BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00000186
         (1665 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006361415.1| PREDICTED: pentatricopeptide repeat-containi...   694   0.0  
ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containi...   691   0.0  
emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]   689   0.0  
gb|EOY10909.1| Pentatricopeptide repeat (PPR-like) superfamily p...   687   0.0  
ref|XP_004236781.1| PREDICTED: pentatricopeptide repeat-containi...   682   0.0  
ref|XP_004304772.1| PREDICTED: pentatricopeptide repeat-containi...   679   0.0  
gb|EXB93167.1| hypothetical protein L484_024505 [Morus notabilis]     657   0.0  
ref|XP_002521980.1| pentatricopeptide repeat-containing protein,...   657   0.0  
ref|XP_006296608.1| hypothetical protein CARUB_v10013258mg [Caps...   656   0.0  
ref|XP_006371094.1| hypothetical protein POPTR_0019s03630g [Popu...   656   0.0  
ref|NP_566237.1| pentatricopeptide repeat-containing protein [Ar...   656   0.0  
ref|XP_002884468.1| pentatricopeptide repeat-containing protein ...   655   0.0  
dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]           652   0.0  
ref|XP_006487702.1| PREDICTED: pentatricopeptide repeat-containi...   646   0.0  
ref|XP_006442665.1| hypothetical protein CICLE_v10019446mg [Citr...   642   0.0  
gb|EMJ06317.1| hypothetical protein PRUPE_ppa004835mg [Prunus pe...   636   e-180
ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containi...   621   e-175
gb|EPS74045.1| hypothetical protein M569_00706, partial [Genlise...   604   e-170
ref|XP_003590960.1| Pentatricopeptide repeat-containing protein ...   603   e-170
gb|ESW16008.1| hypothetical protein PHAVU_007G121900g [Phaseolus...   595   e-167

>ref|XP_006361415.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
            chloroplastic-like [Solanum tuberosum]
          Length = 583

 Score =  694 bits (1792), Expect = 0.0
 Identities = 345/499 (69%), Positives = 409/499 (81%), Gaps = 2/499 (0%)
 Frame = +1

Query: 175  FLKVSFFTQHNKLSTRKSHKNSVFRCSNQIEPNFRNYYRNPERVRVSTDTKPTHLPTYNG 354
            F +  FF+ + K  ++ S  N V RCS+      +   RNP RV++S++           
Sbjct: 10   FPQCPFFSNNLKPKSQSSKHNFVVRCSSSSNDQSKVKTRNPLRVKISSEN---------- 59

Query: 355  FKEAHFVKLLHRSCKAGNYDEGLYFLECMVNLGHRADVILCTKLIKGFFNSKCVDKAVKV 534
            ++  H +K+L+ SCK G YDE LY LEC +  G++ DVILCTKLIKGF NSK  DK VKV
Sbjct: 60   YRPTHDMKVLNWSCKVGKYDETLYLLECKLKSGYKPDVILCTKLIKGFCNSKNSDKGVKV 119

Query: 535  MRILERYGEPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNR 714
            M+ILE++GEPD+FAYNA ISG CKMN+I+ AN+VL+ M+ARGF PD VTYNI+IGSLC+R
Sbjct: 120  MQILEQFGEPDVFAYNALISGFCKMNKIEEANKVLNRMKARGFPPDSVTYNILIGSLCDR 179

Query: 715  GKLDLAKKMLDQLIEDN-CQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYT 891
            GKL  A K+LDQL E+N C+PTVITYTILIEATILEGG +EAMKL DEML RGLQPDMYT
Sbjct: 180  GKLGSALKLLDQLKEENNCKPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPDMYT 239

Query: 892  YNTIIRGMCREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLN-QGKWDDGEKLMIEM 1068
            YN IIRGMCRE +MD+A+EFVRSL S+GCKPDVISYNILLRALL+ +GKW DGEKLM EM
Sbjct: 240  YNAIIRGMCREKMMDQAYEFVRSLPSKGCKPDVISYNILLRALLHHKGKWSDGEKLMNEM 299

Query: 1069 FSTECEPNVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRL 1248
             S  CEPNVVTYSIL+SALCRDG+LDEAINLLK+M+D+GLTPDT+TYDPLISA CK GRL
Sbjct: 300  LSAGCEPNVVTYSILMSALCRDGKLDEAINLLKIMMDKGLTPDTFTYDPLISAFCKGGRL 359

Query: 1249 DLAISFLDYMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTM 1428
            DLAI FLDYMIS+GC PDIVNYNTILS +CK G ADEA+EVF KLAE GCPPDVSTYNT+
Sbjct: 360  DLAIKFLDYMISNGCLPDIVNYNTILSTMCKKGKADEAMEVFEKLAEIGCPPDVSTYNTL 419

Query: 1429 VSALWNHGDRSRALMLISEMIMKGISPDEITYNSLISCLCRDGMVDRAIELLGDMKNSEF 1608
            +SALWN+G R+RAL ++SEMI KG+ PDEITYN+LISCLCRDGMV+ A++LLGDM+ + F
Sbjct: 420  MSALWNNGGRARALKMVSEMIEKGVDPDEITYNALISCLCRDGMVNEALDLLGDMEGNGF 479

Query: 1609 LPTVVTYNIVLLGLCKARR 1665
             PTV+TYNI+LLGLCKA R
Sbjct: 480  PPTVITYNILLLGLCKAHR 498



 Score =  231 bits (588), Expect = 9e-58
 Identities = 120/376 (31%), Positives = 218/376 (57%), Gaps = 3/376 (0%)
 Frame = +1

Query: 379  LLHRSCKAGNYDEGLYFLECMVNLGH-RADVILCTKLIKGFFNSKCVDKAVKVM-RILER 552
            L+   C  G     L  L+ +    + +  VI  T LI+       + +A+K++  +L R
Sbjct: 172  LIGSLCDRGKLGSALKLLDQLKEENNCKPTVITYTILIEATILEGGIHEAMKLLDEMLSR 231

Query: 553  YGEPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCN-RGKLDL 729
              +PD++ YNA I G+C+   +D A + + S+ ++G  PDV++YNI++ +L + +GK   
Sbjct: 232  GLQPDMYTYNAIIRGMCREKMMDQAYEFVRSLPSKGCKPDVISYNILLRALLHHKGKWSD 291

Query: 730  AKKMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIR 909
             +K++++++   C+P V+TY+IL+ A   +G  +EA+ L   M+ +GL PD +TY+ +I 
Sbjct: 292  GEKLMNEMLSAGCEPNVVTYSILMSALCRDGKLDEAINLLKIMMDKGLTPDTFTYDPLIS 351

Query: 910  GMCREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEP 1089
              C+ G +D A +F+  + S GC PD+++YN +L  +  +GK D+  ++  ++    C P
Sbjct: 352  AFCKGGRLDLAIKFLDYMISNGCLPDIVNYNTILSTMCKKGKADEAMEVFEKLAEIGCPP 411

Query: 1090 NVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFL 1269
            +V TY+ L+SAL  +G    A+ ++  M+++G+ PD  TY+ LIS LC++G ++ A+  L
Sbjct: 412  DVSTYNTLMSALWNNGGRARALKMVSEMIEKGVDPDEITYNALISCLCRDGMVNEALDLL 471

Query: 1270 DYMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNH 1449
              M  +G  P ++ YN +L  LCK     EA+EV  ++ E G  P+ +TY  ++  +   
Sbjct: 472  GDMEGNGFPPTVITYNILLLGLCKAHRVVEAIEVLAEMVEKGRRPNETTYILLIEGIGFS 531

Query: 1450 GDRSRALMLISEMIMK 1497
            G R +A+ + S +  K
Sbjct: 532  GRRVQAMEMASAIYHK 547


>ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
            chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  691 bits (1783), Expect = 0.0
 Identities = 337/483 (69%), Positives = 401/483 (83%)
 Frame = +1

Query: 217  TRKSHKNSVFRCSNQIEPNFRNYYRNPERVRVSTDTKPTHLPTYNGFKEAHFVKLLHRSC 396
            T  SH  S+  C N   PN     RN  +V VS + +P HL +Y+ F+E H +KLL+RSC
Sbjct: 22   TSHSHHTSIVTCRNP-NPNDGFNSRNAPKVGVSAEARPAHLQSYD-FRETHLMKLLNRSC 79

Query: 397  KAGNYDEGLYFLECMVNLGHRADVILCTKLIKGFFNSKCVDKAVKVMRILERYGEPDIFA 576
            KAG ++E LYFLEC+VN G+  DVILCTKLIKGFFN K ++KA +VM ILE + EPD+FA
Sbjct: 80   KAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHTEPDVFA 139

Query: 577  YNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKKMLDQLI 756
            YNA ISG CK+N+I++A QVL+ M+ARGF PD+VTYNIMIGSLCNR KL LA K+LDQL+
Sbjct: 140  YNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLL 199

Query: 757  EDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMCREGLMD 936
             DNC PTVITYTILIEATI+EGG NEAMKL +EML RGL PDMYTYN IIRGMC+EG+++
Sbjct: 200  LDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVE 259

Query: 937  EAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVVTYSILI 1116
             A E + SLTS+GCKPDVISYNILLRA LNQGKWD+GEKL+ EMFS  CEPN VTYSILI
Sbjct: 260  RAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILI 319

Query: 1117 SALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYMISSGCF 1296
            S+LCR G++DEAI++LKVM+++ LTPDTY+YDPLISALCKEGRLDLAI  +DYMIS+GC 
Sbjct: 320  SSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCL 379

Query: 1297 PDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGDRSRALML 1476
            PDIVNYNTIL+ALCKNGNA++ALE+F KL   GCPP+VS+YNTM+SALW+ GDRSRAL +
Sbjct: 380  PDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGM 439

Query: 1477 ISEMIMKGISPDEITYNSLISCLCRDGMVDRAIELLGDMKNSEFLPTVVTYNIVLLGLCK 1656
            +  MI KG+ PDEITYNSLISCLCRDG+V+ AI LL DM+ S F PTV++YNIVLLGLCK
Sbjct: 440  VPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCK 499

Query: 1657 ARR 1665
             RR
Sbjct: 500  VRR 502



 Score =  235 bits (599), Expect = 5e-59
 Identities = 115/347 (33%), Positives = 206/347 (59%), Gaps = 1/347 (0%)
 Frame = +1

Query: 466  VILCTKLIKGFFNSKCVDKAVKVMR-ILERYGEPDIFAYNAFISGLCKMNQIDSANQVLS 642
            VI  T LI+       +++A+K++  +L R   PD++ YNA I G+CK   ++ A ++++
Sbjct: 207  VITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELIT 266

Query: 643  SMRARGFSPDVVTYNIMIGSLCNRGKLDLAKKMLDQLIEDNCQPTVITYTILIEATILEG 822
            S+ ++G  PDV++YNI++ +  N+GK D  +K++ ++    C+P  +TY+ILI +    G
Sbjct: 267  SLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFG 326

Query: 823  GTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMCREGLMDEAFEFVRSLTSRGCKPDVISYN 1002
              +EA+ +   M+ + L PD Y+Y+ +I  +C+EG +D A   +  + S GC PD+++YN
Sbjct: 327  RIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYN 386

Query: 1003 ILLRALLNQGKWDDGEKLMIEMFSTECEPNVVTYSILISALCRDGQLDEAINLLKVMLDE 1182
             +L AL   G  +   ++  ++    C PNV +Y+ +ISAL   G    A+ ++  M+ +
Sbjct: 387  TILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISK 446

Query: 1183 GLTPDTYTYDPLISALCKEGRLDLAISFLDYMISSGCFPDIVNYNTILSALCKNGNADEA 1362
            G+ PD  TY+ LIS LC++G ++ AI  LD M  SG  P +++YN +L  LCK    D+A
Sbjct: 447  GVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDA 506

Query: 1363 LEVFGKLAENGCPPDVSTYNTMVSALWNHGDRSRALMLISEMIMKGI 1503
            + +F ++ E GC P+ +TY  ++  +   G R+ A+ L + +  + +
Sbjct: 507  IGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDV 553


>emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  689 bits (1779), Expect = 0.0
 Identities = 337/483 (69%), Positives = 400/483 (82%)
 Frame = +1

Query: 217  TRKSHKNSVFRCSNQIEPNFRNYYRNPERVRVSTDTKPTHLPTYNGFKEAHFVKLLHRSC 396
            T  SH  S+  C N   PN     RN  +V VS + +P HL +Y+ F+E H +KLL+RSC
Sbjct: 32   TSHSHHTSIVTCRNP-NPNDGYNSRNSPKVGVSAEARPAHLQSYD-FRETHLMKLLNRSC 89

Query: 397  KAGNYDEGLYFLECMVNLGHRADVILCTKLIKGFFNSKCVDKAVKVMRILERYGEPDIFA 576
            KAG ++E LYFLEC+VN G+  DVILCTKLIKGFFN K ++KA +VM ILE + EPD+FA
Sbjct: 90   KAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHTEPDVFA 149

Query: 577  YNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKKMLDQLI 756
            YNA ISG CK+NQI++A QVL+ M+ARGF PD+VTYNIMIGSLCNR KL LA  +LDQL+
Sbjct: 150  YNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLL 209

Query: 757  EDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMCREGLMD 936
             DNC PTVITYTILIEATI+EGG NEAMKL +EML RGL PDMYTYN IIRGMC+EG+++
Sbjct: 210  LDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVE 269

Query: 937  EAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVVTYSILI 1116
             A E + SLTS+GC+PDVISYNILLRA LNQGKWD+GEKL+ EMFS  CEPN VTYSILI
Sbjct: 270  RAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILI 329

Query: 1117 SALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYMISSGCF 1296
            S+LCR G++DEAI++LKVM+++ LTPDTY+YDPLISALCKEGRLDLAI  +DYMIS+GC 
Sbjct: 330  SSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCL 389

Query: 1297 PDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGDRSRALML 1476
            PDIVNYNTIL+ALCKNGNA++ALE+F KL   GCPP+VS+YNTM+SALW+ GDRSRAL +
Sbjct: 390  PDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGM 449

Query: 1477 ISEMIMKGISPDEITYNSLISCLCRDGMVDRAIELLGDMKNSEFLPTVVTYNIVLLGLCK 1656
            +  MI KGI PDEITYNSLISCLCRDG+V+ AI LL DM+ S F PTV++YNIVLLGLCK
Sbjct: 450  VPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCK 509

Query: 1657 ARR 1665
             RR
Sbjct: 510  VRR 512



 Score =  235 bits (600), Expect = 4e-59
 Identities = 115/347 (33%), Positives = 206/347 (59%), Gaps = 1/347 (0%)
 Frame = +1

Query: 466  VILCTKLIKGFFNSKCVDKAVKVMR-ILERYGEPDIFAYNAFISGLCKMNQIDSANQVLS 642
            VI  T LI+       +++A+K++  +L R   PD++ YNA I G+CK   ++ A ++++
Sbjct: 217  VITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELIT 276

Query: 643  SMRARGFSPDVVTYNIMIGSLCNRGKLDLAKKMLDQLIEDNCQPTVITYTILIEATILEG 822
            S+ ++G  PDV++YNI++ +  N+GK D  +K++ ++    C+P  +TY+ILI +    G
Sbjct: 277  SLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFG 336

Query: 823  GTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMCREGLMDEAFEFVRSLTSRGCKPDVISYN 1002
              +EA+ +   M+ + L PD Y+Y+ +I  +C+EG +D A   +  + S GC PD+++YN
Sbjct: 337  RIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYN 396

Query: 1003 ILLRALLNQGKWDDGEKLMIEMFSTECEPNVVTYSILISALCRDGQLDEAINLLKVMLDE 1182
             +L AL   G  +   ++  ++    C PNV +Y+ +ISAL   G    A+ ++  M+ +
Sbjct: 397  TILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISK 456

Query: 1183 GLTPDTYTYDPLISALCKEGRLDLAISFLDYMISSGCFPDIVNYNTILSALCKNGNADEA 1362
            G+ PD  TY+ LIS LC++G ++ AI  LD M  SG  P +++YN +L  LCK    D+A
Sbjct: 457  GIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDA 516

Query: 1363 LEVFGKLAENGCPPDVSTYNTMVSALWNHGDRSRALMLISEMIMKGI 1503
            + +F ++ E GC P+ +TY  ++  +   G R+ A+ L + +  + +
Sbjct: 517  IGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDV 563


>gb|EOY10909.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
            cacao]
          Length = 586

 Score =  687 bits (1774), Expect = 0.0
 Identities = 333/493 (67%), Positives = 406/493 (82%), Gaps = 1/493 (0%)
 Frame = +1

Query: 190  FFTQHNK-LSTRKSHKNSVFRCSNQIEPNFRNYYRNPERVRVSTDTKPTHLPTYNGFKEA 366
            F TQ  K  S   SH  S+  C N    +  +  RN ++VRVS +T+PTHL +++ FKE 
Sbjct: 15   FTTQQLKPTSNSHSHHTSLVSCLNHESQDSSSKSRNNQKVRVSAETRPTHLLSFD-FKET 73

Query: 367  HFVKLLHRSCKAGNYDEGLYFLECMVNLGHRADVILCTKLIKGFFNSKCVDKAVKVMRIL 546
            H +KLL+RSCKAG Y+E  YFLECMV  G++ DV+LCTK+IKGFFN + V+KA +V+ IL
Sbjct: 74   HLMKLLNRSCKAGKYNEAFYFLECMVGKGYKPDVVLCTKMIKGFFNGRNVEKATRVIEIL 133

Query: 547  ERYGEPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLD 726
            E+YGEPD+FAYNA ISG CKMN++D AN+VL  MR+RGFSPDVVTYNIMIGS C+RGKLD
Sbjct: 134  EKYGEPDVFAYNAIISGFCKMNRLDFANKVLDRMRSRGFSPDVVTYNIMIGSFCSRGKLD 193

Query: 727  LAKKMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTII 906
             A K+++QL++DNC+P+VITYTILIEAT+L+G  NEAMKL DEML +GL+PDM+TYN II
Sbjct: 194  SAYKVINQLLKDNCKPSVITYTILIEATMLQGEINEAMKLLDEMLSKGLRPDMFTYNAII 253

Query: 907  RGMCREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECE 1086
            RGMC++G+++ AF+FVRSL +RGC+PDVISYNILLR LLNQGKW +GEKL+ EM S  CE
Sbjct: 254  RGMCKDGMVNRAFKFVRSLKARGCQPDVISYNILLRVLLNQGKWAEGEKLVTEMVSRGCE 313

Query: 1087 PNVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISF 1266
            PNVVTYSILIS+LCR+G+L+EA+N+LK+M + GLTPD Y+YDPLISA CKEGRLDLAI F
Sbjct: 314  PNVVTYSILISSLCREGKLEEAVNVLKMMKERGLTPDAYSYDPLISAFCKEGRLDLAIEF 373

Query: 1267 LDYMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWN 1446
            LD MIS GC PDIVNYNT+L+ LCKNG A++ALE+F KL E GCPP+VS+YNTM SALW+
Sbjct: 374  LDCMISDGCLPDIVNYNTVLATLCKNGKAEQALEIFEKLREVGCPPNVSSYNTMFSALWS 433

Query: 1447 HGDRSRALMLISEMIMKGISPDEITYNSLISCLCRDGMVDRAIELLGDMKNSEFLPTVVT 1626
             GD+ +AL +ISEM+ K I PDEITYNSLISCLCRDGMVD AIELL DM  S   PTV++
Sbjct: 434  SGDKVKALEMISEMLSKRIGPDEITYNSLISCLCRDGMVDEAIELLVDMGCSGIPPTVIS 493

Query: 1627 YNIVLLGLCKARR 1665
            YNIVLLGLCK  R
Sbjct: 494  YNIVLLGLCKVHR 506



 Score =  243 bits (621), Expect = 1e-61
 Identities = 128/375 (34%), Positives = 213/375 (56%), Gaps = 2/375 (0%)
 Frame = +1

Query: 394  CKAGNYDEGLYFLECMVNLGHRADVILCTKLIKGFFNSKCVDKAVKVM-RILERYGEPDI 570
            C  G  D     +  ++    +  VI  T LI+       +++A+K++  +L +   PD+
Sbjct: 187  CSRGKLDSAYKVINQLLKDNCKPSVITYTILIEATMLQGEINEAMKLLDEMLSKGLRPDM 246

Query: 571  FAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKKMLDQ 750
            F YNA I G+CK   ++ A + + S++ARG  PDV++YNI++  L N+GK    +K++ +
Sbjct: 247  FTYNAIIRGMCKDGMVNRAFKFVRSLKARGCQPDVISYNILLRVLLNQGKWAEGEKLVTE 306

Query: 751  LIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMCREGL 930
            ++   C+P V+TY+ILI +   EG   EA+ +   M  RGL PD Y+Y+ +I   C+EG 
Sbjct: 307  MVSRGCEPNVVTYSILISSLCREGKLEEAVNVLKMMKERGLTPDAYSYDPLISAFCKEGR 366

Query: 931  MDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVVTYSI 1110
            +D A EF+  + S GC PD+++YN +L  L   GK +   ++  ++    C PNV +Y+ 
Sbjct: 367  LDLAIEFLDCMISDGCLPDIVNYNTVLATLCKNGKAEQALEIFEKLREVGCPPNVSSYNT 426

Query: 1111 LISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYMISSG 1290
            + SAL   G   +A+ ++  ML + + PD  TY+ LIS LC++G +D AI  L  M  SG
Sbjct: 427  MFSALWSSGDKVKALEMISEMLSKRIGPDEITYNSLISCLCRDGMVDEAIELLVDMGCSG 486

Query: 1291 CFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGDRSRAL 1470
              P +++YN +L  LCK    ++A+EV   + +  C P+ +TY  ++  +   G RS A+
Sbjct: 487  IPPTVISYNIVLLGLCKVHRINDAIEVLAAMVDKRCQPNETTYILLIEGIGFAGWRSEAM 546

Query: 1471 MLISEMI-MKGISPD 1512
             L + +  M+ IS D
Sbjct: 547  ELANALFRMEAISKD 561


>ref|XP_004236781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
            chloroplastic-like [Solanum lycopersicum]
          Length = 575

 Score =  682 bits (1761), Expect = 0.0
 Identities = 340/494 (68%), Positives = 404/494 (81%), Gaps = 2/494 (0%)
 Frame = +1

Query: 190  FFTQHNKLSTRKSHKNSVFRCSNQIEPNFRNYYRNPERVRVSTDTKPTHLPTYNGFKEAH 369
            FF+ + K  +  S  N V RCS   E +  N  RNP+RV++S++ + +H           
Sbjct: 12   FFSNNLKPKSESSKHNFVVRCSISNEESRVNI-RNPQRVKISSENRGSH----------- 59

Query: 370  FVKLLHRSCKAGNYDEGLYFLECMVNLGHRADVILCTKLIKGFFNSKCVDKAVKVMRILE 549
             +K+L+ SCK G YDE LY LEC V  G++ DVILCTKLIKGFFNSK  DK VKVM+ILE
Sbjct: 60   DMKVLNWSCKVGKYDETLYLLECKVKSGYKPDVILCTKLIKGFFNSKNSDKGVKVMQILE 119

Query: 550  RYGEPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDL 729
            ++GEPD+FAYNA +SG CKMN+I+ AN+VL+ M+  GF PD VTYNI+IGSLC+RGKL  
Sbjct: 120  QFGEPDVFAYNALVSGFCKMNKIEEANKVLNRMKTHGFPPDSVTYNILIGSLCDRGKLGS 179

Query: 730  AKKMLDQLIED-NCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTII 906
            A  +LDQL E+ NC+PTVITYTILIEATILEGG +EAMKL DEML  GLQPDMYTYN II
Sbjct: 180  ALMLLDQLKEEHNCKPTVITYTILIEATILEGGIHEAMKLLDEMLSIGLQPDMYTYNAII 239

Query: 907  RGMCREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLN-QGKWDDGEKLMIEMFSTEC 1083
            RGMCRE +MD+A+EFVRSL S+GCKPDVISYNILLRALL+ +GKW DGEKLM EM    C
Sbjct: 240  RGMCREKMMDQAYEFVRSLPSKGCKPDVISYNILLRALLHHRGKWSDGEKLMNEMLCAGC 299

Query: 1084 EPNVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAIS 1263
            EPNVVTYSIL+SALCRDG+LDEAINLLK+M+D+GLTPDT+TYDPLISA CK GRLD+AI 
Sbjct: 300  EPNVVTYSILMSALCRDGKLDEAINLLKIMVDKGLTPDTFTYDPLISAFCKGGRLDMAIK 359

Query: 1264 FLDYMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALW 1443
            FLDYMI++GC PDIVNYNTILS +CK G ADEA+EVF KLAE GCPPDVSTYNT++SALW
Sbjct: 360  FLDYMITNGCLPDIVNYNTILSTMCKKGKADEAMEVFEKLAEIGCPPDVSTYNTLMSALW 419

Query: 1444 NHGDRSRALMLISEMIMKGISPDEITYNSLISCLCRDGMVDRAIELLGDMKNSEFLPTVV 1623
            N+G R+RAL ++SEMI KG+ PDEITYN+LISCLCRDGMV+ A++LLGDM+ + F PTV+
Sbjct: 420  NNGGRARALKMVSEMIEKGVDPDEITYNALISCLCRDGMVNEALDLLGDMEGNGFPPTVI 479

Query: 1624 TYNIVLLGLCKARR 1665
            TYNI+LLGLCKA R
Sbjct: 480  TYNILLLGLCKAHR 493



 Score =  231 bits (589), Expect = 7e-58
 Identities = 125/400 (31%), Positives = 225/400 (56%), Gaps = 3/400 (0%)
 Frame = +1

Query: 307  RVSTDTKPTHLPTYNGFKEAHFVKLLHRSCKAGNYDEGLYFLECMVNLGH-RADVILCTK 483
            R+ T   P    TYN         L+   C  G     L  L+ +    + +  VI  T 
Sbjct: 151  RMKTHGFPPDSVTYN--------ILIGSLCDRGKLGSALMLLDQLKEEHNCKPTVITYTI 202

Query: 484  LIKGFFNSKCVDKAVKVMRILERYG-EPDIFAYNAFISGLCKMNQIDSANQVLSSMRARG 660
            LI+       + +A+K++  +   G +PD++ YNA I G+C+   +D A + + S+ ++G
Sbjct: 203  LIEATILEGGIHEAMKLLDEMLSIGLQPDMYTYNAIIRGMCREKMMDQAYEFVRSLPSKG 262

Query: 661  FSPDVVTYNIMIGSLCN-RGKLDLAKKMLDQLIEDNCQPTVITYTILIEATILEGGTNEA 837
              PDV++YNI++ +L + RGK    +K++++++   C+P V+TY+IL+ A   +G  +EA
Sbjct: 263  CKPDVISYNILLRALLHHRGKWSDGEKLMNEMLCAGCEPNVVTYSILMSALCRDGKLDEA 322

Query: 838  MKLFDEMLLRGLQPDMYTYNTIIRGMCREGLMDEAFEFVRSLTSRGCKPDVISYNILLRA 1017
            + L   M+ +GL PD +TY+ +I   C+ G +D A +F+  + + GC PD+++YN +L  
Sbjct: 323  INLLKIMVDKGLTPDTFTYDPLISAFCKGGRLDMAIKFLDYMITNGCLPDIVNYNTILST 382

Query: 1018 LLNQGKWDDGEKLMIEMFSTECEPNVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPD 1197
            +  +GK D+  ++  ++    C P+V TY+ L+SAL  +G    A+ ++  M+++G+ PD
Sbjct: 383  MCKKGKADEAMEVFEKLAEIGCPPDVSTYNTLMSALWNNGGRARALKMVSEMIEKGVDPD 442

Query: 1198 TYTYDPLISALCKEGRLDLAISFLDYMISSGCFPDIVNYNTILSALCKNGNADEALEVFG 1377
              TY+ LIS LC++G ++ A+  L  M  +G  P ++ YN +L  LCK     EA+EV  
Sbjct: 443  EITYNALISCLCRDGMVNEALDLLGDMEGNGFPPTVITYNILLLGLCKAHRVVEAIEVLA 502

Query: 1378 KLAENGCPPDVSTYNTMVSALWNHGDRSRALMLISEMIMK 1497
            ++ E GC P+ +TY  ++  +   G R +A+ + + +  K
Sbjct: 503  EMVEKGCRPNETTYILLIEGIGFSGRRVQAMEMATAIYHK 542


>ref|XP_004304772.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 586

 Score =  679 bits (1753), Expect = 0.0
 Identities = 333/505 (65%), Positives = 407/505 (80%), Gaps = 1/505 (0%)
 Frame = +1

Query: 154  HLFMLSSFLKVSFFTQH-NKLSTRKSHKNSVFRCSNQIEPNFRNYYRNPERVRVSTDTKP 330
            H F  +S LK +  + H   LS R S  +S+         N RN  RNP RV VS + K 
Sbjct: 11   HSFHTTSQLKPTSHSHHPTALSCRASSASSI--------SNGRNSSRNPTRVSVSAEPKS 62

Query: 331  THLPTYNGFKEAHFVKLLHRSCKAGNYDEGLYFLECMVNLGHRADVILCTKLIKGFFNSK 510
            T L  Y+ FK+ H +K+L+RSCKAG Y+E +YFLE MVN G++ DVILCTKLIKGFFNS+
Sbjct: 63   TQLQNYD-FKDTHLMKVLNRSCKAGQYNEAIYFLELMVNKGYKPDVILCTKLIKGFFNSR 121

Query: 511  CVDKAVKVMRILERYGEPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNI 690
             ++KA++VM+ILE+YGEPD+FAYNA ISG CK N+I+SAN+VL  M+++GF PDVVTYNI
Sbjct: 122  NIEKAIRVMQILEQYGEPDLFAYNALISGFCKANRIESANKVLDRMKSQGFKPDVVTYNI 181

Query: 691  MIGSLCNRGKLDLAKKMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRG 870
            MIGSLC+RGKL LA +++D+L+ DNC+PTVITYTILIEA IL+GG NEAMKL DEML RG
Sbjct: 182  MIGSLCSRGKLGLALQVMDRLVRDNCKPTVITYTILIEAIILDGGINEAMKLLDEMLSRG 241

Query: 871  LQPDMYTYNTIIRGMCREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGE 1050
            L+PDMYTYN I+RGMCREG++D AFEFV+   ++GC P+VISYNILLRALLN+GKW++GE
Sbjct: 242  LKPDMYTYNAIVRGMCREGMLDRAFEFVKCFDAKGCAPNVISYNILLRALLNRGKWEEGE 301

Query: 1051 KLMIEMFSTECEPNVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISAL 1230
             L+  M +  CEPNVVTYSILIS LCRDG++++ +N+LK+M ++GLTPD Y+YDPLIS  
Sbjct: 302  NLVANMCARGCEPNVVTYSILISTLCRDGKVEDGMNVLKIMKEKGLTPDAYSYDPLISCF 361

Query: 1231 CKEGRLDLAISFLDYMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDV 1410
            CKEGRLDLAI  LD MIS GC PDIVNYNT+L+ALCKNG+AD+ALE+F  L E GCPP+V
Sbjct: 362  CKEGRLDLAIELLDCMISDGCLPDIVNYNTVLAALCKNGSADQALEIFENLGEVGCPPNV 421

Query: 1411 STYNTMVSALWNHGDRSRALMLISEMIMKGISPDEITYNSLISCLCRDGMVDRAIELLGD 1590
            S+YNTM SALWN GDR RAL ++S+M+ KGI PDEITYNSLISCLCRDGMV+ AI LL D
Sbjct: 422  SSYNTMFSALWNCGDRVRALGMVSDMVSKGIEPDEITYNSLISCLCRDGMVNEAIGLLVD 481

Query: 1591 MKNSEFLPTVVTYNIVLLGLCKARR 1665
            M+   F PTV+TYNIVLLGL KARR
Sbjct: 482  MEAGGFQPTVITYNIVLLGLSKARR 506



 Score =  226 bits (575), Expect = 3e-56
 Identities = 117/362 (32%), Positives = 200/362 (55%), Gaps = 1/362 (0%)
 Frame = +1

Query: 394  CKAGNYDEGLYFLECMVNLGHRADVILCTKLIKGFFNSKCVDKAVKVM-RILERYGEPDI 570
            C  G     L  ++ +V    +  VI  T LI+       +++A+K++  +L R  +PD+
Sbjct: 187  CSRGKLGLALQVMDRLVRDNCKPTVITYTILIEAIILDGGINEAMKLLDEMLSRGLKPDM 246

Query: 571  FAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKKMLDQ 750
            + YNA + G+C+   +D A + +    A+G +P+V++YNI++ +L NRGK +  + ++  
Sbjct: 247  YTYNAIVRGMCREGMLDRAFEFVKCFDAKGCAPNVISYNILLRALLNRGKWEEGENLVAN 306

Query: 751  LIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMCREGL 930
            +    C+P V+TY+ILI     +G   + M +   M  +GL PD Y+Y+ +I   C+EG 
Sbjct: 307  MCARGCEPNVVTYSILISTLCRDGKVEDGMNVLKIMKEKGLTPDAYSYDPLISCFCKEGR 366

Query: 931  MDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVVTYSI 1110
            +D A E +  + S GC PD+++YN +L AL   G  D   ++   +    C PNV +Y+ 
Sbjct: 367  LDLAIELLDCMISDGCLPDIVNYNTVLAALCKNGSADQALEIFENLGEVGCPPNVSSYNT 426

Query: 1111 LISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYMISSG 1290
            + SAL   G    A+ ++  M+ +G+ PD  TY+ LIS LC++G ++ AI  L  M + G
Sbjct: 427  MFSALWNCGDRVRALGMVSDMVSKGIEPDEITYNSLISCLCRDGMVNEAIGLLVDMEAGG 486

Query: 1291 CFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGDRSRAL 1470
              P ++ YN +L  L K     +A+EVF  + E GC P+ +TY  ++  +   G R+ A+
Sbjct: 487  FQPTVITYNIVLLGLSKARRIVDAIEVFTAMVEKGCRPNETTYILLIEGIGFAGWRAEAM 546

Query: 1471 ML 1476
             L
Sbjct: 547  EL 548



 Score =  140 bits (354), Expect = 1e-30
 Identities = 88/301 (29%), Positives = 148/301 (49%), Gaps = 3/301 (0%)
 Frame = +1

Query: 379  LLHRSCKAGNYDEGLYFLECMVNLGHRADVILCTKLIKGFFNSKCVDKAVKVMRILERYG 558
            LL      G ++EG   +  M   G   +V+  + LI        V+  + V++I++  G
Sbjct: 287  LLRALLNRGKWEEGENLVANMCARGCEPNVVTYSILISTLCRDGKVEDGMNVLKIMKEKG 346

Query: 559  -EPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAK 735
              PD ++Y+  IS  CK  ++D A ++L  M + G  PD+V YN ++ +LC  G  D A 
Sbjct: 347  LTPDAYSYDPLISCFCKEGRLDLAIELLDCMISDGCLPDIVNYNTVLAALCKNGSADQAL 406

Query: 736  KMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGM 915
            ++ + L E  C P V +Y  +  A    G    A+ +  +M+ +G++PD  TYN++I  +
Sbjct: 407  EIFENLGEVGCPPNVSSYNTMFSALWNCGDRVRALGMVSDMVSKGIEPDEITYNSLISCL 466

Query: 916  CREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNV 1095
            CR+G+++EA   +  + + G +P VI+YNI+L  L    +  D  ++   M    C PN 
Sbjct: 467  CRDGMVNEAIGLLVDMEAGGFQPTVITYNIVLLGLSKARRIVDAIEVFTAMVEKGCRPNE 526

Query: 1096 VTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEG--RLDLAISFL 1269
             TY +LI  +   G   EA+ L K +               +SA+C++   RL      L
Sbjct: 527  TTYILLIEGIGFAGWRAEAMELAKSVYS-------------LSAICEDSFKRLSRTFPML 573

Query: 1270 D 1272
            D
Sbjct: 574  D 574


>gb|EXB93167.1| hypothetical protein L484_024505 [Morus notabilis]
          Length = 587

 Score =  657 bits (1695), Expect = 0.0
 Identities = 315/495 (63%), Positives = 403/495 (81%), Gaps = 3/495 (0%)
 Frame = +1

Query: 190  FFTQHNKLSTRKSHKNSVFRCSNQIEPN---FRNYYRNPERVRVSTDTKPTHLPTYNGFK 360
            F  Q  + ++R+SH  +   C N  + +   +R   + P RVRVS +TK  +  + + F 
Sbjct: 15   FSPQPKQHTSRQSH--TCLSCRNPSQSSTDIYRKKNKKPLRVRVSVETKSPNSQSNSDFS 72

Query: 361  EAHFVKLLHRSCKAGNYDEGLYFLECMVNLGHRADVILCTKLIKGFFNSKCVDKAVKVMR 540
            E+H +K+++RSCK+G Y+E LYFLE MV+ G + DVILCTK+++GFFNS+ + KA++VM 
Sbjct: 73   ESHLLKVINRSCKSGKYNEALYFLELMVSKGFKPDVILCTKVMRGFFNSRNIPKAIRVME 132

Query: 541  ILERYGEPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGK 720
            ILE++GEPD+F+YNA ISG CK N+++ AN+VL  MR +GFSPD +TYNIMIGSLC+RGK
Sbjct: 133  ILEKHGEPDLFSYNAMISGFCKANRVELANKVLDRMRVQGFSPDTITYNIMIGSLCSRGK 192

Query: 721  LDLAKKMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNT 900
            +D+A K+LD+L+ DNC+P+VITYTILIEATI EGG ++AM++ +EML RGL PDM+TYN 
Sbjct: 193  VDMAFKVLDELLRDNCKPSVITYTILIEATISEGGVDKAMEVLEEMLSRGLLPDMFTYNA 252

Query: 901  IIRGMCREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTE 1080
            I+RGMCREG++D AFEFVRSL ++GC P+VISYNILLRALLN+GKW DGEK++ +M S  
Sbjct: 253  IVRGMCREGMLDRAFEFVRSLEAKGCSPNVISYNILLRALLNRGKWSDGEKILSDMVSRG 312

Query: 1081 CEPNVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAI 1260
            CEPNVVTYSILIS LCRDG++++A+N+LK M ++G+TPD Y+YDPLISA CKEGRLDLAI
Sbjct: 313  CEPNVVTYSILISTLCRDGKVEDAVNVLKAMKEKGITPDAYSYDPLISAFCKEGRLDLAI 372

Query: 1261 SFLDYMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSAL 1440
             F+DYMIS G  PDIVNYNTIL+ALCKNGNAD ALE+F KL E GCPP VS+YNTM SAL
Sbjct: 373  EFMDYMISDGSLPDIVNYNTILAALCKNGNADHALEIFEKLGEVGCPPTVSSYNTMFSAL 432

Query: 1441 WNHGDRSRALMLISEMIMKGISPDEITYNSLISCLCRDGMVDRAIELLGDMKNSEFLPTV 1620
            WN G+R +AL +ISEM+ K I+PDEITYNSLISCLCR+GMV+ AI LL DM+   F  +V
Sbjct: 433  WNCGERIKALEMISEMVSKRINPDEITYNSLISCLCREGMVNEAIGLLIDMEAGGFKLSV 492

Query: 1621 VTYNIVLLGLCKARR 1665
            ++YNIVLLGLCKARR
Sbjct: 493  ISYNIVLLGLCKARR 507



 Score =  238 bits (606), Expect = 8e-60
 Identities = 122/362 (33%), Positives = 205/362 (56%), Gaps = 1/362 (0%)
 Frame = +1

Query: 394  CKAGNYDEGLYFLECMVNLGHRADVILCTKLIKGFFNSKCVDKAVKVMR-ILERYGEPDI 570
            C  G  D     L+ ++    +  VI  T LI+   +   VDKA++V+  +L R   PD+
Sbjct: 188  CSRGKVDMAFKVLDELLRDNCKPSVITYTILIEATISEGGVDKAMEVLEEMLSRGLLPDM 247

Query: 571  FAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKKMLDQ 750
            F YNA + G+C+   +D A + + S+ A+G SP+V++YNI++ +L NRGK    +K+L  
Sbjct: 248  FTYNAIVRGMCREGMLDRAFEFVRSLEAKGCSPNVISYNILLRALLNRGKWSDGEKILSD 307

Query: 751  LIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMCREGL 930
            ++   C+P V+TY+ILI     +G   +A+ +   M  +G+ PD Y+Y+ +I   C+EG 
Sbjct: 308  MVSRGCEPNVVTYSILISTLCRDGKVEDAVNVLKAMKEKGITPDAYSYDPLISAFCKEGR 367

Query: 931  MDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVVTYSI 1110
            +D A EF+  + S G  PD+++YN +L AL   G  D   ++  ++    C P V +Y+ 
Sbjct: 368  LDLAIEFMDYMISDGSLPDIVNYNTILAALCKNGNADHALEIFEKLGEVGCPPTVSSYNT 427

Query: 1111 LISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYMISSG 1290
            + SAL   G+  +A+ ++  M+ + + PD  TY+ LIS LC+EG ++ AI  L  M + G
Sbjct: 428  MFSALWNCGERIKALEMISEMVSKRINPDEITYNSLISCLCREGMVNEAIGLLIDMEAGG 487

Query: 1291 CFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGDRSRAL 1470
                +++YN +L  LCK    D+A+E+   + E GC P+ +TY  ++  +   G R  A+
Sbjct: 488  FKLSVISYNIVLLGLCKARRIDDAIELLAAMVEKGCRPNETTYTLLIEGIGFAGWRVEAM 547

Query: 1471 ML 1476
             L
Sbjct: 548  GL 549



 Score =  152 bits (384), Expect = 4e-34
 Identities = 87/268 (32%), Positives = 142/268 (52%), Gaps = 1/268 (0%)
 Frame = +1

Query: 379  LLHRSCKAGNYDEGLYFLECMVNLGHRADVILCTKLIKGFFNSKCVDKAVKVMRILERYG 558
            LL      G + +G   L  MV+ G   +V+  + LI        V+ AV V++ ++  G
Sbjct: 288  LLRALLNRGKWSDGEKILSDMVSRGCEPNVVTYSILISTLCRDGKVEDAVNVLKAMKEKG 347

Query: 559  -EPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAK 735
              PD ++Y+  IS  CK  ++D A + +  M + G  PD+V YN ++ +LC  G  D A 
Sbjct: 348  ITPDAYSYDPLISAFCKEGRLDLAIEFMDYMISDGSLPDIVNYNTILAALCKNGNADHAL 407

Query: 736  KMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGM 915
            ++ ++L E  C PTV +Y  +  A    G   +A+++  EM+ + + PD  TYN++I  +
Sbjct: 408  EIFEKLGEVGCPPTVSSYNTMFSALWNCGERIKALEMISEMVSKRINPDEITYNSLISCL 467

Query: 916  CREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNV 1095
            CREG+++EA   +  + + G K  VISYNI+L  L    + DD  +L+  M    C PN 
Sbjct: 468  CREGMVNEAIGLLIDMEAGGFKLSVISYNIVLLGLCKARRIDDAIELLAAMVEKGCRPNE 527

Query: 1096 VTYSILISALCRDGQLDEAINLLKVMLD 1179
             TY++LI  +   G   EA+ L  ++ D
Sbjct: 528  TTYTLLIEGIGFAGWRVEAMGLANLLFD 555


>ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223538784|gb|EEF40384.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 584

 Score =  657 bits (1694), Expect = 0.0
 Identities = 316/494 (63%), Positives = 401/494 (81%)
 Frame = +1

Query: 184  VSFFTQHNKLSTRKSHKNSVFRCSNQIEPNFRNYYRNPERVRVSTDTKPTHLPTYNGFKE 363
            +SF TQ  K ++   H +++  C    E N  N  RNP++VRVS +T+ TH+ +++ FKE
Sbjct: 13   ISFTTQPLKPTSNSLH-STIVSCIRP-ELNDANKVRNPQKVRVSAETRQTHVLSFD-FKE 69

Query: 364  AHFVKLLHRSCKAGNYDEGLYFLECMVNLGHRADVILCTKLIKGFFNSKCVDKAVKVMRI 543
             H +KLL+RSC+AG Y+E LYFLECMV+ G+  DVILCTKLIKGFFNS+ + KA +VM I
Sbjct: 70   VHLMKLLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEI 129

Query: 544  LERYGEPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKL 723
            LERYG+PD+FAYNA ISG  K NQ+++AN+VL  M++RGF PDVVTYNIMIGS C+RGKL
Sbjct: 130  LERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKL 189

Query: 724  DLAKKMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTI 903
            DLA ++ ++L++DNC+PTVITYTILIEATIL+GG + AMKL DEML +GL+PD  TYN I
Sbjct: 190  DLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAI 249

Query: 904  IRGMCREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTEC 1083
            IRGMC+E ++D+AFE +RSL+SRGCKPD+I+YNILLR LL++GKW +GEKL+ EM S  C
Sbjct: 250  IRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGC 309

Query: 1084 EPNVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAIS 1263
            +PNVVT+SILI  LCRDG+++EA+NLL+ M ++GL PD Y YDPLI+  C+EGRLDLA  
Sbjct: 310  KPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATE 369

Query: 1264 FLDYMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALW 1443
            FL+YMIS GC PDIVNYNTI++ LC+ G AD+ALEVF KL E GCPP+VS+YNT+ SALW
Sbjct: 370  FLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALW 429

Query: 1444 NHGDRSRALMLISEMIMKGISPDEITYNSLISCLCRDGMVDRAIELLGDMKNSEFLPTVV 1623
            + GDR RAL +I +++ +GI PDEITYNSLISCLCRDGMVD AIELL DM++  + P VV
Sbjct: 430  SSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVV 489

Query: 1624 TYNIVLLGLCKARR 1665
            +YNI+LLGLCK  R
Sbjct: 490  SYNIILLGLCKVNR 503



 Score =  256 bits (654), Expect = 2e-65
 Identities = 137/375 (36%), Positives = 214/375 (57%), Gaps = 2/375 (0%)
 Frame = +1

Query: 394  CKAGNYDEGLYFLECMVNLGHRADVILCTKLIKGFFNSKCVDKAVKVM-RILERYGEPDI 570
            C  G  D  L   E ++       VI  T LI+       +D A+K++  +L +  EPD 
Sbjct: 184  CSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDT 243

Query: 571  FAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKKMLDQ 750
              YNA I G+CK   +D A ++L S+ +RG  PD++TYNI++ +L +RGK    +K++ +
Sbjct: 244  LTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISE 303

Query: 751  LIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMCREGL 930
            +I   C+P V+T++ILI     +G   EA+ L   M  +GL+PD Y Y+ +I G CREG 
Sbjct: 304  MISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGR 363

Query: 931  MDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVVTYSI 1110
            +D A EF+  + S GC PD+++YN ++  L   GK D   ++  ++    C PNV +Y+ 
Sbjct: 364  LDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNT 423

Query: 1111 LISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYMISSG 1290
            L SAL   G    A+ ++  +L++G+ PD  TY+ LIS LC++G +D AI  L  M S  
Sbjct: 424  LFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGR 483

Query: 1291 CFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGDRSRAL 1470
              P++V+YN IL  LCK   A++A+EV   + E GC P+ +TY  ++  +   G R+ A+
Sbjct: 484  YRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAM 543

Query: 1471 MLISEMI-MKGISPD 1512
             L + +  M  IS D
Sbjct: 544  ELANSLHGMNAISED 558


>ref|XP_006296608.1| hypothetical protein CARUB_v10013258mg [Capsella rubella]
            gi|482565317|gb|EOA29506.1| hypothetical protein
            CARUB_v10013258mg [Capsella rubella]
          Length = 607

 Score =  656 bits (1693), Expect = 0.0
 Identities = 322/516 (62%), Positives = 401/516 (77%), Gaps = 22/516 (4%)
 Frame = +1

Query: 184  VSFFTQHNKLSTRKSH--------KNSVFRCSNQIEPNFRNYY--------RNPERVRVS 315
            + F+++  K ++  SH        ++S+   SN   PN  N          RN +     
Sbjct: 13   IPFYSKTQKHNSNSSHGLLLLSHNRSSLLSFSNS-NPNHDNVKSFSSSGAARNLQAATTQ 71

Query: 316  TDTKPTHLPTYN------GFKEAHFVKLLHRSCKAGNYDEGLYFLECMVNLGHRADVILC 477
              T PT    +       GF++   +K+ HRSC++GNY E L+ LE MV  G+  DVILC
Sbjct: 72   DATVPTERRQHQTHSHSLGFRDTQMLKIFHRSCRSGNYIESLHLLESMVRKGYNPDVILC 131

Query: 478  TKLIKGFFNSKCVDKAVKVMRILERYGEPDIFAYNAFISGLCKMNQIDSANQVLSSMRAR 657
            TKLIKGFF  + + KAV+VM ILE++G+PD+FAYNA I+G CKMN+ID A +VL  MR++
Sbjct: 132  TKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSK 191

Query: 658  GFSPDVVTYNIMIGSLCNRGKLDLAKKMLDQLIEDNCQPTVITYTILIEATILEGGTNEA 837
            GFSPD VTYNIMIGSLC+RGKL LA K+LDQL+ DNCQPTVITYTILIEAT+LEGG +EA
Sbjct: 192  GFSPDTVTYNIMIGSLCSRGKLVLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEA 251

Query: 838  MKLFDEMLLRGLQPDMYTYNTIIRGMCREGLMDEAFEFVRSLTSRGCKPDVISYNILLRA 1017
            +KL DEML RGL+PDM+TYNTIIRGMC+EG++D AFE VR+L  RGC+PDVISYNILLRA
Sbjct: 252  LKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELRGCEPDVISYNILLRA 311

Query: 1018 LLNQGKWDDGEKLMIEMFSTECEPNVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPD 1197
            LLNQGKW++GEKLM +MFS +C+PNVVTYSILI+ LCRDG+++EA+NLLK+M ++GL+PD
Sbjct: 312  LLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEALNLLKLMKEKGLSPD 371

Query: 1198 TYTYDPLISALCKEGRLDLAISFLDYMISSGCFPDIVNYNTILSALCKNGNADEALEVFG 1377
             Y+YDPLI+A C+EGRLDLAI FL+ MIS GC PDIVNYNT+L+ LCKNG AD+ALE+FG
Sbjct: 372  AYSYDPLIAAFCREGRLDLAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFG 431

Query: 1378 KLAENGCPPDVSTYNTMVSALWNHGDRSRALMLISEMIMKGISPDEITYNSLISCLCRDG 1557
            KL E GC P+ S+YNTM SALW+ GD+ RAL +ISEM+ +GI PDEITYNS+ISCLCR+G
Sbjct: 432  KLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMISEMVSQGIDPDEITYNSMISCLCREG 491

Query: 1558 MVDRAIELLGDMKNSEFLPTVVTYNIVLLGLCKARR 1665
            MVD A +LL DM++ EF P+VVTYNIVLLG CKA R
Sbjct: 492  MVDEAFDLLVDMRSCEFHPSVVTYNIVLLGFCKAHR 527



 Score =  249 bits (637), Expect = 2e-63
 Identities = 125/367 (34%), Positives = 209/367 (56%), Gaps = 1/367 (0%)
 Frame = +1

Query: 394  CKAGNYDEGLYFLECMVNLGHRADVILCTKLIKGFFNSKCVDKAVKVM-RILERYGEPDI 570
            C  G     L  L+ +++   +  VI  T LI+       VD+A+K++  +L R  +PD+
Sbjct: 208  CSRGKLVLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDM 267

Query: 571  FAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKKMLDQ 750
            F YN  I G+CK   +D A +++ ++  RG  PDV++YNI++ +L N+GK +  +K++ +
Sbjct: 268  FTYNTIIRGMCKEGMVDRAFEMVRNLELRGCEPDVISYNILLRALLNQGKWEEGEKLMTK 327

Query: 751  LIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMCREGL 930
            +  + C P V+TY+ILI     +G   EA+ L   M  +GL PD Y+Y+ +I   CREG 
Sbjct: 328  MFSEKCDPNVVTYSILITTLCRDGKIEEALNLLKLMKEKGLSPDAYSYDPLIAAFCREGR 387

Query: 931  MDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVVTYSI 1110
            +D A EF+ ++ S GC PD+++YN +L  L   GK D   ++  ++    C PN  +Y+ 
Sbjct: 388  LDLAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNT 447

Query: 1111 LISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYMISSG 1290
            + SAL   G    A++++  M+ +G+ PD  TY+ +IS LC+EG +D A   L  M S  
Sbjct: 448  MFSALWSSGDKIRALHMISEMVSQGIDPDEITYNSMISCLCREGMVDEAFDLLVDMRSCE 507

Query: 1291 CFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGDRSRAL 1470
              P +V YN +L   CK    ++A++V   +  NGC P+ STY  ++  +   G R+ A+
Sbjct: 508  FHPSVVTYNIVLLGFCKAHRIEDAIDVLESMVGNGCRPNESTYTVLIEGIGFAGYRAEAM 567

Query: 1471 MLISEMI 1491
             L ++++
Sbjct: 568  ELANDLV 574


>ref|XP_006371094.1| hypothetical protein POPTR_0019s03630g [Populus trichocarpa]
            gi|550316702|gb|ERP48891.1| hypothetical protein
            POPTR_0019s03630g [Populus trichocarpa]
          Length = 586

 Score =  656 bits (1692), Expect = 0.0
 Identities = 320/494 (64%), Positives = 400/494 (80%), Gaps = 2/494 (0%)
 Frame = +1

Query: 190  FFTQHNKLSTRKSHKNSVFRCSNQIEPNFRNYYRNPERVR-VSTDTKPTHLPTYNGFKEA 366
            F ++H KLS      N V  C N    +  +   NP ++R V  +TKPTH+ +Y+ FKE 
Sbjct: 17   FTSKHFKLSLHSLQSN-VVSCINPTHNDTNSNLGNPPKLRRVLPETKPTHVLSYD-FKET 74

Query: 367  HFVKLLHRSCKAGNYDEGLYFLECMVNLGHRADVILCTKLIKGFFNSKCVDKAVKVMRIL 546
            H +KLL+RSCKAG  +E LYFLECMV  G++ DVI+CTKLIKGFFNS+ ++KA +VM IL
Sbjct: 75   HLMKLLNRSCKAGKCNESLYFLECMVAKGYQPDVIMCTKLIKGFFNSRNIEKATRVMEIL 134

Query: 547  ERYGEPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLD 726
            E++GEPD+FAYNA ISG CK N+I+SA +VL  M+ +GFS DVVTYNIMIG+ C++GK+D
Sbjct: 135  EKHGEPDVFAYNAVISGFCKANRIESAKKVLDRMKRKGFSQDVVTYNIMIGTFCSKGKID 194

Query: 727  LAKKMLDQLIEDN-CQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTI 903
            LA K+ ++L++DN C+PT+ITYTILIEA ILEGG +E +KL DEML RGL+PD +TYN I
Sbjct: 195  LALKVFEELLKDNNCKPTLITYTILIEAHILEGGIDEGLKLLDEMLSRGLEPDTFTYNVI 254

Query: 904  IRGMCREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTEC 1083
            +RG+ +EG +++AFE VR+L SRGCKPDVI+YNILLRALL+QGKW +GEKLM EMFS  C
Sbjct: 255  VRGLGKEGKVNQAFELVRTLNSRGCKPDVITYNILLRALLDQGKWYEGEKLMDEMFSRGC 314

Query: 1084 EPNVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAIS 1263
            EPNVVTYSILIS+LCRDG+++E++NL+KVM ++GLTPD Y YDPLI+A C+EG+LD+AI 
Sbjct: 315  EPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIK 374

Query: 1264 FLDYMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALW 1443
            FLDYMIS G  PDIVNYNTI++ALCKNGN+D A+E+FGKL E GCPP+VS+YNTM+SALW
Sbjct: 375  FLDYMISDGFLPDIVNYNTIMAALCKNGNSDHAVEIFGKLEEVGCPPNVSSYNTMLSALW 434

Query: 1444 NHGDRSRALMLISEMIMKGISPDEITYNSLISCLCRDGMVDRAIELLGDMKNSEFLPTVV 1623
              GDR RAL +IS+M+  GI PD ITYNSLISCLCRDGMVD AI LL DM +  F P +V
Sbjct: 435  GSGDRYRALGMISQMLSTGIDPDGITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIV 494

Query: 1624 TYNIVLLGLCKARR 1665
            +YNIVLLGLCK  R
Sbjct: 495  SYNIVLLGLCKVHR 508



 Score =  244 bits (623), Expect = 8e-62
 Identities = 127/367 (34%), Positives = 211/367 (57%), Gaps = 2/367 (0%)
 Frame = +1

Query: 394  CKAGNYDEGL-YFLECMVNLGHRADVILCTKLIKGFFNSKCVDKAVKVM-RILERYGEPD 567
            C  G  D  L  F E + +   +  +I  T LI+       +D+ +K++  +L R  EPD
Sbjct: 188  CSKGKIDLALKVFEELLKDNNCKPTLITYTILIEAHILEGGIDEGLKLLDEMLSRGLEPD 247

Query: 568  IFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKKMLD 747
             F YN  + GL K  +++ A +++ ++ +RG  PDV+TYNI++ +L ++GK    +K++D
Sbjct: 248  TFTYNVIVRGLGKEGKVNQAFELVRTLNSRGCKPDVITYNILLRALLDQGKWYEGEKLMD 307

Query: 748  QLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMCREG 927
            ++    C+P V+TY+ILI +   +G   E++ L   M  +GL PD Y Y+ +I   CREG
Sbjct: 308  EMFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREG 367

Query: 928  LMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVVTYS 1107
             +D A +F+  + S G  PD+++YN ++ AL   G  D   ++  ++    C PNV +Y+
Sbjct: 368  KLDMAIKFLDYMISDGFLPDIVNYNTIMAALCKNGNSDHAVEIFGKLEEVGCPPNVSSYN 427

Query: 1108 ILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYMISS 1287
             ++SAL   G    A+ ++  ML  G+ PD  TY+ LIS LC++G +D AI  L  M+S 
Sbjct: 428  TMLSALWGSGDRYRALGMISQMLSTGIDPDGITYNSLISCLCRDGMVDEAIGLLADMLSG 487

Query: 1288 GCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGDRSRA 1467
               P+IV+YN +L  LCK    D+A+EV   + ENGC P+ +TY  ++  +   G R++A
Sbjct: 488  RFQPNIVSYNIVLLGLCKVHRIDDAIEVLTAMIENGCQPNETTYTLLIEGIGFSGSRAQA 547

Query: 1468 LMLISEM 1488
            + L + +
Sbjct: 548  MELANSL 554



 Score =  158 bits (400), Expect = 6e-36
 Identities = 98/365 (26%), Positives = 172/365 (47%), Gaps = 36/365 (9%)
 Frame = +1

Query: 298  ERVRVSTDTKPTHLPTYNGFKEAHFVKLLHRSCKAGNYDEGLYFLECMVNLGHRADVILC 477
            E +    + KPT L TY    EAH ++        G  DEGL  L+ M++ G   D    
Sbjct: 201  EELLKDNNCKPT-LITYTILIEAHILE--------GGIDEGLKLLDEMLSRGLEPDTFTY 251

Query: 478  TKLIKGFFNSKCVDKAVKVMRILERYG--------------------------------- 558
              +++G      V++A +++R L   G                                 
Sbjct: 252  NVIVRGLGKEGKVNQAFELVRTLNSRGCKPDVITYNILLRALLDQGKWYEGEKLMDEMFS 311

Query: 559  ---EPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDL 729
               EP++  Y+  IS LC+  +I+ +  ++  M+ +G +PD   Y+ +I + C  GKLD+
Sbjct: 312  RGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDM 371

Query: 730  AKKMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIR 909
            A K LD +I D   P ++ Y  ++ A    G ++ A+++F ++   G  P++ +YNT++ 
Sbjct: 372  AIKFLDYMISDGFLPDIVNYNTIMAALCKNGNSDHAVEIFGKLEEVGCPPNVSSYNTMLS 431

Query: 910  GMCREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEP 1089
             +   G    A   +  + S G  PD I+YN L+  L   G  D+   L+ +M S   +P
Sbjct: 432  ALWGSGDRYRALGMISQMLSTGIDPDGITYNSLISCLCRDGMVDEAIGLLADMLSGRFQP 491

Query: 1090 NVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFL 1269
            N+V+Y+I++  LC+  ++D+AI +L  M++ G  P+  TY  LI  +   G    A+   
Sbjct: 492  NIVSYNIVLLGLCKVHRIDDAIEVLTAMIENGCQPNETTYTLLIEGIGFSGSRAQAMELA 551

Query: 1270 DYMIS 1284
            + + S
Sbjct: 552  NSLYS 556


>ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At3g04760, chloroplastic; Flags: Precursor
            gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein
            [Arabidopsis thaliana] gi|15810359|gb|AAL07067.1| unknown
            protein [Arabidopsis thaliana] gi|22136960|gb|AAM91709.1|
            unknown protein [Arabidopsis thaliana]
            gi|332640611|gb|AEE74132.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  656 bits (1692), Expect = 0.0
 Identities = 318/498 (63%), Positives = 392/498 (78%), Gaps = 8/498 (1%)
 Frame = +1

Query: 196  TQHNKLSTRKSHKNSVFRCSNQIEPNFRNYYRNPERVRVSTDTKPTHLPTYN-------- 351
            + H  L +        F  SN    N R++  +  R   +T T    LPT          
Sbjct: 26   SSHGLLLSHNRSSLLTFSNSNPNNDNGRSFSSSGARNLQTTTTTDATLPTERRQQHSQSL 85

Query: 352  GFKEAHFVKLLHRSCKAGNYDEGLYFLECMVNLGHRADVILCTKLIKGFFNSKCVDKAVK 531
            GF++   +K+ HRSC++GNY E L+ LE MV  G+  DVILCTKLIKGFF  + + KAV+
Sbjct: 86   GFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVR 145

Query: 532  VMRILERYGEPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCN 711
            VM ILE++G+PD+FAYNA I+G CKMN+ID A +VL  MR++ FSPD VTYNIMIGSLC+
Sbjct: 146  VMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCS 205

Query: 712  RGKLDLAKKMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYT 891
            RGKLDLA K+L+QL+ DNCQPTVITYTILIEAT+LEGG +EA+KL DEML RGL+PDM+T
Sbjct: 206  RGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFT 265

Query: 892  YNTIIRGMCREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMF 1071
            YNTIIRGMC+EG++D AFE VR+L  +GC+PDVISYNILLRALLNQGKW++GEKLM +MF
Sbjct: 266  YNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMF 325

Query: 1072 STECEPNVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLD 1251
            S +C+PNVVTYSILI+ LCRDG+++EA+NLLK+M ++GLTPD Y+YDPLI+A C+EGRLD
Sbjct: 326  SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 385

Query: 1252 LAISFLDYMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMV 1431
            +AI FL+ MIS GC PDIVNYNT+L+ LCKNG AD+ALE+FGKL E GC P+ S+YNTM 
Sbjct: 386  VAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMF 445

Query: 1432 SALWNHGDRSRALMLISEMIMKGISPDEITYNSLISCLCRDGMVDRAIELLGDMKNSEFL 1611
            SALW+ GD+ RAL +I EM+  GI PDEITYNS+ISCLCR+GMVD A ELL DM++ EF 
Sbjct: 446  SALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFH 505

Query: 1612 PTVVTYNIVLLGLCKARR 1665
            P+VVTYNIVLLG CKA R
Sbjct: 506  PSVVTYNIVLLGFCKAHR 523



 Score =  250 bits (639), Expect = 1e-63
 Identities = 126/367 (34%), Positives = 207/367 (56%), Gaps = 1/367 (0%)
 Frame = +1

Query: 394  CKAGNYDEGLYFLECMVNLGHRADVILCTKLIKGFFNSKCVDKAVKVM-RILERYGEPDI 570
            C  G  D  L  L  +++   +  VI  T LI+       VD+A+K+M  +L R  +PD+
Sbjct: 204  CSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDM 263

Query: 571  FAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKKMLDQ 750
            F YN  I G+CK   +D A +++ ++  +G  PDV++YNI++ +L N+GK +  +K++ +
Sbjct: 264  FTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTK 323

Query: 751  LIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMCREGL 930
            +  + C P V+TY+ILI     +G   EAM L   M  +GL PD Y+Y+ +I   CREG 
Sbjct: 324  MFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGR 383

Query: 931  MDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVVTYSI 1110
            +D A EF+ ++ S GC PD+++YN +L  L   GK D   ++  ++    C PN  +Y+ 
Sbjct: 384  LDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNT 443

Query: 1111 LISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYMISSG 1290
            + SAL   G    A++++  M+  G+ PD  TY+ +IS LC+EG +D A   L  M S  
Sbjct: 444  MFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCE 503

Query: 1291 CFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGDRSRAL 1470
              P +V YN +L   CK    ++A+ V   +  NGC P+ +TY  ++  +   G R+ A+
Sbjct: 504  FHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAM 563

Query: 1471 MLISEMI 1491
             L ++++
Sbjct: 564  ELANDLV 570


>ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297330308|gb|EFH60727.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 598

 Score =  655 bits (1691), Expect = 0.0
 Identities = 317/491 (64%), Positives = 390/491 (79%), Gaps = 11/491 (2%)
 Frame = +1

Query: 226  SHKNSVFRCSNQIEPNF-----------RNYYRNPERVRVSTDTKPTHLPTYNGFKEAHF 372
            SH  S+   SN   PN            RN         + T+ +  H  +  GF++   
Sbjct: 31   SHNRSLLTFSNS-NPNHDNGKSFSSSGARNLQATTTDAAIPTERRQQHSQSL-GFRDTQM 88

Query: 373  VKLLHRSCKAGNYDEGLYFLECMVNLGHRADVILCTKLIKGFFNSKCVDKAVKVMRILER 552
            +K+ HRSC++GNY E L+ LE MV  G+  DVILCTKLIKGFF  + V KAV+VM ILE+
Sbjct: 89   LKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEK 148

Query: 553  YGEPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLA 732
            +G+PD+FAYNA I+G CKMN+ID A +VL  MR++ FSPD VTYNIMIGSLC+RGKLDLA
Sbjct: 149  FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 208

Query: 733  KKMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRG 912
             K+LDQL+ DNCQPTVITYTILIEAT+LEGG +EA+KL DEML RGL+PDM+TYNTIIRG
Sbjct: 209  LKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRG 268

Query: 913  MCREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPN 1092
            MC+EG++D AFE +R+L  +GC+PDVISYNILLRALLNQGKW++GEKLM +MFS +C+PN
Sbjct: 269  MCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 328

Query: 1093 VVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLD 1272
            VVTYSILI+ LCRDG+++EA+NLLK+M ++GLTPD Y+YDPLI+A C+EGRLD+AI FL+
Sbjct: 329  VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 388

Query: 1273 YMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHG 1452
             MIS GC PDIVNYNT+L+ LCKNG AD+ALE+FGKL E GC P+ S+YNTM SALW+ G
Sbjct: 389  TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 448

Query: 1453 DRSRALMLISEMIMKGISPDEITYNSLISCLCRDGMVDRAIELLGDMKNSEFLPTVVTYN 1632
            D+ RAL +I EM+  GI PDEITYNS+ISCLCR+GMVD+A ELL DM++ EF P+VVTYN
Sbjct: 449  DKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYN 508

Query: 1633 IVLLGLCKARR 1665
            IVLLG CKA R
Sbjct: 509  IVLLGFCKAHR 519



 Score =  251 bits (642), Expect = 5e-64
 Identities = 125/367 (34%), Positives = 209/367 (56%), Gaps = 1/367 (0%)
 Frame = +1

Query: 394  CKAGNYDEGLYFLECMVNLGHRADVILCTKLIKGFFNSKCVDKAVKVM-RILERYGEPDI 570
            C  G  D  L  L+ +++   +  VI  T LI+       VD+A+K++  +L R  +PD+
Sbjct: 200  CSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDM 259

Query: 571  FAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKKMLDQ 750
            F YN  I G+CK   +D A +++ ++  +G  PDV++YNI++ +L N+GK +  +K++ +
Sbjct: 260  FTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTK 319

Query: 751  LIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMCREGL 930
            +  + C P V+TY+ILI     +G   EAM L   M  +GL PD Y+Y+ +I   CREG 
Sbjct: 320  MFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGR 379

Query: 931  MDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVVTYSI 1110
            +D A EF+ ++ S GC PD+++YN +L  L   GK D   ++  ++    C PN  +Y+ 
Sbjct: 380  LDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNT 439

Query: 1111 LISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYMISSG 1290
            + SAL   G    A++++  M+  G+ PD  TY+ +IS LC+EG +D A   L  M S  
Sbjct: 440  MFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCE 499

Query: 1291 CFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGDRSRAL 1470
              P +V YN +L   CK    ++A++V   +  NGC P+ +TY  ++  +   G R+ A+
Sbjct: 500  FHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAM 559

Query: 1471 MLISEMI 1491
             L ++++
Sbjct: 560  ELANDLV 566


>dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  652 bits (1682), Expect = 0.0
 Identities = 317/498 (63%), Positives = 391/498 (78%), Gaps = 8/498 (1%)
 Frame = +1

Query: 196  TQHNKLSTRKSHKNSVFRCSNQIEPNFRNYYRNPERVRVSTDTKPTHLPTYN-------- 351
            + H  L +        F  SN    N R++  +  R   +T T    LPT          
Sbjct: 26   SSHGLLLSHNRSSLLTFSNSNPNNDNGRSFSSSGARNLQTTTTTDATLPTERRQQHSQSL 85

Query: 352  GFKEAHFVKLLHRSCKAGNYDEGLYFLECMVNLGHRADVILCTKLIKGFFNSKCVDKAVK 531
            GF++   +K+ HRSC++GNY E L+ LE MV  G+  DVILCTKLIKGFF  + + KAV+
Sbjct: 86   GFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVR 145

Query: 532  VMRILERYGEPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCN 711
            VM ILE++G+PD+FAYNA I+G CKMN+ID A +VL  MR++ FSPD VTYNIMIGSLC+
Sbjct: 146  VMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCS 205

Query: 712  RGKLDLAKKMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYT 891
            RGKLDLA K+L+QL+ DNCQPTVITYTILIEAT+LEGG +EA+KL DEML RGL+PDM+T
Sbjct: 206  RGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFT 265

Query: 892  YNTIIRGMCREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMF 1071
            YNTIIRGMC+EG++D AFE VR+L  +G +PDVISYNILLRALLNQGKW++GEKLM +MF
Sbjct: 266  YNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMF 325

Query: 1072 STECEPNVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLD 1251
            S +C+PNVVTYSILI+ LCRDG+++EA+NLLK+M ++GLTPD Y+YDPLI+A C+EGRLD
Sbjct: 326  SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 385

Query: 1252 LAISFLDYMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMV 1431
            +AI FL+ MIS GC PDIVNYNT+L+ LCKNG AD+ALE+FGKL E GC P+ S+YNTM 
Sbjct: 386  VAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMF 445

Query: 1432 SALWNHGDRSRALMLISEMIMKGISPDEITYNSLISCLCRDGMVDRAIELLGDMKNSEFL 1611
            SALW+ GD+ RAL +I EM+  GI PDEITYNS+ISCLCR+GMVD A ELL DM++ EF 
Sbjct: 446  SALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFH 505

Query: 1612 PTVVTYNIVLLGLCKARR 1665
            P+VVTYNIVLLG CKA R
Sbjct: 506  PSVVTYNIVLLGFCKAHR 523



 Score =  250 bits (639), Expect = 1e-63
 Identities = 126/367 (34%), Positives = 207/367 (56%), Gaps = 1/367 (0%)
 Frame = +1

Query: 394  CKAGNYDEGLYFLECMVNLGHRADVILCTKLIKGFFNSKCVDKAVKVM-RILERYGEPDI 570
            C  G  D  L  L  +++   +  VI  T LI+       VD+A+K+M  +L R  +PD+
Sbjct: 204  CSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDM 263

Query: 571  FAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKKMLDQ 750
            F YN  I G+CK   +D A +++ ++  +G  PDV++YNI++ +L N+GK +  +K++ +
Sbjct: 264  FTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTK 323

Query: 751  LIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMCREGL 930
            +  + C P V+TY+ILI     +G   EAM L   M  +GL PD Y+Y+ +I   CREG 
Sbjct: 324  MFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGR 383

Query: 931  MDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVVTYSI 1110
            +D A EF+ ++ S GC PD+++YN +L  L   GK D   ++  ++    C PN  +Y+ 
Sbjct: 384  LDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNT 443

Query: 1111 LISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYMISSG 1290
            + SAL   G    A++++  M+  G+ PD  TY+ +IS LC+EG +D A   L  M S  
Sbjct: 444  MFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCE 503

Query: 1291 CFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGDRSRAL 1470
              P +V YN +L   CK    ++A+ V   +  NGC P+ +TY  ++  +   G R+ A+
Sbjct: 504  FHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAM 563

Query: 1471 MLISEMI 1491
             L ++++
Sbjct: 564  ELANDLV 570


>ref|XP_006487702.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
            chloroplastic-like [Citrus sinensis]
          Length = 583

 Score =  646 bits (1667), Expect = 0.0
 Identities = 319/499 (63%), Positives = 402/499 (80%), Gaps = 5/499 (1%)
 Frame = +1

Query: 184  VSFFTQHNKLSTRKSH--KNSVFRCSNQIEPNFRNYYRNPERVRVST--DTKP-THLPTY 348
            V F +QH +L    SH  +++V  C N          ++ ERVRVS+  +T+P THL ++
Sbjct: 15   VIFTSQHQQLKPTTSHSVQSTVVSCINP---------KSNERVRVSSSAETRPNTHLLSF 65

Query: 349  NGFKEAHFVKLLHRSCKAGNYDEGLYFLECMVNLGHRADVILCTKLIKGFFNSKCVDKAV 528
            +  KE  F+KL+ +S +AG +DE LYF+E MV  G + DV++CTKLIK FF  +  +KAV
Sbjct: 66   D-VKETQFMKLIKKSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 124

Query: 529  KVMRILERYGEPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLC 708
            +VM ILE+YGEPD+FAYNA ISG CK NQI+ AN+VL  +R+RGFSPDVVTYNIMIGSLC
Sbjct: 125  RVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 184

Query: 709  NRGKLDLAKKMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMY 888
            +RG ++ A K+ DQL+ DNC+PTVITYTILI+AT+LEG T++AMKL DEML RGL PDM+
Sbjct: 185  SRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMLARGLIPDMF 244

Query: 889  TYNTIIRGMCREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEM 1068
            T N IIRGMC++G++ +AF+FVRSL SRGC+PDVISYN+LLR LLN GKW++GEKLM EM
Sbjct: 245  TNNAIIRGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 304

Query: 1069 FSTECEPNVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRL 1248
             S   EPNVVTYSILIS+LCRDG+ ++A+++L+   ++GLTPD Y+YDPLISA CK+GRL
Sbjct: 305  ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 364

Query: 1249 DLAISFLDYMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTM 1428
            DLAI FLDYMIS GC PDIVNYNTIL+A CKNGNAD+ALE+F KL++ GCPP+VS+YNTM
Sbjct: 365  DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 424

Query: 1429 VSALWNHGDRSRALMLISEMIMKGISPDEITYNSLISCLCRDGMVDRAIELLGDMKNSEF 1608
             SALW+ GD+ RAL +ISEM+ KGI PDEITYNSLISCLCRDGMVD A+ LL DM+++ F
Sbjct: 425  FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 484

Query: 1609 LPTVVTYNIVLLGLCKARR 1665
             PTV++YNI++LG CK RR
Sbjct: 485  RPTVISYNIIILGFCKTRR 503



 Score =  235 bits (599), Expect = 5e-59
 Identities = 123/375 (32%), Positives = 208/375 (55%), Gaps = 2/375 (0%)
 Frame = +1

Query: 394  CKAGNYDEGLYFLECMVNLGHRADVILCTKLIKGFFNSKCVDKAVKVM-RILERYGEPDI 570
            C  G  +      + ++    +  VI  T LI+        DKA+K++  +L R   PD+
Sbjct: 184  CSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMLARGLIPDM 243

Query: 571  FAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKKMLDQ 750
            F  NA I G+CK   +  A Q + S+ +RG  PDV++YN+++ +L N GK +  +K++ +
Sbjct: 244  FTNNAIIRGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 303

Query: 751  LIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMCREGL 930
            +I    +P V+TY+ILI +   +G T +A+ +      +GL PD Y+Y+ +I   C++G 
Sbjct: 304  MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 363

Query: 931  MDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVVTYSI 1110
            +D A EF+  + S GC PD+++YN +L A    G  D   ++  ++    C PNV +Y+ 
Sbjct: 364  LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 423

Query: 1111 LISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYMISSG 1290
            + SAL   G    A+ ++  ML +G+ PD  TY+ LIS LC++G +D A+  L  M S+ 
Sbjct: 424  MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 483

Query: 1291 CFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGDRSRAL 1470
              P +++YN I+   CK    +E++EV   + E GC P+ +TY  ++  +   G R+ A+
Sbjct: 484  FRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 543

Query: 1471 MLISEMI-MKGISPD 1512
             L + ++ M  IS D
Sbjct: 544  ELANALVSMHAISRD 558


>ref|XP_006442665.1| hypothetical protein CICLE_v10019446mg [Citrus clementina]
            gi|557544927|gb|ESR55905.1| hypothetical protein
            CICLE_v10019446mg [Citrus clementina]
          Length = 583

 Score =  642 bits (1657), Expect = 0.0
 Identities = 318/499 (63%), Positives = 399/499 (79%), Gaps = 5/499 (1%)
 Frame = +1

Query: 184  VSFFTQHNKLSTRKSH--KNSVFRCSNQIEPNFRNYYRNPERVRVST--DTKP-THLPTY 348
            V F +QH +     SH  +++V  C N          ++ ERVRVS+  +T+P THL ++
Sbjct: 15   VIFTSQHQQQKPTTSHSVQSTVVSCINP---------KSNERVRVSSSAETRPNTHLLSF 65

Query: 349  NGFKEAHFVKLLHRSCKAGNYDEGLYFLECMVNLGHRADVILCTKLIKGFFNSKCVDKAV 528
            +  KE  F+KL+ RS +AG +DE LYF+E MV  G + DV++CTKLIK FF  +  +KAV
Sbjct: 66   D-VKETQFMKLIKRSFRAGKFDESLYFIESMVANGCKPDVVMCTKLIKKFFQERKSNKAV 124

Query: 529  KVMRILERYGEPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLC 708
            +VM ILE+YGEPD+FAYNA ISG CK NQI+ AN+VL  +R+RGFSPDVVTYNIMIGSLC
Sbjct: 125  RVMEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLC 184

Query: 709  NRGKLDLAKKMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMY 888
            +RG ++   K+ DQL+ DNC+PTVITYTILI+AT+LEG T++AMKL DEM  RGL PDM+
Sbjct: 185  SRGMIESGFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMFARGLIPDMF 244

Query: 889  TYNTIIRGMCREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEM 1068
            T N IIRGMC++G++ +AF+FVRSL SRGC+PDVISYN+LLR LLN GKW++GEKLM EM
Sbjct: 245  TNNAIIRGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEM 304

Query: 1069 FSTECEPNVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRL 1248
             S   EPNVVTYSILIS+LCRDG+ ++A+++L+   ++GLTPD Y+YDPLISA CK+GRL
Sbjct: 305  ISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRL 364

Query: 1249 DLAISFLDYMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTM 1428
            DLAI FLDYMIS GC PDIVNYNTIL+A CKNGNAD+ALE+F KL++ GCPP+VS+YNTM
Sbjct: 365  DLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTM 424

Query: 1429 VSALWNHGDRSRALMLISEMIMKGISPDEITYNSLISCLCRDGMVDRAIELLGDMKNSEF 1608
             SALW+ GD+ RAL +ISEM+ KGI PDEITYNSLISCLCRDGMVD A+ LL DM+++ F
Sbjct: 425  FSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRF 484

Query: 1609 LPTVVTYNIVLLGLCKARR 1665
             PTVV+YNI++LG CK RR
Sbjct: 485  RPTVVSYNIIILGFCKTRR 503



 Score =  237 bits (605), Expect = 1e-59
 Identities = 125/375 (33%), Positives = 208/375 (55%), Gaps = 2/375 (0%)
 Frame = +1

Query: 394  CKAGNYDEGLYFLECMVNLGHRADVILCTKLIKGFFNSKCVDKAVKVM-RILERYGEPDI 570
            C  G  + G    + ++    +  VI  T LI+        DKA+K++  +  R   PD+
Sbjct: 184  CSRGMIESGFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMFARGLIPDM 243

Query: 571  FAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKKMLDQ 750
            F  NA I G+CK   +  A Q + S+ +RG  PDV++YN+++ +L N GK +  +K++ +
Sbjct: 244  FTNNAIIRGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTE 303

Query: 751  LIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMCREGL 930
            +I    +P V+TY+ILI +   +G T +A+ +      +GL PD Y+Y+ +I   C++G 
Sbjct: 304  MISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGR 363

Query: 931  MDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVVTYSI 1110
            +D A EF+  + S GC PD+++YN +L A    G  D   ++  ++    C PNV +Y+ 
Sbjct: 364  LDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNT 423

Query: 1111 LISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYMISSG 1290
            + SAL   G    A+ ++  ML +G+ PD  TY+ LIS LC++G +D A+  L  M S+ 
Sbjct: 424  MFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTR 483

Query: 1291 CFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGDRSRAL 1470
              P +V+YN I+   CK    +EA+EV   + E GC P+ +TY  ++  +   G R+ A+
Sbjct: 484  FRPTVVSYNIIILGFCKTRRINEAIEVLAAMFEKGCKPNETTYVLLIEGIGYGGWRAEAM 543

Query: 1471 MLISEMI-MKGISPD 1512
             L + ++ M  IS D
Sbjct: 544  ELANALVSMHAISRD 558


>gb|EMJ06317.1| hypothetical protein PRUPE_ppa004835mg [Prunus persica]
          Length = 489

 Score =  636 bits (1640), Expect = e-180
 Identities = 300/409 (73%), Positives = 360/409 (88%)
 Frame = +1

Query: 439  MVNLGHRADVILCTKLIKGFFNSKCVDKAVKVMRILERYGEPDIFAYNAFISGLCKMNQI 618
            MVN G++ DVILCTKLIKGFFNS+ ++KA++VM+ILE+YGEPD+F+YNA ISG CK N+I
Sbjct: 1    MVNKGYKPDVILCTKLIKGFFNSRNIEKAIRVMQILEKYGEPDLFSYNALISGFCKANRI 60

Query: 619  DSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKKMLDQLIEDNCQPTVITYTIL 798
            +SAN+VL  MR++GFSPDVVTYNIMIGSLC+RGKL LA K++DQL++DNC+PTVITYTIL
Sbjct: 61   ESANKVLDRMRSQGFSPDVVTYNIMIGSLCSRGKLGLALKVMDQLVKDNCRPTVITYTIL 120

Query: 799  IEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMCREGLMDEAFEFVRSLTSRGC 978
            IEATI++GG +EAMKL DEML RGL+PDMYTYN +IRGMCREG++D AF+FVRSL S+GC
Sbjct: 121  IEATIVDGGIDEAMKLLDEMLSRGLKPDMYTYNAVIRGMCREGMLDRAFQFVRSLDSKGC 180

Query: 979  KPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVVTYSILISALCRDGQLDEAIN 1158
             P+VISYNILLRALLN+GKW++GEKL+  M S  CEPNVVTYSILIS LCRDG++++A+N
Sbjct: 181  PPNVISYNILLRALLNRGKWEEGEKLVTNMCSRGCEPNVVTYSILISTLCRDGKVEDAVN 240

Query: 1159 LLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYMISSGCFPDIVNYNTILSALC 1338
            +LK+M  +GLTPD Y+YDPL+SA CKEGRLDLAI FLDYMIS GC PDIVNYNTIL+ALC
Sbjct: 241  VLKIMKKKGLTPDAYSYDPLVSAFCKEGRLDLAIEFLDYMISDGCLPDIVNYNTILAALC 300

Query: 1339 KNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGDRSRALMLISEMIMKGISPDEI 1518
            K+G AD+AL++F  L E GCPP+VS+YNTM SALWN GDR RAL ++SEM+ KGI PDEI
Sbjct: 301  KSGKADQALQIFENLGEVGCPPNVSSYNTMFSALWNCGDRVRALGMVSEMVGKGIKPDEI 360

Query: 1519 TYNSLISCLCRDGMVDRAIELLGDMKNSEFLPTVVTYNIVLLGLCKARR 1665
            TYNSLISCLCRDGMVD AI LL DM+   F PTV++YNI+LLGLCK RR
Sbjct: 361  TYNSLISCLCRDGMVDEAIGLLVDMETGGFQPTVISYNIILLGLCKTRR 409



 Score =  244 bits (624), Expect = 6e-62
 Identities = 127/375 (33%), Positives = 214/375 (57%), Gaps = 2/375 (0%)
 Frame = +1

Query: 394  CKAGNYDEGLYFLECMVNLGHRADVILCTKLIKGFFNSKCVDKAVKVM-RILERYGEPDI 570
            C  G     L  ++ +V    R  VI  T LI+       +D+A+K++  +L R  +PD+
Sbjct: 90   CSRGKLGLALKVMDQLVKDNCRPTVITYTILIEATIVDGGIDEAMKLLDEMLSRGLKPDM 149

Query: 571  FAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKKMLDQ 750
            + YNA I G+C+   +D A Q + S+ ++G  P+V++YNI++ +L NRGK +  +K++  
Sbjct: 150  YTYNAVIRGMCREGMLDRAFQFVRSLDSKGCPPNVISYNILLRALLNRGKWEEGEKLVTN 209

Query: 751  LIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMCREGL 930
            +    C+P V+TY+ILI     +G   +A+ +   M  +GL PD Y+Y+ ++   C+EG 
Sbjct: 210  MCSRGCEPNVVTYSILISTLCRDGKVEDAVNVLKIMKKKGLTPDAYSYDPLVSAFCKEGR 269

Query: 931  MDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVVTYSI 1110
            +D A EF+  + S GC PD+++YN +L AL   GK D   ++   +    C PNV +Y+ 
Sbjct: 270  LDLAIEFLDYMISDGCLPDIVNYNTILAALCKSGKADQALQIFENLGEVGCPPNVSSYNT 329

Query: 1111 LISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYMISSG 1290
            + SAL   G    A+ ++  M+ +G+ PD  TY+ LIS LC++G +D AI  L  M + G
Sbjct: 330  MFSALWNCGDRVRALGMVSEMVGKGIKPDEITYNSLISCLCRDGMVDEAIGLLVDMETGG 389

Query: 1291 CFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGDRSRAL 1470
              P +++YN IL  LCK     +A++V  ++ E GC P+ +TY  ++  +   G R+ A+
Sbjct: 390  FQPTVISYNIILLGLCKTRRVVDAIQVLTEMVEKGCRPNETTYILLIEGIGFAGWRAEAM 449

Query: 1471 MLISEMI-MKGISPD 1512
             L + +  ++ IS D
Sbjct: 450  ELANSVFSLRAISED 464


>ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
            chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  621 bits (1601), Expect = e-175
 Identities = 300/481 (62%), Positives = 387/481 (80%)
 Frame = +1

Query: 223  KSHKNSVFRCSNQIEPNFRNYYRNPERVRVSTDTKPTHLPTYNGFKEAHFVKLLHRSCKA 402
            +S  +S+  C    + + RN       V  S + +  H P  +  ++AH +KLL+RSC+A
Sbjct: 24   QSRSDSIPACRFSNKTHLRN-------VTSSAEFRQPHFPNLDN-RDAHLMKLLNRSCRA 75

Query: 403  GNYDEGLYFLECMVNLGHRADVILCTKLIKGFFNSKCVDKAVKVMRILERYGEPDIFAYN 582
            G ++E LYFLE +V+ G + DV+LCTKLIKGFFNS+ + KA++VM ILE YG+PD+++YN
Sbjct: 76   GKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYGDPDVYSYN 135

Query: 583  AFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKKMLDQLIED 762
            A ISG  K NQIDSANQV   MR+RGFSPDVVTYNIMIGSLC+RGKL+LA +++D+L++D
Sbjct: 136  AMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKD 195

Query: 763  NCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMCREGLMDEA 942
             C+P+VITYTILIEATILEG  NEA++LFDE++ RGL+PD+YTYN IIRG+C+EG+ D A
Sbjct: 196  GCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRA 255

Query: 943  FEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVVTYSILISA 1122
             +FVR L++RGC PDV+SYNILLR+ LN+ +W+DGE+LM +M  + CEPNVVT+SILIS+
Sbjct: 256  LDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISS 315

Query: 1123 LCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYMISSGCFPD 1302
             CR+G++ EA+N+L+VM ++GLTPD+Y+YDPLISA CKEGRLDLAI +L+ M+S GC PD
Sbjct: 316  FCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPD 375

Query: 1303 IVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGDRSRALMLIS 1482
            IVNYNTIL+ LCK G AD AL+VF KL E GCPP V  YNTM SALW+ G++ +AL +IS
Sbjct: 376  IVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMIS 435

Query: 1483 EMIMKGISPDEITYNSLISCLCRDGMVDRAIELLGDMKNSEFLPTVVTYNIVLLGLCKAR 1662
            EMI KGI PDEITYNSLISCLCRDG+VD AI LL DM+ + F PTV+++NIVLLG+CKA 
Sbjct: 436  EMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAH 495

Query: 1663 R 1665
            R
Sbjct: 496  R 496



 Score =  218 bits (554), Expect = 8e-54
 Identities = 112/371 (30%), Positives = 204/371 (54%), Gaps = 1/371 (0%)
 Frame = +1

Query: 394  CKAGNYDEGLYFLECMVNLGHRADVILCTKLIKGFFNSKCVDKAVKVM-RILERYGEPDI 570
            C  G  +     ++ ++  G +  VI  T LI+       +++A+++   ++ R   PD+
Sbjct: 177  CSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDL 236

Query: 571  FAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKKMLDQ 750
            + YNA I G+CK    D A   +  + ARG +PDVV+YNI++ S  N+ + +  ++++  
Sbjct: 237  YTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKD 296

Query: 751  LIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMCREGL 930
            ++   C+P V+T++ILI +   EG   EA+ + + M  +GL PD Y+Y+ +I   C+EG 
Sbjct: 297  MVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGR 356

Query: 931  MDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVVTYSI 1110
            +D A E++  + S GC PD+++YN +L  L   G  D    +  ++    C P V  Y+ 
Sbjct: 357  LDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNT 416

Query: 1111 LISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYMISSG 1290
            + SAL   G   +A+ ++  M+ +G+ PD  TY+ LIS LC++G +D AI  L  M ++ 
Sbjct: 417  MFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATR 476

Query: 1291 CFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGDRSRAL 1470
              P ++++N +L  +CK     E +E+   + E GC P+ ++Y  ++  +   G R+ A+
Sbjct: 477  FQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAM 536

Query: 1471 MLISEMIMKGI 1503
             L + +   G+
Sbjct: 537  ELANSLYRLGV 547


>gb|EPS74045.1| hypothetical protein M569_00706, partial [Genlisea aurea]
          Length = 515

 Score =  604 bits (1557), Expect = e-170
 Identities = 295/443 (66%), Positives = 359/443 (81%), Gaps = 6/443 (1%)
 Frame = +1

Query: 355  FKEAHFVKLLHRSCKAGNYDEGLYFLECMVNLGHRADVILCTKLIKGFFNSKCVDKAVKV 534
            F E  F+KLL RSCK+GNYDEGLYFLE +V+LG RAD +LCTKL+KGF +SK VDKAV+V
Sbjct: 2    FNETRFLKLLKRSCKSGNYDEGLYFLEKLVSLGFRADAVLCTKLVKGFLSSKSVDKAVRV 61

Query: 535  MRILERYGEPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNR 714
            M ILER+GEPD++AYNA I+GLCK  +ID+A  VL++MR RG SPDVVTYNI+IGSLC+R
Sbjct: 62   MGILERHGEPDVYAYNAVINGLCKAGRIDAAKGVLNAMRNRGISPDVVTYNILIGSLCSR 121

Query: 715  GKLDLAKKMLDQLIEDN-CQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYT 891
            GKL  A KMLDQL ED  C+PTV+TYTILIEATI E G   A+K+ ++M  RGL+PDMYT
Sbjct: 122  GKLSSAMKMLDQLTEDRFCRPTVVTYTILIEATIRETGIEGAVKVLEQMSSRGLRPDMYT 181

Query: 892  YNTIIRGMCREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMF 1071
            YNT+IRGMCREGL+ EA EFV SL   G +PDV++YN+LLRA LN+ +WDDGEK++ EMF
Sbjct: 182  YNTVIRGMCREGLVSEASEFVSSLKGSGIEPDVVTYNVLLRAFLNRDEWDDGEKVLSEMF 241

Query: 1072 STECEPNVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLD 1251
            S++C PNVVT+SI++S LCR G L+EAI LLK+M+DEG TPD+YTYDPL+S LC+EGR+D
Sbjct: 242  SSKCRPNVVTFSIIVSHLCRYGLLEEAIGLLKLMIDEGYTPDSYTYDPLVSGLCREGRID 301

Query: 1252 LAISFLDYMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKL--AENGCPPDVSTYNT 1425
             AI  +D+MIS+GC PDIVNYN +LSALCKNG+A EAL VF KL  A      DV TYNT
Sbjct: 302  AAIGLMDHMISNGCLPDIVNYNAVLSALCKNGDAREALRVFRKLEAAAGPAAADVGTYNT 361

Query: 1426 MVSALWNHGDRSRALMLISEMIMKGISPDEITYNSLISCLCRDGMVDRAIELLGDMKNS- 1602
            M+SALWN GD S A  L+ EM+ +G+ PD ITYNS++SCLCR+G VD A+ELLGDM+ S 
Sbjct: 362  MISALWNGGDGSAAAGLVGEMVRRGVDPDGITYNSIVSCLCREGSVDGAMELLGDMRRSG 421

Query: 1603 --EFLPTVVTYNIVLLGLCKARR 1665
              +  P+VVTYN VLLGLCKA R
Sbjct: 422  ARDLRPSVVTYNAVLLGLCKAHR 444



 Score =  211 bits (536), Expect = 1e-51
 Identities = 115/350 (32%), Positives = 190/350 (54%), Gaps = 8/350 (2%)
 Frame = +1

Query: 457  RADVILCTKLIKGFFNSKCVDKAVKVMRILERYG-EPDIFAYNAFISGLCKMNQIDSANQ 633
            R  V+  T LI+       ++ AVKV+  +   G  PD++ YN  I G+C+   +  A++
Sbjct: 141  RPTVVTYTILIEATIRETGIEGAVKVLEQMSSRGLRPDMYTYNTVIRGMCREGLVSEASE 200

Query: 634  VLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKKMLDQLIEDNCQPTVITYTILIEATI 813
             +SS++  G  PDVVTYN+++ +  NR + D  +K+L ++    C+P V+T++I++    
Sbjct: 201  FVSSLKGSGIEPDVVTYNVLLRAFLNRDEWDDGEKVLSEMFSSKCRPNVVTFSIIVSHLC 260

Query: 814  LEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMCREGLMDEAFEFVRSLTSRGCKPDVI 993
              G   EA+ L   M+  G  PD YTY+ ++ G+CREG +D A   +  + S GC PD++
Sbjct: 261  RYGLLEEAIGLLKLMIDEGYTPDSYTYDPLVSGLCREGRIDAAIGLMDHMISNGCLPDIV 320

Query: 994  SYNILLRALLNQGKWDDGEKLM--IEMFSTECEPNVVTYSILISALCRDGQLDEAINLLK 1167
            +YN +L AL   G   +  ++   +E  +     +V TY+ +ISAL   G    A  L+ 
Sbjct: 321  NYNAVLSALCKNGDAREALRVFRKLEAAAGPAAADVGTYNTMISALWNGGDGSAAAGLVG 380

Query: 1168 VMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYMISSGCF---PDIVNYNTILSALC 1338
             M+  G+ PD  TY+ ++S LC+EG +D A+  L  M  SG     P +V YN +L  LC
Sbjct: 381  EMVRRGVDPDGITYNSIVSCLCREGSVDGAMELLGDMRRSGARDLRPSVVTYNAVLLGLC 440

Query: 1339 KNGNADEALEVFGKLAENG--CPPDVSTYNTMVSALWNHGDRSRALMLIS 1482
            K    DEA+EV  ++ E G  C P+ +++  ++  +   G    A+ + S
Sbjct: 441  KAHRMDEAVEVLAEMVEGGGDCEPNETSFVLLIEGIGFSGWPVEAMEIAS 490


>ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355480008|gb|AES61211.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  603 bits (1555), Expect = e-170
 Identities = 294/490 (60%), Positives = 376/490 (76%), Gaps = 10/490 (2%)
 Frame = +1

Query: 226  SHKNSVFRCSNQIEPNFRNYYRNPERVRVST---------DTKPTHLPTYNGFKEAHFVK 378
            S  N++   S+ +  N  N   N  R R +          +TKPT       F++ +F+K
Sbjct: 23   SKPNTIIITSSILFLNEANNNNNKRRRRTNNNEQQQFRVNETKPTKHDQDYDFRDTNFMK 82

Query: 379  LLHRSCKAGNYDEGLYFLECMVNLGHRADVILCTKLIKGFFNSKCVDKAVKVMRILERYG 558
             L+RSCK+  YDE LYFL+ MVN G++ DVILCTKLIKGFFN K ++KA++VM ILE++G
Sbjct: 83   TLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG 142

Query: 559  EPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAKK 738
            +PD+FAYNA ISG CK +++D A++VL  M+ RGF PDVVTYNI+IG+ C RG+LDLA +
Sbjct: 143  KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALR 202

Query: 739  MLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGMC 918
            ++DQL++DNC+PTVITYTILIEATI +GG +EAMKL DEML RGL+PD YTYN ++ GMC
Sbjct: 203  VMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMC 262

Query: 919  REGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNVV 1098
            +EG++D AFEF+  ++  GC   V +YNILLR LLN+GKW+ GEKLM +M    CEPN +
Sbjct: 263  KEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPI 322

Query: 1099 TYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDYM 1278
            TYS LI+ALCRDG++DEA N+LKVM ++ L PD Y+YDPLISALC+EG++DLAI FLD M
Sbjct: 323  TYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDM 382

Query: 1279 ISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGDR 1458
            IS G  PDI++YN+IL++LCKNGNADEAL +F KL E GCPP+  +YNT+  ALW+ GD+
Sbjct: 383  ISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDK 442

Query: 1459 SRALMLISEMIMKGISPDEITYNSLISCLCRDGMVDRAIELLGDMKNSE-FLPTVVTYNI 1635
             RAL +I EM+  GI PDEITYNSLISCLCRDG+VD+AIELL DM  SE   PTV++YN 
Sbjct: 443  IRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNT 502

Query: 1636 VLLGLCKARR 1665
            VLLGLCK +R
Sbjct: 503  VLLGLCKVQR 512



 Score =  226 bits (577), Expect = 2e-56
 Identities = 127/381 (33%), Positives = 202/381 (53%), Gaps = 3/381 (0%)
 Frame = +1

Query: 379  LLHRSCKAGNYDEGLYFLECMVNLGHRADVILCTKLIKGFFNSKCVDKAVKVM-RILERY 555
            L+   C  G  D  L  ++ ++    +  VI  T LI+       +D+A+K++  +L R 
Sbjct: 187  LIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRG 246

Query: 556  GEPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAK 735
              PD + YN  ++G+CK   +D A + LS +   G    V TYNI++  L N GK +  +
Sbjct: 247  LRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGE 306

Query: 736  KMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGM 915
            K++  ++   C+P  ITY+ LI A   +G  +EA  +   M  + L PD Y+Y+ +I  +
Sbjct: 307  KLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISAL 366

Query: 916  CREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNV 1095
            CREG +D A EF+  + S G  PD++SYN +L +L   G  D+   +  ++    C PN 
Sbjct: 367  CREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNA 426

Query: 1096 VTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFL-D 1272
             +Y+ L  AL   G    A+ ++  ML  G+ PD  TY+ LIS LC++G +D AI  L D
Sbjct: 427  GSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVD 486

Query: 1273 YMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHG 1452
               S  C P +++YNT+L  LCK     +A+EV   +   GC P+ +TY  ++  +   G
Sbjct: 487  MFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAG 546

Query: 1453 DRSRALMLISEMI-MKGISPD 1512
             R  A+ L + ++ M  IS D
Sbjct: 547  WRYDAMELANLLVNMDAISED 567


>gb|ESW16008.1| hypothetical protein PHAVU_007G121900g [Phaseolus vulgaris]
          Length = 570

 Score =  595 bits (1534), Expect = e-167
 Identities = 297/505 (58%), Positives = 378/505 (74%), Gaps = 6/505 (1%)
 Frame = +1

Query: 169  SSFLKVSFFTQHNKLSTRKSHKNSVFRCS----NQIEPNFR--NYYRNPERVRVSTDTKP 330
            + FL  +   + N         N+V  C     N+  P+ R  NY +   RV  S+DT+P
Sbjct: 6    TEFLSHTLSLRTNSKGAWHPKPNTVITCRIPVLNEDNPSKRKNNYNKGNGRVS-SSDTRP 64

Query: 331  THLPTYNGFKEAHFVKLLHRSCKAGNYDEGLYFLECMVNLGHRADVILCTKLIKGFFNSK 510
             H      F++ H ++ L+R C+ G Y E LYFLE MV  G++ DVILCTKLIKG F SK
Sbjct: 65   RHYD----FRDTHHMRALNRLCRTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSK 120

Query: 511  CVDKAVKVMRILERYGEPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNI 690
              +KAV+VM ILE++G+PD FAYNA ISG C+ ++ D+AN VL  M+ RGFSPDVVTYNI
Sbjct: 121  KTEKAVQVMEILEQHGDPDAFAYNAVISGFCRSDRFDAANGVLLRMKNRGFSPDVVTYNI 180

Query: 691  MIGSLCNRGKLDLAKKMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRG 870
            +IGSLC RGKLDLA K++DQL++DNC PTVITYTILIEATI+ G  ++AMKL DEM+ RG
Sbjct: 181  LIGSLCARGKLDLAMKVMDQLMKDNCNPTVITYTILIEATIIHGVIDKAMKLLDEMVSRG 240

Query: 871  LQPDMYTYNTIIRGMCREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGE 1050
            LQPDMYTYN I+RGMC+ GL+D AFEFV +L++    P +  YN++L+ LLN+G+W  GE
Sbjct: 241  LQPDMYTYNVIVRGMCKRGLVDRAFEFVCNLSTT---PSLNLYNLVLKGLLNEGRWKTGE 297

Query: 1051 KLMIEMFSTECEPNVVTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISAL 1230
            +LM +M    CEPNVVTYS+LI++LCRDG+  EA++LLKVM ++GL+PD Y YDPLISA 
Sbjct: 298  RLMSDMMVKGCEPNVVTYSVLINSLCRDGKTGEAVDLLKVMKEKGLSPDAYCYDPLISAF 357

Query: 1231 CKEGRLDLAISFLDYMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDV 1410
            CKEG++DLAI F+D M+S+G  PDI+NYNTI+ +LCK G  DEAL +F KL E GCPP+V
Sbjct: 358  CKEGKVDLAIGFVDDMVSAGWLPDIINYNTIMGSLCKKGRGDEALSIFKKLDEVGCPPNV 417

Query: 1411 STYNTMVSALWNHGDRSRALMLISEMIMKGISPDEITYNSLISCLCRDGMVDRAIELLGD 1590
            S+YNTM+ ALW+ GD+ RAL ++ EM+  G+ PD ITYNSLISCLCRDGMVD AI LL D
Sbjct: 418  SSYNTMLGALWSSGDKIRALRMVLEMLNNGLDPDRITYNSLISCLCRDGMVDEAIGLLVD 477

Query: 1591 MKNSEFLPTVVTYNIVLLGLCKARR 1665
            M+ SE+ PTV++YNIVLLGLCKA R
Sbjct: 478  MERSEWQPTVISYNIVLLGLCKAHR 502



 Score =  223 bits (569), Expect = 1e-55
 Identities = 121/380 (31%), Positives = 206/380 (54%), Gaps = 2/380 (0%)
 Frame = +1

Query: 379  LLHRSCKAGNYDEGLYFLECMVNLGHRADVILCTKLIKGFFNSKCVDKAVKVM-RILERY 555
            L+   C  G  D  +  ++ ++       VI  T LI+       +DKA+K++  ++ R 
Sbjct: 181  LIGSLCARGKLDLAMKVMDQLMKDNCNPTVITYTILIEATIIHGVIDKAMKLLDEMVSRG 240

Query: 556  GEPDIFAYNAFISGLCKMNQIDSANQVLSSMRARGFSPDVVTYNIMIGSLCNRGKLDLAK 735
             +PD++ YN  + G+CK   +D A + + ++     +P +  YN+++  L N G+    +
Sbjct: 241  LQPDMYTYNVIVRGMCKRGLVDRAFEFVCNLST---TPSLNLYNLVLKGLLNEGRWKTGE 297

Query: 736  KMLDQLIEDNCQPTVITYTILIEATILEGGTNEAMKLFDEMLLRGLQPDMYTYNTIIRGM 915
            +++  ++   C+P V+TY++LI +   +G T EA+ L   M  +GL PD Y Y+ +I   
Sbjct: 298  RLMSDMMVKGCEPNVVTYSVLINSLCRDGKTGEAVDLLKVMKEKGLSPDAYCYDPLISAF 357

Query: 916  CREGLMDEAFEFVRSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLMIEMFSTECEPNV 1095
            C+EG +D A  FV  + S G  PD+I+YN ++ +L  +G+ D+   +  ++    C PNV
Sbjct: 358  CKEGKVDLAIGFVDDMVSAGWLPDIINYNTIMGSLCKKGRGDEALSIFKKLDEVGCPPNV 417

Query: 1096 VTYSILISALCRDGQLDEAINLLKVMLDEGLTPDTYTYDPLISALCKEGRLDLAISFLDY 1275
             +Y+ ++ AL   G    A+ ++  ML+ GL PD  TY+ LIS LC++G +D AI  L  
Sbjct: 418  SSYNTMLGALWSSGDKIRALRMVLEMLNNGLDPDRITYNSLISCLCRDGMVDEAIGLLVD 477

Query: 1276 MISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTMVSALWNHGD 1455
            M  S   P +++YN +L  LCK     +A+EV   + +NGC P+ +TY  +V  +   G 
Sbjct: 478  MERSEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNQTTYTLLVEGISYAGW 537

Query: 1456 RSRALMLISEM-IMKGISPD 1512
             S A+ L   +  MK IS D
Sbjct: 538  PSDAVELAKSLSSMKAISQD 557