BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00000009
         (608 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX19935.1| coat protein [Nandina mosaic virus]                    352   3e-95
dbj|BAG12127.1| coat protein [Plantago asiatica mosaic virus] gi...   347   1e-93
dbj|BAG12157.1| coat protein [Plantago asiatica mosaic virus]         344   1e-92
dbj|BAG12142.1| coat protein [Plantago asiatica mosaic virus]         344   1e-92
gb|AGW45385.1| coat protein [Plantago asiatica mosaic virus]          339   4e-91
ref|NP_620840.1| capsid protein [Plantago asiatica mosaic virus]...   338   7e-91
ref|NP_702992.1| coat protein [Tulip virus X] gi|23491558|dbj|BA...   304   1e-80
gb|ACE62921.1| coat protein [Tulip virus X]                           303   2e-80
gb|AAW30636.1| coat protein [Tulip virus X]                           239   3e-61
ref|NP_042699.1| coat protein [Cassava common mosaic virus] gi|7...   204   1e-50
ref|YP_224088.1| coat protein [Hydrangea ringspot virus] gi|5679...   182   6e-44
gb|ADE10206.1| coat protein [Hydrangea ringspot virus]                180   2e-43
dbj|BAA00373.1| 28.1K protein [Clover yellow mosaic virus]            162   7e-38
ref|YP_004849318.1| coat protein [Tamus red mosaic virus] gi|345...   162   9e-38
ref|NP_077083.1| coat protein [Clover yellow mosaic virus] gi|11...   159   6e-37
ref|YP_054406.1| coat protein [Zygocactus virus X] gi|38146351|g...   157   2e-36
ref|YP_002647031.1| coat protein [Allium virus X] gi|224579239|g...   155   1e-35
gb|AFU63340.1| coat protein [Alternanthera mosaic virus]              152   5e-35
gb|AAO85393.1| capsid protein [Cactus virus X]                        151   1e-34
gb|AFB81318.1| coat protein [Alternanthera mosaic virus]              151   2e-34

>gb|AAX19935.1| coat protein [Nandina mosaic virus]
          Length = 207

 Score =  352 bits (904), Expect = 3e-95
 Identities = 175/189 (92%), Positives = 183/189 (96%)
 Frame = +1

Query: 31  MALNKAPTTDALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 210
           MAL  APTTDALAAMTFQVSSPSVPTA EL TI++GLTT+G+P DGLLSHALAVVNACFD
Sbjct: 1   MALTAAPTTDALAAMTFQVSSPSVPTASELNTITQGLTTIGVPTDGLLSHALAVVNACFD 60

Query: 211 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFAR 390
           AGSS FVTLSGPSPTATISLAQ+AGVIKVTTTLRKFCR+YAKIIWNARLARNLPPAGFAR
Sbjct: 61  AGSSTFVTLSGPSPTATISLAQIAGVIKVTTTLRKFCRFYAKIIWNARLARNLPPAGFAR 120

Query: 391 ANIKFEHRWAGFDFFDGLLNPAALEPLGGISRTPTPDEVTANETARSLNLFEARANSSNL 570
           ANIKFEHRWAGFDFFDGLLNPAALEPLGG+SRTPTPDEVTANETARSLNLFEARANSSNL
Sbjct: 121 ANIKFEHRWAGFDFFDGLLNPAALEPLGGLSRTPTPDEVTANETARSLNLFEARANSSNL 180

Query: 571 ASTSTQFTQ 597
           ASTSTQFT+
Sbjct: 181 ASTSTQFTR 189


>dbj|BAG12127.1| coat protein [Plantago asiatica mosaic virus]
           gi|169219481|dbj|BAG12132.1| coat protein [Plantago
           asiatica mosaic virus] gi|169219487|dbj|BAG12137.1| coat
           protein [Plantago asiatica mosaic virus]
           gi|169219499|dbj|BAG12147.1| coat protein [Plantago
           asiatica mosaic virus] gi|169219505|dbj|BAG12152.1| coat
           protein [Plantago asiatica mosaic virus]
          Length = 207

 Score =  347 bits (890), Expect = 1e-93
 Identities = 171/189 (90%), Positives = 185/189 (97%)
 Frame = +1

Query: 31  MALNKAPTTDALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 210
           MALN+APT+DAL AMTF VSSPSVPTAEEL TI++GLTTLG+PAD LLSHALAVVNACFD
Sbjct: 1   MALNQAPTSDALNAMTFAVSSPSVPTAEELATITQGLTTLGVPADSLLSHALAVVNACFD 60

Query: 211 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFAR 390
           AGSSAFVTLSGPSPTATISLAQ+AGV+KVTTTLRKFCR+YAKIIWNARL+RNLPPAGFAR
Sbjct: 61  AGSSAFVTLSGPSPTATISLAQIAGVVKVTTTLRKFCRFYAKIIWNARLSRNLPPAGFAR 120

Query: 391 ANIKFEHRWAGFDFFDGLLNPAALEPLGGISRTPTPDEVTANETARSLNLFEARANSSNL 570
           ANIKFEHRWAGFDFFDGLLNPAALEP+GG++RTPTPDEVTANETARSLNLFEARA+SSNL
Sbjct: 121 ANIKFEHRWAGFDFFDGLLNPAALEPIGGLTRTPTPDEVTANETARSLNLFEARASSSNL 180

Query: 571 ASTSTQFTQ 597
           ASTSTQFT+
Sbjct: 181 ASTSTQFTR 189


>dbj|BAG12157.1| coat protein [Plantago asiatica mosaic virus]
          Length = 207

 Score =  344 bits (882), Expect = 1e-92
 Identities = 169/189 (89%), Positives = 184/189 (97%)
 Frame = +1

Query: 31  MALNKAPTTDALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 210
           MALN+APT+DAL AMTF VSSPSVPTA EL TI++GLTTLG+PAD LLSHALAVVNACFD
Sbjct: 1   MALNQAPTSDALNAMTFDVSSPSVPTAAELATITQGLTTLGVPADSLLSHALAVVNACFD 60

Query: 211 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFAR 390
           AGSSAFVTLSGPSPTATISLAQ+AGV+KVTTTLRKFCR+YAKIIWNARL+RNLPPAGFAR
Sbjct: 61  AGSSAFVTLSGPSPTATISLAQIAGVVKVTTTLRKFCRFYAKIIWNARLSRNLPPAGFAR 120

Query: 391 ANIKFEHRWAGFDFFDGLLNPAALEPLGGISRTPTPDEVTANETARSLNLFEARANSSNL 570
           ANIKFEHRWAGFDFFDGLLNPAALEP+GG++RTPTPDEVTANETARSLNLFEARA++SNL
Sbjct: 121 ANIKFEHRWAGFDFFDGLLNPAALEPIGGLTRTPTPDEVTANETARSLNLFEARASNSNL 180

Query: 571 ASTSTQFTQ 597
           ASTSTQFT+
Sbjct: 181 ASTSTQFTR 189


>dbj|BAG12142.1| coat protein [Plantago asiatica mosaic virus]
          Length = 207

 Score =  344 bits (882), Expect = 1e-92
 Identities = 170/189 (89%), Positives = 184/189 (97%)
 Frame = +1

Query: 31  MALNKAPTTDALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 210
           MALN+APT+DAL AMTF VSSPSVPTAEEL TI++GLTTLG+PAD LLSHALAVVNACFD
Sbjct: 1   MALNQAPTSDALNAMTFAVSSPSVPTAEELATITQGLTTLGVPADSLLSHALAVVNACFD 60

Query: 211 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFAR 390
           AGSSAFVTLSGPSPTATISLAQ+AGV+KVTTTLRKFCR+YAKIIWNARL+RNLPPAGFAR
Sbjct: 61  AGSSAFVTLSGPSPTATISLAQIAGVVKVTTTLRKFCRFYAKIIWNARLSRNLPPAGFAR 120

Query: 391 ANIKFEHRWAGFDFFDGLLNPAALEPLGGISRTPTPDEVTANETARSLNLFEARANSSNL 570
           ANIKFEHRWAGFD FDGLLNPAALEP+GG++RTPTPDEVTANETARSLNLFEARA+SSNL
Sbjct: 121 ANIKFEHRWAGFDSFDGLLNPAALEPIGGLTRTPTPDEVTANETARSLNLFEARASSSNL 180

Query: 571 ASTSTQFTQ 597
           ASTSTQFT+
Sbjct: 181 ASTSTQFTR 189


>gb|AGW45385.1| coat protein [Plantago asiatica mosaic virus]
          Length = 207

 Score =  339 bits (869), Expect = 4e-91
 Identities = 166/189 (87%), Positives = 183/189 (96%)
 Frame = +1

Query: 31  MALNKAPTTDALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 210
           MALN+AP+ DAL AMTF VSSPSVPTA EL+TI++GLTTLG+PA+ LLSHAL+VVNACFD
Sbjct: 1   MALNQAPSPDALDAMTFAVSSPSVPTAAELDTITRGLTTLGVPAEALLSHALSVVNACFD 60

Query: 211 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFAR 390
           AGSSAFVTLSGPSPTATISLAQ+AGV+KVTTTLRKFCR+YAK IWNARL+RNLPPAGFAR
Sbjct: 61  AGSSAFVTLSGPSPTATISLAQIAGVVKVTTTLRKFCRFYAKTIWNARLSRNLPPAGFAR 120

Query: 391 ANIKFEHRWAGFDFFDGLLNPAALEPLGGISRTPTPDEVTANETARSLNLFEARANSSNL 570
           ANIKFEHRWAGFDFFDGLLNPAALEPLGG++RTPTPDEVTANETARSLNLFEARA++SNL
Sbjct: 121 ANIKFEHRWAGFDFFDGLLNPAALEPLGGLTRTPTPDEVTANETARSLNLFEARASTSNL 180

Query: 571 ASTSTQFTQ 597
           ASTSTQFT+
Sbjct: 181 ASTSTQFTR 189


>ref|NP_620840.1| capsid protein [Plantago asiatica mosaic virus]
           gi|1168989|sp|Q07506.1|COAT_P1AMV RecName: Full=Coat
           protein; AltName: Full=Capsid protein; Short=CP
           gi|311649|emb|CAA79765.1| capsid protein [Plantago
           asiatica mosaic virus]
          Length = 207

 Score =  338 bits (867), Expect = 7e-91
 Identities = 167/189 (88%), Positives = 179/189 (94%)
 Frame = +1

Query: 31  MALNKAPTTDALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 210
           MALN APT DALAAM F VSSPSVPTA+EL+TI+ GLTTLG+P D LLSHALA+VNACFD
Sbjct: 1   MALNTAPTADALAAMAFPVSSPSVPTAQELDTITSGLTTLGVPTDSLLSHALALVNACFD 60

Query: 211 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFAR 390
           AGSS+FVTLSGPSPT TISLAQ+AGV+KVTTTLRKFCR+YAKIIWNARLARNLPPAGFAR
Sbjct: 61  AGSSSFVTLSGPSPTPTISLAQIAGVVKVTTTLRKFCRFYAKIIWNARLARNLPPAGFAR 120

Query: 391 ANIKFEHRWAGFDFFDGLLNPAALEPLGGISRTPTPDEVTANETARSLNLFEARANSSNL 570
           ANIKFEHRWAGFDFFDGLLNPAALEP GG+SRTPTPDEVTANETARSLNLFEARA+ SNL
Sbjct: 121 ANIKFEHRWAGFDFFDGLLNPAALEPPGGLSRTPTPDEVTANETARSLNLFEARASYSNL 180

Query: 571 ASTSTQFTQ 597
           ASTSTQFT+
Sbjct: 181 ASTSTQFTR 189


>ref|NP_702992.1| coat protein [Tulip virus X] gi|23491558|dbj|BAC16789.1| coat
           protein [Tulip virus X]
          Length = 207

 Score =  304 bits (779), Expect = 1e-80
 Identities = 146/189 (77%), Positives = 171/189 (90%)
 Frame = +1

Query: 31  MALNKAPTTDALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 210
           MALN AP  +ALAAMT +VSSP+VPT  EL+TI+ GLTTLG+PAD L+SHALA+VNACFD
Sbjct: 1   MALNTAPNPEALAAMTLEVSSPAVPTPAELDTIAAGLTTLGVPADSLISHALALVNACFD 60

Query: 211 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFAR 390
           AGSS F T+SGPSPT TI+LAQ+AGV+KV+TTLRKFCR+YAK+IWNARL+RN PPAGFAR
Sbjct: 61  AGSSQFTTISGPSPTPTITLAQLAGVVKVSTTLRKFCRFYAKLIWNARLSRNRPPAGFAR 120

Query: 391 ANIKFEHRWAGFDFFDGLLNPAALEPLGGISRTPTPDEVTANETARSLNLFEARANSSNL 570
           A +K   +WAGFDFFDGLLNPAALEPLGG++R PTPDE+TANETARSL LFE+RANS+NL
Sbjct: 121 AYVKTGQKWAGFDFFDGLLNPAALEPLGGLTREPTPDEITANETARSLGLFESRANSNNL 180

Query: 571 ASTSTQFTQ 597
           A+TSTQFT+
Sbjct: 181 ATTSTQFTR 189


>gb|ACE62921.1| coat protein [Tulip virus X]
          Length = 207

 Score =  303 bits (776), Expect = 2e-80
 Identities = 146/189 (77%), Positives = 171/189 (90%)
 Frame = +1

Query: 31  MALNKAPTTDALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFD 210
           MALN APT +ALAAMT  VSSP+VPT  ELETI+ GLTTLG+P D L+SHALA+VNACFD
Sbjct: 1   MALNTAPTPEALAAMTLAVSSPAVPTPLELETITAGLTTLGVPTDSLISHALALVNACFD 60

Query: 211 AGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFAR 390
           AGSS F TLSGPSPT+TI+LAQ+AGV+KV+TTLRKFCR+YAK+IWNARL+RN PPAGFAR
Sbjct: 61  AGSSQFTTLSGPSPTSTITLAQIAGVVKVSTTLRKFCRFYAKLIWNARLSRNQPPAGFAR 120

Query: 391 ANIKFEHRWAGFDFFDGLLNPAALEPLGGISRTPTPDEVTANETARSLNLFEARANSSNL 570
           A +K   +WAGFDFFDGLLNPAALEPLGG++R PTPDE+TANETARSL LFE+RANS++L
Sbjct: 121 AYVKTGQKWAGFDFFDGLLNPAALEPLGGLTREPTPDEITANETARSLGLFESRANSNSL 180

Query: 571 ASTSTQFTQ 597
           A+T+TQFT+
Sbjct: 181 ATTATQFTR 189


>gb|AAW30636.1| coat protein [Tulip virus X]
          Length = 157

 Score =  239 bits (611), Expect = 3e-61
 Identities = 112/139 (80%), Positives = 130/139 (93%)
 Frame = +1

Query: 181 ALAVVNACFDAGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKIIWNARLA 360
           ALA+VNACFDAGSS F TLSGPSPT  ++LAQ+AGV+KV+TTLRKFCR+YAK+IWNARL+
Sbjct: 1   ALALVNACFDAGSSQFTTLSGPSPTPAVTLAQIAGVVKVSTTLRKFCRFYAKLIWNARLS 60

Query: 361 RNLPPAGFARANIKFEHRWAGFDFFDGLLNPAALEPLGGISRTPTPDEVTANETARSLNL 540
           RNLPPAGFARA +K  H+WAGFDFFDGLLNPAALEPLGG++R PTPDE+TANETARSL L
Sbjct: 61  RNLPPAGFARAYVKTGHKWAGFDFFDGLLNPAALEPLGGLTREPTPDEITANETARSLGL 120

Query: 541 FEARANSSNLASTSTQFTQ 597
           FE+RANS+NLA+TSTQFT+
Sbjct: 121 FESRANSNNLATTSTQFTR 139


>ref|NP_042699.1| coat protein [Cassava common mosaic virus] gi|773409|gb|AAC54779.1|
           coat protein [Cassava common mosaic virus]
           gi|1587827|prf||2207297E ORF 5
          Length = 229

 Score =  204 bits (520), Expect = 1e-50
 Identities = 101/188 (53%), Positives = 136/188 (72%)
 Frame = +1

Query: 34  ALNKAPTTDALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFDA 213
           AL+ APT + L+ +  + +S  V +A+ L  I+    +L +P   L+ HAL +VN CFD+
Sbjct: 24  ALSTAPTDEELSRLDLKPASNLVASADALSAIAADWASLKVPTAQLMRHALDLVNFCFDS 83

Query: 214 GSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFARA 393
           GSS + T+ G SPT TI  A +AG ++  TTLR+FCRYYAKIIWNAR+  N+PPAG+A A
Sbjct: 84  GSSKYTTVEGSSPTPTIPRAALAGAVRKHTTLRQFCRYYAKIIWNARVKANIPPAGYANA 143

Query: 394 NIKFEHRWAGFDFFDGLLNPAALEPLGGISRTPTPDEVTANETARSLNLFEARANSSNLA 573
           +IK E  +AGFDFFDG++N AALEP GG+ R PTP E+ A ETARSLNLFEA++  +NLA
Sbjct: 144 HIKPEQAFAGFDFFDGVMNVAALEPSGGLVREPTPQEIIAAETARSLNLFEAQSKGNNLA 203

Query: 574 STSTQFTQ 597
           + +TQ T+
Sbjct: 204 TNATQVTR 211


>ref|YP_224088.1| coat protein [Hydrangea ringspot virus] gi|56792009|gb|AAW30452.1|
           coat protein [Hydrangea ringspot virus]
          Length = 225

 Score =  182 bits (462), Expect = 6e-44
 Identities = 97/192 (50%), Positives = 126/192 (65%), Gaps = 1/192 (0%)
 Frame = +1

Query: 25  STMALNKAPTT-DALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNA 201
           ST +   AP + + L  ++F V+S  VP+  EL  I+   TTLG+PA     HALA+VN 
Sbjct: 17  STPSAAFAPLSQEVLETLSFPVTSNLVPSPTELAAIADAWTTLGVPAAETTKHALALVNF 76

Query: 202 CFDAGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAG 381
           CFD+GSSA    +G SPT TI L+ +AG +     +RKFCRY+A+ IWNARL  N PPA 
Sbjct: 77  CFDSGSSATTRFTGASPTPTIPLSALAGAVLELVPIRKFCRYFAQYIWNARLTANAPPAS 136

Query: 382 FARANIKFEHRWAGFDFFDGLLNPAALEPLGGISRTPTPDEVTANETARSLNLFEARANS 561
           +   N     ++AGFDFFDG+LN A+L+P  G+ R PT  E  AN TA+SL+LFEA    
Sbjct: 137 WEAWNFPENEKFAGFDFFDGVLNTASLKPPQGLVRKPTEAERVANATAKSLHLFEAATQR 196

Query: 562 SNLASTSTQFTQ 597
           SNLAST+TQFT+
Sbjct: 197 SNLASTATQFTR 208


>gb|ADE10206.1| coat protein [Hydrangea ringspot virus]
          Length = 225

 Score =  180 bits (457), Expect = 2e-43
 Identities = 96/192 (50%), Positives = 125/192 (65%), Gaps = 1/192 (0%)
 Frame = +1

Query: 25  STMALNKAPTT-DALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNA 201
           ST +   AP + + L  ++F V+S  VP+  EL  I+   TTLG+PA     HALA+VN 
Sbjct: 17  STPSAAFAPLSQEVLETLSFPVTSNLVPSPTELAAIADAWTTLGVPAAETTKHALALVNF 76

Query: 202 CFDAGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAG 381
           CFD+GSSA    +G SPT  I L+ +AG +     +RKFCRY+A+ IWNARL  N PPA 
Sbjct: 77  CFDSGSSATTRFTGASPTPAIPLSALAGAVLELVPIRKFCRYFAQYIWNARLTANAPPAS 136

Query: 382 FARANIKFEHRWAGFDFFDGLLNPAALEPLGGISRTPTPDEVTANETARSLNLFEARANS 561
           +   N     ++AGFDFFDG+LN A+L+P  G+ R PT  E  AN TA+SL+LFEA    
Sbjct: 137 WEAWNFPENEKFAGFDFFDGVLNTASLKPPQGLVRKPTEAERVANATAKSLHLFEAATQR 196

Query: 562 SNLASTSTQFTQ 597
           SNLAST+TQFT+
Sbjct: 197 SNLASTATQFTR 208


>dbj|BAA00373.1| 28.1K protein [Clover yellow mosaic virus]
          Length = 257

 Score =  162 bits (410), Expect = 7e-38
 Identities = 84/199 (42%), Positives = 125/199 (62%)
 Frame = +1

Query: 1   NSRNFKTYSTMALNKAPTTDALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSH 180
           NS+   T +   L  APT + L  +T  + S  VP+  ELE I+K   TLG+      ++
Sbjct: 41  NSKTNMTDTKKTLFSAPTDEQLDTLTLTIESNLVPSISELEAIAKDWKTLGLQEADFTAN 100

Query: 181 ALAVVNACFDAGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKIIWNARLA 360
           A+ +   C+ +GSS  V + G S +  I L Q+AGV++  +TLR+FCRY+AK+IWN  L 
Sbjct: 101 AIKIAWFCYHSGSSESVQVQGNSTSDKIPLYQLAGVVRQHSTLRRFCRYFAKVIWNYALR 160

Query: 361 RNLPPAGFARANIKFEHRWAGFDFFDGLLNPAALEPLGGISRTPTPDEVTANETARSLNL 540
           +N PPA +A  N K   R+A FDFF+G+ + AAL P GG+ R P+P+E  ANET ++++L
Sbjct: 161 KNQPPANWASQNYKEADRFAAFDFFEGVSSSAALSPPGGLIREPSPNERMANETNKNVHL 220

Query: 541 FEARANSSNLASTSTQFTQ 597
           ++  +  SNLA+TST  T+
Sbjct: 221 YQTASRGSNLATTSTVATK 239


>ref|YP_004849318.1| coat protein [Tamus red mosaic virus] gi|345548101|gb|AEO12144.1|
           coat protein [Tamus red mosaic virus]
          Length = 221

 Score =  162 bits (409), Expect = 9e-38
 Identities = 80/185 (43%), Positives = 115/185 (62%)
 Frame = +1

Query: 43  KAPTTDALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFDAGSS 222
           KAPT D L  MTF V+S  +P+ EE + IS+    LGI  D L  +A+ +   C+ +GSS
Sbjct: 20  KAPTLDRLKLMTFDVNSTLLPSTEEFKLISEDWAKLGISGDSLTENAMKLATFCYHSGSS 79

Query: 223 AFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFARANIK 402
               + G S    +SL+++AGV+ + T+LRKFCRY+A +IWN  +   +PPA +   + K
Sbjct: 80  TTTEMRGESSKPGVSLSRLAGVVNMHTSLRKFCRYFAPLIWNIHVESKIPPAAWQSKDFK 139

Query: 403 FEHRWAGFDFFDGLLNPAALEPLGGISRTPTPDEVTANETARSLNLFEARANSSNLASTS 582
              ++A FDFFDG+ N  +++P GG+ R PT  E  AN TAR+L LFEA A  + +AS S
Sbjct: 140 EGEKFAAFDFFDGVENVGSIKPPGGLIRKPTDKERIANATARALKLFEAAAQQNRMASNS 199

Query: 583 TQFTQ 597
             +TQ
Sbjct: 200 VHYTQ 204


>ref|NP_077083.1| coat protein [Clover yellow mosaic virus]
           gi|116740|sp|P16486.1|COAT_CYMV RecName: Full=Coat
           protein; AltName: Full=Capsid protein; Short=CP
           gi|221222|dbj|BAA00375.1| coat protein [Clover yellow
           mosaic virus]
          Length = 212

 Score =  159 bits (402), Expect = 6e-37
 Identities = 82/193 (42%), Positives = 122/193 (63%)
 Frame = +1

Query: 19  TYSTMALNKAPTTDALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVN 198
           T +   L  APT + L  +T  + S  VP+  ELE I+K   TLG+      ++A+ +  
Sbjct: 2   TDTKKTLFSAPTDEQLDTLTLTIESNLVPSISELEAIAKDWKTLGLQEADFTANAIKIAW 61

Query: 199 ACFDAGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPA 378
            C+ +GSS  V + G S +  I L Q+AGV++  +TLR+FCRY+AK+IWN  L +N PPA
Sbjct: 62  FCYHSGSSESVQVQGNSTSDKIPLYQLAGVVRQHSTLRRFCRYFAKVIWNYALRKNQPPA 121

Query: 379 GFARANIKFEHRWAGFDFFDGLLNPAALEPLGGISRTPTPDEVTANETARSLNLFEARAN 558
            +A  N K   R+A FDFF+G+ + AAL P GG+ R P+P+E  ANET ++++L++  + 
Sbjct: 122 NWASQNYKEADRFAAFDFFEGVSSSAALSPPGGLIREPSPNERMANETNKNVHLYQTASR 181

Query: 559 SSNLASTSTQFTQ 597
            SNLA+TST  T+
Sbjct: 182 GSNLATTSTVATK 194


>ref|YP_054406.1| coat protein [Zygocactus virus X] gi|38146351|gb|AAR11546.1| coat
           protein [Zygocactus virus X]
          Length = 226

 Score =  157 bits (397), Expect = 2e-36
 Identities = 85/182 (46%), Positives = 113/182 (62%)
 Frame = +1

Query: 52  TTDALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFDAGSSAFV 231
           T   LAA+T  V+S  +P+ EEL  +S  LT LG  +  +   AL VVN CFD GSS   
Sbjct: 28  TAAQLAALTLGVTSSLLPSPEELVQLSNALTALGASSSNVSQVALEVVNYCFDNGSSPET 87

Query: 232 TLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFARANIKFEH 411
              G S    I L++VA  I   TTLR+FCRY+AK+IWN R++RNLPPA +     K E 
Sbjct: 88  VFKGNSNLLQIPLSKVAQAITQVTTLRQFCRYFAKLIWNYRVSRNLPPAAWEAWAYKPEQ 147

Query: 412 RWAGFDFFDGLLNPAALEPLGGISRTPTPDEVTANETARSLNLFEARANSSNLASTSTQF 591
           ++A FDFFDG+LN AAL+P  G+ R P   E  AN+T R+++LFE+ A  S + +TS   
Sbjct: 148 KFAAFDFFDGVLNEAALQPTDGLVRLPNEAERLANQTNRNVHLFESNAQKSRVLTTSALV 207

Query: 592 TQ 597
           T+
Sbjct: 208 TK 209


>ref|YP_002647031.1| coat protein [Allium virus X] gi|224579239|gb|ACN58198.1| coat
           protein [Allium virus X]
          Length = 225

 Score =  155 bits (391), Expect = 1e-35
 Identities = 81/204 (39%), Positives = 122/204 (59%), Gaps = 10/204 (4%)
 Frame = +1

Query: 16  KTYSTMALNKA----------PTTDALAAMTFQVSSPSVPTAEELETISKGLTTLGIPAD 165
           KT +T  L+KA          P  + L+AMTF +++ S+PT  EL  I++   TLG+P +
Sbjct: 4   KTAATNVLSKAVNSNAIPFTTPKPEELSAMTFTLNNRSLPTPGELIAIAEQWKTLGVPGE 63

Query: 166 GLLSHALAVVNACFDAGSSAFVTLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKIIW 345
            + +HAL +   C+ +GSS    ++G S T  ++LAQ+AGV+   TTLRKFCR++A ++W
Sbjct: 64  AVTTHALQLTMFCYHSGSSPNTEITGDSATPKVTLAQLAGVVMQHTTLRKFCRFFAPLVW 123

Query: 346 NARLARNLPPAGFARANIKFEHRWAGFDFFDGLLNPAALEPLGGISRTPTPDEVTANETA 525
           N  L   +PPA +   N   + ++A FDFFDG+ N  ++ P  G+ R PTP E+ A+ TA
Sbjct: 124 NWALDHKIPPASWQANNFPPDEKYAAFDFFDGVTNGGSMLPADGLRRQPTPKELIAHATA 183

Query: 526 RSLNLFEARANSSNLASTSTQFTQ 597
           +S N+F A  N    AST    T+
Sbjct: 184 QSTNIFTASQNQLQTASTHLLHTK 207


>gb|AFU63340.1| coat protein [Alternanthera mosaic virus]
          Length = 207

 Score =  152 bits (385), Expect = 5e-35
 Identities = 81/183 (44%), Positives = 117/183 (63%), Gaps = 1/183 (0%)
 Frame = +1

Query: 52  TTDALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFDAGSSAFV 231
           T + + A T   +S  +P+ E+L TI+  L    +PA    + AL +VN C+D GSSA+ 
Sbjct: 9   TQEQMNAFTPHATSNLLPSPEQLTTIASLLVAAKVPAASTTTIALELVNFCYDNGSSAYT 68

Query: 232 TLSGPSPTATISLAQVAGVIKVT-TTLRKFCRYYAKIIWNARLARNLPPAGFARANIKFE 408
            + GPS  A +SL+QVA ++K + T+LRKFCR++A IIWN R  + +PPA +     K  
Sbjct: 69  AVVGPSSLAEVSLSQVANIVKASGTSLRKFCRFFAPIIWNLRTDK-MPPANWEANGFKPT 127

Query: 409 HRWAGFDFFDGLLNPAALEPLGGISRTPTPDEVTANETARSLNLFEARANSSNLASTSTQ 588
            ++A FDFFDG+ NPAA++P GG+ RTP+  E  AN T + +NLF+A A  +NLAS S  
Sbjct: 128 EKFAAFDFFDGVENPAAMQPPGGLVRTPSQAERIANATNKQVNLFQAAAQDNNLASNSAF 187

Query: 589 FTQ 597
            T+
Sbjct: 188 ITK 190


>gb|AAO85393.1| capsid protein [Cactus virus X]
          Length = 225

 Score =  151 bits (382), Expect = 1e-34
 Identities = 80/182 (43%), Positives = 113/182 (62%)
 Frame = +1

Query: 52  TTDALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFDAGSSAFV 231
           ++  LAA++  V+S  +P+  EL +IS+ LTTLG  A  L   +L +VN CFD GSS   
Sbjct: 27  SSSQLAALSLGVTSSLLPSPAELVSISQALTTLGASATNLTPLSLEIVNYCFDNGSSPET 86

Query: 232 TLSGPSPTATISLAQVAGVIKVTTTLRKFCRYYAKIIWNARLARNLPPAGFARANIKFEH 411
              G S    + L++VA  I   TTLR+FCRY+AKIIWN R+++NLPPA +     K E 
Sbjct: 87  VFKGDSAVLQMPLSKVAHAITQFTTLRQFCRYFAKIIWNYRISKNLPPAAWEAWAYKPEQ 146

Query: 412 RWAGFDFFDGLLNPAALEPLGGISRTPTPDEVTANETARSLNLFEARANSSNLASTSTQF 591
           ++A FDFFDG+LN AAL P+ G+ R P   E  AN+T  +++ FE+ A  +   +TS   
Sbjct: 147 KFAAFDFFDGVLNEAALNPIDGLGRVPNEAERLANQTNCNVHFFESNAQKNRALTTSALV 206

Query: 592 TQ 597
           T+
Sbjct: 207 TK 208


>gb|AFB81318.1| coat protein [Alternanthera mosaic virus]
          Length = 207

 Score =  151 bits (381), Expect = 2e-34
 Identities = 80/183 (43%), Positives = 116/183 (63%), Gaps = 1/183 (0%)
 Frame = +1

Query: 52  TTDALAAMTFQVSSPSVPTAEELETISKGLTTLGIPADGLLSHALAVVNACFDAGSSAFV 231
           T + + A T   +S  +P+ E+L TI+  L    +PA    + AL +VN C+D GSS + 
Sbjct: 9   TQEQMNAFTPHATSNLLPSPEQLTTIASLLVAAKVPAASTTTIALELVNFCYDNGSSTYT 68

Query: 232 TLSGPSPTATISLAQVAGVIKVT-TTLRKFCRYYAKIIWNARLARNLPPAGFARANIKFE 408
            + GPS  A +SL+QVA ++K + T+LRKFCR++A IIWN R  + +PPA +     K  
Sbjct: 69  AVVGPSSLAEVSLSQVANIVKASGTSLRKFCRFFAPIIWNLRTDK-MPPANWEANGFKPT 127

Query: 409 HRWAGFDFFDGLLNPAALEPLGGISRTPTPDEVTANETARSLNLFEARANSSNLASTSTQ 588
            ++A FDFFDG+ NPAA++P GG+ RTP+  E  AN T + +NLF+A A  +NLAS S  
Sbjct: 128 EKFAAFDFFDGVENPAAMQPPGGLVRTPSQAERIANATNKQVNLFQAAAQDNNLASNSAF 187

Query: 589 FTQ 597
            T+
Sbjct: 188 ITK 190