BLASTX nr result
ID: Rehmannia23_contig00032887
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00032887
(325 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptas... 39 3e-08
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo... 36 1e-07
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ... 36 1e-07
gb|AAP53315.2| retrotransposon protein, putative, unclassified [... 36 1e-07
gb|EEC67895.1| hypothetical protein OsI_35569 [Oryza sativa Indi... 35 6e-07
gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japo... 35 8e-07
ref|XP_004293032.1| PREDICTED: uncharacterized protein LOC101314... 46 2e-06
>gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 653
Score = 38.5 bits (88), Expect(3) = 3e-08
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = +3
Query: 3 LFFRANVEECLRIQSCLDLYAKASGQVISFQKSSI 107
LFFRAN E ++ LD YA AS Q+I+ QKS I
Sbjct: 279 LFFRANENETRALKDILDTYANASDQLINMQKSEI 313
Score = 36.2 bits (82), Expect(3) = 3e-08
Identities = 20/43 (46%), Positives = 25/43 (58%)
Frame = +2
Query: 110 FSVNTNMEDCNAICQQLNVSYTTNHRFYLGLPSLVGRSKKNRF 238
FS N + N + L VS R YLGLPS++GRSKK+ F
Sbjct: 315 FSRNVPVTKKNTLSNMLWVSEGIGIRKYLGLPSMIGRSKKSIF 357
Score = 28.1 bits (61), Expect(3) = 3e-08
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1
Query: 226 KKQIFAFIKDRVWSR 270
KK IF +IKDR+W+R
Sbjct: 353 KKSIFNYIKDRIWNR 367
>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
Length = 1594
Score = 35.8 bits (81), Expect(4) = 1e-07
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +2
Query: 107 LFSVNTNMEDCNAICQQLNVSYTTNHRFYLGLPSLVGRSKKNRF 238
+FS NT+ + A+ LN+ T + YLGLP VGRS+ F
Sbjct: 951 MFSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIF 994
Score = 30.8 bits (68), Expect(4) = 1e-07
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +3
Query: 12 RANVEECLRIQSCLDLYAKASGQVISFQKSSI 107
RAN E ++Q+ L +Y + SGQVI+ KS++
Sbjct: 919 RANGGEAQQLQTILQIYEECSGQVINKDKSAV 950
Score = 28.9 bits (63), Expect(4) = 1e-07
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3
Query: 270 KSKLLSRASKEVLLKTVA 323
K KLLSRA KE+L+K VA
Sbjct: 1009 KEKLLSRAGKEILIKAVA 1026
Score = 23.5 bits (49), Expect(4) = 1e-07
Identities = 6/15 (40%), Positives = 13/15 (86%)
Frame = +1
Query: 226 KKQIFAFIKDRVWSR 270
+ +IF+++K+R+W R
Sbjct: 990 RTKIFSYLKERIWQR 1004
>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1509
Score = 35.8 bits (81), Expect(4) = 1e-07
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +2
Query: 107 LFSVNTNMEDCNAICQQLNVSYTTNHRFYLGLPSLVGRSKKNRF 238
+FS NT+ + A+ LN+ T + YLGLP VGRS+ F
Sbjct: 923 MFSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIF 966
Score = 30.8 bits (68), Expect(4) = 1e-07
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +3
Query: 12 RANVEECLRIQSCLDLYAKASGQVISFQKSSI 107
RAN E ++Q+ L +Y + SGQVI+ KS++
Sbjct: 891 RANGGEAQQLQTILQIYEECSGQVINKDKSAV 922
Score = 28.9 bits (63), Expect(4) = 1e-07
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3
Query: 270 KSKLLSRASKEVLLKTVA 323
K KLLSRA KE+L+K VA
Sbjct: 981 KEKLLSRAGKEILIKAVA 998
Score = 23.5 bits (49), Expect(4) = 1e-07
Identities = 6/15 (40%), Positives = 13/15 (86%)
Frame = +1
Query: 226 KKQIFAFIKDRVWSR 270
+ +IF+++K+R+W R
Sbjct: 962 RTKIFSYLKERIWQR 976
>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1505
Score = 35.8 bits (81), Expect(4) = 1e-07
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +2
Query: 107 LFSVNTNMEDCNAICQQLNVSYTTNHRFYLGLPSLVGRSKKNRF 238
+FS NT+ + A+ LN+ T + YLGLP VGRS+ F
Sbjct: 919 MFSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIF 962
Score = 30.8 bits (68), Expect(4) = 1e-07
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +3
Query: 12 RANVEECLRIQSCLDLYAKASGQVISFQKSSI 107
RAN E ++Q+ L +Y + SGQVI+ KS++
Sbjct: 887 RANGGEAQQLQTILQIYEECSGQVINKDKSAV 918
Score = 28.9 bits (63), Expect(4) = 1e-07
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3
Query: 270 KSKLLSRASKEVLLKTVA 323
K KLLSRA KE+L+K VA
Sbjct: 977 KEKLLSRAGKEILIKAVA 994
Score = 23.5 bits (49), Expect(4) = 1e-07
Identities = 6/15 (40%), Positives = 13/15 (86%)
Frame = +1
Query: 226 KKQIFAFIKDRVWSR 270
+ +IF+++K+R+W R
Sbjct: 958 RTKIFSYLKERIWQR 972
>gb|EEC67895.1| hypothetical protein OsI_35569 [Oryza sativa Indica Group]
Length = 724
Score = 35.4 bits (80), Expect(4) = 6e-07
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +2
Query: 107 LFSVNTNMEDCNAICQQLNVSYTTNHRFYLGLPSLVGRSKKNRF 238
+FS NT E + Q L ++ T + YLGLP VGR K F
Sbjct: 239 MFSSNTGSEKRREVMQTLQINKQTMNERYLGLPVFVGRDKTKVF 282
Score = 28.1 bits (61), Expect(4) = 6e-07
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3
Query: 270 KSKLLSRASKEVLLKTVA 323
K K+LSRA KE+L+K VA
Sbjct: 297 KEKMLSRAGKEILIKAVA 314
Score = 26.9 bits (58), Expect(4) = 6e-07
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = +1
Query: 226 KKQIFAFIKDRVWSR 270
K ++FA++KDR+W R
Sbjct: 278 KTKVFAYLKDRIWKR 292
Score = 26.2 bits (56), Expect(4) = 6e-07
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 12 RANVEECLRIQSCLDLYAKASGQVISFQKSSI 107
RAN + +Q+ L LY + SGQ+I +K +I
Sbjct: 207 RANRGDAQNLQNILTLYEEFSGQMIDKEKFAI 238
>gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japonica Group]
Length = 662
Score = 35.4 bits (80), Expect(4) = 8e-07
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +2
Query: 107 LFSVNTNMEDCNAICQQLNVSYTTNHRFYLGLPSLVGRSKKNRF 238
+FS NT E + Q L ++ T + YLGLP VGR K F
Sbjct: 409 MFSSNTGSEKRREVMQTLQINKQTMNERYLGLPVFVGRDKTKVF 452
Score = 28.1 bits (61), Expect(4) = 8e-07
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3
Query: 270 KSKLLSRASKEVLLKTVA 323
K K+LSRA KE+L+K VA
Sbjct: 467 KEKMLSRAGKEILIKAVA 484
Score = 26.9 bits (58), Expect(4) = 8e-07
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = +1
Query: 226 KKQIFAFIKDRVWSR 270
K ++FA++KDR+W R
Sbjct: 448 KTKVFAYLKDRIWKR 462
Score = 25.8 bits (55), Expect(4) = 8e-07
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 12 RANVEECLRIQSCLDLYAKASGQVISFQKSSI 107
RAN + +Q+ L LY + SGQ+++ +K +I
Sbjct: 377 RANRGDAQNLQNILTLYEEFSGQMLNKEKFAI 408
>ref|XP_004293032.1| PREDICTED: uncharacterized protein LOC101314917 [Fragaria vesca
subsp. vesca]
Length = 344
Score = 46.2 bits (108), Expect(2) = 2e-06
Identities = 20/36 (55%), Positives = 29/36 (80%)
Frame = +3
Query: 3 LFFRANVEECLRIQSCLDLYAKASGQVISFQKSSIS 110
+FF+A EEC R+Q+ L +Y +ASGQ +SF+KSSI+
Sbjct: 228 IFFKAEGEECQRVQNMLRIYEEASGQKVSFEKSSIA 263
Score = 31.2 bits (69), Expect(2) = 2e-06
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +2
Query: 110 FSVNTNMEDCNAICQQLNVSYTTNHRFYLGLPSLVGRSKKNRF 238
FS N ME+ + L V H YLGLP+ V SK+ F
Sbjct: 264 FSKNVVMEEQIELAAVLGVERVDKHERYLGLPTEVSYSKREAF 306