BLASTX nr result
ID: Rehmannia24_contig00000173
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00000173
(379 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001234739.1| chlorophyll a-b binding protein 4, chloropla... 135 6e-30
ref|XP_006363015.1| PREDICTED: chlorophyll a-b binding protein 4... 135 6e-30
gb|AFW90566.1| chlorophyll a/b-binding protein [Solanum tuberosum] 135 6e-30
ref|XP_004982492.1| PREDICTED: chlorophyll a-b binding protein, ... 135 7e-30
gb|AAC28490.1| photosystem II type II chlorophyll a/b binding pr... 135 7e-30
ref|XP_003562323.1| PREDICTED: chlorophyll a-b binding protein, ... 135 7e-30
ref|XP_002466863.1| hypothetical protein SORBIDRAFT_01g015400 [S... 135 7e-30
gb|ACG30954.1| chlorophyll a-b binding protein [Zea mays] 135 7e-30
ref|NP_001148271.1| chlorophyll a-b binding protein [Zea mays] g... 135 7e-30
ref|XP_004234063.1| PREDICTED: chlorophyll a-b binding protein 3... 117 2e-29
gb|AHC95482.1| chlorophyll A/B binding protein [Ziziphus jujuba] 133 2e-29
ref|XP_006836754.1| hypothetical protein AMTR_s00088p00153020 [A... 133 2e-29
gb|EOX93465.1| Photosystem II light harvesting complex gene 2.1 ... 133 2e-29
ref|XP_004144543.1| PREDICTED: chlorophyll a-b binding protein 1... 133 2e-29
sp|P27518.2|CB21_GOSHI RecName: Full=Chlorophyll a-b binding pro... 133 2e-29
ref|XP_002531690.1| chlorophyll A/B binding protein, putative [R... 133 2e-29
gb|ABD92879.1| chloroplast chlorophyll a/b binding protein [Pach... 133 2e-29
gb|ABF70157.1| chlorophyll A-B binding protein (CAB), putative [... 133 2e-29
ref|XP_004233097.1| PREDICTED: chlorophyll a-b binding protein 1... 116 3e-29
emb|CAA52750.1| chlorophyll a/b binding protein [Amaranthus hypo... 133 3e-29
>ref|NP_001234739.1| chlorophyll a-b binding protein 4, chloroplastic [Solanum
lycopersicum] gi|115803|sp|P14278.1|CB24_SOLLC RecName:
Full=Chlorophyll a-b binding protein 4, chloroplastic;
AltName: Full=LHCII type I CAB-4; Short=LHCP; Flags:
Precursor gi|170390|gb|AAA34141.1| chlorophyll
a/b-binding protein precursor [Solanum lycopersicum]
Length = 265
Score = 135 bits (340), Expect = 6e-30
Identities = 62/63 (98%), Positives = 63/63 (100%)
Frame = +1
Query: 1 EGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGL 180
EGGLDYLGNPNL+HAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGL
Sbjct: 140 EGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGL 199
Query: 181 ADD 189
ADD
Sbjct: 200 ADD 202
>ref|XP_006363015.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic-like
[Solanum tuberosum]
Length = 265
Score = 135 bits (340), Expect = 6e-30
Identities = 62/63 (98%), Positives = 63/63 (100%)
Frame = +1
Query: 1 EGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGL 180
EGGLDYLGNPNL+HAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGL
Sbjct: 140 EGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGL 199
Query: 181 ADD 189
ADD
Sbjct: 200 ADD 202
>gb|AFW90566.1| chlorophyll a/b-binding protein [Solanum tuberosum]
Length = 271
Score = 135 bits (340), Expect = 6e-30
Identities = 62/63 (98%), Positives = 63/63 (100%)
Frame = +1
Query: 1 EGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGL 180
EGGLDYLGNPNL+HAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGL
Sbjct: 140 EGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGL 199
Query: 181 ADD 189
ADD
Sbjct: 200 ADD 202
>ref|XP_004982492.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Setaria italica]
Length = 261
Score = 135 bits (339), Expect = 7e-30
Identities = 61/63 (96%), Positives = 63/63 (100%)
Frame = +1
Query: 1 EGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGL 180
EGGLDYLGNPNL+HAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDK+YPGGAFDPLGL
Sbjct: 136 EGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGL 195
Query: 181 ADD 189
ADD
Sbjct: 196 ADD 198
>gb|AAC28490.1| photosystem II type II chlorophyll a/b binding protein [Sorghum
bicolor]
Length = 191
Score = 135 bits (339), Expect = 7e-30
Identities = 61/63 (96%), Positives = 63/63 (100%)
Frame = +1
Query: 1 EGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGL 180
EGGLDYLGNPNL+HAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDK+YPGGAFDPLGL
Sbjct: 66 EGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGL 125
Query: 181 ADD 189
ADD
Sbjct: 126 ADD 128
>ref|XP_003562323.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Brachypodium distachyon]
Length = 263
Score = 135 bits (339), Expect = 7e-30
Identities = 61/63 (96%), Positives = 63/63 (100%)
Frame = +1
Query: 1 EGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGL 180
EGGLDYLGNPNL+HAQSILAIWACQVVLMGF+EGYRVGGGPLGEGLDKIYPGGAFDPLGL
Sbjct: 138 EGGLDYLGNPNLVHAQSILAIWACQVVLMGFIEGYRVGGGPLGEGLDKIYPGGAFDPLGL 197
Query: 181 ADD 189
ADD
Sbjct: 198 ADD 200
>ref|XP_002466863.1| hypothetical protein SORBIDRAFT_01g015400 [Sorghum bicolor]
gi|241920717|gb|EER93861.1| hypothetical protein
SORBIDRAFT_01g015400 [Sorghum bicolor]
Length = 262
Score = 135 bits (339), Expect = 7e-30
Identities = 61/63 (96%), Positives = 63/63 (100%)
Frame = +1
Query: 1 EGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGL 180
EGGLDYLGNPNL+HAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDK+YPGGAFDPLGL
Sbjct: 137 EGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGL 196
Query: 181 ADD 189
ADD
Sbjct: 197 ADD 199
>gb|ACG30954.1| chlorophyll a-b binding protein [Zea mays]
Length = 260
Score = 135 bits (339), Expect = 7e-30
Identities = 61/63 (96%), Positives = 63/63 (100%)
Frame = +1
Query: 1 EGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGL 180
EGGLDYLGNPNL+HAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDK+YPGGAFDPLGL
Sbjct: 135 EGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGL 194
Query: 181 ADD 189
ADD
Sbjct: 195 ADD 197
>ref|NP_001148271.1| chlorophyll a-b binding protein [Zea mays]
gi|195617084|gb|ACG30372.1| chlorophyll a-b binding
protein [Zea mays] gi|238006080|gb|ACR34075.1| unknown
[Zea mays] gi|414871640|tpg|DAA50197.1| TPA: type II
light-harvesting chlorophyll a /b-binding protein
isoform 1 [Zea mays] gi|414871641|tpg|DAA50198.1| TPA:
type II light-harvesting chlorophyll a /b-binding
protein isoform 2 [Zea mays]
gi|414871644|tpg|DAA50201.1| TPA: light harvesting
chlorophyll binding protein9 isoform 1 [Zea mays]
gi|414871645|tpg|DAA50202.1| TPA: light harvesting
chlorophyll binding protein9 isoform 2 [Zea mays]
Length = 260
Score = 135 bits (339), Expect = 7e-30
Identities = 61/63 (96%), Positives = 63/63 (100%)
Frame = +1
Query: 1 EGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGL 180
EGGLDYLGNPNL+HAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDK+YPGGAFDPLGL
Sbjct: 135 EGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGL 194
Query: 181 ADD 189
ADD
Sbjct: 195 ADD 197
>ref|XP_004234063.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 6 [Solanum lycopersicum]
Length = 244
Score = 117 bits (293), Expect(2) = 2e-29
Identities = 52/63 (82%), Positives = 59/63 (93%)
Frame = +1
Query: 1 EGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGL 180
EGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYR+ GGPLGE +D +YPGG+FDPLGL
Sbjct: 142 EGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGL 201
Query: 181 ADD 189
A+D
Sbjct: 202 AED 204
Score = 37.7 bits (86), Expect(2) = 2e-29
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3
Query: 252 DPVANNAWAYATTFVPGK 305
DPV NNAWA+AT FVPGK
Sbjct: 227 DPVNNNAWAFATNFVPGK 244
>gb|AHC95482.1| chlorophyll A/B binding protein [Ziziphus jujuba]
Length = 264
Score = 133 bits (335), Expect = 2e-29
Identities = 62/63 (98%), Positives = 62/63 (98%)
Frame = +1
Query: 1 EGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGL 180
EGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLD IYPGGAFDPLGL
Sbjct: 139 EGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGL 198
Query: 181 ADD 189
ADD
Sbjct: 199 ADD 201
>ref|XP_006836754.1| hypothetical protein AMTR_s00088p00153020 [Amborella trichopoda]
gi|548839314|gb|ERM99607.1| hypothetical protein
AMTR_s00088p00153020 [Amborella trichopoda]
Length = 264
Score = 133 bits (335), Expect = 2e-29
Identities = 62/63 (98%), Positives = 62/63 (98%)
Frame = +1
Query: 1 EGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGL 180
EGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLD IYPGGAFDPLGL
Sbjct: 139 EGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDAIYPGGAFDPLGL 198
Query: 181 ADD 189
ADD
Sbjct: 199 ADD 201
>gb|EOX93465.1| Photosystem II light harvesting complex gene 2.1 [Theobroma cacao]
Length = 265
Score = 133 bits (335), Expect = 2e-29
Identities = 62/63 (98%), Positives = 62/63 (98%)
Frame = +1
Query: 1 EGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGL 180
EGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLD IYPGGAFDPLGL
Sbjct: 140 EGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGL 199
Query: 181 ADD 189
ADD
Sbjct: 200 ADD 202
>ref|XP_004144543.1| PREDICTED: chlorophyll a-b binding protein 151, chloroplastic-like
[Cucumis sativus] gi|449511798|ref|XP_004164056.1|
PREDICTED: chlorophyll a-b binding protein 151,
chloroplastic-like [Cucumis sativus]
Length = 265
Score = 133 bits (335), Expect = 2e-29
Identities = 62/63 (98%), Positives = 62/63 (98%)
Frame = +1
Query: 1 EGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGL 180
EGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLD IYPGGAFDPLGL
Sbjct: 140 EGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGL 199
Query: 181 ADD 189
ADD
Sbjct: 200 ADD 202
>sp|P27518.2|CB21_GOSHI RecName: Full=Chlorophyll a-b binding protein 151, chloroplastic;
AltName: Full=LHCII type II CAB-151; Short=LHCP; Flags:
Precursor gi|452314|emb|CAA38025.1| chlorophyll ab
binding protein [Gossypium hirsutum]
Length = 265
Score = 133 bits (335), Expect = 2e-29
Identities = 62/63 (98%), Positives = 62/63 (98%)
Frame = +1
Query: 1 EGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGL 180
EGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLD IYPGGAFDPLGL
Sbjct: 140 EGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGL 199
Query: 181 ADD 189
ADD
Sbjct: 200 ADD 202
>ref|XP_002531690.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223528666|gb|EEF30681.1| chlorophyll A/B binding
protein, putative [Ricinus communis]
Length = 265
Score = 133 bits (335), Expect = 2e-29
Identities = 62/63 (98%), Positives = 62/63 (98%)
Frame = +1
Query: 1 EGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGL 180
EGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLD IYPGGAFDPLGL
Sbjct: 140 EGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGL 199
Query: 181 ADD 189
ADD
Sbjct: 200 ADD 202
>gb|ABD92879.1| chloroplast chlorophyll a/b binding protein [Pachysandra
terminalis]
Length = 264
Score = 133 bits (335), Expect = 2e-29
Identities = 61/63 (96%), Positives = 62/63 (98%)
Frame = +1
Query: 1 EGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGL 180
EGGLDYLGNPNLIHAQSILAIWACQVVLMGF+EGYRVGGGPLGEGLD IYPGGAFDPLGL
Sbjct: 139 EGGLDYLGNPNLIHAQSILAIWACQVVLMGFIEGYRVGGGPLGEGLDSIYPGGAFDPLGL 198
Query: 181 ADD 189
ADD
Sbjct: 199 ADD 201
>gb|ABF70157.1| chlorophyll A-B binding protein (CAB), putative [Musa acuminata]
Length = 264
Score = 133 bits (335), Expect = 2e-29
Identities = 62/63 (98%), Positives = 62/63 (98%)
Frame = +1
Query: 1 EGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGL 180
EGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLD IYPGGAFDPLGL
Sbjct: 139 EGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDAIYPGGAFDPLGL 198
Query: 181 ADD 189
ADD
Sbjct: 199 ADD 201
>ref|XP_004233097.1| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
isoform 2 [Solanum lycopersicum]
Length = 222
Score = 116 bits (291), Expect(2) = 3e-29
Identities = 52/62 (83%), Positives = 58/62 (93%)
Frame = +1
Query: 1 EGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGL 180
EGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYR+ GGPLGE +D +YPGG+FDPLGL
Sbjct: 140 EGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGL 199
Query: 181 AD 186
AD
Sbjct: 200 AD 201
Score = 37.7 bits (86), Expect(2) = 3e-29
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3
Query: 252 DPVANNAWAYATTFVPGK 305
DPV NNAWA+AT FVPGK
Sbjct: 205 DPVNNNAWAFATNFVPGK 222
>emb|CAA52750.1| chlorophyll a/b binding protein [Amaranthus hypochondriacus]
Length = 264
Score = 133 bits (334), Expect = 3e-29
Identities = 61/63 (96%), Positives = 62/63 (98%)
Frame = +1
Query: 1 EGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGL 180
EGGLDYLGNPNLIHAQSILAIWACQVVLMG +EGYRVGGGPLGEGLDKIYPGGAFDPLGL
Sbjct: 139 EGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDKIYPGGAFDPLGL 198
Query: 181 ADD 189
ADD
Sbjct: 199 ADD 201