BLASTX nr result
ID: Rehmannia23_contig00032666
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia23_contig00032666 (402 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004173875.1| PREDICTED: DNA-directed RNA polymerase subun... 115 1e-38 ref|XP_003606056.1| 30S ribosomal protein S11 [Medicago truncatu... 114 9e-37 ref|XP_003590535.1| 30S ribosomal protein S11 [Medicago truncatu... 102 1e-33 ref|NP_783263.1| RNA polymerase alpha subunit [Atropa belladonna... 134 2e-29 ref|YP_008081297.1| RNA polymerase alpha subunit (chloroplast) [... 132 5e-29 ref|YP_008964066.1| RNA polymerase subunit alpha [Ajuga reptans]... 130 1e-28 gb|AFV61844.1| RNA polymerase alpha subunit (chloroplast) [Origa... 130 1e-28 gb|AGJ51282.1| RNA polymerase alpha subunit (chloroplast) [Solan... 130 1e-28 ref|XP_004228576.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 130 1e-28 ref|YP_007353946.1| RNA polymerase alpha subunit (chloroplast) [... 130 1e-28 ref|YP_008563120.1| RNA polymerase alpha subunit (chloroplast) [... 130 1e-28 ref|YP_538881.1| RNA polymerase alpha subunit [Solanum bulbocast... 130 1e-28 ref|NP_054532.1| RNA polymerase alpha subunit [Nicotiana tabacum... 130 1e-28 ref|YP_006666062.1| RNA polymerase alpha subunit (chloroplast) [... 130 1e-28 ref|YP_006503823.1| RNA polymerase alpha subunit (chloroplast) [... 130 1e-28 ref|YP_004935698.1| rpoA gene product (chloroplast) [Sesamum ind... 130 1e-28 ref|YP_004891639.1| rpoA gene product (chloroplast) [Nicotiana u... 130 1e-28 gb|ADD31211.1| RNA polymerase alpha subunit protein [Antirrhinum... 130 1e-28 gb|AGW99001.1| RNA polymerase alpha subunit (chloroplast) [Turbi... 130 2e-28 gb|AGW98917.1| RNA polymerase alpha subunit (chloroplast) [Stict... 130 2e-28 >ref|XP_004173875.1| PREDICTED: DNA-directed RNA polymerase subunit alpha-like [Cucumis sativus] Length = 466 Score = 115 bits (289), Expect(2) = 1e-38 Identities = 56/66 (84%), Positives = 60/66 (90%) Frame = +1 Query: 205 REKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTSI 384 R+K+ VSTRTL+WKCVESR DSKRLYYGRFILSPLMKGQ DTIGIAMR+ALLGEIEGT I Sbjct: 136 RQKIRVSTRTLKWKCVESRADSKRLYYGRFILSPLMKGQGDTIGIAMRKALLGEIEGTCI 195 Query: 385 TRVKFE 402 TR K E Sbjct: 196 TRAKSE 201 Score = 69.7 bits (169), Expect(2) = 1e-38 Identities = 31/33 (93%), Positives = 33/33 (100%) Frame = +2 Query: 2 PGLGRDAALRAIRRSGILLTFVRDVTPMPHNGC 100 PGLGRDAALRAIRRSGILL+F+RDVTPMPHNGC Sbjct: 98 PGLGRDAALRAIRRSGILLSFIRDVTPMPHNGC 130 >ref|XP_003606056.1| 30S ribosomal protein S11 [Medicago truncatula] gi|355507111|gb|AES88253.1| 30S ribosomal protein S11 [Medicago truncatula] Length = 466 Score = 114 bits (285), Expect(2) = 9e-37 Identities = 57/66 (86%), Positives = 58/66 (87%) Frame = +1 Query: 205 REKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTSI 384 R+KV VS RTLQWKCVESR DSKRLYYGRFILSPL KGQADTIGIAMRR LLGEIEGT I Sbjct: 136 RQKVKVSARTLQWKCVESRVDSKRLYYGRFILSPLRKGQADTIGIAMRRILLGEIEGTCI 195 Query: 385 TRVKFE 402 TR K E Sbjct: 196 TRAKSE 201 Score = 65.1 bits (157), Expect(2) = 9e-37 Identities = 29/33 (87%), Positives = 31/33 (93%) Frame = +2 Query: 2 PGLGRDAALRAIRRSGILLTFVRDVTPMPHNGC 100 PGLGRDAALRAI RSGILL F+RDVTP+PHNGC Sbjct: 98 PGLGRDAALRAIARSGILLRFIRDVTPIPHNGC 130 >ref|XP_003590535.1| 30S ribosomal protein S11 [Medicago truncatula] gi|355479583|gb|AES60786.1| 30S ribosomal protein S11 [Medicago truncatula] Length = 233 Score = 102 bits (255), Expect(2) = 1e-33 Identities = 52/66 (78%), Positives = 54/66 (81%) Frame = +1 Query: 205 REKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGTSI 384 R+KV VSTRTLQWKCVESR DSK LYYGRFIL+PL K QA IGIAMRR L GEIEGT I Sbjct: 71 RQKVKVSTRTLQWKCVESRVDSKCLYYGRFILTPLRKDQAHIIGIAMRRILFGEIEGTCI 130 Query: 385 TRVKFE 402 TR K E Sbjct: 131 TRAKSE 136 Score = 66.2 bits (160), Expect(2) = 1e-33 Identities = 30/33 (90%), Positives = 31/33 (93%) Frame = +2 Query: 2 PGLGRDAALRAIRRSGILLTFVRDVTPMPHNGC 100 PGLGRDAALRAIRRSGILL F+ DVTPMPHNGC Sbjct: 33 PGLGRDAALRAIRRSGILLRFIGDVTPMPHNGC 65 >ref|NP_783263.1| RNA polymerase alpha subunit [Atropa belladonna] gi|41688712|sp|Q8S8V9.1|RPOA_ATRBE RecName: Full=DNA-directed RNA polymerase subunit alpha; Short=PEP; AltName: Full=Plastid-encoded RNA polymerase subunit alpha; Short=RNA polymerase subunit alpha gi|20068363|emb|CAC88076.1| RNA polymerase alpha subunit [Atropa belladonna] Length = 337 Score = 134 bits (336), Expect = 2e-29 Identities = 67/68 (98%), Positives = 67/68 (98%) Frame = +1 Query: 199 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 378 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60 Query: 379 SITRVKFE 402 ITRVKFE Sbjct: 61 CITRVKFE 68 >ref|YP_008081297.1| RNA polymerase alpha subunit (chloroplast) [Catharanthus roseus] gi|474452108|gb|AGI51176.1| RNA polymerase alpha subunit (chloroplast) [Catharanthus roseus] Length = 335 Score = 132 bits (332), Expect = 5e-29 Identities = 65/68 (95%), Positives = 67/68 (98%) Frame = +1 Query: 199 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 378 MVREK+TVSTRTLQWKCVESRTD+KRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT Sbjct: 1 MVREKITVSTRTLQWKCVESRTDNKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60 Query: 379 SITRVKFE 402 ITRVKFE Sbjct: 61 CITRVKFE 68 >ref|YP_008964066.1| RNA polymerase subunit alpha [Ajuga reptans] gi|558697182|gb|AHA84937.1| RNA polymerase subunit alpha [Ajuga reptans] Length = 337 Score = 130 bits (328), Expect = 1e-28 Identities = 66/68 (97%), Positives = 66/68 (97%) Frame = +1 Query: 199 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 378 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60 Query: 379 SITRVKFE 402 ITRVK E Sbjct: 61 CITRVKSE 68 >gb|AFV61844.1| RNA polymerase alpha subunit (chloroplast) [Origanum vulgare subsp. vulgare] Length = 335 Score = 130 bits (328), Expect = 1e-28 Identities = 66/68 (97%), Positives = 66/68 (97%) Frame = +1 Query: 199 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 378 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60 Query: 379 SITRVKFE 402 ITRVK E Sbjct: 61 CITRVKSE 68 >gb|AGJ51282.1| RNA polymerase alpha subunit (chloroplast) [Solanum carolinense] Length = 337 Score = 130 bits (328), Expect = 1e-28 Identities = 66/68 (97%), Positives = 66/68 (97%) Frame = +1 Query: 199 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 378 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60 Query: 379 SITRVKFE 402 ITRVK E Sbjct: 61 CITRVKSE 68 >ref|XP_004228576.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase subunit alpha-like [Solanum lycopersicum] Length = 337 Score = 130 bits (328), Expect = 1e-28 Identities = 66/68 (97%), Positives = 66/68 (97%) Frame = +1 Query: 199 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 378 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60 Query: 379 SITRVKFE 402 ITRVK E Sbjct: 61 CITRVKSE 68 >ref|YP_007353946.1| RNA polymerase alpha subunit (chloroplast) [Tectona grandis] gi|438687635|emb|CCP47162.1| RNA polymerase alpha subunit (chloroplast) [Tectona grandis] gi|438688319|emb|CCP47251.1| RNA polymerase alpha subunit (chloroplast) [Tectona grandis] gi|438688443|emb|CCP47340.1| RNA polymerase alpha subunit (chloroplast) [Tectona grandis] Length = 337 Score = 130 bits (328), Expect = 1e-28 Identities = 66/68 (97%), Positives = 66/68 (97%) Frame = +1 Query: 199 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 378 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60 Query: 379 SITRVKFE 402 ITRVK E Sbjct: 61 CITRVKSE 68 >ref|YP_008563120.1| RNA polymerase alpha subunit (chloroplast) [Solanum lycopersicum] gi|544170704|ref|AP_004960.1| RNA polymerase alpha chain (chloroplast) [Solanum lycopersicum] gi|109900622|sp|Q2MI69.1|RPOA_SOLLC RecName: Full=DNA-directed RNA polymerase subunit alpha; Short=PEP; AltName: Full=Plastid-encoded RNA polymerase subunit alpha; Short=RNA polymerase subunit alpha gi|84372014|gb|ABC56331.1| RNA polymerase alpha subunit (chloroplast) [Solanum lycopersicum] gi|89241703|emb|CAJ32426.1| RNA polymerase alpha chain [Solanum lycopersicum] Length = 337 Score = 130 bits (328), Expect = 1e-28 Identities = 66/68 (97%), Positives = 66/68 (97%) Frame = +1 Query: 199 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 378 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60 Query: 379 SITRVKFE 402 ITRVK E Sbjct: 61 CITRVKSE 68 >ref|YP_538881.1| RNA polymerase alpha subunit [Solanum bulbocastanum] gi|108773161|ref|YP_635671.1| RNA polymerase alpha subunit [Solanum tuberosum] gi|565356831|ref|XP_006345266.1| PREDICTED: DNA-directed RNA polymerase subunit alpha-like [Solanum tuberosum] gi|90110868|sp|Q2VEE8.1|RPOA_SOLTU RecName: Full=DNA-directed RNA polymerase subunit alpha; Short=PEP; AltName: Full=Plastid-encoded RNA polymerase subunit alpha; Short=RNA polymerase subunit alpha gi|109900624|sp|Q2MIF6.1|RPOA_SOLBU RecName: Full=DNA-directed RNA polymerase subunit alpha; Short=PEP; AltName: Full=Plastid-encoded RNA polymerase subunit alpha; Short=RNA polymerase subunit alpha gi|82754657|gb|ABB90071.1| RNA polymerase alpha chain [Solanum tuberosum] gi|84371926|gb|ABC56244.1| RNA polymerase alpha subunit [Solanum bulbocastanum] gi|88656835|gb|ABD47088.1| RNA polymerase alpha subunit [Solanum tuberosum] gi|329124614|gb|AEB72171.1| RNA polymerase alpha subunit (chloroplast) [Solanum tuberosum] gi|329124701|gb|AEB72257.1| RNA polymerase alpha subunit (chloroplast) [Solanum tuberosum] Length = 337 Score = 130 bits (328), Expect = 1e-28 Identities = 66/68 (97%), Positives = 66/68 (97%) Frame = +1 Query: 199 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 378 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60 Query: 379 SITRVKFE 402 ITRVK E Sbjct: 61 CITRVKSE 68 >ref|NP_054532.1| RNA polymerase alpha subunit [Nicotiana tabacum] gi|78102570|ref|YP_358710.1| RNA polymerase alpha subunit [Nicotiana sylvestris] gi|133409|sp|P06269.1|RPOA_TOBAC RecName: Full=DNA-directed RNA polymerase subunit alpha; Short=PEP; AltName: Full=Plastid-encoded RNA polymerase subunit alpha; Short=RNA polymerase subunit alpha gi|90110850|sp|Q3C1M3.1|RPOA_NICSY RecName: Full=DNA-directed RNA polymerase subunit alpha; Short=PEP; AltName: Full=Plastid-encoded RNA polymerase subunit alpha; Short=RNA polymerase subunit alpha gi|11860|emb|CAA77376.1| RNA polymerase alpha subunit [Nicotiana tabacum] gi|10442805|gb|AAG15578.1| RNA polymerase alpha subunit [synthetic construct] gi|77799597|dbj|BAE46686.1| RNA polymerase alpha subunit [Nicotiana sylvestris] gi|225228|prf||1211235BK RNA polymerase alpha Length = 337 Score = 130 bits (328), Expect = 1e-28 Identities = 66/68 (97%), Positives = 66/68 (97%) Frame = +1 Query: 199 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 378 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60 Query: 379 SITRVKFE 402 ITRVK E Sbjct: 61 CITRVKSE 68 >ref|YP_006666062.1| RNA polymerase alpha subunit (chloroplast) [Capsicum annuum] gi|401065964|gb|AFP90808.1| RNA polymerase alpha subunit (chloroplast) [Capsicum annuum] Length = 337 Score = 130 bits (328), Expect = 1e-28 Identities = 66/68 (97%), Positives = 66/68 (97%) Frame = +1 Query: 199 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 378 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60 Query: 379 SITRVKFE 402 ITRVK E Sbjct: 61 CITRVKSE 68 >ref|YP_006503823.1| RNA polymerase alpha subunit (chloroplast) [Datura stramonium] gi|350996458|gb|AEQ36970.1| RNA polymerase alpha subunit (chloroplast) [Datura stramonium] gi|350996544|gb|AEQ37055.1| RNA polymerase alpha subunit [Datura stramonium] Length = 337 Score = 130 bits (328), Expect = 1e-28 Identities = 66/68 (97%), Positives = 66/68 (97%) Frame = +1 Query: 199 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 378 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60 Query: 379 SITRVKFE 402 ITRVK E Sbjct: 61 CITRVKSE 68 >ref|YP_004935698.1| rpoA gene product (chloroplast) [Sesamum indicum] gi|347448327|gb|AEO92738.1| RNA polymerase alpha subunit (chloroplast) [Sesamum indicum] gi|496538633|gb|AGL45368.1| RpoA (chloroplast) [Sesamum indicum] Length = 337 Score = 130 bits (328), Expect = 1e-28 Identities = 66/68 (97%), Positives = 66/68 (97%) Frame = +1 Query: 199 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 378 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60 Query: 379 SITRVKFE 402 ITRVK E Sbjct: 61 CITRVKSE 68 >ref|YP_004891639.1| rpoA gene product (chloroplast) [Nicotiana undulata] gi|347453943|gb|AEO95601.1| RNA polymerase alpha subunit (chloroplast) [Nicotiana undulata] gi|347454054|gb|AEO95711.1| RNA polymerase alpha subunit [synthetic construct] Length = 337 Score = 130 bits (328), Expect = 1e-28 Identities = 66/68 (97%), Positives = 66/68 (97%) Frame = +1 Query: 199 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 378 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60 Query: 379 SITRVKFE 402 ITRVK E Sbjct: 61 CITRVKSE 68 >gb|ADD31211.1| RNA polymerase alpha subunit protein [Antirrhinum majus] Length = 336 Score = 130 bits (328), Expect = 1e-28 Identities = 66/68 (97%), Positives = 66/68 (97%) Frame = +1 Query: 199 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 378 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT Sbjct: 1 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60 Query: 379 SITRVKFE 402 ITRVK E Sbjct: 61 CITRVKSE 68 >gb|AGW99001.1| RNA polymerase alpha subunit (chloroplast) [Turbina corymbosa] Length = 337 Score = 130 bits (327), Expect = 2e-28 Identities = 65/68 (95%), Positives = 66/68 (97%) Frame = +1 Query: 199 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 378 M+REKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT Sbjct: 1 MIREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60 Query: 379 SITRVKFE 402 ITRVK E Sbjct: 61 CITRVKSE 68 >gb|AGW98917.1| RNA polymerase alpha subunit (chloroplast) [Stictocardia macalusoi] Length = 337 Score = 130 bits (327), Expect = 2e-28 Identities = 65/68 (95%), Positives = 66/68 (97%) Frame = +1 Query: 199 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 378 M+REKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT Sbjct: 1 MIREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60 Query: 379 SITRVKFE 402 ITRVK E Sbjct: 61 CITRVKSE 68