BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00032786
         (879 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containi...   433   e-119
ref|XP_004240655.1| PREDICTED: pentatricopeptide repeat-containi...   422   e-116
ref|XP_002328557.1| predicted protein [Populus trichocarpa]           414   e-113
gb|EMJ12484.1| hypothetical protein PRUPE_ppa002699mg [Prunus pe...   413   e-113
ref|XP_006362625.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   408   e-111
ref|XP_006601432.1| PREDICTED: putative pentatricopeptide repeat...   406   e-111
gb|EPS64459.1| hypothetical protein M569_10321 [Genlisea aurea]       405   e-111
ref|XP_006301886.1| hypothetical protein CARUB_v10022358mg [Caps...   404   e-110
ref|NP_177601.1| pentatricopeptide repeat-containing protein [Ar...   404   e-110
dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana] gi|6...   404   e-110
gb|EOY21836.1| Tetratricopeptide repeat (TPR)-like superfamily p...   399   e-109
ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arab...   399   e-109
gb|EXB44682.1| hypothetical protein L484_015939 [Morus notabilis]     395   e-107
ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containi...   395   e-107
ref|XP_006390406.1| hypothetical protein EUTSA_v10018254mg [Eutr...   394   e-107
ref|XP_004301149.1| PREDICTED: pentatricopeptide repeat-containi...   384   e-104
gb|ESW27309.1| hypothetical protein PHAVU_003G190600g [Phaseolus...   378   e-102
ref|XP_003609069.1| Pentatricopeptide repeat protein [Medicago t...   316   8e-84
ref|XP_002511576.1| pentatricopeptide repeat-containing protein,...   293   7e-77
gb|EOY33313.1| Tetratricopeptide repeat (TPR)-like superfamily p...   280   7e-73

>ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74630-like
            [Vitis vinifera]
          Length = 643

 Score =  433 bits (1113), Expect = e-119
 Identities = 206/290 (71%), Positives = 245/290 (84%)
 Frame = +2

Query: 5    FRCGDVKGAERVFNLMPAKNLASYNLMLAGYMKLGEFELARKVFEEMPMRDEVSWSTMIT 184
            FRCGDVKGA+ +FN MP +NL S+N+MLAGY K GE ELARK+F EMP++D+VSWSTMI 
Sbjct: 183  FRCGDVKGADMMFNRMPFRNLTSWNVMLAGYTKAGELELARKLFLEMPVKDDVSWSTMIV 242

Query: 185  GLAQDGCFNEAFEYFRKLHVVGMRPNEVSLTGVLSACAHSGALEFAKILHGFIEKVGLLW 364
            G A +G F EAF +FR+L  VGMRPNEVSLTG LSACA +GA+EF KILHGFIEK G LW
Sbjct: 243  GFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKSGFLW 302

Query: 365  ITPVNNALIDTYSKCGNVDMARLVFQRMPGKKSIVSWTSMIVGLAMQGYGEEALSLFNEM 544
            +  VNNAL+DTYSKCGNV MARLVF+RMP K+SIVSWTSMI GLAM GYGEEA+ LF+EM
Sbjct: 303  MVSVNNALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEM 362

Query: 545  EQTGTIPDGVSVIAILYACSHAGLVEQGRQVFDKITKVYLIKPEIEHYGCMVDLYGRAGQ 724
            E++G  PDG++ I+ILYACSHAGL+E+G + F K+  +Y I+P IEHYGCMVDLYGRAGQ
Sbjct: 363  EESGIRPDGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQ 422

Query: 725  LLKAYDFITQMPIPPNAVIWRTLLGACSFYGDLKLAEQVKKRLSELDPKN 874
            L KAY+FI  MP+ P A+IWRTLLGACS +G++KLAE+VK+RLSELDP N
Sbjct: 423  LDKAYEFIIHMPVLPTAIIWRTLLGACSIHGNVKLAERVKERLSELDPNN 472


>ref|XP_004240655.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74630-like
            [Solanum lycopersicum]
          Length = 525

 Score =  422 bits (1086), Expect = e-116
 Identities = 197/291 (67%), Positives = 242/291 (83%)
 Frame = +2

Query: 2    FFRCGDVKGAERVFNLMPAKNLASYNLMLAGYMKLGEFELARKVFEEMPMRDEVSWSTMI 181
            + R  DV GA++VF LMP +NL ++N+MLAGY K GE E A ++F +MP RD++SWSTMI
Sbjct: 182  YLRGSDVSGADKVFGLMPFRNLTTWNVMLAGYTKAGELERAERLFLQMPSRDDISWSTMI 241

Query: 182  TGLAQDGCFNEAFEYFRKLHVVGMRPNEVSLTGVLSACAHSGALEFAKILHGFIEKVGLL 361
             G + +GCF+EA   FR+L     +PNEVSLTG LSACA +GA +F  +LH +IEKVGL+
Sbjct: 242  VGFSHNGCFDEAIRVFRELVGSESKPNEVSLTGALSACAQAGAFKFGMVLHAYIEKVGLV 301

Query: 362  WITPVNNALIDTYSKCGNVDMARLVFQRMPGKKSIVSWTSMIVGLAMQGYGEEALSLFNE 541
            WIT VNNAL+DTYSKCGNV MARLVF+RM GKK+IVSWTSMI G A QGYGEE +  F+E
Sbjct: 302  WITSVNNALLDTYSKCGNVLMARLVFERMLGKKTIVSWTSMIAGFATQGYGEEVIKYFHE 361

Query: 542  MEQTGTIPDGVSVIAILYACSHAGLVEQGRQVFDKITKVYLIKPEIEHYGCMVDLYGRAG 721
            ME++GT PDGV+ I++LYACSHAGLVEQG ++F K+T++Y I+P IEHYGCMVDLYGRAG
Sbjct: 362  MEESGTRPDGVTFISVLYACSHAGLVEQGHELFSKMTEIYDIEPTIEHYGCMVDLYGRAG 421

Query: 722  QLLKAYDFITQMPIPPNAVIWRTLLGACSFYGDLKLAEQVKKRLSELDPKN 874
            QL KAYDF+ QMP+PPNAVIWRTLLGACSF+GD+++AEQVK+RLSELDP N
Sbjct: 422  QLHKAYDFVVQMPVPPNAVIWRTLLGACSFFGDIEMAEQVKERLSELDPDN 472


>ref|XP_002328557.1| predicted protein [Populus trichocarpa]
          Length = 643

 Score =  414 bits (1063), Expect = e-113
 Identities = 197/289 (68%), Positives = 240/289 (83%)
 Frame = +2

Query: 8    RCGDVKGAERVFNLMPAKNLASYNLMLAGYMKLGEFELARKVFEEMPMRDEVSWSTMITG 187
            R GD+KG   +F+LMP +NL S+N+MLAGY K GE ELAR++F EMPM+D+VSWSTMI G
Sbjct: 184  RGGDMKGGRELFDLMPVRNLMSWNVMLAGYTKAGELELAREMFLEMPMKDDVSWSTMIVG 243

Query: 188  LAQDGCFNEAFEYFRKLHVVGMRPNEVSLTGVLSACAHSGALEFAKILHGFIEKVGLLWI 367
             A +G F EAF +FR+L   GMRPNE SLTGVLSACA +GALEF KILHGFIEK GL WI
Sbjct: 244  FAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGALEFGKILHGFIEKSGLAWI 303

Query: 368  TPVNNALIDTYSKCGNVDMARLVFQRMPGKKSIVSWTSMIVGLAMQGYGEEALSLFNEME 547
              VNNAL+DTYSKCGNV MA+LVF+R+  +++IVSWTSM+  LAM G+GEEA+ +F++ME
Sbjct: 304  VSVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALAMHGHGEEAIGIFHKME 363

Query: 548  QTGTIPDGVSVIAILYACSHAGLVEQGRQVFDKITKVYLIKPEIEHYGCMVDLYGRAGQL 727
            ++G  PD ++ I++LYACSHAGLVEQG + FDK+  +Y I+P IEHYGCMVDLYGRAGQL
Sbjct: 364  ESGIRPDEIAFISLLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLYGRAGQL 423

Query: 728  LKAYDFITQMPIPPNAVIWRTLLGACSFYGDLKLAEQVKKRLSELDPKN 874
             KAY+F+ QMPIP  A+IWRTLLGACS +GD+KLAEQVK+RLSELDP N
Sbjct: 424  QKAYEFVCQMPIPCTAIIWRTLLGACSMHGDVKLAEQVKERLSELDPNN 472


>gb|EMJ12484.1| hypothetical protein PRUPE_ppa002699mg [Prunus persica]
          Length = 643

 Score =  413 bits (1062), Expect = e-113
 Identities = 191/290 (65%), Positives = 242/290 (83%)
 Frame = +2

Query: 5    FRCGDVKGAERVFNLMPAKNLASYNLMLAGYMKLGEFELARKVFEEMPMRDEVSWSTMIT 184
            FRCGDV+GAE +F+ MP +NL S+N++LAGY+K  E ELA+K F  MPM+D+VSWSTMI 
Sbjct: 183  FRCGDVEGAETMFDRMPLRNLTSWNVLLAGYVKADELELAKKAFLRMPMKDDVSWSTMIV 242

Query: 185  GLAQDGCFNEAFEYFRKLHVVGMRPNEVSLTGVLSACAHSGALEFAKILHGFIEKVGLLW 364
            G AQ GCF+EAF +FR+L   G+RPNEVSLTGVLSACA +GA EF KILHG +EK G LW
Sbjct: 243  GYAQSGCFDEAFGFFRELQREGIRPNEVSLTGVLSACAQAGAFEFGKILHGLVEKAGFLW 302

Query: 365  ITPVNNALIDTYSKCGNVDMARLVFQRMPGKKSIVSWTSMIVGLAMQGYGEEALSLFNEM 544
            +  VNNAL+D YSK GNVDMARLVF+RMP KKSI+SWTSMI G AM GYG+EA  +F++M
Sbjct: 303  MISVNNALLDAYSKSGNVDMARLVFKRMPEKKSIISWTSMIAGFAMHGYGKEATQVFHDM 362

Query: 545  EQTGTIPDGVSVIAILYACSHAGLVEQGRQVFDKITKVYLIKPEIEHYGCMVDLYGRAGQ 724
            E +G  PDG++ I++LYACSHAGL+++G + F K+  +Y I+P IEHYGCMVDLYGRAG+
Sbjct: 363  EASGIRPDGITFISVLYACSHAGLIDEGCEYFSKMRYLYGIEPAIEHYGCMVDLYGRAGK 422

Query: 725  LLKAYDFITQMPIPPNAVIWRTLLGACSFYGDLKLAEQVKKRLSELDPKN 874
            L KAYDF++Q+P+ PNAV+WRTLLGACS +G+++LAEQVK+ LS+L+P+N
Sbjct: 423  LQKAYDFVSQLPMSPNAVVWRTLLGACSIHGNVELAEQVKEVLSKLEPEN 472


>ref|XP_006362625.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g74630-like [Solanum tuberosum]
          Length = 526

 Score =  408 bits (1048), Expect = e-111
 Identities = 193/292 (66%), Positives = 236/292 (80%)
 Frame = +2

Query: 2   FFRCGDVKGAERVFNLMPAKNLASYNLMLAGYMKLGEFELARKVFEEMPMRDEVSWSTMI 181
           +FR  DV GA++VF L+P +NL ++N+MLAGY K GE E A  +F +MP RD+VSWS+MI
Sbjct: 65  YFRGSDVSGADKVFGLLPFRNLTTWNVMLAGYTKAGELERAEGLFLQMPSRDDVSWSSMI 124

Query: 182 TGLAQDGCFNEAFEYFRKLHVVGMRPNEVSLTGVLSACAHSGALEFAKILHGFIEKVGLL 361
            G + +G F+EA   FR+L   G +PNEVSLT  LSACA +GA +F  +LH FIEKVGL+
Sbjct: 125 VGFSHNGXFDEALGVFRELVGSGSKPNEVSLTVALSACAQAGAFKFGMVLHSFIEKVGLV 184

Query: 362 WITPVNNALIDTYSKCGNVDMARLVFQRMPGKKSIVSWTSMIVGLAMQGYGEEALSLFNE 541
           WI+ VNNAL+DTYSKCGNV MARLVF+RM GKK+IVSWTSMI GLAMQGYGE  +  F+E
Sbjct: 185 WISSVNNALLDTYSKCGNVLMARLVFERMLGKKTIVSWTSMIAGLAMQGYGEXVIKYFHE 244

Query: 542 MEQTGTIPDGVSVIAILYACSHAGLVEQGRQVFDKITKVYLIKPEIEHYGCMVDLYGRAG 721
           ME++G  PDGV+ I++LYACSHAGLVE G ++F K+ + Y I+P IEHYGCMVD YGRAG
Sbjct: 245 MEESGIRPDGVTFISVLYACSHAGLVEXGHELFSKMAETYDIEPTIEHYGCMVDFYGRAG 304

Query: 722 QLLKAYDFITQMPIPPNAVIWRTLLGACSFYGDLKLAEQVKKRLSELDPKNC 877
           QL KAY+F+ QMP+PPNAVIWRTLLGACSF GD+++AEQV KRLSELDP NC
Sbjct: 305 QLRKAYNFVVQMPVPPNAVIWRTLLGACSFLGDIEMAEQVNKRLSELDPDNC 356


>ref|XP_006601432.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g74580-like [Glycine max]
          Length = 1428

 Score =  406 bits (1044), Expect = e-111
 Identities = 194/290 (66%), Positives = 237/290 (81%)
 Frame = +2

Query: 5    FRCGDVKGAERVFNLMPAKNLASYNLMLAGYMKLGEFELARKVFEEMPMRDEVSWSTMIT 184
            FRCGDV+GA+ VF  MP +NL S+N MLAGY K GE  LAR+VF EMP+RDEVSWSTMI 
Sbjct: 968  FRCGDVEGAQDVFGCMPVRNLTSWNGMLAGYAKAGELGLARRVFYEMPLRDEVSWSTMIV 1027

Query: 185  GLAQDGCFNEAFEYFRKLHVVGMRPNEVSLTGVLSACAHSGALEFAKILHGFIEKVGLLW 364
            G A +GCF+EAF +FR+L    +R NEVSLTGVLSACA +GA EF KILHGF+EK G L+
Sbjct: 1028 GFAHNGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAGFLY 1087

Query: 365  ITPVNNALIDTYSKCGNVDMARLVFQRMPGKKSIVSWTSMIVGLAMQGYGEEALSLFNEM 544
            +  VNNALIDTYSKCGNV MARLVFQ MP  +SIVSWTS+I GLAM G GEEA+ LF+EM
Sbjct: 1088 VGSVNNALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAMHGCGEEAIQLFHEM 1147

Query: 545  EQTGTIPDGVSVIAILYACSHAGLVEQGRQVFDKITKVYLIKPEIEHYGCMVDLYGRAGQ 724
            E++G  PDG++ I++LYACSH+GLVE+G  +F K+  +Y I+P IEHYGCMVDLYGRA +
Sbjct: 1148 EESGVRPDGITFISLLYACSHSGLVEEGCGLFSKMKNLYGIEPAIEHYGCMVDLYGRAAR 1207

Query: 725  LLKAYDFITQMPIPPNAVIWRTLLGACSFYGDLKLAEQVKKRLSELDPKN 874
            L KAY+FI +MP+ PNA+IWRTLLGACS +G++++AE VK RL+E+DP N
Sbjct: 1208 LQKAYEFICEMPVSPNAIIWRTLLGACSIHGNIEMAELVKARLAEMDPDN 1257



 Score = 77.8 bits (190), Expect = 5e-12
 Identities = 73/284 (25%), Positives = 133/284 (46%), Gaps = 12/284 (4%)
 Frame = +2

Query: 62   NLASYNLMLAGYMKLGEFELARKVFEEMPMR----DEVSWSTMITGLAQDGCFNEAFEYF 229
            NL ++N+ + G  + G  + A ++   +       D V+++ +I GL ++    EA EY 
Sbjct: 250  NLFTFNIFVQGLCREGALDRAVRLLASVSREGLSLDVVTYNILICGLCRNSRVVEAEEYL 309

Query: 230  RKLHVVGMRPNEVSLTGVLSACAHSGALEFA-KILHGFIEKVGLLWITPVNNALIDTYSK 406
            RK+   G  P++++   ++      G ++ A ++L   + K G         +LI+ + K
Sbjct: 310  RKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFK-GFKPDEFTYCSLINGFCK 368

Query: 407  CGNVDMARLVFQRMPGK---KSIVSWTSMIVGLAMQGYGEEALSLFNEMEQTGTIPDGVS 577
             G+ D A  VF+   GK    SIV + ++I GL+ QG    AL L NEM + G +P+  +
Sbjct: 369  DGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWT 428

Query: 578  VIAILYACSHAGLV-EQGRQVFDKITKVYLIKPEIEHYGCMVDLYGRAGQLLKAYDFITQ 754
               ++      G V +    V D I K     P+I  Y  ++D Y +  +L  A + + +
Sbjct: 429  YNLVINGLCKMGCVSDASHLVDDAIAKG--CPPDIFTYNTLIDGYCKQLKLDSATEMVNR 486

Query: 755  M---PIPPNAVIWRTLLGACSFYGDLKLAEQVKKRLSELDPKNC 877
            M    + P+ + + TLL      G    +E+V +    ++ K C
Sbjct: 487  MWSQGMTPDVITYNTLLNGLCKAGK---SEEVMEIFKAMEEKGC 527


>gb|EPS64459.1| hypothetical protein M569_10321 [Genlisea aurea]
          Length = 512

 Score =  405 bits (1042), Expect = e-111
 Identities = 198/286 (69%), Positives = 236/286 (82%)
 Frame = +2

Query: 8    RCGDVKGAERVFNLMPAKNLASYNLMLAGYMKLGEFELARKVFEEMPMRDEVSWSTMITG 187
            R GDVKGAE+ FN +P KNL SYNLML+GY KLGE  LAR++F++MP RD+VSWSTMI+G
Sbjct: 181  RYGDVKGAEKAFNSIPFKNLTSYNLMLSGYSKLGEIGLARRLFDQMPSRDDVSWSTMISG 240

Query: 188  LAQDGCFNEAFEYFRKLHVVGMRPNEVSLTGVLSACAHSGALEFAKILHGFIEKVGLLWI 367
            L Q+G F  AF  FR+L  V MRPNEV+LTG+LSACA SGALEF++ LH FI+K GL WI
Sbjct: 241  LVQNGYFGVAFGCFRELLRVDMRPNEVTLTGLLSACAQSGALEFSETLHCFIQKFGLFWI 300

Query: 368  TPVNNALIDTYSKCGNVDMARLVFQRMPGKKSIVSWTSMIVGLAMQGYGEEALSLFNEME 547
            T VNNALID YSKCG VDMARLVF  M  KK+I+S+TS+IVGLA+QG+ +EAL LF EME
Sbjct: 301  TTVNNALIDAYSKCGRVDMARLVFDTMVAKKNILSYTSLIVGLAVQGHAQEALKLFAEME 360

Query: 548  QTGTIPDGVSVIAILYACSHAGLVEQGRQVFDKITKVYLIKPEIEHYGCMVDLYGRAGQL 727
             +G  PDGV  IA+LYACSH+G +EQGR +FD++T VY I+PEIEHYGCMVDLYGR GQL
Sbjct: 361  SSGIQPDGVVFIALLYACSHSGFIEQGRDIFDRMTGVYDIRPEIEHYGCMVDLYGRTGQL 420

Query: 728  LKAYDFITQMPIPPNAVIWRTLLGACSFYGDLKLAEQVKKRLSELD 865
             KAY+FI+ MPI P  VIWRTLLGACSF+GD+ LAE V+KRL+E+D
Sbjct: 421  WKAYEFISGMPIAPTPVIWRTLLGACSFHGDVNLAELVEKRLAEMD 466


>ref|XP_006301886.1| hypothetical protein CARUB_v10022358mg [Capsella rubella]
            gi|482570596|gb|EOA34784.1| hypothetical protein
            CARUB_v10022358mg [Capsella rubella]
          Length = 643

 Score =  404 bits (1039), Expect = e-110
 Identities = 191/290 (65%), Positives = 232/290 (80%)
 Frame = +2

Query: 5    FRCGDVKGAERVFNLMPAKNLASYNLMLAGYMKLGEFELARKVFEEMPMRDEVSWSTMIT 184
            FR  D   A  +F+ M  KN  S+N+MLAGY K GE E A+++F EMP RD+VSWST+I 
Sbjct: 183  FRGNDFSKAREIFDNMLVKNHTSWNVMLAGYTKAGELESAKRIFSEMPHRDDVSWSTLIV 242

Query: 185  GLAQDGCFNEAFEYFRKLHVVGMRPNEVSLTGVLSACAHSGALEFAKILHGFIEKVGLLW 364
            G A +G FN+AF YFR+L  V MRPNEVSLTGVLSAC+ SGALEF K +HGF+EK G  W
Sbjct: 243  GFAHNGIFNDAFSYFRELQRVEMRPNEVSLTGVLSACSQSGALEFGKTIHGFVEKSGYSW 302

Query: 365  ITPVNNALIDTYSKCGNVDMARLVFQRMPGKKSIVSWTSMIVGLAMQGYGEEALSLFNEM 544
            I  VNNALID YS+CGNV MARLVFQ MP K+S+VSWTSMI GLAM G GEEA+ LFNEM
Sbjct: 303  IVSVNNALIDMYSRCGNVPMARLVFQGMPDKRSVVSWTSMIAGLAMHGQGEEAIRLFNEM 362

Query: 545  EQTGTIPDGVSVIAILYACSHAGLVEQGRQVFDKITKVYLIKPEIEHYGCMVDLYGRAGQ 724
             ++G  PDG+S I++LYACSHAGL+++G   F K+ +VY I+P IEHYGCMVDLYGR+G+
Sbjct: 363  TKSGATPDGISFISLLYACSHAGLIKEGEDYFSKMKRVYHIEPAIEHYGCMVDLYGRSGK 422

Query: 725  LLKAYDFITQMPIPPNAVIWRTLLGACSFYGDLKLAEQVKKRLSELDPKN 874
            L KAY+FI QMPIPP A++WRTLLGACS +G+++LAEQVK+RL+ELDP N
Sbjct: 423  LQKAYNFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNN 472



 Score = 86.7 bits (213), Expect = 1e-14
 Identities = 62/248 (25%), Positives = 108/248 (43%), Gaps = 3/248 (1%)
 Frame = +2

Query: 83  MLAGYMKLGEFELARKVFEEMPMRDEVSWSTMITGLAQDGCFNEAFEYFRKLHVVGMRPN 262
           ++  Y + G  E ARKVF+EM   + V+W+ +IT   +   F++A E F  + V      
Sbjct: 147 LIGMYGECGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDFSKAREIFDNMLVKNHTSW 206

Query: 263 EVSLTGVLSACAHSGALEFAKILHGFIEKVGLLWITPVNNALIDTYSKCGNVDMARLVFQ 442
            V L G                                       Y+K G ++ A+ +F 
Sbjct: 207 NVMLAG---------------------------------------YTKAGELESAKRIFS 227

Query: 443 RMPGKKSIVSWTSMIVGLAMQGYGEEALSLFNEMEQTGTIPDGVSVIAILYACSHAGLVE 622
            MP +   VSW+++IVG A  G   +A S F E+++    P+ VS+  +L ACS +G +E
Sbjct: 228 EMPHRDD-VSWSTLIVGFAHNGIFNDAFSYFRELQRVEMRPNEVSLTGVLSACSQSGALE 286

Query: 623 QGRQVFDKITK---VYLIKPEIEHYGCMVDLYGRAGQLLKAYDFITQMPIPPNAVIWRTL 793
            G+ +   + K    +++         ++D+Y R G +  A      MP   + V W ++
Sbjct: 287 FGKTIHGFVEKSGYSWIVSVN----NALIDMYSRCGNVPMARLVFQGMPDKRSVVSWTSM 342

Query: 794 LGACSFYG 817
           +   + +G
Sbjct: 343 IAGLAMHG 350


>ref|NP_177601.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75169836|sp|Q9CA54.1|PP122_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At1g74630 gi|12324801|gb|AAG52363.1|AC011765_15
            hypothetical protein; 86841-88772 [Arabidopsis thaliana]
            gi|332197495|gb|AEE35616.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 643

 Score =  404 bits (1037), Expect = e-110
 Identities = 191/290 (65%), Positives = 232/290 (80%)
 Frame = +2

Query: 5    FRCGDVKGAERVFNLMPAKNLASYNLMLAGYMKLGEFELARKVFEEMPMRDEVSWSTMIT 184
            FR  DV GA  +F+ M  +N  S+N+MLAGY+K GE E A+++F EMP RD+VSWSTMI 
Sbjct: 183  FRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIV 242

Query: 185  GLAQDGCFNEAFEYFRKLHVVGMRPNEVSLTGVLSACAHSGALEFAKILHGFIEKVGLLW 364
            G+A +G FNE+F YFR+L   GM PNEVSLTGVLSAC+ SG+ EF KILHGF+EK G  W
Sbjct: 243  GIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSW 302

Query: 365  ITPVNNALIDTYSKCGNVDMARLVFQRMPGKKSIVSWTSMIVGLAMQGYGEEALSLFNEM 544
            I  VNNALID YS+CGNV MARLVF+ M  K+ IVSWTSMI GLAM G GEEA+ LFNEM
Sbjct: 303  IVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEM 362

Query: 545  EQTGTIPDGVSVIAILYACSHAGLVEQGRQVFDKITKVYLIKPEIEHYGCMVDLYGRAGQ 724
               G  PDG+S I++L+ACSHAGL+E+G   F ++ +VY I+PEIEHYGCMVDLYGR+G+
Sbjct: 363  TAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGK 422

Query: 725  LLKAYDFITQMPIPPNAVIWRTLLGACSFYGDLKLAEQVKKRLSELDPKN 874
            L KAYDFI QMPIPP A++WRTLLGACS +G+++LAEQVK+RL+ELDP N
Sbjct: 423  LQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNN 472


>dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana]
            gi|62318835|dbj|BAD93890.1| hypothetical protein
            [Arabidopsis thaliana]
          Length = 635

 Score =  404 bits (1037), Expect = e-110
 Identities = 191/290 (65%), Positives = 232/290 (80%)
 Frame = +2

Query: 5    FRCGDVKGAERVFNLMPAKNLASYNLMLAGYMKLGEFELARKVFEEMPMRDEVSWSTMIT 184
            FR  DV GA  +F+ M  +N  S+N+MLAGY+K GE E A+++F EMP RD+VSWSTMI 
Sbjct: 175  FRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIV 234

Query: 185  GLAQDGCFNEAFEYFRKLHVVGMRPNEVSLTGVLSACAHSGALEFAKILHGFIEKVGLLW 364
            G+A +G FNE+F YFR+L   GM PNEVSLTGVLSAC+ SG+ EF KILHGF+EK G  W
Sbjct: 235  GIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSW 294

Query: 365  ITPVNNALIDTYSKCGNVDMARLVFQRMPGKKSIVSWTSMIVGLAMQGYGEEALSLFNEM 544
            I  VNNALID YS+CGNV MARLVF+ M  K+ IVSWTSMI GLAM G GEEA+ LFNEM
Sbjct: 295  IVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEM 354

Query: 545  EQTGTIPDGVSVIAILYACSHAGLVEQGRQVFDKITKVYLIKPEIEHYGCMVDLYGRAGQ 724
               G  PDG+S I++L+ACSHAGL+E+G   F ++ +VY I+PEIEHYGCMVDLYGR+G+
Sbjct: 355  TAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGK 414

Query: 725  LLKAYDFITQMPIPPNAVIWRTLLGACSFYGDLKLAEQVKKRLSELDPKN 874
            L KAYDFI QMPIPP A++WRTLLGACS +G+++LAEQVK+RL+ELDP N
Sbjct: 415  LQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNN 464


>gb|EOY21836.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
            cacao]
          Length = 643

 Score =  399 bits (1025), Expect = e-109
 Identities = 190/290 (65%), Positives = 233/290 (80%)
 Frame = +2

Query: 5    FRCGDVKGAERVFNLMPAKNLASYNLMLAGYMKLGEFELARKVFEEMPMRDEVSWSTMIT 184
            FRCGDVKGA ++F++MP  N  S N+MLAG+ K GE ELA+K+F EM ++D+VSWSTMI 
Sbjct: 183  FRCGDVKGARKMFDMMPFTNSTSSNVMLAGFAKAGEMELAKKMFWEMKVKDDVSWSTMIV 242

Query: 185  GLAQDGCFNEAFEYFRKLHVVGMRPNEVSLTGVLSACAHSGALEFAKILHGFIEKVGLLW 364
            G A +  F EAF YFR+L  VG+ PNEVSLTGVLS CA +GA EF KI HG+IEK G  W
Sbjct: 243  GFAHNASFCEAFGYFRELRRVGLTPNEVSLTGVLSGCAQAGAFEFGKIFHGYIEKSGCNW 302

Query: 365  ITPVNNALIDTYSKCGNVDMARLVFQRMPGKKSIVSWTSMIVGLAMQGYGEEALSLFNEM 544
            IT VNNAL+D Y++CG+V+MARLVF+ MP KKS+VSWTSMI GLAM GY EEA+ +F+EM
Sbjct: 303  ITAVNNALVDMYARCGHVEMARLVFENMPYKKSVVSWTSMIEGLAMHGYAEEAIQVFHEM 362

Query: 545  EQTGTIPDGVSVIAILYACSHAGLVEQGRQVFDKITKVYLIKPEIEHYGCMVDLYGRAGQ 724
            E +G  PD ++ I ILYACSHAGL+EQG   F K+  VY I+P+IEHYGCMVDLYGRAG 
Sbjct: 363  EGSGIRPDWITFITILYACSHAGLIEQGCSYFSKMKNVYDIEPKIEHYGCMVDLYGRAGY 422

Query: 725  LLKAYDFITQMPIPPNAVIWRTLLGACSFYGDLKLAEQVKKRLSELDPKN 874
            L KA DF+ QMP+ PNA+IWRTLLGACS +G+++LAEQVK+RLSEL+P +
Sbjct: 423  LQKANDFVCQMPVSPNAIIWRTLLGACSIHGNVELAEQVKERLSELEPND 472


>ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
            lyrata] gi|297333389|gb|EFH63807.1| hypothetical protein
            ARALYDRAFT_339650 [Arabidopsis lyrata subsp. lyrata]
          Length = 1221

 Score =  399 bits (1025), Expect = e-109
 Identities = 187/290 (64%), Positives = 232/290 (80%)
 Frame = +2

Query: 5    FRCGDVKGAERVFNLMPAKNLASYNLMLAGYMKLGEFELARKVFEEMPMRDEVSWSTMIT 184
            FR  DV GA  +F+ M  +N  S+N+MLAGY+K GE E A+++F EMP RD+VSWSTMI 
Sbjct: 350  FRGNDVSGAREIFDKMLVRNHTSWNVMLAGYIKAGELECAKRIFSEMPHRDDVSWSTMIV 409

Query: 185  GLAQDGCFNEAFEYFRKLHVVGMRPNEVSLTGVLSACAHSGALEFAKILHGFIEKVGLLW 364
            G + +G FNE+F YFR+L    MRPNEVSLTGVLSAC+ SGA EF K LHGF+EK G  W
Sbjct: 410  GFSHNGSFNESFSYFRELLRAEMRPNEVSLTGVLSACSQSGAFEFGKTLHGFVEKSGYSW 469

Query: 365  ITPVNNALIDTYSKCGNVDMARLVFQRMPGKKSIVSWTSMIVGLAMQGYGEEALSLFNEM 544
            I  VNNALID YS+CGNV MARLVF+ M  K+SIVSWTSMI GLAM G+GEEA+ +FNEM
Sbjct: 470  IVSVNNALIDMYSRCGNVPMARLVFEGMQEKRSIVSWTSMIAGLAMHGHGEEAIRIFNEM 529

Query: 545  EQTGTIPDGVSVIAILYACSHAGLVEQGRQVFDKITKVYLIKPEIEHYGCMVDLYGRAGQ 724
             ++G +PD +S I++LYACSHAGL+++G   F K+ +VY I+P +EHYGCMVDLYGR+G+
Sbjct: 530  TESGVMPDEISFISLLYACSHAGLIKEGEGYFSKMKRVYHIEPAVEHYGCMVDLYGRSGK 589

Query: 725  LLKAYDFITQMPIPPNAVIWRTLLGACSFYGDLKLAEQVKKRLSELDPKN 874
            L KAY FI QMPIPP A++WRTLLGACS +G+++LAEQVK+RL+ELDP N
Sbjct: 590  LQKAYSFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNN 639



 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 66/262 (25%), Positives = 116/262 (44%), Gaps = 3/262 (1%)
 Frame = +2

Query: 83  MLAGYMKLGEFELARKVFEEMPMRDEVSWSTMITGLAQDGCFNEAFEYFRKLHVVGMRPN 262
           ++  Y + G    ARKVF+EMP  + V+W+ ++T      CF               R N
Sbjct: 314 LIGMYGECGCVGFARKVFDEMPQPNLVAWNAVVT-----ACF---------------RGN 353

Query: 263 EVSLTGVLSACAHSGALEFAKILHGFIEKVGLLWITPVNNALIDTYSKCGNVDMARLVFQ 442
           +V           SGA E   I    + +    W     N ++  Y K G ++ A+ +F 
Sbjct: 354 DV-----------SGARE---IFDKMLVRNHTSW-----NVMLAGYIKAGELECAKRIFS 394

Query: 443 RMPGKKSIVSWTSMIVGLAMQGYGEEALSLFNEMEQTGTIPDGVSVIAILYACSHAGLVE 622
            MP +   VSW++MIVG +  G   E+ S F E+ +    P+ VS+  +L ACS +G  E
Sbjct: 395 EMPHRDD-VSWSTMIVGFSHNGSFNESFSYFRELLRAEMRPNEVSLTGVLSACSQSGAFE 453

Query: 623 QGRQVFDKITK---VYLIKPEIEHYGCMVDLYGRAGQLLKAYDFITQMPIPPNAVIWRTL 793
            G+ +   + K    +++         ++D+Y R G +  A      M    + V W ++
Sbjct: 454 FGKTLHGFVEKSGYSWIVSVN----NALIDMYSRCGNVPMARLVFEGMQEKRSIVSWTSM 509

Query: 794 LGACSFYGDLKLAEQVKKRLSE 859
           +   + +G  + A ++   ++E
Sbjct: 510 IAGLAMHGHGEEAIRIFNEMTE 531


>gb|EXB44682.1| hypothetical protein L484_015939 [Morus notabilis]
          Length = 644

 Score =  395 bits (1015), Expect = e-107
 Identities = 188/290 (64%), Positives = 232/290 (80%)
 Frame = +2

Query: 5    FRCGDVKGAERVFNLMPAKNLASYNLMLAGYMKLGEFELARKVFEEMPMRDEVSWSTMIT 184
            FRCGD++G E +F  MP +NL S+++MLAGY+K GE ELARKVF  MP++D+VSWSTMI 
Sbjct: 185  FRCGDLEGGEALFERMPVRNLTSWDVMLAGYVKAGELELARKVFSRMPVKDDVSWSTMIV 244

Query: 185  GLAQDGCFNEAFEYFRKLHVVGMRPNEVSLTGVLSACAHSGALEFAKILHGFIEKVGLLW 364
            G +Q+ CF+ AFE+FR+L   G+RPNE SLTGVLSA A +GA EFAKILHGF+EK G LW
Sbjct: 245  GFSQNECFDGAFEFFRELRRAGLRPNEASLTGVLSASAQAGAFEFAKILHGFVEKAGFLW 304

Query: 365  ITPVNNALIDTYSKCGNVDMARLVFQRMPGKKSIVSWTSMIVGLAMQGYGEEALSLFNEM 544
            +  VNNAL+D YSKCGNV MARLVF+ M  +KSIVSWTSMI  LAM GYG EA+ LF++M
Sbjct: 305  LVSVNNALLDMYSKCGNVGMARLVFETMTVEKSIVSWTSMIAALAMHGYGAEAIRLFHKM 364

Query: 545  EQTGTIPDGVSVIAILYACSHAGLVEQGRQVFDKITKVYLIKPEIEHYGCMVDLYGRAGQ 724
            E +   PDG++ I+ILYACSHAGL+E+G + F K+     I+P IEHYGCM+DLYGRAG+
Sbjct: 365  EDSRIRPDGITFISILYACSHAGLIEEGSRYFSKMIDSG-IEPSIEHYGCMIDLYGRAGK 423

Query: 725  LLKAYDFITQMPIPPNAVIWRTLLGACSFYGDLKLAEQVKKRLSELDPKN 874
            L KAYD+  QMPI PNA+ WRTLLGACS +G++ LAE+VK+RL ELDP N
Sbjct: 424  LQKAYDYTCQMPISPNAISWRTLLGACSLHGNVDLAERVKERLFELDPNN 473


>ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74630-like
            [Cucumis sativus] gi|449487109|ref|XP_004157499.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At1g74630-like [Cucumis sativus]
          Length = 642

 Score =  395 bits (1015), Expect = e-107
 Identities = 190/290 (65%), Positives = 233/290 (80%)
 Frame = +2

Query: 5    FRCGDVKGAERVFNLMPAKNLASYNLMLAGYMKLGEFELARKVFEEMPMRDEVSWSTMIT 184
            FRC  VK AE+VF  MP +NL S+N+MLAGY K GE +LAR+VF +MP++D+VSWSTMI 
Sbjct: 183  FRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVSWSTMIV 242

Query: 185  GLAQDGCFNEAFEYFRKLHVVGMRPNEVSLTGVLSACAHSGALEFAKILHGFIEKVGLLW 364
            G A +G FN+AF +FR++   GMRPNEVSLTGVLSACA +GA EF +ILHGF+EK G L 
Sbjct: 243  GFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEKSGFLQ 302

Query: 365  ITPVNNALIDTYSKCGNVDMARLVFQRMPGKKSIVSWTSMIVGLAMQGYGEEALSLFNEM 544
            I  VNNALIDTYSKCGN+DMARLVF  M  ++S VSWT+MI G+AM GYGEEA+ LFNEM
Sbjct: 303  IISVNNALIDTYSKCGNLDMARLVFDNML-RRSAVSWTAMIAGMAMHGYGEEAIRLFNEM 361

Query: 545  EQTGTIPDGVSVIAILYACSHAGLVEQGRQVFDKITKVYLIKPEIEHYGCMVDLYGRAGQ 724
            E++   PD ++ I+ILYACSHAGLV+ G   F ++   Y I+P IEHYGCMVDLYGRAG+
Sbjct: 362  EESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGK 421

Query: 725  LLKAYDFITQMPIPPNAVIWRTLLGACSFYGDLKLAEQVKKRLSELDPKN 874
            L +AYDF+ QMPI PN ++WRTLLGACS +G+L LA QVK++LSELDP+N
Sbjct: 422  LQQAYDFVCQMPISPNDIVWRTLLGACSIHGNLYLAGQVKRQLSELDPEN 471


>ref|XP_006390406.1| hypothetical protein EUTSA_v10018254mg [Eutrema salsugineum]
            gi|557086840|gb|ESQ27692.1| hypothetical protein
            EUTSA_v10018254mg [Eutrema salsugineum]
          Length = 645

 Score =  394 bits (1013), Expect = e-107
 Identities = 186/290 (64%), Positives = 230/290 (79%)
 Frame = +2

Query: 5    FRCGDVKGAERVFNLMPAKNLASYNLMLAGYMKLGEFELARKVFEEMPMRDEVSWSTMIT 184
            FR  DV  A+ +F+ M  ++  S+N+MLAGY K GE E A++VF EMP++D+VSWSTMI 
Sbjct: 185  FRGNDVAAAKEIFDKMLVRDHMSWNVMLAGYTKAGELESAKRVFSEMPLKDDVSWSTMIV 244

Query: 185  GLAQDGCFNEAFEYFRKLHVVGMRPNEVSLTGVLSACAHSGALEFAKILHGFIEKVGLLW 364
            G A +G FNEAF YF++L    MRPNEVSLTGVLSAC+ SGA EF K LHGF+EK G  W
Sbjct: 245  GFAHNGSFNEAFSYFKELRRAEMRPNEVSLTGVLSACSQSGAFEFGKTLHGFLEKTGYCW 304

Query: 365  ITPVNNALIDTYSKCGNVDMARLVFQRMPGKKSIVSWTSMIVGLAMQGYGEEALSLFNEM 544
            I  V NALID YS+CGNV MA+LVF+ MP K+SIVSWTSMI GLAM G+GEEA+  FNEM
Sbjct: 305  IISVRNALIDMYSRCGNVAMAKLVFEGMPEKRSIVSWTSMIAGLAMHGHGEEAIRFFNEM 364

Query: 545  EQTGTIPDGVSVIAILYACSHAGLVEQGRQVFDKITKVYLIKPEIEHYGCMVDLYGRAGQ 724
             Q+G  PDG++ I++LYACSH GL+++G   F K+ +VY I+PEIEHYGCMVDLYGR+G+
Sbjct: 365  TQSGVRPDGIAFISLLYACSHGGLIKEGEYYFSKMKRVYHIEPEIEHYGCMVDLYGRSGK 424

Query: 725  LLKAYDFITQMPIPPNAVIWRTLLGACSFYGDLKLAEQVKKRLSELDPKN 874
            L KAY+FI QMPI P A++WRTLLGACS +G+ +LAEQVK+RL+ELDP N
Sbjct: 425  LKKAYNFICQMPISPTAIVWRTLLGACSSHGNTELAEQVKQRLNELDPNN 474


>ref|XP_004301149.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74630-like
            [Fragaria vesca subsp. vesca]
          Length = 643

 Score =  384 bits (987), Expect = e-104
 Identities = 180/290 (62%), Positives = 231/290 (79%)
 Frame = +2

Query: 5    FRCGDVKGAERVFNLMPAKNLASYNLMLAGYMKLGEFELARKVFEEMPMRDEVSWSTMIT 184
            FRCGDV+ AE VF  MP ++  S+N++LAGY+K GE  LAR+ F  MP++D+VSWSTMI 
Sbjct: 183  FRCGDVEVAEEVFGSMPLRDSTSWNIVLAGYVKAGELALAREAFWRMPVKDDVSWSTMIV 242

Query: 185  GLAQDGCFNEAFEYFRKLHVVGMRPNEVSLTGVLSACAHSGALEFAKILHGFIEKVGLLW 364
            G +Q GCF+EAF +F +L   G+  NE SLTGVLS CA +GA+EF ++LHG +EK G L 
Sbjct: 243  GFSQSGCFDEAFGFFGELQREGVGANEASLTGVLSVCAQAGAVEFGRVLHGLVEKGGFLS 302

Query: 365  ITPVNNALIDTYSKCGNVDMARLVFQRMPGKKSIVSWTSMIVGLAMQGYGEEALSLFNEM 544
            +  VNNAL+D YSK GNV+MARLVF+RMP +KS+VSWTSMI  LAM GYG+EA+ +F +M
Sbjct: 303  LISVNNALLDMYSKSGNVEMARLVFERMPERKSVVSWTSMIAALAMHGYGKEAIQVFRKM 362

Query: 545  EQTGTIPDGVSVIAILYACSHAGLVEQGRQVFDKITKVYLIKPEIEHYGCMVDLYGRAGQ 724
            E +G  PDG++ I++LYACSHAGLV +G + F K+ ++Y I P IEHYGCMVDLYGRAG+
Sbjct: 363  EASGVRPDGITFISVLYACSHAGLVNEGCEYFSKMREMYGIDPAIEHYGCMVDLYGRAGK 422

Query: 725  LLKAYDFITQMPIPPNAVIWRTLLGACSFYGDLKLAEQVKKRLSELDPKN 874
            L KAY F+ Q+PI PNA+IWRTLLGACS +G+++LAEQVK+RLS+LDP N
Sbjct: 423  LKKAYGFVCQLPISPNAIIWRTLLGACSIHGNVELAEQVKERLSKLDPDN 472



 Score = 67.4 bits (163), Expect = 7e-09
 Identities = 73/311 (23%), Positives = 123/311 (39%), Gaps = 67/311 (21%)
 Frame = +2

Query: 122 ARKVFEEMPMRDEVSWSTMITGLAQDGCFNEAFEYFRKLHVVGMRPNEVSLTG-----VL 286
           AR++F   P  D   ++T+I GLA     + A   FR++     R N VS+        L
Sbjct: 58  ARRLFLHFPYPDAFMYNTLIRGLADSDNPHNALLLFREMR----RKNMVSIDSFTFAFTL 113

Query: 287 SACAHSGALEFAKILHGFIEKVGLLWITPVNNALIDTYSKCGNVDMARLVFQRMPGKKSI 466
            A A+S +L     LH      GL     V   L+  Y +CG+V  AR VF  M  + ++
Sbjct: 114 KAAANSRSLSGGTQLHCQAFIHGLYSHMFVGTTLVSVYGECGSVGHARKVFDEMT-EPNV 172

Query: 467 VSWTSMIV--------------------------GLAMQGY---GEEALS---------- 529
           V+W +++                            + + GY   GE AL+          
Sbjct: 173 VAWNAVLTACFRCGDVEVAEEVFGSMPLRDSTSWNIVLAGYVKAGELALAREAFWRMPVK 232

Query: 530 -----------------------LFNEMEQTGTIPDGVSVIAILYACSHAGLVEQGRQVF 640
                                   F E+++ G   +  S+  +L  C+ AG VE GR + 
Sbjct: 233 DDVSWSTMIVGFSQSGCFDEAFGFFGELQREGVGANEASLTGVLSVCAQAGAVEFGRVLH 292

Query: 641 DKITKVYLIKPEIEHYGCMVDLYGRAGQLLKAYDFITQMPIPPNAVIWRTLLGACSFYGD 820
             + K   +   I     ++D+Y ++G +  A     +MP   + V W +++ A + +G 
Sbjct: 293 GLVEKGGFLS-LISVNNALLDMYSKSGNVEMARLVFERMPERKSVVSWTSMIAALAMHGY 351

Query: 821 LKLAEQVKKRL 853
            K A QV +++
Sbjct: 352 GKEAIQVFRKM 362


>gb|ESW27309.1| hypothetical protein PHAVU_003G190600g [Phaseolus vulgaris]
          Length = 626

 Score =  378 bits (971), Expect = e-102
 Identities = 187/290 (64%), Positives = 226/290 (77%)
 Frame = +2

Query: 5    FRCGDVKGAERVFNLMPAKNLASYNLMLAGYMKLGEFELARKVFEEMPMRDEVSWSTMIT 184
            FRCGDV+GA  VF  MP +NL S+N+MLAGY K GE  LAR+VF +MP+RDEVSWSTMI 
Sbjct: 181  FRCGDVEGAGDVFGRMPLRNLTSWNVMLAGYAKAGELGLARRVFCDMPLRDEVSWSTMII 240

Query: 185  GLAQDGCFNEAFEYFRKLHVVGMRPNEVSLTGVLSACAHSGALEFAKILHGFIEKVGLLW 364
            G           E  R+    G+  NEVSLTGVLSACA +GA EF KILHGF+EK G L 
Sbjct: 241  G-----------ELLRE----GIGTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAGFLC 285

Query: 365  ITPVNNALIDTYSKCGNVDMARLVFQRMPGKKSIVSWTSMIVGLAMQGYGEEALSLFNEM 544
            +  VNNALIDTYSKCGNV MARLVFQ MPG +SIVSWT++I GLAM GYGEEA+ LF+EM
Sbjct: 286  VGSVNNALIDTYSKCGNVAMARLVFQNMPGARSIVSWTAIIAGLAMHGYGEEAIQLFHEM 345

Query: 545  EQTGTIPDGVSVIAILYACSHAGLVEQGRQVFDKITKVYLIKPEIEHYGCMVDLYGRAGQ 724
            E++G  PDG++ I++LYACSH+GLVE+G   F K+  +Y I+P IEHYGCMVDLYGRA +
Sbjct: 346  EESGVRPDGITFISLLYACSHSGLVEEGYVFFSKMKNLYGIEPAIEHYGCMVDLYGRAAR 405

Query: 725  LLKAYDFITQMPIPPNAVIWRTLLGACSFYGDLKLAEQVKKRLSELDPKN 874
            L KAY+FI +MP+ PNA+IWRTLLGACS +G+++LAE VK RL+E+DP N
Sbjct: 406  LQKAYEFICEMPVSPNAIIWRTLLGACSIHGNIELAELVKARLAEMDPGN 455


>ref|XP_003609069.1| Pentatricopeptide repeat protein [Medicago truncatula]
            gi|355510124|gb|AES91266.1| Pentatricopeptide repeat
            protein [Medicago truncatula]
          Length = 611

 Score =  316 bits (809), Expect = 8e-84
 Identities = 162/298 (54%), Positives = 206/298 (69%), Gaps = 7/298 (2%)
 Frame = +2

Query: 2    FFRCGDVKGAERVFNLMPAKNLASYNLMLAGYMKLG-------EFELARKVFEEMPMRDE 160
            +  CG  + A +VF+ M   N+ ++N ++    + G        F     VF EM MRD+
Sbjct: 158  YAECGCYEYARKVFDEMSQPNVVAWNAVVTACFRCGMWRVLGVSFGWREVVFCEMKMRDD 217

Query: 161  VSWSTMITGLAQDGCFNEAFEYFRKLHVVGMRPNEVSLTGVLSACAHSGALEFAKILHGF 340
             SWSTMI G A+ G F++AF +F++L     RP+EVSLTGVLSACA +GA EF KILHGF
Sbjct: 218  ASWSTMIVGFAKSGSFHDAFGFFKELLRDRNRPSEVSLTGVLSACAQAGAFEFGKILHGF 277

Query: 341  IEKVGLLWITPVNNALIDTYSKCGNVDMARLVFQRMPGKKSIVSWTSMIVGLAMQGYGEE 520
            +EK G L I  VNNALIDTYSKCGNVDMA+LVF                + LAM G  +E
Sbjct: 278  MEKAGFLCIVSVNNALIDTYSKCGNVDMAKLVFN---------------ISLAMHGRADE 322

Query: 521  ALSLFNEMEQTGTIPDGVSVIAILYACSHAGLVEQGRQVFDKITKVYLIKPEIEHYGCMV 700
            A+ +F+EME++G  PDGV+ I++LYACSH+GLVEQG  +F K+   Y I+P IEHYGCMV
Sbjct: 323  AIRVFHEMEESGVRPDGVTFISLLYACSHSGLVEQGCALFSKMRNFYGIEPAIEHYGCMV 382

Query: 701  DLYGRAGQLLKAYDFITQMPIPPNAVIWRTLLGACSFYGDLKLAEQVKKRLSELDPKN 874
            DLYGRA +L KAY+FI QMPI PN +IWRTLLGACS +G+++LAE VK RL+E+DP N
Sbjct: 383  DLYGRAARLQKAYEFIRQMPILPNVIIWRTLLGACSIHGNIELAELVKARLAEMDPNN 440



 Score = 60.8 bits (146), Expect = 6e-07
 Identities = 57/249 (22%), Positives = 102/249 (40%), Gaps = 28/249 (11%)
 Frame = +2

Query: 155 DEVSWSTMITGLAQDGCF-NEAFEYFRKLHVVGMRPNEVSLTGVLSACAHSGALEFA-KI 328
           D  S++  + G+A DGC   +  +        G   +    T ++S  A  G  E+A K+
Sbjct: 111 DSFSFAFTLKGIANDGCSKRQGIQLHSHAFRHGFDDHIFVGTTLISMYAECGCYEYARKV 170

Query: 329 LHGFIEKVGLLWITPVNNALIDTYSKCG-------NVDMARLVFQRMPGKKSIVSWTSMI 487
                +   + W     NA++    +CG       +     +VF  M   +   SW++MI
Sbjct: 171 FDEMSQPNVVAW-----NAVVTACFRCGMWRVLGVSFGWREVVFCEMK-MRDDASWSTMI 224

Query: 488 VGLAMQGYGEEALSLFNEMEQTGTIPDGVSVIAILYACSHAGLVEQGR------------ 631
           VG A  G   +A   F E+ +    P  VS+  +L AC+ AG  E G+            
Sbjct: 225 VGFAKSGSFHDAFGFFKELLRDRNRPSEVSLTGVLSACAQAGAFEFGKILHGFMEKAGFL 284

Query: 632 -------QVFDKITKVYLIKPEIEHYGCMVDLYGRAGQLLKAYDFITQMPIPPNAVIWRT 790
                   + D  +K   +      +   + ++GRA + ++ +  + +  + P+ V + +
Sbjct: 285 CIVSVNNALIDTYSKCGNVDMAKLVFNISLAMHGRADEAIRVFHEMEESGVRPDGVTFIS 344

Query: 791 LLGACSFYG 817
           LL ACS  G
Sbjct: 345 LLYACSHSG 353


>ref|XP_002511576.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550691|gb|EEF52178.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 438

 Score =  293 bits (749), Expect = 7e-77
 Identities = 142/208 (68%), Positives = 173/208 (83%)
 Frame = +2

Query: 5   FRCGDVKGAERVFNLMPAKNLASYNLMLAGYMKLGEFELARKVFEEMPMRDEVSWSTMIT 184
           FR GDVK A ++F+LM  ++L S+N+MLAGY+K+GE +LAR++F EM ++D+VSWSTMI 
Sbjct: 183 FRGGDVKEAGKMFSLMVFRDLTSWNVMLAGYVKIGELQLAREMFLEMAVKDDVSWSTMIV 242

Query: 185 GLAQDGCFNEAFEYFRKLHVVGMRPNEVSLTGVLSACAHSGALEFAKILHGFIEKVGLLW 364
           G A +GCF+EAF YFR+L   G RPNEVSLTGVLSACA +GA EF KILHGFIEK GLLW
Sbjct: 243 GFAHNGCFDEAFGYFRELLRKGTRPNEVSLTGVLSACAQAGAFEFGKILHGFIEKAGLLW 302

Query: 365 ITPVNNALIDTYSKCGNVDMARLVFQRMPGKKSIVSWTSMIVGLAMQGYGEEALSLFNEM 544
           I  VNNAL+DTYSKCGN+ MA+LVF+RMP KKSI+SWTSM+  LAM G GEEA+ LF+EM
Sbjct: 303 IISVNNALLDTYSKCGNLGMAQLVFERMPEKKSIISWTSMMACLAMHGLGEEAIKLFHEM 362

Query: 545 EQTGTIPDGVSVIAILYACSHAGLVEQG 628
           E+ GT PD ++ I +LYACSHAGLVEQG
Sbjct: 363 EEYGTRPDEITFILLLYACSHAGLVEQG 390



 Score = 92.4 bits (228), Expect = 2e-16
 Identities = 67/233 (28%), Positives = 113/233 (48%), Gaps = 1/233 (0%)
 Frame = +2

Query: 170 STMITGLAQDGCFNEAFEYFRKLHVVGMRPNEVSLTGVLSACAHSGAL-EFAKILHGFIE 346
           +T+I+   + GC   A + F ++H     PN ++   V++AC   G + E  K+    + 
Sbjct: 145 TTLISMYGECGCVGYARQVFGEMH----EPNVIAWNAVIAACFRGGDVKEAGKMFSLMVF 200

Query: 347 KVGLLWITPVNNALIDTYSKCGNVDMARLVFQRMPGKKSIVSWTSMIVGLAMQGYGEEAL 526
           +    W     N ++  Y K G + +AR +F  M  K   VSW++MIVG A  G  +EA 
Sbjct: 201 RDLTSW-----NVMLAGYVKIGELQLAREMFLEMAVKDD-VSWSTMIVGFAHNGCFDEAF 254

Query: 527 SLFNEMEQTGTIPDGVSVIAILYACSHAGLVEQGRQVFDKITKVYLIKPEIEHYGCMVDL 706
             F E+ + GT P+ VS+  +L AC+ AG  E G+ +   I K  L+   I     ++D 
Sbjct: 255 GYFRELLRKGTRPNEVSLTGVLSACAQAGAFEFGKILHGFIEKAGLLW-IISVNNALLDT 313

Query: 707 YGRAGQLLKAYDFITQMPIPPNAVIWRTLLGACSFYGDLKLAEQVKKRLSELD 865
           Y + G L  A     +MP   + + W +++   + +G   L E+  K   E++
Sbjct: 314 YSKCGNLGMAQLVFERMPEKKSIISWTSMMACLAMHG---LGEEAIKLFHEME 363


>gb|EOY33313.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao]
          Length = 509

 Score =  280 bits (715), Expect = 7e-73
 Identities = 138/289 (47%), Positives = 198/289 (68%)
 Frame = +2

Query: 2   FFRCGDVKGAERVFNLMPAKNLASYNLMLAGYMKLGEFELARKVFEEMPMRDEVSWSTMI 181
           + +CG VK A+ VF++M  KNL S+N M+ GYM+ GE+E A ++F+EMP RD +SW+ +I
Sbjct: 128 YAKCGHVKVAKLVFDVMRVKNLVSWNTMVDGYMRNGEYEKAVEIFDEMPQRDVISWTALI 187

Query: 182 TGLAQDGCFNEAFEYFRKLHVVGMRPNEVSLTGVLSACAHSGALEFAKILHGFIEKVGLL 361
            G A+ G   EA ++FR++ + G++P+ V +  VL+ACA+ GAL     +H F+ K    
Sbjct: 188 NGFARRGFHEEALDWFREMMIFGVKPDYVVIIAVLTACANLGALGVGLWIHRFVLKQSFR 247

Query: 362 WITPVNNALIDTYSKCGNVDMARLVFQRMPGKKSIVSWTSMIVGLAMQGYGEEALSLFNE 541
               VNN+LID YS+CG +++AR VF +M  K+++VSW S+IVG A+ G+ EEAL  F+ 
Sbjct: 248 DNVRVNNSLIDMYSRCGCIELAREVFDKMQ-KRTLVSWNSIIVGFAVNGFAEEALKYFDS 306

Query: 542 MEQTGTIPDGVSVIAILYACSHAGLVEQGRQVFDKITKVYLIKPEIEHYGCMVDLYGRAG 721
           M++ G  PDGVS    L ACSHAGLV++G + F  + +VY I P IEH+GC+VDLY RAG
Sbjct: 307 MQKEGFKPDGVSFTGALTACSHAGLVDEGLRYFGIMKRVYRISPRIEHFGCIVDLYSRAG 366

Query: 722 QLLKAYDFITQMPIPPNAVIWRTLLGACSFYGDLKLAEQVKKRLSELDP 868
           +L +A D I  MP+ PN V+  +LL AC  +GD+ LAE++ K L  LDP
Sbjct: 367 KLEEALDVIENMPMKPNEVVLGSLLAACRNHGDISLAERIVKNLVALDP 415



 Score =  101 bits (251), Expect = 4e-19
 Identities = 84/294 (28%), Positives = 128/294 (43%), Gaps = 70/294 (23%)
 Frame = +2

Query: 146 PMRDEVSWSTMITGLAQDGCFNEAFEYFRKLHVVGMRPNEVSLTGVLSACA----HSGAL 313
           P+   VSW++ I+   + G  +EA   F ++ +  + PN ++   +LS CA     SG L
Sbjct: 41  PLDHIVSWTSSISRHCRAGQISEAASEFTRMRLSEVEPNHITFVTLLSGCADFPLKSGVL 100

Query: 314 EFAKILHGFIEKVGL-LWITPVNNALIDTYSKCGNVDMARLVFQRMPGK----------- 457
               ++HG++ K+GL      V  AL++ Y+KCG+V +A+LVF  M  K           
Sbjct: 101 --GVLIHGYVCKLGLDKENVMVGTALVEMYAKCGHVKVAKLVFDVMRVKNLVSWNTMVDG 158

Query: 458 -------------------KSIVSWTSMIVGLAMQGYGEEALSLFNEMEQTGTIPDGVSV 580
                              + ++SWT++I G A +G+ EEAL  F EM   G  PD V +
Sbjct: 159 YMRNGEYEKAVEIFDEMPQRDVISWTALINGFARRGFHEEALDWFREMMIFGVKPDYVVI 218

Query: 581 IAILYAC-----------------------------------SHAGLVEQGRQVFDKITK 655
           IA+L AC                                   S  G +E  R+VFDK+ K
Sbjct: 219 IAVLTACANLGALGVGLWIHRFVLKQSFRDNVRVNNSLIDMYSRCGCIELAREVFDKMQK 278

Query: 656 VYLIKPEIEHYGCMVDLYGRAGQLLKAYDFITQMPIPPNAVIWRTLLGACSFYG 817
             L+       G  V+  G A + LK +D + +    P+ V +   L ACS  G
Sbjct: 279 RTLVSWNSIIVGFAVN--GFAEEALKYFDSMQKEGFKPDGVSFTGALTACSHAG 330