNY--PKGTLPVRYLGVPLAAQKLNCVHYAPLHDRIAAYIDKWTANSLSYAGR 24
            L + +    Y  P GT P+RYLG+PL  +KL    Y PL ++++A +  W + +LS+AGR
Sbjct: 604  LSERITSAAYGFPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARLRSWVSKALSFAGR 663

Query: 23   LLLIKSV 3
              LI SV
Sbjct: 664  TQLISSV 670


>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
            [Arabidopsis thaliana]
          Length = 1164

 Score =  216 bits (550), Expect = 6e-54
 Identities = 105/245 (42%), Positives = 160/245 (65%)
 Frame = -3

Query: 737  DNIFLSQEILRNYARKRISPRCTIKVDLQKAYDTVSWSFLQDVLSGLGFPNLFISWIMEC 558
            +N+ L+ E++  Y +K I+P   +KVDL+KA+D+V W F+   L  L  P  F  WI+EC
Sbjct: 464  ENVLLATELVHGYNKKNIAPSSMLKVDLRKAFDSVRWDFIVSALRALNVPEKFTCWILEC 523

Query: 557  VTSASFSISLNGSLHGKFPGKRGLRQGDPMSPALFLLCMEYLSRLINLRTSTHTFKYHPR 378
            +++ASFS+ LNG   G F   +GLRQGDPMSP LF+L ME  S L+  R ++    YHP+
Sbjct: 524  LSTASFSVILNGHSAGHFWSSKGLRQGDPMSPYLFVLAMEVFSGLLQSRYTSGYIAYHPK 583

Query: 377  CQELKISHLIFADDLMLFAKGDTHSIKILIDCLDEFRIVSGLNINSSKSNIFTAGIFGKD 198
              +L+ISHL+FADD+M+F  G + S+  +++ L++F   SGL +N++K+ ++ AG+   +
Sbjct: 584  TSQLEISHLMFADDVMIFFDGKSSSLHGIVESLEDFAGWSGLLMNTNKTQLYHAGLSQSE 643

Query: 197  LDDILDLVNYPKGTLPVRYLGVPLAAQKLNCVHYAPLHDRIAAYIDKWTANSLSYAGRLL 18
             D +     +  G+LPVRYLG+PL ++KL    YAPL ++I A  + W    LS+AGR+ 
Sbjct: 644  SDSMAS-YGFKLGSLPVRYLGLPLMSRKLTIAEYAPLIEKITARFNSWVVRLLSFAGRVQ 702

Query: 17   LIKSV 3
            L+ SV
Sbjct: 703  LLASV 707


>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score =  215 bits (547), Expect = 1e-53
 Identities = 104/245 (42%), Positives = 155/245 (63%)
 Frame = -3

Query: 737 DNIFLSQEILRNYARKRISPRCTIKVDLQKAYDTVSWSFLQDVLSGLGFPNLFISWIMEC 558
           +N+ L+ +++++Y +  IS RC IK+D+ KA D+V WSFL + L+ + FP +FI WI  C
Sbjct: 126 ENVLLATDLVKDYHKDSISERCAIKIDISKASDSVQWSFLINTLTAMHFPEMFIHWIRLC 185

Query: 557 VTSASFSISLNGSLHGKFPGKRGLRQGDPMSPALFLLCMEYLSRLINLRTSTHTFKYHPR 378
           +T+ SFS+ +NG L G F   RGLRQG  +SP LF++CM+ LS+L++         YHP 
Sbjct: 186 ITTPSFSVQVNGELAGFFQSSRGLRQGCALSPYLFVICMDVLSKLLDKVVGIGRIGYHPH 245

Query: 377 CQELKISHLIFADDLMLFAKGDTHSIKILIDCLDEFRIVSGLNINSSKSNIFTAGIFGKD 198
           C+ + ++HL FADDLM+   G   SI+ +I+  D F   SGL I+  KS IF+AG+    
Sbjct: 246 CKRMGLTHLSFADDLMILTDGQCRSIEGIIEVFDLFSKWSGLKISMEKSTIFSAGLSSTS 305

Query: 197 LDDILDLVNYPKGTLPVRYLGVPLAAQKLNCVHYAPLHDRIAAYIDKWTANSLSYAGRLL 18
              +     +  G LP+RYLG+PL  ++L+ V YAPL ++I   I  W++  LS+AGR  
Sbjct: 306 RAQLHTHFPFEVGELPIRYLGLPLVTKRLSSVDYAPLIEQIRKRIGSWSSRFLSFAGRFN 365

Query: 17  LIKSV 3
           LI S+
Sbjct: 366 LISSI 370


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1216

 Score =  213 bits (543), Expect = 4e-53
 Identities = 104/245 (42%), Positives = 154/245 (62%)
 Frame = -3

Query: 737  DNIFLSQEILRNYARKRISPRCTIKVDLQKAYDTVSWSFLQDVLSGLGFPNLFISWIMEC 558
            +N+ L+ E++++Y +  IS RC +K+D+ KA+D++ WSFL  VL+ + FP  FI WI  C
Sbjct: 294  ENVLLATELVKDYHKDSISTRCAMKIDISKAFDSLQWSFLTHVLAAMNFPGEFIHWISLC 353

Query: 557  VTSASFSISLNGSLHGKFPGKRGLRQGDPMSPALFLLCMEYLSRLINLRTSTHTFKYHPR 378
            +++ASFSI +NG L G F   RGLRQG  +SP LF++ M+ LSR+++       F YHPR
Sbjct: 354  MSTASFSIQVNGELAGYFRSARGLRQGCSLSPYLFVISMDVLSRMLDKAAGAREFGYHPR 413

Query: 377  CQELKISHLIFADDLMLFAKGDTHSIKILIDCLDEFRIVSGLNINSSKSNIFTAGIFGKD 198
            C+ L ++HL FADDLM+   G   S+  ++  L++F    GL I   K+ ++ AG+    
Sbjct: 414  CKTLGLTHLCFADDLMILTDGKIRSVDGIVKVLNQFAAKLGLKICMEKTTLYLAGVSDHS 473

Query: 197  LDDILDLVNYPKGTLPVRYLGVPLAAQKLNCVHYAPLHDRIAAYIDKWTANSLSYAGRLL 18
               +    ++  G LPVRYLG+PL  ++L    Y+PL D+I   I  WT+  LS+AGRL 
Sbjct: 474  RQLMSSRYSFGVGKLPVRYLGLPLVTKRLTTSDYSPLIDQIRRRIGMWTSRYLSFAGRLS 533

Query: 17   LIKSV 3
            LI SV
Sbjct: 534  LINSV 538


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|7267919|emb|CAB78261.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 662

 Score =  213 bits (542), Expect = 5e-53
 Identities = 104/245 (42%), Positives = 156/245 (63%)
 Frame = -3

Query: 737 DNIFLSQEILRNYARKRISPRCTIKVDLQKAYDTVSWSFLQDVLSGLGFPNLFISWIMEC 558
           +N+ L+ E++++Y +  +S RC IK+D+ KA+D+V WSFL++VL  L FP  F+ WIM C
Sbjct: 91  ENLLLATELVKDYHKDSVSERCAIKIDISKAFDSVQWSFLRNVLLTLDFPQEFVHWIMLC 150

Query: 557 VTSASFSISLNGSLHGKFPGKRGLRQGDPMSPALFLLCMEYLSRLINLRTSTHTFKYHPR 378
           VT+ASFS+ +N  L G F   RGLRQG  ++P LF++ M+ LS+ ++       F YHP+
Sbjct: 151 VTTASFSVQVNRELAGYFNSLRGLRQGCSLTPYLFVIVMDVLSKKLDRAAGLRKFGYHPK 210

Query: 377 CQELKISHLIFADDLMLFAKGDTHSIKILIDCLDEFRIVSGLNINSSKSNIFTAGIFGKD 198
           C+ L ++HL FADD+M+   G   S++ +++  D F   SGL I+ +K+ I+ AGI    
Sbjct: 211 CKNLGLTHLSFADDIMVLTDGKLRSLEGIVEVFDSFAKQSGLKISMAKTTIYFAGISKSV 270

Query: 197 LDDILDLVNYPKGTLPVRYLGVPLAAQKLNCVHYAPLHDRIAAYIDKWTANSLSYAGRLL 18
             +  D  ++  G LPVRYL +PL  ++     Y+PL ++I   I  WTA  LSYAGRL 
Sbjct: 271 CKEFEDQFHFAVGRLPVRYLCLPLVTKRFTSQDYSPLLEQIKRRIGTWTARFLSYAGRLN 330

Query: 17  LIKSV 3
           L+ SV
Sbjct: 331 LVSSV 335


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score =  211 bits (537), Expect = 2e-52
 Identities = 104/245 (42%), Positives = 155/245 (63%)
 Frame = -3

Query: 737  DNIFLSQEILRNYARKRISPRCTIKVDLQKAYDTVSWSFLQDVLSGLGFPNLFISWIMEC 558
            +N+ L+ E++++Y ++ IS R  +K+D+ KA+D V W FL +VL  +  P +FI WI  C
Sbjct: 720  ENLLLASELVKDYHKESISSRSALKIDISKAFDFVQWPFLINVLKAIHLPEMFIHWIELC 779

Query: 557  VTSASFSISLNGSLHGKFPGKRGLRQGDPMSPALFLLCMEYLSRLINLRTSTHTFKYHPR 378
            + +ASFS+ +NG L G F  +RGLRQG  +SP L+++CM  LS +++         YHPR
Sbjct: 780  IGTASFSVQVNGELSGFFRSERGLRQGCSLSPYLYVICMNVLSCMLDKAAVEKKISYHPR 839

Query: 377  CQELKISHLIFADDLMLFAKGDTHSIKILIDCLDEFRIVSGLNINSSKSNIFTAGIFGKD 198
            C+ + ++HL FADD+M+F+ G + SI+  +   ++F  +S L I+  KS IF AGI    
Sbjct: 840  CRNMNLTHLCFADDIMVFSDGTSKSIQGTLAIFEKFAAMSWLKISLEKSTIFMAGISPNA 899

Query: 197  LDDILDLVNYPKGTLPVRYLGVPLAAQKLNCVHYAPLHDRIAAYIDKWTANSLSYAGRLL 18
               IL    +  GTLPV+YLG+PL  +++    Y PL ++I A I  WT   LS+AGRL 
Sbjct: 900  KTSILQQFPFELGTLPVKYLGLPLLTKRMTQSDYLPLVEKIRARITSWTNRFLSFAGRLQ 959

Query: 17   LIKSV 3
            LIKSV
Sbjct: 960  LIKSV 964