BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00000256
         (2823 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymeras...  1442   0.0  
ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1432   0.0  
ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1427   0.0  
sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymeras...  1424   0.0  
gb|EPS64933.1| hypothetical protein M569_09836 [Genlisea aurea]      1415   0.0  
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1372   0.0  
gb|EMJ04424.1| hypothetical protein PRUPE_ppa000868mg [Prunus pe...  1353   0.0  
ref|XP_002325119.1| DNA-directed RNA polymerase family protein [...  1351   0.0  
ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1342   0.0  
ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Popu...  1337   0.0  
gb|EOY31496.1| DNA/RNA polymerases superfamily protein isoform 1...  1337   0.0  
ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1330   0.0  
ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citr...  1313   0.0  
ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1313   0.0  
ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, ch...  1310   0.0  
emb|CBI36559.3| unnamed protein product [Vitis vinifera]             1310   0.0  
gb|EOY31497.1| DNA/RNA polymerases superfamily protein isoform 2...  1304   0.0  
emb|CAC80139.1| DNA-dependent RNA polymerase [Spinacia oleracea]     1281   0.0  
ref|XP_006404912.1| hypothetical protein EUTSA_v10000030mg [Eutr...  1259   0.0  
ref|XP_006296121.1| hypothetical protein CARUB_v10025273mg [Caps...  1258   0.0  

>sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymerase 3, chloroplastic; AltName:
            Full=NsRpoT-C; AltName: Full=T7 bacteriophage-type single
            subunit RNA polymerase 3; Flags: Precursor
            gi|59800203|sp|P69243.1|RPO3A_TOBAC RecName:
            Full=DNA-directed RNA polymerase 3A, chloroplastic;
            AltName: Full=NictaRpoT3-syl; AltName: Full=T7
            bacteriophage-type single subunit RNA polymerase 3A;
            Flags: Precursor gi|21425641|emb|CAC82576.3| phage-type
            RNA polymerase [Nicotiana sylvestris]
            gi|21425679|emb|CAC95027.2| plastid RNA polymerase
            [Nicotiana tabacum] gi|24475541|dbj|BAC22693.1| T7
            bacteriophage-type single subunit RNA polymerase
            [Nicotiana sylvestris] gi|24475543|dbj|BAC22694.1| T7
            bacteriophage-type single subunit RNA polymerase
            [Nicotiana sylvestris]
          Length = 977

 Score = 1442 bits (3734), Expect = 0.0
 Identities = 703/878 (80%), Positives = 791/878 (90%), Gaps = 1/878 (0%)
 Frame = +2

Query: 2    TKESGDRVFIQDPPWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYY-VLRRRQIKAETE 178
            TKES  RVFIQDPPW+SSLFM SL  R +   GV+ EF+E+ERR+ Y +LRRRQIKAETE
Sbjct: 94   TKESNKRVFIQDPPWVSSLFMNSLFVRAKQVQGVRREFREIERRRRYAMLRRRQIKAETE 153

Query: 179  AWXXXXXXXXXXXXXXXXXKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFA 358
            AW                 KLAPNLP+VKKL+LGWFEPLR+AIEKEQN + + K++AAFA
Sbjct: 154  AWEQMVEEYRELEREMCEKKLAPNLPYVKKLLLGWFEPLRQAIEKEQNAETTVKHRAAFA 213

Query: 359  PYVDALPADKMAVIVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTK 538
            P++D+LPADKMAVIVMHK+MGLLMMGGKE+RCV+VV+AAVQIG+A+E+EVRIH+FLE+TK
Sbjct: 214  PHIDSLPADKMAVIVMHKLMGLLMMGGKEERCVQVVQAAVQIGMAVENEVRIHNFLEKTK 273

Query: 539  KHQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGC 718
            K Q+   GA+SQED  +E  ILRKRVKSLIKRNRV+EV+KL++SEE +SWGRDTQAKLGC
Sbjct: 274  KLQKHMTGAQSQEDMSRETMILRKRVKSLIKRNRVVEVRKLMKSEEPESWGRDTQAKLGC 333

Query: 719  CLIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLA 898
             L++LLT++AYVQPPV+QSAD+PPD+RPAFRH+F+IATR+ G+S+VKKYGVIECDPLV+A
Sbjct: 334  RLLELLTETAYVQPPVDQSADTPPDIRPAFRHVFRIATRDPGKSIVKKYGVIECDPLVVA 393

Query: 899  GLDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQ 1078
            G+D+TVK M+IPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSR+QQDAV++VPTKQMQ
Sbjct: 394  GVDRTVKQMMIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRRQQDAVRSVPTKQMQ 453

Query: 1079 KVYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPELLSDDXXXXXXXX 1258
            +VYEALDTLG+TKWRVNKRILSVVESIWA GGN+AGLV+R+DVPIPEL SDD        
Sbjct: 454  QVYEALDTLGSTKWRVNKRILSVVESIWAGGGNIAGLVDRKDVPIPELHSDDIMEVKKWK 513

Query: 1259 XXXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSS 1438
                    INQE HSQRCDTELKLSVARK+KDEEGFYYPHNLDFRGRAYPMHPHLNHLSS
Sbjct: 514  WRVRKSKKINQELHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLNHLSS 573

Query: 1439 DLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADN 1618
            DLCRGILEFAEGRPLGKSGLRWLKIHLA+LY GG+EKL YD R++FVEN+I +I DSA+N
Sbjct: 574  DLCRGILEFAEGRPLGKSGLRWLKIHLASLYAGGIEKLCYDARLAFVENHIDDILDSANN 633

Query: 1619 SLNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRD 1798
             LNGNRWWL AEDPFQCLAACINLSEAL+SSSPHTV SHLPIHQDGSCNGLQHYAALGRD
Sbjct: 634  PLNGNRWWLNAEDPFQCLAACINLSEALKSSSPHTVFSHLPIHQDGSCNGLQHYAALGRD 693

Query: 1799 SFEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVK 1978
            S EAAAVNL+AGDKPADVY+EIA RV +I++ DS KDPATDP+ALLAKLLI QVDRKLVK
Sbjct: 694  SMEAAAVNLVAGDKPADVYTEIALRVDHIIRGDSIKDPATDPNALLAKLLIDQVDRKLVK 753

Query: 1979 QTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAI 2158
            QTVMTSVYGVTYVGAREQIKRRLEEKGLI DDRLLF+A+CYAAKVTLAALGELFQAAR  
Sbjct: 754  QTVMTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELFQAARGT 813

Query: 2159 MGWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRK 2338
            M WLGDCAK+IASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGD+VEVRK
Sbjct: 814  MTWLGDCAKVIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDTVEVRK 873

Query: 2339 QRTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFVDL 2518
            QRTAFPPNFVHSLDGSHMMMTA+ACRD GL+FAGVHDSFWTHACDVD+MN+ILR+KFV+L
Sbjct: 874  QRTAFPPNFVHSLDGSHMMMTAVACRDAGLQFAGVHDSFWTHACDVDQMNRILREKFVEL 933

Query: 2519 YNMPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2632
            Y+MPILE LLESF+ SYP LTFPPLP RGDFDL +V++
Sbjct: 934  YSMPILEDLLESFQNSYPALTFPPLPKRGDFDLVEVLE 971


>ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Solanum
            tuberosum]
          Length = 1015

 Score = 1432 bits (3706), Expect = 0.0
 Identities = 693/877 (79%), Positives = 785/877 (89%), Gaps = 1/877 (0%)
 Frame = +2

Query: 5    KESGDRVFIQDPPWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYY-VLRRRQIKAETEA 181
            KES  RVFIQDPPW+SSLFM SL  R +   GV+ EF+E+ERR+ Y +LRRRQIKAETEA
Sbjct: 133  KESNKRVFIQDPPWVSSLFMNSLFVRAKQVKGVRREFREIERRRRYAMLRRRQIKAETEA 192

Query: 182  WXXXXXXXXXXXXXXXXXKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAP 361
            W                 KLAPNLP+VKKL+LGWFEPLR+AIEKEQN + ++K++ A+AP
Sbjct: 193  WEQMVEEYRELEREMCEKKLAPNLPYVKKLLLGWFEPLRQAIEKEQNAEMTQKHRTAYAP 252

Query: 362  YVDALPADKMAVIVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKK 541
            ++D+LPADKMAVIVMHK+MGLLMMGGKE+RCV+VV+AAVQIG+A+E+EVRIH+F+E+TKK
Sbjct: 253  HIDSLPADKMAVIVMHKLMGLLMMGGKEERCVQVVQAAVQIGMAVENEVRIHNFMEKTKK 312

Query: 542  HQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCC 721
            HQ+   GA+ QED  +E  ILRKRVKSLIKRNRV+EV+KL++SEE +SWGRDTQAKLGC 
Sbjct: 313  HQKHMSGAQGQEDMSRETMILRKRVKSLIKRNRVVEVRKLMQSEEPESWGRDTQAKLGCR 372

Query: 722  LIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAG 901
            L++LLT++AYVQPPV+QSAD+PPD+RPAFRH+F+IATR+ G+++VKKYGVIECDPLV+ G
Sbjct: 373  LLELLTETAYVQPPVDQSADTPPDIRPAFRHVFRIATRDPGKNIVKKYGVIECDPLVVVG 432

Query: 902  LDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQK 1081
            +D+TVK M+IPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSR+QQDAV++VP KQMQ+
Sbjct: 433  VDRTVKQMMIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRRQQDAVRSVPAKQMQQ 492

Query: 1082 VYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPELLSDDXXXXXXXXX 1261
            VYEALDTLG+TKWRVNKRILSVVESIWA GGN+AGLV+R+DVPIPEL SDD         
Sbjct: 493  VYEALDTLGSTKWRVNKRILSVVESIWAGGGNIAGLVDRKDVPIPELHSDDIMELKRWKW 552

Query: 1262 XXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSD 1441
                   INQE HSQRCDTELKLSVARK+KDEEGFYYPHNLDFRGRAYPMHPHLNHLSSD
Sbjct: 553  RVRKAKKINQELHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSD 612

Query: 1442 LCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNS 1621
            LCRGILEFAEGRPLGKSGLRWLK+HLA+LY GG+EKL YD RI+FVEN+I +I DSA N 
Sbjct: 613  LCRGILEFAEGRPLGKSGLRWLKVHLASLYAGGIEKLCYDARIAFVENHIDDILDSAHNP 672

Query: 1622 LNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDS 1801
            LNGNRWWL AEDP QCLAACINLSEAL+S SPHTV+SHLPIHQDGSCNGLQHYAALGRDS
Sbjct: 673  LNGNRWWLNAEDPLQCLAACINLSEALKSPSPHTVISHLPIHQDGSCNGLQHYAALGRDS 732

Query: 1802 FEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQ 1981
             EAAAVNL+AG+KPADVY+EIA RV +I++ DS KDPATDP+ALLAKLLI QVDRKLVKQ
Sbjct: 733  MEAAAVNLVAGEKPADVYTEIALRVDHIIRGDSTKDPATDPNALLAKLLIDQVDRKLVKQ 792

Query: 1982 TVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIM 2161
            TVMTSVYGVTYVGAREQIKRRLEEKGLI DDRLLF+A+CYAAKVTLAALGELFQAAR  M
Sbjct: 793  TVMTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELFQAARGTM 852

Query: 2162 GWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQ 2341
             WLGDCAK+IASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGD+VEVRKQ
Sbjct: 853  TWLGDCAKVIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDAVEVRKQ 912

Query: 2342 RTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLY 2521
            RTAFPPNFVHSLDGSHMMMTA+ACRD GL FAGVHDSFWTHACDVD+MN+ILR+KFV+LY
Sbjct: 913  RTAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDQMNRILREKFVELY 972

Query: 2522 NMPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2632
            +MPILE LLESF+ SYP LTFPPLP RGDFDL +V++
Sbjct: 973  SMPILEDLLESFQESYPALTFPPLPKRGDFDLQEVLE 1009


>ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Solanum
            lycopersicum]
          Length = 1007

 Score = 1427 bits (3695), Expect = 0.0
 Identities = 689/877 (78%), Positives = 785/877 (89%), Gaps = 1/877 (0%)
 Frame = +2

Query: 5    KESGDRVFIQDPPWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYY-VLRRRQIKAETEA 181
            KES  RVFIQDPPW+SSLFM +L  R +   GV+ EF+E+ERR+ Y +LRRRQIKAETEA
Sbjct: 125  KESNKRVFIQDPPWVSSLFMNNLFVRAKQVKGVRREFREIERRRRYAMLRRRQIKAETEA 184

Query: 182  WXXXXXXXXXXXXXXXXXKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAP 361
            W                 KLAPNLP+VKKLMLGWFEPLR+AIE+EQN + ++K++ A+AP
Sbjct: 185  WEQMVEEYRELEREMCEKKLAPNLPYVKKLMLGWFEPLRQAIEREQNAEMTQKHRTAYAP 244

Query: 362  YVDALPADKMAVIVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKK 541
            ++D+LPADKMAVIVMHK+MGLLMMGGKE+RCV+VV+AAVQIG+A+E+EVRIH+F+E+TKK
Sbjct: 245  HIDSLPADKMAVIVMHKLMGLLMMGGKEERCVQVVQAAVQIGMAVENEVRIHNFMEKTKK 304

Query: 542  HQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCC 721
            HQ+   GA+ QED  +E  ILRKRVKSLIKRNRV+EV+KL++SEE +SWGRDTQAKLGC 
Sbjct: 305  HQKHMTGAQGQEDMSRETMILRKRVKSLIKRNRVVEVRKLMQSEEPESWGRDTQAKLGCR 364

Query: 722  LIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAG 901
            L++LLT++AYVQPPV+QSAD+PPD+RPAFRH+F+IATR+ G+++VKKYGVIECDPLV+ G
Sbjct: 365  LLELLTETAYVQPPVDQSADTPPDIRPAFRHVFRIATRDPGKNIVKKYGVIECDPLVVVG 424

Query: 902  LDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQK 1081
            +D+TVK M+IPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSR+QQDAV++VP KQMQ+
Sbjct: 425  VDRTVKQMMIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRRQQDAVRSVPAKQMQQ 484

Query: 1082 VYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPELLSDDXXXXXXXXX 1261
            VYEALDTLG+TKWRVNKRILSVVE+IWA GGN+AGLV+R+DVPIPEL SDD         
Sbjct: 485  VYEALDTLGSTKWRVNKRILSVVETIWAGGGNIAGLVDRKDVPIPELHSDDIMELKRWKW 544

Query: 1262 XXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSD 1441
                   INQE HSQRCDTELKLSVARK++DEEGFYYPHNLDFRGRAYPMHPHLNHLSSD
Sbjct: 545  RVRKAKKINQELHSQRCDTELKLSVARKLRDEEGFYYPHNLDFRGRAYPMHPHLNHLSSD 604

Query: 1442 LCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNS 1621
            LCRGILEFAEGRPLGKSGLRWLK+HLA+LY GG+EKL YD RI+FVEN+I +I DSA N 
Sbjct: 605  LCRGILEFAEGRPLGKSGLRWLKVHLASLYAGGIEKLCYDARIAFVENHIDDILDSAHNP 664

Query: 1622 LNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDS 1801
            LNGNRWWL AEDP QCLAACINLSEA++S SPHTV+SHLPIHQDGSCNGLQHYAALGRDS
Sbjct: 665  LNGNRWWLNAEDPLQCLAACINLSEAVKSLSPHTVISHLPIHQDGSCNGLQHYAALGRDS 724

Query: 1802 FEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQ 1981
             EAAAVNL+AG+KPADVY+EIA RV +I++ DS KDPATDP+ALLAKLLI QVDRKLVKQ
Sbjct: 725  MEAAAVNLVAGEKPADVYTEIALRVDHIIRGDSTKDPATDPNALLAKLLIDQVDRKLVKQ 784

Query: 1982 TVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIM 2161
            TVMTSVYGVTYVGAREQIKRRLEEKGLI DDRLLF+A+CYAAKVTLAALGELFQAAR  M
Sbjct: 785  TVMTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELFQAARGTM 844

Query: 2162 GWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQ 2341
             WLGDCAK+IASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGD+VEVRKQ
Sbjct: 845  TWLGDCAKVIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDAVEVRKQ 904

Query: 2342 RTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLY 2521
            RTAFPPNFVHSLDGSHMMMTA+ACRD GL FAGVHDSFWTHACDVD+MN+ILR+KFV+LY
Sbjct: 905  RTAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDQMNRILREKFVELY 964

Query: 2522 NMPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2632
            +MPILE LLESF+ SYP LTFPPLP RGDFDL +V++
Sbjct: 965  SMPILEDLLESFQESYPALTFPPLPKRGDFDLREVLE 1001


>sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymerase 3B, chloroplastic; AltName:
            Full=NictaRpoT3-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 3B; Flags: Precursor
            gi|21425667|emb|CAC95021.2| chloroplast RNA polymerase
            [Nicotiana tabacum]
          Length = 977

 Score = 1424 bits (3687), Expect = 0.0
 Identities = 695/878 (79%), Positives = 787/878 (89%), Gaps = 2/878 (0%)
 Frame = +2

Query: 5    KESGDRVFIQDPPWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYY-VLRRRQIKAETEA 181
            KES  RVFIQDPPW+SSLFM SL  R +   GV+ EF+E+ERR+ Y +LRRRQIKAETEA
Sbjct: 94   KESNKRVFIQDPPWVSSLFMNSLFVRAKQVQGVRREFREIERRRRYAMLRRRQIKAETEA 153

Query: 182  WXXXXXXXXXXXXXXXXXKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAP 361
            W                 KLAPNLP+VKKL+LGWFEPLR+AIEKEQN + + K++AAFAP
Sbjct: 154  WEQMVEEYRELEREMCEKKLAPNLPYVKKLLLGWFEPLRQAIEKEQNAETTVKHRAAFAP 213

Query: 362  YVDALPADKMAVIVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKK 541
            ++D+LPADKMAVIVMHK+MGLLMMGGKE+RCV+VV+AAVQIG+A+E+EVRIH+FLE+TKK
Sbjct: 214  HIDSLPADKMAVIVMHKLMGLLMMGGKEERCVQVVQAAVQIGMAVENEVRIHNFLEKTKK 273

Query: 542  HQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCC 721
             Q+   GA+SQED  KE  ILRKRVKSLIKRNRV+EV+KL++SEE +SWGRDTQAKLGC 
Sbjct: 274  LQKHMTGAQSQEDMSKETMILRKRVKSLIKRNRVVEVRKLMKSEEPESWGRDTQAKLGCR 333

Query: 722  LIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAG 901
            L++LLT++AYVQ PV+QSAD+PPD+RPAFRH+FKIATR+ G+++VKKYGVIECDPLV+AG
Sbjct: 334  LLELLTETAYVQRPVDQSADTPPDIRPAFRHVFKIATRDPGKNIVKKYGVIECDPLVVAG 393

Query: 902  LDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQK 1081
            +D+TVK M+IPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSR+QQDAV+ VPTKQMQ+
Sbjct: 394  VDRTVKQMMIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRRQQDAVRGVPTKQMQQ 453

Query: 1082 VYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPELL-SDDXXXXXXXX 1258
            VYEALDTLG+TKWRVNKRIL+VVESIWA GGN+AGLV+R+DVPIPEL  SDD        
Sbjct: 454  VYEALDTLGSTKWRVNKRILNVVESIWAGGGNIAGLVDRKDVPIPELSNSDDIMEVKKWK 513

Query: 1259 XXXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSS 1438
                    INQE HSQRCDTELKLSVARK+KDEEGFYYPHNLDFRGRAYPMHPHLNHLSS
Sbjct: 514  WKVRKSKKINQELHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLNHLSS 573

Query: 1439 DLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADN 1618
            DLCRGILEFAEGRPLGKSGLRWLKIHLA+LY GGVEKL YD R++FVEN+I +I DSA+N
Sbjct: 574  DLCRGILEFAEGRPLGKSGLRWLKIHLASLYAGGVEKLCYDARLAFVENHIHDILDSANN 633

Query: 1619 SLNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRD 1798
             LNGNRWWL AEDPFQCLAACINLSEAL+SSSPHTV+SHLPIHQDGSCNGLQHYAALGRD
Sbjct: 634  PLNGNRWWLNAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAALGRD 693

Query: 1799 SFEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVK 1978
            S EAAAVNL+AG+KPADVY+EIA RV +I++ DS KDPA DP+ALLAKLLI QVDRKLVK
Sbjct: 694  SMEAAAVNLVAGEKPADVYTEIALRVDHIIRGDSIKDPAIDPNALLAKLLIDQVDRKLVK 753

Query: 1979 QTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAI 2158
            QTVMTSVYGVTYVGAREQIKRRLEEKGLI DDRLLF+A+CYAAKVTLAALGELFQAAR  
Sbjct: 754  QTVMTSVYGVTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELFQAARGT 813

Query: 2159 MGWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRK 2338
            M WLGDCAK+IA ENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQ+LALQREGD+VEVRK
Sbjct: 814  MTWLGDCAKVIALENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQILALQREGDAVEVRK 873

Query: 2339 QRTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFVDL 2518
            QRTAFPPNFVHSLDGSHMMMTA+ACRD GL+FAGVHDSFWTHACDVD+MN+ILR+KFV+L
Sbjct: 874  QRTAFPPNFVHSLDGSHMMMTAVACRDAGLQFAGVHDSFWTHACDVDQMNRILREKFVEL 933

Query: 2519 YNMPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2632
            Y++PILE LLE+F+ SYP LTFPPLP RGDF+L +V++
Sbjct: 934  YSLPILEDLLENFQKSYPALTFPPLPKRGDFNLREVLE 971


>gb|EPS64933.1| hypothetical protein M569_09836 [Genlisea aurea]
          Length = 952

 Score = 1415 bits (3664), Expect = 0.0
 Identities = 692/877 (78%), Positives = 770/877 (87%), Gaps = 1/877 (0%)
 Frame = +2

Query: 2    TKESGDRV-FIQDPPWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYYVLRRRQIKAETE 178
            +KE  DRV  IQDPPWISSL++KSLLFR RNR  VKIEFKEMER KYY LRRRQIKAETE
Sbjct: 70   SKELRDRVVIIQDPPWISSLYIKSLLFRNRNRCDVKIEFKEMERHKYYELRRRQIKAETE 129

Query: 179  AWXXXXXXXXXXXXXXXXXKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFA 358
            AW                 K+APNLP+ KKLMLGWFEPL EAI  EQ++Q+ KKN+ AFA
Sbjct: 130  AWENMVKEYKELEKEMCEKKMAPNLPYFKKLMLGWFEPLTEAIRTEQSLQKPKKNRIAFA 189

Query: 359  PYVDALPADKMAVIVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTK 538
            PY+D+LP + MAVIVMHKIMGLLMMGGK+DRC+RVVEAA+QIG AIE EVRIH+FLE+TK
Sbjct: 190  PYIDSLPPESMAVIVMHKIMGLLMMGGKQDRCIRVVEAALQIGKAIEQEVRIHAFLEKTK 249

Query: 539  KHQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGC 718
             HQ+  V +ESQE+S ++AA LRKRVK+L++R R +EVQKLV+SE  + W R+ QAKLGC
Sbjct: 250  -HQKEAVASESQENSCEKAANLRKRVKNLVRRGRGVEVQKLVKSENHEPWTREIQAKLGC 308

Query: 719  CLIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLA 898
            CLI LLTQSAYVQPPV+QSADSPPDVRPAFRH FKIATRE  Q++V++YGVIECDPL+L 
Sbjct: 309  CLINLLTQSAYVQPPVSQSADSPPDVRPAFRHFFKIATREPRQTVVRRYGVIECDPLILD 368

Query: 899  GLDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQ 1078
            G +  VKHM++P++PML+PPKKW+GYDKGGYLFLPSY+MRTHGSR+QQDAVK V  ++MQ
Sbjct: 369  GFESNVKHMMVPHIPMLIPPKKWKGYDKGGYLFLPSYVMRTHGSRRQQDAVKTVSPRKMQ 428

Query: 1079 KVYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPELLSDDXXXXXXXX 1258
            KV+EALDTLGNTKWRVNK ILSVVE IWAAGGN+AGLVNREDVP+PEL SDD        
Sbjct: 429  KVFEALDTLGNTKWRVNKSILSVVEDIWAAGGNIAGLVNREDVPLPELHSDDPIEIKKWK 488

Query: 1259 XXXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSS 1438
                     N E HS RCDTELKLSVAR MKDEEGFYYPHN+DFRGRAYPMHPHLNHLSS
Sbjct: 489  FSIRKAKKNNMEMHSLRCDTELKLSVARAMKDEEGFYYPHNVDFRGRAYPMHPHLNHLSS 548

Query: 1439 DLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADN 1618
            DLCRGILEF+EGRPLGKSGL WLK+HLANL+GGGV+KL YD R+SFVEN I E+FDSADN
Sbjct: 549  DLCRGILEFSEGRPLGKSGLYWLKLHLANLFGGGVQKLPYDERLSFVENNITEVFDSADN 608

Query: 1619 SLNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRD 1798
             L+GNRWWLKAEDPFQ LAACIN+SEALRSSSPHTV+SHLPIHQDGSCNGLQHYAALGRD
Sbjct: 609  PLSGNRWWLKAEDPFQFLAACINISEALRSSSPHTVISHLPIHQDGSCNGLQHYAALGRD 668

Query: 1799 SFEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVK 1978
            SFEAAAVNL+AG KP DVYSEIAERV +IMK DSEKDPA DP+A+LAKLLIGQVDRKLVK
Sbjct: 669  SFEAAAVNLVAGHKPTDVYSEIAERVLDIMKSDSEKDPADDPNAVLAKLLIGQVDRKLVK 728

Query: 1979 QTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAI 2158
            QTVMTSVYGVTYVGAREQI++RL EKG I DD++LF AACYAAKVT+AALG+LFQAARAI
Sbjct: 729  QTVMTSVYGVTYVGAREQIRKRLAEKGFINDDKVLFMAACYAAKVTMAALGQLFQAARAI 788

Query: 2159 MGWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRK 2338
            M WLGDCAKIIASENQPVRWTTPLGLPVVQPYFKT+RHVIRTSLQVLALQREGDSVEVRK
Sbjct: 789  MSWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTKRHVIRTSLQVLALQREGDSVEVRK 848

Query: 2339 QRTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFVDL 2518
            Q+TAFPPNFVHSLDGSHMMMTA+ACRD GLRFAGVHDSFWTHACDVD+MNQILR+KFVDL
Sbjct: 849  QKTAFPPNFVHSLDGSHMMMTAVACRDAGLRFAGVHDSFWTHACDVDKMNQILREKFVDL 908

Query: 2519 YNMPILESLLESFETSYPTLTFPPLPNRGDFDLNKVV 2629
            Y+MPILE LLESF++SYPTL FPPLP RGDFDL  V+
Sbjct: 909  YSMPILEDLLESFQSSYPTLRFPPLPKRGDFDLRNVL 945


>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
            vinifera]
          Length = 979

 Score = 1372 bits (3550), Expect = 0.0
 Identities = 670/878 (76%), Positives = 761/878 (86%), Gaps = 2/878 (0%)
 Frame = +2

Query: 5    KESGDRVFIQDPPWISSLFMKSLLFRGRNRS-GVKIEFKEMERRKYYVLRRRQIKAETEA 181
            KES  R+F+QDPPWISS        R R     VK+EF+E ERR Y +LRRRQ+KAETEA
Sbjct: 98   KESIPRIFVQDPPWISSFLFHDWCERNRRTGQNVKLEFRETERRNYGLLRRRQVKAETEA 157

Query: 182  WXXXXXXXXXXXXXXXXXKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAP 361
            W                 KLAPNLP+VK L LGWFEPLREAI+KEQ  QR+KK KAA+AP
Sbjct: 158  WERMVEEYREIEREMCEKKLAPNLPYVKALFLGWFEPLREAIDKEQRAQRTKKQKAAYAP 217

Query: 362  YVDALPADKMAVIVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKK 541
            +++ LPADKMAVIVMHK+MGL+MMG  E+ CVRVV+AAVQIG+AIE EVRIHSFLE+TK 
Sbjct: 218  HIELLPADKMAVIVMHKMMGLVMMG-HEEGCVRVVQAAVQIGMAIEQEVRIHSFLEKTKN 276

Query: 542  HQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCC 721
             +R +    SQE  ++E  ILRKRVKS I++ ++IEVQKLV++EE   WGRDTQAKLG  
Sbjct: 277  FERHKTVGHSQE-GLREKEILRKRVKSFIRKKKIIEVQKLVKNEEITPWGRDTQAKLGSR 335

Query: 722  LIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAG 901
            LI+LLT++AYVQ PVNQSAD PPDVRPAFRH FK  T+ESGQ   +KYGVIECDPLVL G
Sbjct: 336  LIELLTETAYVQTPVNQSADCPPDVRPAFRHTFKTVTKESGQKDWRKYGVIECDPLVLIG 395

Query: 902  LDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQK 1081
            LD+T KHM+IPYVPML+PPKKW+GYDKGGYLFLPSY+MRTHGSR+QQDAVK+VP +Q+QK
Sbjct: 396  LDRTAKHMVIPYVPMLIPPKKWKGYDKGGYLFLPSYVMRTHGSRKQQDAVKSVPRRQLQK 455

Query: 1082 VYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPELLS-DDXXXXXXXX 1258
            V+EALDTLGNTKWR+N+R+LSVVESIWA GGNL GLV+RE+VP+PE  S +D        
Sbjct: 456  VFEALDTLGNTKWRINRRVLSVVESIWARGGNLGGLVDRENVPLPEKPSTEDLTEIQNWK 515

Query: 1259 XXXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSS 1438
                    INQERHS RCDTE+KLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSS
Sbjct: 516  WNARKAKKINQERHSLRCDTEIKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSS 575

Query: 1439 DLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADN 1618
            DLCRG+LEFAEGRPLGKSGLRWLKI LANLY GGVEKLSYDGR++FV+N++ ++FDSADN
Sbjct: 576  DLCRGVLEFAEGRPLGKSGLRWLKIQLANLYAGGVEKLSYDGRLAFVDNHLDDVFDSADN 635

Query: 1619 SLNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRD 1798
             LNGNRWWL AEDPFQCLAACINLSEALRSSSPHTV+SHLPIHQDGSCNGLQHYAALGR+
Sbjct: 636  PLNGNRWWLTAEDPFQCLAACINLSEALRSSSPHTVISHLPIHQDGSCNGLQHYAALGRN 695

Query: 1799 SFEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVK 1978
            S EA+AVNL+AG+KPADVYSEIA RVH IMKRDS KDPATDP ALLAK+LIGQVDRKLVK
Sbjct: 696  SLEASAVNLVAGEKPADVYSEIAARVHEIMKRDSNKDPATDPKALLAKVLIGQVDRKLVK 755

Query: 1979 QTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAI 2158
            QTVMTSVYGVTY+GAREQIKRRL EKGLITD+RLLF+AACYAAKVTLAALGE+FQAAR I
Sbjct: 756  QTVMTSVYGVTYIGAREQIKRRLAEKGLITDERLLFTAACYAAKVTLAALGEIFQAARDI 815

Query: 2159 MGWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRK 2338
            M WLG+CAK+IASENQPV+WTTPLGLPV+QPY K++RH+IRTSLQVLALQREG  V +RK
Sbjct: 816  MAWLGECAKVIASENQPVQWTTPLGLPVIQPYCKSERHLIRTSLQVLALQREGSVVVIRK 875

Query: 2339 QRTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFVDL 2518
            QRTAFPPNFVHSLDGSHMMMTA+ACRD GL FAGVHDSFWTHACDVD+MNQILR+KFV+L
Sbjct: 876  QRTAFPPNFVHSLDGSHMMMTAVACRDAGLCFAGVHDSFWTHACDVDKMNQILREKFVEL 935

Query: 2519 YNMPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2632
            Y+MPILE+LLESF+TS+PTLTFPPLP+RG+FDL +V++
Sbjct: 936  YSMPILENLLESFQTSHPTLTFPPLPDRGNFDLREVLE 973


>gb|EMJ04424.1| hypothetical protein PRUPE_ppa000868mg [Prunus persica]
          Length = 976

 Score = 1353 bits (3503), Expect = 0.0
 Identities = 660/877 (75%), Positives = 749/877 (85%), Gaps = 1/877 (0%)
 Frame = +2

Query: 5    KESGDRVFIQDPPWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYYVLRRRQIKAETEAW 184
            +ES  R+FIQDPPWI+SLF+K +  R      +K+E KE+ERR Y VLRRRQIKAETEAW
Sbjct: 97   QESAPRIFIQDPPWIASLFLKGIYKRANQE--LKLESKEIERRNYNVLRRRQIKAETEAW 154

Query: 185  XXXXXXXXXXXXXXXXXKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPY 364
                             KLAPNLP+VK L LGWFEPLREAI +EQ  Q++KK+KAAFAP+
Sbjct: 155  ERMVDEYKDLEKVMREKKLAPNLPYVKALFLGWFEPLREAIAREQKTQQTKKHKAAFAPH 214

Query: 365  VDALPADKMAVIVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKKH 544
            +D LPADKMA+IVMHK+MGL+M+G  +D CV+VV+AAV IG+AIE EVRIHSFLE+TK  
Sbjct: 215  IDLLPADKMALIVMHKMMGLVMVGN-QDGCVQVVQAAVHIGMAIEQEVRIHSFLEKTKNL 273

Query: 545  QRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCCL 724
            Q+ + G   ++   KE  ILRKRV  LI+R R+ EVQKL+  EE K WGRD QAKLG  L
Sbjct: 274  QKKKTGVADEDGLSKEKEILRKRVNGLIRRKRLNEVQKLLIKEEMKPWGRDKQAKLGSRL 333

Query: 725  IQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAGL 904
            I+LLT++AYVQPP++Q ADSPPDVRPAFRH FK   +  GQ +VK YGVIECDPLVL GL
Sbjct: 334  IELLTETAYVQPPLSQLADSPPDVRPAFRHRFKAVAKSPGQKIVKNYGVIECDPLVLTGL 393

Query: 905  DKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQKV 1084
            DKT KHM+IPYVPMLVPPK+W+GYDKGG+LFLPSY+MRTHGSR+Q DA++ +   QMQKV
Sbjct: 394  DKTAKHMLIPYVPMLVPPKRWKGYDKGGHLFLPSYVMRTHGSRKQVDAMRNISRNQMQKV 453

Query: 1085 YEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPELL-SDDXXXXXXXXX 1261
            +EALD LG+TKWRVNK++LSVVESIWA GGN+AGLVNREDVP+P+   S+D         
Sbjct: 454  FEALDMLGSTKWRVNKKVLSVVESIWARGGNIAGLVNREDVPVPDKSPSEDLKEIQEWKW 513

Query: 1262 XXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSD 1441
                   INQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSD
Sbjct: 514  SVRKAKKINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSD 573

Query: 1442 LCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNS 1621
            LCRG+LEFAEGRPLGKSGLRWLKIHLANLY GGVEKLSY+GR++FV+N+I +IFDSA N 
Sbjct: 574  LCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVEKLSYEGRLAFVDNHIDDIFDSATNP 633

Query: 1622 LNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDS 1801
            +NGNRWWL AEDP QCLAACINLSEAL S SPHTV+SHLPIHQDGSCNGLQHYAALGRDS
Sbjct: 634  VNGNRWWLTAEDPLQCLAACINLSEALNSPSPHTVISHLPIHQDGSCNGLQHYAALGRDS 693

Query: 1802 FEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQ 1981
             EAAAVNL+ GDKPADVYSEIA RVH IMKRDS KDP T P+ALLA++L+ Q+DRKLVKQ
Sbjct: 694  LEAAAVNLVDGDKPADVYSEIAARVHEIMKRDSNKDPTTSPNALLARILVNQIDRKLVKQ 753

Query: 1982 TVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIM 2161
            TVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLF+AACYAAKVTLAALGE+FQAAR IM
Sbjct: 754  TVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFTAACYAAKVTLAALGEIFQAARGIM 813

Query: 2162 GWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQ 2341
             WLGDCAK+IASENQPVRWTTPLGLPVVQPY K++RH+IRTSLQVLALQRE +SV++RKQ
Sbjct: 814  SWLGDCAKVIASENQPVRWTTPLGLPVVQPYCKSERHLIRTSLQVLALQRESNSVDIRKQ 873

Query: 2342 RTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLY 2521
            RTAFPPNFVHSLDGSHMMMTA+ACRD GLRFAGVHDSFWTH CDVD+MN+ILR+KFV+LY
Sbjct: 874  RTAFPPNFVHSLDGSHMMMTALACRDAGLRFAGVHDSFWTHPCDVDQMNEILREKFVELY 933

Query: 2522 NMPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2632
            +MPILESLLESF+ SYP LTFPPLP RGDFDL +V++
Sbjct: 934  SMPILESLLESFQASYPALTFPPLPERGDFDLLQVLE 970


>ref|XP_002325119.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|222866553|gb|EEF03684.1| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 882

 Score = 1351 bits (3496), Expect = 0.0
 Identities = 662/876 (75%), Positives = 754/876 (86%), Gaps = 1/876 (0%)
 Frame = +2

Query: 8    ESGDRVFIQDPPWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYYVLRRRQIKAETEAWX 187
            ES  +VFIQDPPWIS+ F K + ++  N+  VK+EFK++E+RKY +LRRRQI+ ETEAW 
Sbjct: 4    ESSKKVFIQDPPWISAHFWKGM-YKLANKK-VKVEFKDIEKRKYNLLRRRQIREETEAWE 61

Query: 188  XXXXXXXXXXXXXXXXKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYV 367
                            KLAPNLP+VK L+LGWFEPL+EAIEKEQ +++SKK K+AF+P +
Sbjct: 62   RMADEYRGLVREMCERKLAPNLPYVKGLLLGWFEPLKEAIEKEQKMEKSKKQKSAFSPNI 121

Query: 368  DALPADKMAVIVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKKHQ 547
            + LPADKMAVIVMHK+MGLLM+G  ED CVRVV+AAVQIG+AIE EVRIH+FLE+TK +Q
Sbjct: 122  ELLPADKMAVIVMHKMMGLLMVG-HEDGCVRVVQAAVQIGMAIEQEVRIHNFLEKTKNYQ 180

Query: 548  RMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCCLI 727
            R +   E QE   KE  +LRKRV SLI+R R++EVQ LV+ +E K W R TQAKLG  LI
Sbjct: 181  RKKTMHEVQETMDKEKEVLRKRVNSLIRRKRLMEVQNLVKQDETKPWSRGTQAKLGSRLI 240

Query: 728  QLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAGLD 907
            +LLT++AYVQPPVNQS D PPDVRPAFRHIFK  T+  GQ +VKKYGVIECDPL+L GLD
Sbjct: 241  ELLTETAYVQPPVNQSEDIPPDVRPAFRHIFKTLTKNPGQKIVKKYGVIECDPLILTGLD 300

Query: 908  KTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQKVY 1087
             T KHM+IPY PMLVPPKKW+GYDKGG+LFLPSY+MRTHGSRQQQ AV++VP KQMQKV+
Sbjct: 301  GTAKHMLIPYFPMLVPPKKWKGYDKGGHLFLPSYVMRTHGSRQQQVAVRSVPGKQMQKVF 360

Query: 1088 EALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPEL-LSDDXXXXXXXXXX 1264
            EALDTLGNTKWRVN+R+L VVE IW +GGN+AGLV+RED+PIPE   SDD          
Sbjct: 361  EALDTLGNTKWRVNRRLLDVVERIWTSGGNIAGLVDREDIPIPEKPSSDDLTEIQKWKWS 420

Query: 1265 XXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDL 1444
                  INQERHSQRCDTELKLSVARK+KDEEGFYYPHNLDFRGRAYPMHPHL HLSSDL
Sbjct: 421  VRKAKKINQERHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLTHLSSDL 480

Query: 1445 CRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNSL 1624
            CRG+LEF EGRPLGKSGLRWLKIHLANLY GGVEKLS+DGR++FVEN+++EIFDSA N +
Sbjct: 481  CRGVLEFEEGRPLGKSGLRWLKIHLANLYSGGVEKLSHDGRLAFVENHLSEIFDSAKNPV 540

Query: 1625 NGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDSF 1804
            NG RWWLKAEDPFQCLAACINLSEAL S+SPHTV+SHLPIHQDGSCNGLQHYAALGRD+ 
Sbjct: 541  NGKRWWLKAEDPFQCLAACINLSEALNSASPHTVISHLPIHQDGSCNGLQHYAALGRDTL 600

Query: 1805 EAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQT 1984
            EAAAVNL+A +KP+DVYSEIA RVH I++RDS KDPAT+P ALLAK+L+ QVDRKLVKQT
Sbjct: 601  EAAAVNLVAAEKPSDVYSEIAVRVHEIIRRDSNKDPATNPHALLAKILVDQVDRKLVKQT 660

Query: 1985 VMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIMG 2164
            VMTSVYGVTYVGAREQIKRRLEEKG ITDDRLLFSAACY AKVTL ALGELFQAAR IM 
Sbjct: 661  VMTSVYGVTYVGAREQIKRRLEEKGHITDDRLLFSAACYTAKVTLTALGELFQAARDIMS 720

Query: 2165 WLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQR 2344
            WLGDCAKIIASE+QPV+WTTPLGLPVVQPY+KT+RH+I+TSLQ+LALQREG SV+VRKQR
Sbjct: 721  WLGDCAKIIASEDQPVQWTTPLGLPVVQPYYKTERHLIKTSLQILALQREGSSVQVRKQR 780

Query: 2345 TAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLYN 2524
            TAFPPNFVHSLDGSHMMMTA+ACRD GL FAGVHDSFWTHA DVD MN+ILR+KFV+LYN
Sbjct: 781  TAFPPNFVHSLDGSHMMMTAVACRDAGLCFAGVHDSFWTHATDVDLMNRILREKFVELYN 840

Query: 2525 MPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2632
            MPILE+LLE F+TSYPTL FPPLP RG+FDL KV++
Sbjct: 841  MPILENLLEDFQTSYPTLQFPPLPERGNFDLQKVLR 876


>ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
            [Fragaria vesca subsp. vesca]
          Length = 973

 Score = 1342 bits (3472), Expect = 0.0
 Identities = 652/875 (74%), Positives = 753/875 (86%), Gaps = 1/875 (0%)
 Frame = +2

Query: 11   SGDRVFIQDPPWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYYVLRRRQIKAETEAWXX 190
            S  R+FIQDPPWI+SLF+K + F+  N+  +K+E KE++RRKY +LRRRQIKAETEAW  
Sbjct: 96   SEPRIFIQDPPWIASLFLKGM-FKKVNKE-LKVESKEIDRRKYNLLRRRQIKAETEAWEK 153

Query: 191  XXXXXXXXXXXXXXXKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYVD 370
                           KLAP+LP+VK L LGWFEPLREAI KEQ  Q++KK+K AFAP++D
Sbjct: 154  MVEDYKDLERVMREKKLAPSLPYVKALFLGWFEPLREAIAKEQKAQQTKKHKQAFAPHID 213

Query: 371  ALPADKMAVIVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKKHQR 550
             LPADKMA+IVMHK+MGL+MMG  +D CV+VV+AAV IG+AIE EVRIHSFLE++K  QR
Sbjct: 214  LLPADKMALIVMHKLMGLVMMGN-QDGCVQVVQAAVHIGMAIEQEVRIHSFLEKSKSLQR 272

Query: 551  MEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCCLIQ 730
             +     ++   KE  ILRKRV  LI+R R++EVQKL++ E+ K WGRDTQAKLG  LI+
Sbjct: 273  KKTSVADEDGLSKEKEILRKRVNGLIRRKRLVEVQKLLKKEDMKPWGRDTQAKLGSRLIE 332

Query: 731  LLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAGLDK 910
            LLT++A+VQPP++Q AD PPDVRPAFRH  K A +  GQ LVK YGVIECDPLVLAGLDK
Sbjct: 333  LLTETAHVQPPLDQLADGPPDVRPAFRHRLKAAAKSPGQKLVKNYGVIECDPLVLAGLDK 392

Query: 911  TVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQKVYE 1090
            T KHM+IPYVPMLVPPK+W+GYDKGG+LFLPSY+MRTHGSR+Q D ++ +  +QMQKV+E
Sbjct: 393  TAKHMLIPYVPMLVPPKRWKGYDKGGHLFLPSYVMRTHGSRKQVDTMRNISGRQMQKVFE 452

Query: 1091 ALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPELL-SDDXXXXXXXXXXX 1267
            ALD LG+TKWR+NK++L+VVESIWA GGN+AGLV+REDVP+PE   S+D           
Sbjct: 453  ALDMLGSTKWRINKKVLNVVESIWARGGNIAGLVDREDVPVPEKPPSEDPTEIQEWRWSA 512

Query: 1268 XXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLC 1447
                 +NQERHSQRCDTELKLSVAR+MKDE+GFYYPHNLDFRGRAYPMHPHLNHLSSDLC
Sbjct: 513  RKAKKLNQERHSQRCDTELKLSVARRMKDEDGFYYPHNLDFRGRAYPMHPHLNHLSSDLC 572

Query: 1448 RGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNSLN 1627
            RG+LEFAEGRPLGKSGLRWLKIHLANLY GGVEKLSYDGRISFV+N+I +IFDSA N +N
Sbjct: 573  RGVLEFAEGRPLGKSGLRWLKIHLANLYSGGVEKLSYDGRISFVDNHIDDIFDSATNPVN 632

Query: 1628 GNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDSFE 1807
            GNRWWL AEDP QCLAACINLSEAL S SPHTV+SHLPIHQDGSCNGLQHYAALGRD+ E
Sbjct: 633  GNRWWLTAEDPLQCLAACINLSEALNSPSPHTVISHLPIHQDGSCNGLQHYAALGRDTLE 692

Query: 1808 AAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQTV 1987
            AAAVNL+AG+KPADVYSEIA RVH+IMKRDS KDP T+P+ALLAK+L+ Q+DRKLVKQTV
Sbjct: 693  AAAVNLVAGEKPADVYSEIAVRVHDIMKRDSNKDPTTNPNALLAKVLVNQIDRKLVKQTV 752

Query: 1988 MTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIMGW 2167
            MTSVYGVTYVGAREQIKRRLEEKGLITDDRLLF+AACYAAKVTLAALGE+FQAAR IM W
Sbjct: 753  MTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFTAACYAAKVTLAALGEIFQAARGIMSW 812

Query: 2168 LGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQRT 2347
            LGDCAK+IASENQPVRWTTPLGLPVVQPY K++RH+IRTSLQVLALQRE + V+VRKQRT
Sbjct: 813  LGDCAKVIASENQPVRWTTPLGLPVVQPYCKSERHLIRTSLQVLALQRESNLVDVRKQRT 872

Query: 2348 AFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLYNM 2527
            AFPPNFVHSLDGSHMMMTA+ACRD G+RFAGVHDSFWTHACDVD+MNQILR+ FV+LY+ 
Sbjct: 873  AFPPNFVHSLDGSHMMMTALACRDAGIRFAGVHDSFWTHACDVDQMNQILRENFVELYSK 932

Query: 2528 PILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2632
            PILE+LLESF+ +YP LTFPPLP RGDFDL +V++
Sbjct: 933  PILENLLESFQAAYPELTFPPLPERGDFDLQEVLK 967


>ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Populus trichocarpa]
            gi|222854390|gb|EEE91937.1| hypothetical protein
            POPTR_0006s19490g [Populus trichocarpa]
          Length = 982

 Score = 1337 bits (3460), Expect = 0.0
 Identities = 659/876 (75%), Positives = 746/876 (85%), Gaps = 1/876 (0%)
 Frame = +2

Query: 8    ESGDRVFIQDPPWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYYVLRRRQIKAETEAWX 187
            ES  RVFI+D PWIS+L+ K        +  VK+E K++E+RKY +LRRRQI+ ETEAW 
Sbjct: 104  ESSKRVFIRDSPWISALYWKGTHKIANKK--VKLELKDIEKRKYNLLRRRQIREETEAWE 161

Query: 188  XXXXXXXXXXXXXXXXKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYV 367
                            KLAPNLP+VK L LGWFEPL+EAIE+EQ +++SKK K+AF+P +
Sbjct: 162  RMAEEYTGLVKEMCERKLAPNLPYVKSLFLGWFEPLKEAIEREQKLEKSKKQKSAFSPNI 221

Query: 368  DALPADKMAVIVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKKHQ 547
            + LPADKMAVIVMHK+MGL+M+G  ED CVRVV+AAVQIG+AIE EVRIH+FLE+TK HQ
Sbjct: 222  ELLPADKMAVIVMHKMMGLVMVG-HEDGCVRVVQAAVQIGIAIEQEVRIHNFLEKTKNHQ 280

Query: 548  RMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCCLI 727
            R +   + QE   KE  +LRKRV SLI+R R++EVQ LV  +E K W RD QAKLG  LI
Sbjct: 281  RKKTMHDVQESMDKEKEMLRKRVNSLIRRKRLMEVQNLVIQDETKPWNRDKQAKLGSRLI 340

Query: 728  QLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAGLD 907
            +LLT++AYVQPPV+QS   PPDVRPAFRHIFK  T+  GQ  VKKYGVIECDPL+L GLD
Sbjct: 341  ELLTETAYVQPPVDQSEGIPPDVRPAFRHIFKSVTKNPGQKTVKKYGVIECDPLILTGLD 400

Query: 908  KTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQKVY 1087
             T KHM+IPY PMLVPPKKWRGYDKGG+LFLPSY+MRTHGSRQQQDAV++VP KQMQKV+
Sbjct: 401  GTAKHMLIPYFPMLVPPKKWRGYDKGGHLFLPSYIMRTHGSRQQQDAVRSVPGKQMQKVF 460

Query: 1088 EALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPELLS-DDXXXXXXXXXX 1264
            EALDTLGNTKWRVN ++L VVE IWA+GGN AGLVNR D+PIPE LS DD          
Sbjct: 461  EALDTLGNTKWRVNGKVLDVVERIWASGGNNAGLVNRGDIPIPEKLSSDDLTEIQKWKWS 520

Query: 1265 XXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDL 1444
                  INQERHSQRCDTELKLSVARK+KDEEGFYYPHNLDFRGRAYPMHPHL HLSSDL
Sbjct: 521  VRKAKKINQERHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLTHLSSDL 580

Query: 1445 CRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNSL 1624
            CRG+LEFAEGRPLGKSGL WLKIHLANLY GGVEKLS+DGR++FVEN+++EIFDSA+N +
Sbjct: 581  CRGVLEFAEGRPLGKSGLCWLKIHLANLYSGGVEKLSHDGRLAFVENHLSEIFDSAENPV 640

Query: 1625 NGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDSF 1804
            NG RWWL AEDPFQCLAACINLSEAL+S+SPHTV+SHLPIHQDGSCNGLQHYAALGRDS 
Sbjct: 641  NGKRWWLTAEDPFQCLAACINLSEALKSASPHTVISHLPIHQDGSCNGLQHYAALGRDSQ 700

Query: 1805 EAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQT 1984
            EAAAVNL+A +KP+DVYSEIA RVH I++RDS KDPAT+P ALLAK+LI +VDRKLVKQT
Sbjct: 701  EAAAVNLVAAEKPSDVYSEIATRVHEIIRRDSNKDPATNPHALLAKVLIDEVDRKLVKQT 760

Query: 1985 VMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIMG 2164
            VMTSVYGVTYVGAREQIKRRLEEKG ITDDR+LFSAACYAAKVTL ALGELFQAAR IMG
Sbjct: 761  VMTSVYGVTYVGAREQIKRRLEEKGHITDDRVLFSAACYAAKVTLTALGELFQAARDIMG 820

Query: 2165 WLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQR 2344
            WLGDCAK+IASE+QPVRWTTPLGLPVVQPY+KTQRH+IRTSLQVLALQREG SV+VRKQR
Sbjct: 821  WLGDCAKVIASEDQPVRWTTPLGLPVVQPYYKTQRHLIRTSLQVLALQREGSSVQVRKQR 880

Query: 2345 TAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLYN 2524
            TAFPPNFVHSLDGSHMMMTA+ACRD  LRFAGVHDSFWTHA D D MN+ILR+KFV+LYN
Sbjct: 881  TAFPPNFVHSLDGSHMMMTAVACRDADLRFAGVHDSFWTHARDADLMNRILREKFVELYN 940

Query: 2525 MPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2632
            MPILE+LLE F+TSYPTL FP LP RG+FDL +V++
Sbjct: 941  MPILENLLEDFQTSYPTLKFPSLPERGNFDLQEVLR 976


>gb|EOY31496.1| DNA/RNA polymerases superfamily protein isoform 1 [Theobroma cacao]
          Length = 978

 Score = 1337 bits (3459), Expect = 0.0
 Identities = 652/878 (74%), Positives = 770/878 (87%), Gaps = 3/878 (0%)
 Frame = +2

Query: 8    ESGDRVFIQDPPWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYYVLRRRQIKAETEAWX 187
            ES  R+FIQDPPWIS+LF+K L ++  N++ VKIE KE+E+RKY +LRRRQ+K ETEAW 
Sbjct: 99   ESTPRLFIQDPPWISALFLKGL-YKMTNQT-VKIEHKEIEKRKYNLLRRRQVKEETEAWE 156

Query: 188  XXXXXXXXXXXXXXXXKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQR--SKKNKAAFAP 361
                            KLAPNLP+VK L LGWFEP+REAI +EQ VQ+  SKK +AA+AP
Sbjct: 157  KMVEEYRELQREMCEKKLAPNLPYVKGLFLGWFEPMREAIAREQKVQKGKSKKLRAAYAP 216

Query: 362  YVDALPADKMAVIVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKK 541
            +++ LPADKMAVIVMHK+MGL+M G +E+  V+VV+AAV IGVAIE EVRIH+FLE+TK 
Sbjct: 217  HIELLPADKMAVIVMHKMMGLVM-GAQENGFVQVVQAAVHIGVAIEQEVRIHNFLEKTKN 275

Query: 542  HQRMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCC 721
            +QR +   E Q  S KE  IL+KRV SLI+R R++EVQKLV++EE K WGRD QAKLG  
Sbjct: 276  YQRKKTTDEVQGLS-KEKEILKKRVNSLIRRRRLVEVQKLVKNEEIKPWGRDAQAKLGSR 334

Query: 722  LIQLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAG 901
            L++LLT++AYVQPP++QS DSPPDV+PAFRH FK  +++ G+ ++K+YGVIECDPL+L+G
Sbjct: 335  LLELLTETAYVQPPIDQSGDSPPDVQPAFRHKFKTISKDPGKKMMKRYGVIECDPLILSG 394

Query: 902  LDKTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQK 1081
            LD++ KHM+IPYVPMLVPPKKW+GYDKGGYLFLPSY+MRTHGSR+QQDA+K V  K+MQK
Sbjct: 395  LDRSAKHMLIPYVPMLVPPKKWKGYDKGGYLFLPSYVMRTHGSRKQQDALKGVHVKKMQK 454

Query: 1082 VYEALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPEL-LSDDXXXXXXXX 1258
            V+EALDTLG+TKWRVNK++L+VVESIWA+GGN+AGLV+R D+PIPE   S+D        
Sbjct: 455  VFEALDTLGSTKWRVNKKVLAVVESIWASGGNIAGLVDRNDIPIPEKPSSEDSTESQEWK 514

Query: 1259 XXXXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSS 1438
                    IN+ERHSQRCDTELKLSVARKM++EEGFYYPHNLDFRGRAYPMHPHLNHLSS
Sbjct: 515  WSVRKANKINRERHSQRCDTELKLSVARKMENEEGFYYPHNLDFRGRAYPMHPHLNHLSS 574

Query: 1439 DLCRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADN 1618
            DLCRG+LEFAEGRPLG+SGL WLKIHLANL+ GGVEKLS+DGR++FV+N++ +IFDSA+N
Sbjct: 575  DLCRGVLEFAEGRPLGRSGLHWLKIHLANLFAGGVEKLSHDGRLAFVDNHLDDIFDSAEN 634

Query: 1619 SLNGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRD 1798
             +NGNRWWL AEDPFQCLAACINLSE+L+SSSPH+V+S+LPIHQDGSCNGLQHYAALGRD
Sbjct: 635  PINGNRWWLTAEDPFQCLAACINLSESLKSSSPHSVLSYLPIHQDGSCNGLQHYAALGRD 694

Query: 1799 SFEAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVK 1978
            S EAAAVNL+AG+KPADVYSEIA RVHNIMKRDS+KDPAT+P+A LAKLLI QVDRKLVK
Sbjct: 695  SLEAAAVNLVAGEKPADVYSEIAVRVHNIMKRDSDKDPATNPNASLAKLLIDQVDRKLVK 754

Query: 1979 QTVMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAI 2158
            QTVMTSVYGVT+VGAREQIKRRLEEKG ITDDR+LF+AACY AKVTLAALGELFQAAR I
Sbjct: 755  QTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRVLFAAACYTAKVTLAALGELFQAARNI 814

Query: 2159 MGWLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRK 2338
            MGWLGDCAK+IASENQPV+WTTPLGLPVVQPY+K++RH+IRTSLQVLALQREGDSVEVRK
Sbjct: 815  MGWLGDCAKVIASENQPVQWTTPLGLPVVQPYYKSERHLIRTSLQVLALQREGDSVEVRK 874

Query: 2339 QRTAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFVDL 2518
            QRTAFPPNFVHSLDGSHMMMTA+ACRD GL FAGVHDSFWTHACDV++MNQILR+KFV+L
Sbjct: 875  QRTAFPPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVEKMNQILREKFVEL 934

Query: 2519 YNMPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2632
            Y+MP+LE+L ES +TSYP+L FPPLP RG+FDL +V++
Sbjct: 935  YSMPVLENLFESVQTSYPSLVFPPLPERGNFDLREVLK 972


>ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Citrus
            sinensis]
          Length = 1009

 Score = 1330 bits (3441), Expect = 0.0
 Identities = 644/873 (73%), Positives = 754/873 (86%), Gaps = 2/873 (0%)
 Frame = +2

Query: 20   RVFIQDPPWISSLFMKSLLFRGRNRSGVKI-EFKEMERRKYYVLRRRQIKAETEAWXXXX 196
            R+F+QDPPW SS+F+K L  R      +K+ E++EM++RK+ +LRRRQ+K ETEAW    
Sbjct: 138  RIFVQDPPWFSSIFLKGLYKR------IKLQEYREMKKRKFNLLRRRQVKQETEAWERMV 191

Query: 197  XXXXXXXXXXXXXKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYVDAL 376
                         +LAPNLPH+K L LGWF PLREAIE+EQ +QR+KK KAA+AP+++ L
Sbjct: 192  DEYKELEAKMIEKRLAPNLPHIKGLFLGWFGPLREAIEREQKMQRTKKQKAAYAPHIELL 251

Query: 377  PADKMAVIVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKKHQRME 556
            PADK+AVIVMHK+MGL+M  G EDRCV+VV+AAV IG+AIE E+RIHSFLE+TK ++R +
Sbjct: 252  PADKVAVIVMHKMMGLVM-AGHEDRCVQVVQAAVHIGMAIEQEIRIHSFLEKTKNYKRKK 310

Query: 557  VGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCCLIQLL 736
            + A+++E   KE  +LRKRV SLIK  RV+E QKL+++EE K WGRDTQAKLG  L++LL
Sbjct: 311  IIADTEEVLSKEKELLRKRVNSLIKSKRVMEAQKLLKNEETKPWGRDTQAKLGSRLVELL 370

Query: 737  TQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAGLDKTV 916
             ++AYVQ PVN +  SPPDVRPAFRH FK   +  GQ   K+YGV+ECDPLVLAGLD++ 
Sbjct: 371  IETAYVQHPVNPADYSPPDVRPAFRHRFKTILKHPGQKTTKRYGVVECDPLVLAGLDRSA 430

Query: 917  KHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQKVYEAL 1096
            KHM+IPYVPMLVPPKKW+GY+KGGYLFLPSY+MRTHGSR+QQ+A+K+V    M+KV+EAL
Sbjct: 431  KHMLIPYVPMLVPPKKWKGYNKGGYLFLPSYVMRTHGSRKQQEALKSVTGNCMKKVFEAL 490

Query: 1097 DTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPEL-LSDDXXXXXXXXXXXXX 1273
            DTLG+TKWRVNK++LSV+ESIW +GGN+AGLV+R DVPIPE  LS+D             
Sbjct: 491  DTLGSTKWRVNKQVLSVLESIWVSGGNIAGLVDRNDVPIPEKPLSEDMTEVQKWKWSVRK 550

Query: 1274 XXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG 1453
               INQERHSQRCDTELKLSVAR+MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSD+CRG
Sbjct: 551  AKKINQERHSQRCDTELKLSVARRMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDVCRG 610

Query: 1454 ILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNSLNGN 1633
            +LEFAEGRPLGKSGLRWLKIHLANL+ GGVEKLS+DGR++FVEN++ EIFDSA+N +NG+
Sbjct: 611  VLEFAEGRPLGKSGLRWLKIHLANLFSGGVEKLSHDGRLAFVENHLYEIFDSAENPINGS 670

Query: 1634 RWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDSFEAA 1813
            RWWL AEDPFQCLAACINLSEAL+SSSPH+V+SHLPIHQDGSCNGLQHYAALGR++ EAA
Sbjct: 671  RWWLTAEDPFQCLAACINLSEALKSSSPHSVISHLPIHQDGSCNGLQHYAALGRNTLEAA 730

Query: 1814 AVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQTVMT 1993
            AVNL+AG+KPADVYSEIA RVH IMKRDS KDP+  P ALLAK+LI QVDRKLVKQTVMT
Sbjct: 731  AVNLVAGEKPADVYSEIAVRVHEIMKRDSNKDPSKHPQALLAKILIDQVDRKLVKQTVMT 790

Query: 1994 SVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIMGWLG 2173
            SVYGVT+VGAREQIKRRLEEKG ITDDR LF+AACYAAKVTL ALGE+F+AAR+IMGWLG
Sbjct: 791  SVYGVTFVGAREQIKRRLEEKGHITDDRQLFAAACYAAKVTLTALGEIFEAARSIMGWLG 850

Query: 2174 DCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQRTAF 2353
            DCAK+IASENQPVRWTTPLGLPVVQPY K +RH+IRTSLQVLALQREG SVE+RKQRTAF
Sbjct: 851  DCAKVIASENQPVRWTTPLGLPVVQPYCKNERHLIRTSLQVLALQREGKSVEIRKQRTAF 910

Query: 2354 PPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLYNMPI 2533
            PPNFVHSLDGSHMMMTA+ACRD GL FAGVHDSFWTHACDVD MNQILR+KFV+LYNMPI
Sbjct: 911  PPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDEMNQILRKKFVELYNMPI 970

Query: 2534 LESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2632
            LE+LLESF+TSYPTL+FPPLP RG+FDL +V++
Sbjct: 971  LENLLESFQTSYPTLSFPPLPERGNFDLEEVLE 1003


>ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citrus clementina]
            gi|557556792|gb|ESR66806.1| hypothetical protein
            CICLE_v10007333mg [Citrus clementina]
          Length = 1012

 Score = 1313 bits (3397), Expect = 0.0
 Identities = 637/873 (72%), Positives = 749/873 (85%), Gaps = 2/873 (0%)
 Frame = +2

Query: 20   RVFIQDPPWISSLFMKSLLFRGRNRSGVKI-EFKEMERRKYYVLRRRQIKAETEAWXXXX 196
            R+F+QDPPW SS+F+K L  R      +K+ E++EM++RK+ +LRRRQ+K ETEAW    
Sbjct: 141  RIFVQDPPWFSSIFLKGLYKR------IKLQEYREMKKRKFNLLRRRQVKQETEAWERMV 194

Query: 197  XXXXXXXXXXXXXKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYVDAL 376
                         +LAPNLPH+K L LGWF PL EAIE+EQ +QR+KK KAA+AP+++ L
Sbjct: 195  DEYKELEAKMIEKRLAPNLPHIKGLFLGWFGPLSEAIEREQKMQRTKKQKAAYAPHIELL 254

Query: 377  PADKMAVIVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKKHQRME 556
            PADKMAVIVMHK+MGL+M  G EDRCV+VV+AAV IG+AIE E+RIHSFLE+TK ++R +
Sbjct: 255  PADKMAVIVMHKMMGLVM-AGHEDRCVQVVQAAVHIGMAIEQEIRIHSFLEKTKNYKRKK 313

Query: 557  VGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCCLIQLL 736
            + A+++E   KE  +LRKRV SLIK  RV+E QKL+++EE K WGRDTQAKLG  L++LL
Sbjct: 314  IIADTEEVLSKEKELLRKRVNSLIKSKRVMEAQKLLKNEETKPWGRDTQAKLGSRLVELL 373

Query: 737  TQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAGLDKTV 916
             ++AYVQ PVN +  SPPDVRPAFRH FK   +  GQ   K+YGV+ECDPLVL GLD++ 
Sbjct: 374  IETAYVQHPVNPADYSPPDVRPAFRHRFKTILKHPGQKTTKRYGVVECDPLVLEGLDRSA 433

Query: 917  KHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQKVYEAL 1096
            KHM+IPYVPMLVPPKKW+GY+KGGYLFLPSY+MRTHGSR+QQ+A+K+V    M+KV+EAL
Sbjct: 434  KHMLIPYVPMLVPPKKWKGYNKGGYLFLPSYVMRTHGSRKQQEALKSVTGNCMKKVFEAL 493

Query: 1097 DTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPEL-LSDDXXXXXXXXXXXXX 1273
            DTLG+TKWRVNK++LSV+ESIW +GGN+AGLV+R DV IPE  LS+D             
Sbjct: 494  DTLGSTKWRVNKQVLSVLESIWVSGGNIAGLVDRNDVLIPEKPLSEDMTEVQKWKWSVRK 553

Query: 1274 XXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG 1453
               INQERHSQRCDTELKLSVAR+MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSD+CRG
Sbjct: 554  AKKINQERHSQRCDTELKLSVARRMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDVCRG 613

Query: 1454 ILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNSLNGN 1633
            +LEFAEGRPLGKSGLRWLKIHLANL+ GGVEKLS+DGR++FVEN++ EIFDSA+N +NG+
Sbjct: 614  VLEFAEGRPLGKSGLRWLKIHLANLFSGGVEKLSHDGRLAFVENHLYEIFDSAENPINGS 673

Query: 1634 RWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDSFEAA 1813
            RWWL AEDPFQCLAACINL+EAL+SSSPH+V+SHLPIHQDGSCNGLQHYAALGR++ EAA
Sbjct: 674  RWWLTAEDPFQCLAACINLAEALKSSSPHSVISHLPIHQDGSCNGLQHYAALGRNTLEAA 733

Query: 1814 AVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQTVMT 1993
            AVNL+AG+KPADVYSEIA RVH IMKRDS KD +  P ALLAK+LI QVDRKLVKQTVMT
Sbjct: 734  AVNLVAGEKPADVYSEIAVRVHEIMKRDSNKDHSKHPQALLAKILIDQVDRKLVKQTVMT 793

Query: 1994 SVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIMGWLG 2173
            SVYGVT+VGAREQIKRRLEEKG ITDDR LF+AACYAAKVTL ALGE+F+AAR+IMGWLG
Sbjct: 794  SVYGVTFVGAREQIKRRLEEKGHITDDRQLFAAACYAAKVTLTALGEIFEAARSIMGWLG 853

Query: 2174 DCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQRTAF 2353
            DCAK+IASENQPVRWTTPLGLPVVQPY K +RH+IRTSLQVLALQREG+ VE+RKQRTAF
Sbjct: 854  DCAKVIASENQPVRWTTPLGLPVVQPYCKNERHLIRTSLQVLALQREGNLVEIRKQRTAF 913

Query: 2354 PPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLYNMPI 2533
            PPNFVHSLDGSHMMMTA+ACRD GL FAGVHDSFWTHACDVD MNQILR+KFV+LYNMP+
Sbjct: 914  PPNFVHSLDGSHMMMTAVACRDAGLHFAGVHDSFWTHACDVDEMNQILRKKFVELYNMPM 973

Query: 2534 LESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2632
            LE+LLESF+TSYPTL+FP LP RG+FDL +V++
Sbjct: 974  LENLLESFQTSYPTLSFPSLPERGNFDLEEVLE 1006


>ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Cucumis
            sativus]
          Length = 975

 Score = 1313 bits (3397), Expect = 0.0
 Identities = 641/875 (73%), Positives = 744/875 (85%)
 Frame = +2

Query: 8    ESGDRVFIQDPPWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYYVLRRRQIKAETEAWX 187
            ES  R+FIQDPPWI+SLF+K L    +    VK+EF E+E+RKY +LRRRQIKAETEAW 
Sbjct: 99   ESSKRIFIQDPPWIASLFLKGLYKCVQKE--VKLEFMEIEKRKYNLLRRRQIKAETEAWE 156

Query: 188  XXXXXXXXXXXXXXXXKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYV 367
                            KLAPNLP+VKKL LGWFEPL+ AIE+EQ  QRSKK KAAFAP++
Sbjct: 157  KMVEEYKELEREMCEKKLAPNLPYVKKLFLGWFEPLKNAIEEEQKTQRSKKQKAAFAPHI 216

Query: 368  DALPADKMAVIVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKKHQ 547
            + L ADKMAVIVM+K+MGLLMM   +D CV+VV+AAVQIG AIE EVRI S LE+ + +Q
Sbjct: 217  ELLSADKMAVIVMYKMMGLLMMAA-QDGCVQVVQAAVQIGGAIEQEVRIQSILEKARSNQ 275

Query: 548  RMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCCLI 727
            R +V A++ E   KE  +LRK+V  LI+R ++ EVQKL++ EEFK+WGRDTQAKLG  LI
Sbjct: 276  RTKVRADT-ECLTKEKEVLRKQVNGLIRRRKLKEVQKLLKKEEFKAWGRDTQAKLGSRLI 334

Query: 728  QLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAGLD 907
            +LL +SA++QPPV+QSADSPPD+RPAF H FK   +  GQ+ VKKYGV+ECDP+VLAGLD
Sbjct: 335  ELLIESAFIQPPVSQSADSPPDIRPAFWHGFKPVAKTPGQNFVKKYGVVECDPIVLAGLD 394

Query: 908  KTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQKVY 1087
            +T KHM+IPY+PMLVPPKKW+GYDKGG+ FLPSY+MRTHGS +QQDA+K +  KQMQKV+
Sbjct: 395  RTAKHMLIPYIPMLVPPKKWKGYDKGGHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVF 454

Query: 1088 EALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPELLSDDXXXXXXXXXXX 1267
            EALD LG+TKWRVN+ +LSVVES+WA GGN AGLV+R+DVPIPE    D           
Sbjct: 455  EALDMLGSTKWRVNRSVLSVVESLWAQGGNTAGLVDRKDVPIPEKPLGDLTEMQEWRWSM 514

Query: 1268 XXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLC 1447
                 INQE HSQRCD ELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLC
Sbjct: 515  KKAKKINQELHSQRCDVELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLC 574

Query: 1448 RGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNSLN 1627
            RG+LEFAEGRPLGKSGL WLKIHLANLY GGVEKLSYD R++FV++++  IFDSA N +N
Sbjct: 575  RGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVEKLSYDERLAFVDDHLDNIFDSASNPVN 634

Query: 1628 GNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDSFE 1807
            G+RWWL AEDPFQCLAAC+NLSEAL+SS+PHTV+S+LPIHQDGSCNGLQHYAALGRD+ E
Sbjct: 635  GDRWWLTAEDPFQCLAACMNLSEALKSSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLE 694

Query: 1808 AAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQTV 1987
            AAAVNL+AG+KPADVYSEIA RVH IM RD+ KDP T+P+A LAKLLI QVDRKLVKQTV
Sbjct: 695  AAAVNLVAGEKPADVYSEIAARVHTIMIRDASKDPTTNPNASLAKLLIDQVDRKLVKQTV 754

Query: 1988 MTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIMGW 2167
            MTSVYGVTY+GAREQIKRRLEEKGLI+DDRL F A+CYAAKVTL+ALGE+F+AAR IMGW
Sbjct: 755  MTSVYGVTYIGAREQIKRRLEEKGLISDDRLRFRASCYAAKVTLSALGEIFEAARGIMGW 814

Query: 2168 LGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQRT 2347
            LGDCAK+IA +NQPVRWTTPLGLPVVQPY+K++RH+IRTSLQVLALQREG+ V+VRKQRT
Sbjct: 815  LGDCAKVIAKDNQPVRWTTPLGLPVVQPYYKSERHLIRTSLQVLALQREGNLVDVRKQRT 874

Query: 2348 AFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLYNM 2527
            AFPPNFVHSLDGSHMM+TA+ACRD GLRFAGVHDSFWTHACDVDRMN ILR+KFV+LY+M
Sbjct: 875  AFPPNFVHSLDGSHMMLTALACRDAGLRFAGVHDSFWTHACDVDRMNLILREKFVELYSM 934

Query: 2528 PILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2632
            P+LESLLE FET+YP LTFP LP RGDFDL +V++
Sbjct: 935  PVLESLLEGFETTYPGLTFPSLPGRGDFDLQEVLK 969


>ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Cucumis
            sativus]
          Length = 975

 Score = 1310 bits (3390), Expect = 0.0
 Identities = 640/875 (73%), Positives = 743/875 (84%)
 Frame = +2

Query: 8    ESGDRVFIQDPPWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYYVLRRRQIKAETEAWX 187
            ES  R+FIQDPPWI+SLF+K L    +    VK+EF E+E+RKY +LRRRQIKAETEAW 
Sbjct: 99   ESSKRIFIQDPPWIASLFLKGLYKCVQKE--VKLEFMEIEKRKYNLLRRRQIKAETEAWE 156

Query: 188  XXXXXXXXXXXXXXXXKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYV 367
                            KLAPNLP+VKKL LGWFEPL+ AIE+EQ  QRSKK KAAFAP++
Sbjct: 157  KMVEEYKELEREMCEKKLAPNLPYVKKLFLGWFEPLKNAIEEEQKTQRSKKQKAAFAPHI 216

Query: 368  DALPADKMAVIVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKKHQ 547
            + L ADKMA IVM+K+MGLLMM   +D CV+VV+AAVQIG AIE EVRI S LE+ + +Q
Sbjct: 217  ELLSADKMAGIVMYKMMGLLMMAA-QDGCVQVVQAAVQIGGAIEQEVRIQSILEKARSNQ 275

Query: 548  RMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCCLI 727
            R +V A++ E   KE  +LRK+V  LI+R ++ EVQKL++ EEFK+WGRDTQAKLG  LI
Sbjct: 276  RTKVRADT-ECLTKEKEVLRKQVNGLIRRRKLKEVQKLLKKEEFKAWGRDTQAKLGSRLI 334

Query: 728  QLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAGLD 907
            +LL +SA++QPPV+QSADSPPD+RPAF H FK   +  GQ+ VKKYGV+ECDP+VLAGLD
Sbjct: 335  ELLIESAFIQPPVSQSADSPPDIRPAFWHGFKPVAKTPGQNFVKKYGVVECDPIVLAGLD 394

Query: 908  KTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQKVY 1087
            +T KHM+IPY+PMLVPPKKW+GYDKGG+ FLPSY+MRTHGS +QQDA+K +  KQMQKV+
Sbjct: 395  RTAKHMLIPYIPMLVPPKKWKGYDKGGHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVF 454

Query: 1088 EALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPELLSDDXXXXXXXXXXX 1267
            EALD LG+TKWRVN+ +LSVVES+WA GGN AGLV+R+DVPIPE    D           
Sbjct: 455  EALDMLGSTKWRVNRSVLSVVESLWAQGGNTAGLVDRKDVPIPEKPLGDLTEMQEWRWSM 514

Query: 1268 XXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLC 1447
                 INQE HSQRCD ELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLC
Sbjct: 515  KKAKKINQELHSQRCDVELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLC 574

Query: 1448 RGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNSLN 1627
            RG+LEFAEGRPLGKSGL WLKIHLANLY GGVEKLSYD R++FV++++  IFDSA N +N
Sbjct: 575  RGVLEFAEGRPLGKSGLHWLKIHLANLYAGGVEKLSYDERLAFVDDHLDNIFDSASNPVN 634

Query: 1628 GNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDSFE 1807
            G+RWWL AEDPFQCLAAC+NLSEAL+SS+PHTV+S+LPIHQDGSCNGLQHYAALGRD+ E
Sbjct: 635  GDRWWLTAEDPFQCLAACMNLSEALKSSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLE 694

Query: 1808 AAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQTV 1987
            AAAVNL+AG+KPADVYSEIA RVH IM RD+ KDP T+P+A LAKLLI QVDRKLVKQTV
Sbjct: 695  AAAVNLVAGEKPADVYSEIAARVHTIMIRDASKDPTTNPNASLAKLLIDQVDRKLVKQTV 754

Query: 1988 MTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIMGW 2167
            MTSVYGVTY+GAREQIKRRLEEKGLI+DDRL F A+CYAAKVTL+ALGE+F+AAR IMGW
Sbjct: 755  MTSVYGVTYIGAREQIKRRLEEKGLISDDRLRFRASCYAAKVTLSALGEIFEAARGIMGW 814

Query: 2168 LGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQRT 2347
            LGDCAK+IA +NQPVRWTTPLGLPVVQPY+K++RH+IRTSLQVLALQREG+ V+VRKQRT
Sbjct: 815  LGDCAKVIAKDNQPVRWTTPLGLPVVQPYYKSERHLIRTSLQVLALQREGNLVDVRKQRT 874

Query: 2348 AFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLYNM 2527
            AFPPNFVHSLDGSHMM+TA+ACRD GLRFAGVHDSFWTHACDVDRMN ILR+KFV+LY+M
Sbjct: 875  AFPPNFVHSLDGSHMMLTALACRDAGLRFAGVHDSFWTHACDVDRMNLILREKFVELYSM 934

Query: 2528 PILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2632
            P+LESLLE FET+YP LTFP LP RGDFDL +V++
Sbjct: 935  PVLESLLEGFETTYPGLTFPSLPGRGDFDLQEVLK 969


>emb|CBI36559.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score = 1310 bits (3389), Expect = 0.0
 Identities = 634/800 (79%), Positives = 719/800 (89%), Gaps = 1/800 (0%)
 Frame = +2

Query: 236  KLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYVDALPADKMAVIVMHKI 415
            KLAPNLP+VK L LGWFEPLREAI+KEQ  QR+KK KAA+AP+++ LPADKMAVIVMHK+
Sbjct: 5    KLAPNLPYVKALFLGWFEPLREAIDKEQRAQRTKKQKAAYAPHIELLPADKMAVIVMHKM 64

Query: 416  MGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKKHQRMEVGAESQEDSIKEA 595
            MGL+MMG  E+ CVRVV+AAVQIG+AIE EVRIHSFLE+TK  +R +    SQE  ++E 
Sbjct: 65   MGLVMMG-HEEGCVRVVQAAVQIGMAIEQEVRIHSFLEKTKNFERHKTVGHSQE-GLREK 122

Query: 596  AILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCCLIQLLTQSAYVQPPVNQS 775
             ILRKRVKS I++ ++IEVQKLV++EE   WGRDTQAKLG  LI+LLT++AYVQ PVNQS
Sbjct: 123  EILRKRVKSFIRKKKIIEVQKLVKNEEITPWGRDTQAKLGSRLIELLTETAYVQTPVNQS 182

Query: 776  ADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAGLDKTVKHMIIPYVPMLVP 955
            AD PPDVRPAFRH FK  T+ESGQ   +KYGVIECDPLVL GLD+T KHM+IPYVPML+P
Sbjct: 183  ADCPPDVRPAFRHTFKTVTKESGQKDWRKYGVIECDPLVLIGLDRTAKHMVIPYVPMLIP 242

Query: 956  PKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQKVYEALDTLGNTKWRVNKR 1135
            PKKW+GYDKGGYLFLPSY+MRTHGSR+QQDAVK+VP +Q+QKV+EALDTLGNTKWR+N+R
Sbjct: 243  PKKWKGYDKGGYLFLPSYVMRTHGSRKQQDAVKSVPRRQLQKVFEALDTLGNTKWRINRR 302

Query: 1136 ILSVVESIWAAGGNLAGLVNREDVPIPELLS-DDXXXXXXXXXXXXXXXXINQERHSQRC 1312
            +LSVVESIWA GGNL GLV+RE+VP+PE  S +D                INQERHS RC
Sbjct: 303  VLSVVESIWARGGNLGGLVDRENVPLPEKPSTEDLTEIQNWKWNARKAKKINQERHSLRC 362

Query: 1313 DTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKS 1492
            DTE+KLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFAEGRPLGKS
Sbjct: 363  DTEIKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKS 422

Query: 1493 GLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNSLNGNRWWLKAEDPFQCL 1672
            GLRWLKI LANLY GGVEKLSYDGR++FV+N++ ++FDSADN LNGNRWWL AEDPFQCL
Sbjct: 423  GLRWLKIQLANLYAGGVEKLSYDGRLAFVDNHLDDVFDSADNPLNGNRWWLTAEDPFQCL 482

Query: 1673 AACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLIAGDKPADV 1852
            AACINLSEALRSSSPHTV+SHLPIHQDGSCNGLQHYAALGR+S EA+AVNL+AG+KPADV
Sbjct: 483  AACINLSEALRSSSPHTVISHLPIHQDGSCNGLQHYAALGRNSLEASAVNLVAGEKPADV 542

Query: 1853 YSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQTVMTSVYGVTYVGAREQ 2032
            YSEIA RVH IMKRDS KDPATDP ALLAK+LIGQVDRKLVKQTVMTSVYGVTY+GAREQ
Sbjct: 543  YSEIAARVHEIMKRDSNKDPATDPKALLAKVLIGQVDRKLVKQTVMTSVYGVTYIGAREQ 602

Query: 2033 IKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIMGWLGDCAKIIASENQPV 2212
            IKRRL EKGLITD+RLLF+AACYAAKVTLAALGE+FQAAR IM WLG+CAK+IASENQPV
Sbjct: 603  IKRRLAEKGLITDERLLFTAACYAAKVTLAALGEIFQAARDIMAWLGECAKVIASENQPV 662

Query: 2213 RWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQRTAFPPNFVHSLDGSHM 2392
            +WTTPLGLPV+QPY K++RH+IRTSLQVLALQREG  V +RKQRTAFPPNFVHSLDGSHM
Sbjct: 663  QWTTPLGLPVIQPYCKSERHLIRTSLQVLALQREGSVVVIRKQRTAFPPNFVHSLDGSHM 722

Query: 2393 MMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLYNMPILESLLESFETSYP 2572
            MMTA+ACRD GL FAGVHDSFWTHACDVD+MNQILR+KFV+LY+MPILE+LLESF+TS+P
Sbjct: 723  MMTAVACRDAGLCFAGVHDSFWTHACDVDKMNQILREKFVELYSMPILENLLESFQTSHP 782

Query: 2573 TLTFPPLPNRGDFDLNKVVQ 2632
            TLTFPPLP+RG+FDL +V++
Sbjct: 783  TLTFPPLPDRGNFDLREVLE 802


>gb|EOY31497.1| DNA/RNA polymerases superfamily protein isoform 2 [Theobroma cacao]
          Length = 857

 Score = 1304 bits (3374), Expect = 0.0
 Identities = 635/848 (74%), Positives = 746/848 (87%), Gaps = 4/848 (0%)
 Frame = +2

Query: 101  VKIEFKEMERRKYYVLRRRQIKAETEAWXXXXXXXXXXXXXXXXXKLAPNLPHVKKLMLG 280
            VKIE KE+E+RKY +LRRRQ+K ETEAW                 KLAPNLP+VK L LG
Sbjct: 6    VKIEHKEIEKRKYNLLRRRQVKEETEAWEKMVEEYRELQREMCEKKLAPNLPYVKGLFLG 65

Query: 281  WFEPLREAIEKEQNVQR--SKKNKAAFAPYVDALPADKMAVIVMHKIMGLLMMGGKEDRC 454
            WFEP+REAI +EQ VQ+  SKK +AA+AP+++ LPADKMAVIVMHK+MGL+M G +E+  
Sbjct: 66   WFEPMREAIAREQKVQKGKSKKLRAAYAPHIELLPADKMAVIVMHKMMGLVM-GAQENGF 124

Query: 455  VRVVEAAVQIGVAIEHEVRIHSFLERTKKHQRMEVGAESQEDSIKEAAILRKRVKSLIKR 634
            V+VV+AAV IGVAIE EVRIH+FLE+TK +QR +   E Q  S KE  IL+KRV SLI+R
Sbjct: 125  VQVVQAAVHIGVAIEQEVRIHNFLEKTKNYQRKKTTDEVQGLS-KEKEILKKRVNSLIRR 183

Query: 635  NRVIEVQKLVRSEEFKSWGRDTQAKLGCCLIQLLTQSAYVQPPVNQSADSPPDVRPAFRH 814
             R++EVQKLV++EE K WGRD QAKLG  L++LLT++AYVQPP++QS DSPPDV+PAFRH
Sbjct: 184  RRLVEVQKLVKNEEIKPWGRDAQAKLGSRLLELLTETAYVQPPIDQSGDSPPDVQPAFRH 243

Query: 815  IFKIATRESGQSLVKKYGVIECDPLVLAGLDKTVKHMIIPYVPMLVPPKKWRGYDKGGYL 994
             FK  +++ G+ ++K+YGVIECDPL+L+GLD++ KHM+IPYVPMLVPPKKW+GYDKGGYL
Sbjct: 244  KFKTISKDPGKKMMKRYGVIECDPLILSGLDRSAKHMLIPYVPMLVPPKKWKGYDKGGYL 303

Query: 995  FLPSYLMRTHGSRQQQDAVKAVPTKQMQKVYEALDTLGNTKWRVNKRILSVVESIWAAGG 1174
            FLPSY+MRTHGSR+QQDA+K V  K+MQKV+EALDTLG+TKWRVNK++L+VVESIWA+GG
Sbjct: 304  FLPSYVMRTHGSRKQQDALKGVHVKKMQKVFEALDTLGSTKWRVNKKVLAVVESIWASGG 363

Query: 1175 NLAGLVNREDVPIPEL-LSDDXXXXXXXXXXXXXXXXINQERHSQRCDTELKLSVARKMK 1351
            N+AGLV+R D+PIPE   S+D                IN+ERHSQRCDTELKLSVARKM+
Sbjct: 364  NIAGLVDRNDIPIPEKPSSEDSTESQEWKWSVRKANKINRERHSQRCDTELKLSVARKME 423

Query: 1352 DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLANLY 1531
            +EEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFAEGRPLG+SGL WLKIHLANL+
Sbjct: 424  NEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGLHWLKIHLANLF 483

Query: 1532 GGGVEKLSYDGRISFVENYIAEIFDSADNSLNGNRWWLKAEDPFQCLAACINLSEALRSS 1711
             GGVEKLS+DGR++FV+N++ +IFDSA+N +NGNRWWL AEDPFQCLAACINLSE+L+SS
Sbjct: 484  AGGVEKLSHDGRLAFVDNHLDDIFDSAENPINGNRWWLTAEDPFQCLAACINLSESLKSS 543

Query: 1712 SPHTVVSHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLIAGDKPADVYSEIAERVHNIMK 1891
            SPH+V+S+LPIHQDGSCNGLQHYAALGRDS EAAAVNL+AG+KPADVYSEIA RVHNIMK
Sbjct: 544  SPHSVLSYLPIHQDGSCNGLQHYAALGRDSLEAAAVNLVAGEKPADVYSEIAVRVHNIMK 603

Query: 1892 RDSEKDPATDPSALLAKLLIGQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGLITD 2071
            RDS+KDPAT+P+A LAKLLI QVDRKLVKQTVMTSVYGVT+VGAREQIKRRLEEKG ITD
Sbjct: 604  RDSDKDPATNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITD 663

Query: 2072 DRLLFSAACYAAKVTLAALGELFQAARAIMGWLGDCAKIIASENQPVRWTTPLGLPVVQP 2251
            DR+LF+AACY AKVTLAALGELFQAAR IMGWLGDCAK+IASENQPV+WTTPLGLPVVQP
Sbjct: 664  DRVLFAAACYTAKVTLAALGELFQAARNIMGWLGDCAKVIASENQPVQWTTPLGLPVVQP 723

Query: 2252 YFKTQRHVIRTSLQVLALQREGDS-VEVRKQRTAFPPNFVHSLDGSHMMMTAIACRDGGL 2428
            Y+K++RH+IRTSLQVLALQREGDS VEVRKQRTAFPPNFVHSLDGSHMMMTA+ACRD GL
Sbjct: 724  YYKSERHLIRTSLQVLALQREGDSVVEVRKQRTAFPPNFVHSLDGSHMMMTAVACRDAGL 783

Query: 2429 RFAGVHDSFWTHACDVDRMNQILRQKFVDLYNMPILESLLESFETSYPTLTFPPLPNRGD 2608
             FAGVHDSFWTHACDV++MNQILR+KFV+LY+MP+LE+L ES +TSYP+L FPPLP RG+
Sbjct: 784  HFAGVHDSFWTHACDVEKMNQILREKFVELYSMPVLENLFESVQTSYPSLVFPPLPERGN 843

Query: 2609 FDLNKVVQ 2632
            FDL +V++
Sbjct: 844  FDLREVLK 851


>emb|CAC80139.1| DNA-dependent RNA polymerase [Spinacia oleracea]
          Length = 989

 Score = 1281 bits (3315), Expect = 0.0
 Identities = 614/876 (70%), Positives = 740/876 (84%), Gaps = 1/876 (0%)
 Frame = +2

Query: 8    ESGDRVFIQDPPWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYYVLRRRQIKAETEAWX 187
            +   R+F+QDPPW+++LFMK L+    + +G+++EFKE+ER KY +LRRRQIKAETEAW 
Sbjct: 114  KGSSRIFMQDPPWVNTLFMKGLV---DSNTGLRLEFKEIEREKYNLLRRRQIKAETEAWE 170

Query: 188  XXXXXXXXXXXXXXXXKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYV 367
                            KLAPNLP VK L LGWFEPL++AIEKEQ  QRS+K KA +  ++
Sbjct: 171  SMVEEYREFVREMRDKKLAPNLPQVKALFLGWFEPLKKAIEKEQKSQRSRKQKAIYGYHI 230

Query: 368  DALPADKMAVIVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKKHQ 547
            D LPADKMAVIVMHK+M LLM+G  +  CVR+V+AA+QIG AIE E++IHSFLE+TK  +
Sbjct: 231  DMLPADKMAVIVMHKMMSLLMVGN-DAGCVRLVQAALQIGTAIEQEIKIHSFLEKTKNIR 289

Query: 548  RMEVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCCLI 727
            +    ++  ED +KE  I R RVKSLIKR R+ E  KLV SE+ KSW +DTQAKLG  LI
Sbjct: 290  KN--ASDLPEDLLKEKEIQRNRVKSLIKRKRLFEAAKLVTSEDSKSWSQDTQAKLGSRLI 347

Query: 728  QLLTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAGLD 907
            +LL  +AY+Q P +QSAD+PPDVRPAFRH FKI   E GQ +VK+YGVIECDPLVL G+D
Sbjct: 348  ELLIDTAYIQHPTSQSADTPPDVRPAFRHKFKILNNELGQQVVKRYGVIECDPLVLKGID 407

Query: 908  KTVKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQKVY 1087
            ++ ++MIIPYVPML+PPK W+GYDKGGYLFLPSY+MRTHGSR+QQDA++  P +QMQKV+
Sbjct: 408  RSARYMIIPYVPMLIPPKNWKGYDKGGYLFLPSYVMRTHGSRKQQDAMRKTPPQQMQKVF 467

Query: 1088 EALDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPEL-LSDDXXXXXXXXXX 1264
            EAL+TLG+TKWR+N+++L VVE++WA+GGN+ GLVN +DVP+PE  L++D          
Sbjct: 468  EALNTLGHTKWRINRKVLGVVENLWASGGNIGGLVNCDDVPLPEKPLTEDPAEIDTWKWS 527

Query: 1265 XXXXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDL 1444
                  IN+ERH+ RCD ELK+SVA+KMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDL
Sbjct: 528  VRKAKKINRERHALRCDVELKISVAQKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDL 587

Query: 1445 CRGILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNSL 1624
            CRG+LEFA GRPLGK+GL WLKIHLAN+Y GGV+KLSY+ R +FVEN++ E+FDSA N +
Sbjct: 588  CRGVLEFASGRPLGKTGLHWLKIHLANVYAGGVDKLSYEARAAFVENHLEEVFDSATNPI 647

Query: 1625 NGNRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDSF 1804
            NGNRWWL AEDPFQCLAACI+L+ AL SSSPH+ +S+LPIHQDGSCNGLQHYAALGRDS 
Sbjct: 648  NGNRWWLSAEDPFQCLAACIDLTGALNSSSPHSFISYLPIHQDGSCNGLQHYAALGRDSK 707

Query: 1805 EAAAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQT 1984
            EAAAVNL+AG++PADVYSEIA RV  IM++DS KDP TDP A+LAK+L+ QVDRKLVKQT
Sbjct: 708  EAAAVNLVAGEEPADVYSEIAVRVREIMEKDSRKDPKTDPHAVLAKVLVDQVDRKLVKQT 767

Query: 1985 VMTSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIMG 2164
            VMTSVYGVT+VGAREQIKRRLEEKG+ITDDRLLFSAACY+AKVT++ALG+LFQAAR IM 
Sbjct: 768  VMTSVYGVTFVGAREQIKRRLEEKGVITDDRLLFSAACYSAKVTMSALGQLFQAARGIMD 827

Query: 2165 WLGDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQR 2344
            WLGDCAK+IASENQPVRWTTPLGLPVVQPY K++RH+I+TSLQVLALQ+EG+ +EV+KQR
Sbjct: 828  WLGDCAKVIASENQPVRWTTPLGLPVVQPYCKSKRHLIKTSLQVLALQQEGEGIEVKKQR 887

Query: 2345 TAFPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLYN 2524
            TAFPPN+VHSLDG+HMMMTA+ACRD GL+FAGVHDSFWTHACDV++MNQILR KFV+LYN
Sbjct: 888  TAFPPNYVHSLDGTHMMMTAVACRDAGLQFAGVHDSFWTHACDVEKMNQILRVKFVELYN 947

Query: 2525 MPILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2632
            MPILE+LLESF+T+YP  TFPPLP RGDFDL +V++
Sbjct: 948  MPILENLLESFQTAYPASTFPPLPERGDFDLEEVLE 983


>ref|XP_006404912.1| hypothetical protein EUTSA_v10000030mg [Eutrema salsugineum]
            gi|557106040|gb|ESQ46365.1| hypothetical protein
            EUTSA_v10000030mg [Eutrema salsugineum]
          Length = 993

 Score = 1259 bits (3259), Expect = 0.0
 Identities = 610/874 (69%), Positives = 733/874 (83%), Gaps = 3/874 (0%)
 Frame = +2

Query: 20   RVFIQDPPWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYYVLRRRQIKAETEAWXXXXX 199
            R+F+QDPPWIS+LF+K L         VKIE K++++RK+  LRRRQ+K ETEAW     
Sbjct: 122  RLFMQDPPWISALFLKGL--SKMVDQTVKIERKDIDKRKFDSLRRRQVKEETEAWEKMVD 179

Query: 200  XXXXXXXXXXXXKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQR--SKKNKAAFAPYVDA 373
                         LAPNLP+VK + LGWF+PL++ IE+EQ +Q+  SKK +AA+AP+++ 
Sbjct: 180  EYRDLEKEMCEKNLAPNLPYVKHMFLGWFQPLKDVIEREQKLQKNKSKKVRAAYAPHIEL 239

Query: 374  LPADKMAVIVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKKHQRM 553
            LPADKMAVIVMHK+MGL+M  G ED C++VV+AAV IG+AIE EVRIH+FL+RT+K+   
Sbjct: 240  LPADKMAVIVMHKMMGLVM-SGHEDGCIQVVQAAVSIGIAIEQEVRIHNFLKRTRKNN-- 296

Query: 554  EVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCCLIQL 733
               A   E+ +K+  +LRKRV SLI+R R+I+  K+V+SE  K WGR TQAKLG  L++L
Sbjct: 297  ---AGDSEEELKDKQLLRKRVNSLIRRKRIIDALKVVKSEGIKPWGRATQAKLGSRLLEL 353

Query: 734  LTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAGLDKT 913
            L ++AYVQPP+ Q+ D+ P+ RPAFRH FK  T+  G  LV++YGVIECD L+LAGLDK+
Sbjct: 354  LIETAYVQPPLTQAGDTIPEFRPAFRHKFKTVTKYPGSKLVRRYGVIECDSLLLAGLDKS 413

Query: 914  VKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQKVYEA 1093
             KHM+IPYVPMLVPPK+W+GYDKGGYLFLPSY+MRTHGS++QQDA++ + +K   +V+EA
Sbjct: 414  AKHMLIPYVPMLVPPKRWKGYDKGGYLFLPSYIMRTHGSKKQQDALRDISSKTAHRVFEA 473

Query: 1094 LDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPEL-LSDDXXXXXXXXXXXX 1270
            LDTLGNTKWRVN++IL VVE +WA GGN+AGLVNREDVPIPE   S+D            
Sbjct: 474  LDTLGNTKWRVNRKILDVVERLWADGGNIAGLVNREDVPIPEKPSSEDPEEIQSWKWSVR 533

Query: 1271 XXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCR 1450
                IN+ERHS RCD ELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCR
Sbjct: 534  KANKINRERHSLRCDVELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCR 593

Query: 1451 GILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNSLNG 1630
            G LEFAEGRPLGKSGL WLKIHLANLY GGVEKLS+DGR++FVEN++  I DSA+N ++G
Sbjct: 594  GTLEFAEGRPLGKSGLYWLKIHLANLYAGGVEKLSHDGRLAFVENHLDNIMDSAENPIHG 653

Query: 1631 NRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDSFEA 1810
             RWWLKAEDPFQCLAAC+ L++AL+S SP++V+SHLPIHQDGSCNGLQHYAALGRDSFEA
Sbjct: 654  QRWWLKAEDPFQCLAACVILTQALKSPSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEA 713

Query: 1811 AAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQTVM 1990
            AAVNL+AG+KPADVYSEI+ RVH IMK+DS KDP ++P+A LAK+LI QVDRKLVKQTVM
Sbjct: 714  AAVNLVAGEKPADVYSEISLRVHEIMKKDSSKDPESNPTAALAKILINQVDRKLVKQTVM 773

Query: 1991 TSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIMGWL 2170
            TSVYGVTYVGAREQIKRRLEEKG+I+D+R+LFSAACYAAKVTLAALGE+F+AARAIM WL
Sbjct: 774  TSVYGVTYVGAREQIKRRLEEKGVISDERMLFSAACYAAKVTLAALGEIFEAARAIMSWL 833

Query: 2171 GDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQRTA 2350
            GDCAKIIAS+N PVRW TPLGLPVVQPY +++RH+IRTSLQVLALQREG++V+VRKQRTA
Sbjct: 834  GDCAKIIASDNHPVRWITPLGLPVVQPYCRSERHLIRTSLQVLALQREGNTVDVRKQRTA 893

Query: 2351 FPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLYNMP 2530
            FPPNFVHSLDG+HMMMTA+ACR+ GL FAGVHDS+WTHACDVD MN+ILR+KFV+LYN P
Sbjct: 894  FPPNFVHSLDGTHMMMTAVACREAGLNFAGVHDSYWTHACDVDTMNRILREKFVELYNTP 953

Query: 2531 ILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2632
            ILE LL+SF+ SYP L FPP+P RGDFDL +V++
Sbjct: 954  ILEDLLQSFQESYPNLVFPPVPKRGDFDLKEVLK 987


>ref|XP_006296121.1| hypothetical protein CARUB_v10025273mg [Capsella rubella]
            gi|482564829|gb|EOA29019.1| hypothetical protein
            CARUB_v10025273mg [Capsella rubella]
          Length = 991

 Score = 1258 bits (3256), Expect = 0.0
 Identities = 611/874 (69%), Positives = 733/874 (83%), Gaps = 3/874 (0%)
 Frame = +2

Query: 20   RVFIQDPPWISSLFMKSLLFRGRNRSGVKIEFKEMERRKYYVLRRRQIKAETEAWXXXXX 199
            R+F+QDPPWIS+LF+K L         VKIE K +++RK+  LRRRQ+K ETEAW     
Sbjct: 120  RLFMQDPPWISALFLKGL--SKMVDQTVKIEHKYIDKRKFDSLRRRQVKEETEAWEKMVD 177

Query: 200  XXXXXXXXXXXXKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQR--SKKNKAAFAPYVDA 373
                         LAPNLP+VK + LGWF+PL++ IE+EQ +Q+  SKK +AA+AP+++ 
Sbjct: 178  EYRDLEKEMCEKNLAPNLPYVKHMFLGWFQPLKDVIEREQKLQKNKSKKVRAAYAPHIEL 237

Query: 374  LPADKMAVIVMHKIMGLLMMGGKEDRCVRVVEAAVQIGVAIEHEVRIHSFLERTKKHQRM 553
            LPADKMAVIVMHK+MGL+M  G ED C++VV+AAV IG+AIE EVRIH+FL+RT+K+   
Sbjct: 238  LPADKMAVIVMHKMMGLVM-SGHEDGCIQVVQAAVSIGIAIEQEVRIHNFLKRTRKNN-- 294

Query: 554  EVGAESQEDSIKEAAILRKRVKSLIKRNRVIEVQKLVRSEEFKSWGRDTQAKLGCCLIQL 733
                +SQE+ +KE  +LRKRV SLI+R R+I+  K+V+SE  K WGR TQAKLG  L++L
Sbjct: 295  --AGDSQEE-LKEKQLLRKRVNSLIRRKRIIDALKVVKSEGIKPWGRATQAKLGSRLLEL 351

Query: 734  LTQSAYVQPPVNQSADSPPDVRPAFRHIFKIATRESGQSLVKKYGVIECDPLVLAGLDKT 913
            L ++AYVQPP+ QS DS P+ RPAFRH FK  T+  G  LV++YGVIECD L+LAGLDK+
Sbjct: 352  LIETAYVQPPLTQSGDSIPEFRPAFRHKFKTVTKYPGSKLVRRYGVIECDSLLLAGLDKS 411

Query: 914  VKHMIIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRQQQDAVKAVPTKQMQKVYEA 1093
             KHMIIPYVPMLVPPK+W+GYDKGGYLFLPSY+MRTHGS++QQDA++ + +K   +V+EA
Sbjct: 412  AKHMIIPYVPMLVPPKRWKGYDKGGYLFLPSYIMRTHGSKKQQDALRDISSKTAHRVFEA 471

Query: 1094 LDTLGNTKWRVNKRILSVVESIWAAGGNLAGLVNREDVPIPEL-LSDDXXXXXXXXXXXX 1270
            LDTLGNTKWRVN++IL VVE +WA GGN+AGLVNREDVPIPE   S+D            
Sbjct: 472  LDTLGNTKWRVNRKILDVVERLWADGGNIAGLVNREDVPIPEKPSSEDPEELQSWKWSVR 531

Query: 1271 XXXXINQERHSQRCDTELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCR 1450
                IN+ERHS RCD ELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCR
Sbjct: 532  KANKINRERHSLRCDVELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCR 591

Query: 1451 GILEFAEGRPLGKSGLRWLKIHLANLYGGGVEKLSYDGRISFVENYIAEIFDSADNSLNG 1630
            G LEFAEGRPLGKSGL WLKIHLANLY GGVEKLS+D R++FVE ++ ++ DSA+N ++G
Sbjct: 592  GTLEFAEGRPLGKSGLHWLKIHLANLYAGGVEKLSHDARLAFVETHLDDVMDSAENPIHG 651

Query: 1631 NRWWLKAEDPFQCLAACINLSEALRSSSPHTVVSHLPIHQDGSCNGLQHYAALGRDSFEA 1810
             RWWLKAEDPFQCLAAC+ L++AL+S SP++V+SHLPIHQDGSCNGLQHYAALGRDSFEA
Sbjct: 652  KRWWLKAEDPFQCLAACVILTQALKSPSPYSVISHLPIHQDGSCNGLQHYAALGRDSFEA 711

Query: 1811 AAVNLIAGDKPADVYSEIAERVHNIMKRDSEKDPATDPSALLAKLLIGQVDRKLVKQTVM 1990
            AAVNL+AG+KPADVYSEI+ RVH IMK+DS KDP ++P+A LAK+LI QVDRKLVKQTVM
Sbjct: 712  AAVNLVAGEKPADVYSEISRRVHEIMKKDSSKDPESNPTAALAKILITQVDRKLVKQTVM 771

Query: 1991 TSVYGVTYVGAREQIKRRLEEKGLITDDRLLFSAACYAAKVTLAALGELFQAARAIMGWL 2170
            TSVYGVTYVGAREQIKRRLEEKG+ITD+R+LF+AACY+AKVTLAALGE+F+AARAIM WL
Sbjct: 772  TSVYGVTYVGAREQIKRRLEEKGVITDERMLFAAACYSAKVTLAALGEIFEAARAIMSWL 831

Query: 2171 GDCAKIIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDSVEVRKQRTA 2350
            GDCAKIIAS+N PVRW TPLGLPVVQPY +++RH+IRTSLQVLALQREG++V+VRKQRTA
Sbjct: 832  GDCAKIIASDNHPVRWITPLGLPVVQPYCRSERHLIRTSLQVLALQREGNTVDVRKQRTA 891

Query: 2351 FPPNFVHSLDGSHMMMTAIACRDGGLRFAGVHDSFWTHACDVDRMNQILRQKFVDLYNMP 2530
            FPPNFVHSLDG+HMMMTA+ACR+ GL FAGVHDS+WTHACDVD MN+ILR+KFV+LYN P
Sbjct: 892  FPPNFVHSLDGTHMMMTAVACREAGLNFAGVHDSYWTHACDVDTMNRILREKFVELYNTP 951

Query: 2531 ILESLLESFETSYPTLTFPPLPNRGDFDLNKVVQ 2632
            ILE LL+SF+ SYP L FPP+P RGDFDL +V++
Sbjct: 952  ILEDLLQSFQESYPNLVFPPVPKRGDFDLKEVLK 985