BLASTX nr result
ID: Rehmannia23_contig00032949
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00032949
(460 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ08043.1| hypothetical protein PRUPE_ppa027064mg [Prunus pe... 78 1e-12
gb|EPS61714.1| hypothetical protein M569_13079, partial [Genlise... 74 3e-11
ref|XP_004231861.1| PREDICTED: U1 small nuclear ribonucleoprotei... 70 4e-10
emb|CBI21383.3| unnamed protein product [Vitis vinifera] 67 2e-09
ref|XP_002283118.1| PREDICTED: uncharacterized protein LOC100247... 67 2e-09
emb|CAN64038.1| hypothetical protein VITISV_021557 [Vitis vinifera] 67 2e-09
gb|EXB54173.1| RNA-binding protein with multiple splicing 2 [Mor... 67 2e-09
ref|XP_006339867.1| PREDICTED: U1 small nuclear ribonucleoprotei... 67 3e-09
ref|XP_006339866.1| PREDICTED: U1 small nuclear ribonucleoprotei... 67 3e-09
gb|EOX91506.1| RNA-binding family protein isoform 3 [Theobroma c... 65 7e-09
gb|EOX91505.1| RNA-binding family protein isoform 2, partial [Th... 65 7e-09
gb|EOX91504.1| RNA-binding family protein isoform 1 [Theobroma c... 65 7e-09
ref|XP_004288011.1| PREDICTED: U1 small nuclear ribonucleoprotei... 64 3e-08
ref|XP_004169849.1| PREDICTED: U2 small nuclear ribonucleoprotei... 64 3e-08
ref|XP_006494470.1| PREDICTED: U1 small nuclear ribonucleoprotei... 63 4e-08
ref|XP_006425958.1| hypothetical protein CICLE_v10026071mg [Citr... 62 6e-08
ref|XP_006425957.1| hypothetical protein CICLE_v10026071mg [Citr... 62 6e-08
ref|XP_002310126.1| hypothetical protein POPTR_0007s10740g [Popu... 62 6e-08
dbj|BAJ53198.1| JHL03K20.7 [Jatropha curcas] 62 1e-07
ref|XP_002879975.1| hypothetical protein ARALYDRAFT_903572 [Arab... 62 1e-07
>gb|EMJ08043.1| hypothetical protein PRUPE_ppa027064mg [Prunus persica]
Length = 328
Score = 77.8 bits (190), Expect = 1e-12
Identities = 45/97 (46%), Positives = 51/97 (52%), Gaps = 22/97 (22%)
Frame = -2
Query: 456 MDGLTAYFTSP------IHLPYYQSXXXXPETAHVNPNSS-----PTFPQ---------- 340
MD + AY+ P +H PYYQ V P P FPQ
Sbjct: 1 MDDMAAYYPPPPPPPGSVHYPYYQQPPPPQPPPSVAPPLQHHLVQPYFPQHPPPFSSYAP 60
Query: 339 -IYPQSSHDQVRTLFVAGLPEDVKPREVCNLFHEFPG 232
+ PQ SHD+VRTLFVAGLPEDVKPRE+ NLF EFPG
Sbjct: 61 ALVPQPSHDEVRTLFVAGLPEDVKPREIYNLFREFPG 97
>gb|EPS61714.1| hypothetical protein M569_13079, partial [Genlisea aurea]
Length = 304
Score = 73.6 bits (179), Expect = 3e-11
Identities = 41/82 (50%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
Frame = -2
Query: 453 DGLTAYFTSPIHLPYYQSXXXXPETAHVNPNS--------SPTFPQIYPQSSHDQVRTLF 298
D LT+++ PIH PYY AH P S P SS D VRTLF
Sbjct: 1 DDLTSFYAPPIHHPYYHPNPPAD--AHTPPTSLLQPIHAHQPHILAFATHSSQDHVRTLF 58
Query: 297 VAGLPEDVKPREVCNLFHEFPG 232
VAGLPEDVKPRE+ NLF EFPG
Sbjct: 59 VAGLPEDVKPREIYNLFREFPG 80
>ref|XP_004231861.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Solanum
lycopersicum]
Length = 308
Score = 69.7 bits (169), Expect = 4e-10
Identities = 30/41 (73%), Positives = 34/41 (82%)
Frame = -2
Query: 354 PTFPQIYPQSSHDQVRTLFVAGLPEDVKPREVCNLFHEFPG 232
P+ P +YPQ SHD VRTLF+AGLPEDVKPRE+ NLF EF G
Sbjct: 47 PSAPPLYPQDSHDDVRTLFIAGLPEDVKPREIYNLFREFAG 87
>emb|CBI21383.3| unnamed protein product [Vitis vinifera]
Length = 333
Score = 67.4 bits (163), Expect = 2e-09
Identities = 29/38 (76%), Positives = 34/38 (89%)
Frame = -2
Query: 345 PQIYPQSSHDQVRTLFVAGLPEDVKPREVCNLFHEFPG 232
P +YPQ+S D+VRTLF+AGLPEDVKPRE+ NLF EFPG
Sbjct: 66 PPLYPQTSVDEVRTLFIAGLPEDVKPREIYNLFREFPG 103
>ref|XP_002283118.1| PREDICTED: uncharacterized protein LOC100247532 [Vitis vinifera]
Length = 336
Score = 67.4 bits (163), Expect = 2e-09
Identities = 29/38 (76%), Positives = 34/38 (89%)
Frame = -2
Query: 345 PQIYPQSSHDQVRTLFVAGLPEDVKPREVCNLFHEFPG 232
P +YPQ+S D+VRTLF+AGLPEDVKPRE+ NLF EFPG
Sbjct: 69 PPLYPQTSVDEVRTLFIAGLPEDVKPREIYNLFREFPG 106
>emb|CAN64038.1| hypothetical protein VITISV_021557 [Vitis vinifera]
Length = 335
Score = 67.4 bits (163), Expect = 2e-09
Identities = 29/38 (76%), Positives = 34/38 (89%)
Frame = -2
Query: 345 PQIYPQSSHDQVRTLFVAGLPEDVKPREVCNLFHEFPG 232
P +YPQ+S D+VRTLF+AGLPEDVKPRE+ NLF EFPG
Sbjct: 66 PPLYPQTSVDEVRTLFIAGLPEDVKPREIYNLFREFPG 103
>gb|EXB54173.1| RNA-binding protein with multiple splicing 2 [Morus notabilis]
Length = 322
Score = 67.0 bits (162), Expect = 2e-09
Identities = 42/96 (43%), Positives = 48/96 (50%), Gaps = 21/96 (21%)
Frame = -2
Query: 456 MDGLTAYFTSPI------HLPYYQSXXXXPETAHV------------NPNSSPT---FPQ 340
MD + AY+ P H PYYQ P A +P P P
Sbjct: 1 MDDMAAYYPPPPPLPAVPHYPYYQPPPPPPAAAAPPAAHQLAQPYAPHPQQPPYGAYTPS 60
Query: 339 IYPQSSHDQVRTLFVAGLPEDVKPREVCNLFHEFPG 232
+ SHD+VRTLFVAGLPEDVKPRE+ NLF EFPG
Sbjct: 61 LVAPCSHDEVRTLFVAGLPEDVKPREIYNLFREFPG 96
>ref|XP_006339867.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform X2
[Solanum tuberosum]
Length = 315
Score = 66.6 bits (161), Expect = 3e-09
Identities = 29/41 (70%), Positives = 33/41 (80%)
Frame = -2
Query: 354 PTFPQIYPQSSHDQVRTLFVAGLPEDVKPREVCNLFHEFPG 232
P+ P +YPQ SH VRTLF+AGLPEDVKPRE+ NLF EF G
Sbjct: 54 PSAPLLYPQDSHGDVRTLFIAGLPEDVKPREIYNLFREFAG 94
>ref|XP_006339866.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform X1
[Solanum tuberosum]
Length = 316
Score = 66.6 bits (161), Expect = 3e-09
Identities = 29/41 (70%), Positives = 33/41 (80%)
Frame = -2
Query: 354 PTFPQIYPQSSHDQVRTLFVAGLPEDVKPREVCNLFHEFPG 232
P+ P +YPQ SH VRTLF+AGLPEDVKPRE+ NLF EF G
Sbjct: 54 PSAPLLYPQDSHGDVRTLFIAGLPEDVKPREIYNLFREFAG 94
>gb|EOX91506.1| RNA-binding family protein isoform 3 [Theobroma cacao]
Length = 233
Score = 65.5 bits (158), Expect = 7e-09
Identities = 40/107 (37%), Positives = 49/107 (45%), Gaps = 32/107 (29%)
Frame = -2
Query: 456 MDGLTAYFTSPI-----HLPYYQSXXXXPETAHVNPNSSP-------------------- 352
MD + AY+ P H PYYQ+ P + P P
Sbjct: 1 MDDMAAYYPPPSGLLPPHYPYYQNPPPPPPPPALAPPPPPPPGATGPLPHPHSYIPQQQP 60
Query: 351 -------TFPQIYPQSSHDQVRTLFVAGLPEDVKPREVCNLFHEFPG 232
+ P + SSHD VRTLF+AGLPED+KPRE+ NLF EFPG
Sbjct: 61 PPLFPCYSVPYVSACSSHDSVRTLFIAGLPEDIKPREIYNLFREFPG 107
>gb|EOX91505.1| RNA-binding family protein isoform 2, partial [Theobroma cacao]
Length = 243
Score = 65.5 bits (158), Expect = 7e-09
Identities = 40/107 (37%), Positives = 49/107 (45%), Gaps = 32/107 (29%)
Frame = -2
Query: 456 MDGLTAYFTSPI-----HLPYYQSXXXXPETAHVNPNSSP-------------------- 352
MD + AY+ P H PYYQ+ P + P P
Sbjct: 1 MDDMAAYYPPPSGLLPPHYPYYQNPPPPPPPPALAPPPPPPPGATGPLPHPHSYIPQQQP 60
Query: 351 -------TFPQIYPQSSHDQVRTLFVAGLPEDVKPREVCNLFHEFPG 232
+ P + SSHD VRTLF+AGLPED+KPRE+ NLF EFPG
Sbjct: 61 PPLFPCYSVPYVSACSSHDSVRTLFIAGLPEDIKPREIYNLFREFPG 107
>gb|EOX91504.1| RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 327
Score = 65.5 bits (158), Expect = 7e-09
Identities = 40/107 (37%), Positives = 49/107 (45%), Gaps = 32/107 (29%)
Frame = -2
Query: 456 MDGLTAYFTSPI-----HLPYYQSXXXXPETAHVNPNSSP-------------------- 352
MD + AY+ P H PYYQ+ P + P P
Sbjct: 1 MDDMAAYYPPPSGLLPPHYPYYQNPPPPPPPPALAPPPPPPPGATGPLPHPHSYIPQQQP 60
Query: 351 -------TFPQIYPQSSHDQVRTLFVAGLPEDVKPREVCNLFHEFPG 232
+ P + SSHD VRTLF+AGLPED+KPRE+ NLF EFPG
Sbjct: 61 PPLFPCYSVPYVSACSSHDSVRTLFIAGLPEDIKPREIYNLFREFPG 107
>ref|XP_004288011.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Fragaria
vesca subsp. vesca]
Length = 327
Score = 63.5 bits (153), Expect = 3e-08
Identities = 40/96 (41%), Positives = 48/96 (50%), Gaps = 21/96 (21%)
Frame = -2
Query: 456 MDGLTAYFTSP------IHLPYYQSXXXXPET------------AHVNPNSSPTFPQIYP 331
MD + AY+ P +H YY P A+ P P P P
Sbjct: 1 MDDMAAYYPPPPPPPGSVHYSYYHQPPPQPPPPVAPPPPHHLVQAYYPPQPPPYAPYAAP 60
Query: 330 ---QSSHDQVRTLFVAGLPEDVKPREVCNLFHEFPG 232
QS++D+VRTLFVAGLPEDVK RE+ NLF EFPG
Sbjct: 61 LVAQSAYDEVRTLFVAGLPEDVKAREIYNLFREFPG 96
>ref|XP_004169849.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like, partial
[Cucumis sativus]
Length = 306
Score = 63.5 bits (153), Expect = 3e-08
Identities = 37/93 (39%), Positives = 49/93 (52%), Gaps = 18/93 (19%)
Frame = -2
Query: 456 MDGLTAYFT-----------SPIHLPYYQSXXXXPE-------TAHVNPNSSPTFPQIYP 331
MD +T+Y+ P H PYYQ + H + +S P +
Sbjct: 1 MDDMTSYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPSTFASYALPLLPH 60
Query: 330 QSSHDQVRTLFVAGLPEDVKPREVCNLFHEFPG 232
+S ++VRTLF+AGLPEDVKPRE+ NLF EFPG
Sbjct: 61 TTSINEVRTLFIAGLPEDVKPREIYNLFREFPG 93
>ref|XP_006494470.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Citrus
sinensis]
Length = 326
Score = 63.2 bits (152), Expect = 4e-08
Identities = 40/94 (42%), Positives = 48/94 (51%), Gaps = 22/94 (23%)
Frame = -2
Query: 447 LTAYFTSP--IHLPYYQSXXXXPETAH------VNPNSSPTFPQIYPQ------------ 328
+ Y+ P +H YYQ+ P V P + P PQ PQ
Sbjct: 1 MAEYYPPPAGLHYGYYQTPPPPPPPPPPPPGGVVAPPTQPYMPQPQPQPPPLGSYSASFP 60
Query: 327 --SSHDQVRTLFVAGLPEDVKPREVCNLFHEFPG 232
S+D+VRTLFVAGLPEDVKPRE+ NLF EFPG
Sbjct: 61 AYGSYDEVRTLFVAGLPEDVKPREIYNLFREFPG 94
>ref|XP_006425958.1| hypothetical protein CICLE_v10026071mg [Citrus clementina]
gi|557527948|gb|ESR39198.1| hypothetical protein
CICLE_v10026071mg [Citrus clementina]
Length = 326
Score = 62.4 bits (150), Expect = 6e-08
Identities = 39/90 (43%), Positives = 47/90 (52%), Gaps = 18/90 (20%)
Frame = -2
Query: 447 LTAYFTSP--IHLPYYQSXXXXPETAH----VNPNSSPTFPQIYPQ------------SS 322
+ Y+ P +H YYQ+ P V P + P PQ P S
Sbjct: 1 MAEYYPPPAGLHYGYYQTPPPPPPPPPPGGVVAPPTQPYMPQPQPPPLGSYSASFPAYGS 60
Query: 321 HDQVRTLFVAGLPEDVKPREVCNLFHEFPG 232
+D+VRTLFVAGLPEDVKPRE+ NLF EFPG
Sbjct: 61 YDEVRTLFVAGLPEDVKPREIYNLFREFPG 90
>ref|XP_006425957.1| hypothetical protein CICLE_v10026071mg [Citrus clementina]
gi|557527947|gb|ESR39197.1| hypothetical protein
CICLE_v10026071mg [Citrus clementina]
Length = 322
Score = 62.4 bits (150), Expect = 6e-08
Identities = 39/90 (43%), Positives = 47/90 (52%), Gaps = 18/90 (20%)
Frame = -2
Query: 447 LTAYFTSP--IHLPYYQSXXXXPETAH----VNPNSSPTFPQIYPQ------------SS 322
+ Y+ P +H YYQ+ P V P + P PQ P S
Sbjct: 1 MAEYYPPPAGLHYGYYQTPPPPPPPPPPGGVVAPPTQPYMPQPQPPPLGSYSASFPAYGS 60
Query: 321 HDQVRTLFVAGLPEDVKPREVCNLFHEFPG 232
+D+VRTLFVAGLPEDVKPRE+ NLF EFPG
Sbjct: 61 YDEVRTLFVAGLPEDVKPREIYNLFREFPG 90
>ref|XP_002310126.1| hypothetical protein POPTR_0007s10740g [Populus trichocarpa]
gi|222853029|gb|EEE90576.1| hypothetical protein
POPTR_0007s10740g [Populus trichocarpa]
Length = 323
Score = 62.4 bits (150), Expect = 6e-08
Identities = 33/67 (49%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = -2
Query: 426 PIHLPYYQSXXXXPETAHVNPNSSP--TFPQIYPQSSHDQVRTLFVAGLPEDVKPREVCN 253
P HLPY H P +P ++ + HDQVRTLFVAGLP+D+KPRE+ N
Sbjct: 41 PHHLPYIP---------HPQPPPAPFVSYVSVPAYVPHDQVRTLFVAGLPDDIKPREMYN 91
Query: 252 LFHEFPG 232
LF EFPG
Sbjct: 92 LFREFPG 98
>dbj|BAJ53198.1| JHL03K20.7 [Jatropha curcas]
Length = 316
Score = 61.6 bits (148), Expect = 1e-07
Identities = 27/38 (71%), Positives = 30/38 (78%)
Frame = -2
Query: 345 PQIYPQSSHDQVRTLFVAGLPEDVKPREVCNLFHEFPG 232
P P + HD VRTLFVAGLP+DVKPRE+ NLF EFPG
Sbjct: 64 PSYAPHAPHDPVRTLFVAGLPDDVKPREIYNLFREFPG 101
>ref|XP_002879975.1| hypothetical protein ARALYDRAFT_903572 [Arabidopsis lyrata subsp.
lyrata] gi|297325814|gb|EFH56234.1| hypothetical protein
ARALYDRAFT_903572 [Arabidopsis lyrata subsp. lyrata]
Length = 289
Score = 61.6 bits (148), Expect = 1e-07
Identities = 35/74 (47%), Positives = 41/74 (55%)
Frame = -2
Query: 453 DGLTAYFTSPIHLPYYQSXXXXPETAHVNPNSSPTFPQIYPQSSHDQVRTLFVAGLPEDV 274
D L AY+ P +P Q + PT I + D+VRTLFVAGLPEDV
Sbjct: 3 DYLAAYYNLPAIVPPPQPGVAPIPITSAHSVFLPTHVSI---GARDEVRTLFVAGLPEDV 59
Query: 273 KPREVCNLFHEFPG 232
KPRE+ NLF EFPG
Sbjct: 60 KPREIYNLFREFPG 73