BLASTX nr result
ID: Rehmannia23_contig00032598
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00032598
(359 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006347313.1| PREDICTED: ribosome-binding factor PSRP1, ch... 120 1e-25
gb|ACV83721.1| chloroplast ribosomal protein [Solanum tuberosum] 120 2e-25
ref|NP_001233834.1| chloroplast-specific ribosomal protein [Sola... 120 2e-25
gb|EPS59457.1| hypothetical protein M569_15350, partial [Genlise... 109 3e-22
ref|XP_006376595.1| hypothetical protein POPTR_0012s00590g [Popu... 108 1e-21
ref|XP_006376594.1| hypothetical protein POPTR_0012s00590g [Popu... 108 1e-21
ref|XP_002317839.1| 30S ribosomal family protein [Populus tricho... 108 1e-21
ref|XP_002524427.1| Plastid-specific 30S ribosomal protein 1, ch... 107 2e-21
gb|EXB78385.1| 30S ribosomal protein 1 [Morus notabilis] 103 2e-20
ref|XP_003634154.1| PREDICTED: 30S ribosomal protein 1, chloropl... 103 3e-20
ref|XP_006288304.1| hypothetical protein CARUB_v10001549mg [Caps... 102 4e-20
gb|EOY23705.1| Plastid-specific 30S ribosomal protein 1 [Theobro... 102 5e-20
ref|XP_006394705.1| hypothetical protein EUTSA_v10004495mg [Eutr... 102 7e-20
ref|XP_004170169.1| PREDICTED: LOW QUALITY PROTEIN: ribosome-bin... 102 7e-20
ref|XP_004147328.1| PREDICTED: ribosome-binding factor PSRP1, ch... 102 7e-20
ref|XP_004307913.1| PREDICTED: ribosome-binding factor PSRP1, ch... 101 9e-20
ref|XP_003526761.1| PREDICTED: ribosome-binding factor PSRP1, ch... 101 1e-19
gb|ACU20696.1| unknown [Glycine max] 100 2e-19
ref|XP_006493202.1| PREDICTED: ribosome-binding factor PSRP1, ch... 100 3e-19
ref|XP_006441240.1| hypothetical protein CICLE_v10021260mg [Citr... 100 3e-19
>ref|XP_006347313.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Solanum
tuberosum]
Length = 312
Score = 120 bits (302), Expect = 1e-25
Identities = 64/90 (71%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
Frame = -2
Query: 268 SFSSLNSSFMGLCLKSHEMGF-VENGSKKSSGVKMSWDGSLSSVKLILQGKNLELTPTVK 92
+ SS NS F+ K +E+ V N K S GV+MSWDG LSSVKLILQGKNLELTP VK
Sbjct: 42 TLSSSNSGFLNSAFKKNEINVPVRNRVKNSFGVRMSWDGPLSSVKLILQGKNLELTPAVK 101
Query: 91 SYVEEKLGKAVQKHSHLVREVDVRLYVRGG 2
YVEEKLGKAVQKHSHL REVDVRL VRGG
Sbjct: 102 DYVEEKLGKAVQKHSHLAREVDVRLSVRGG 131
>gb|ACV83721.1| chloroplast ribosomal protein [Solanum tuberosum]
Length = 280
Score = 120 bits (301), Expect = 2e-25
Identities = 64/90 (71%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
Frame = -2
Query: 268 SFSSLNSSFMGLCLKSHEMGF-VENGSKKSSGVKMSWDGSLSSVKLILQGKNLELTPTVK 92
+ SS NS F+ K +E+ V N K S GV+MSWDG LSSVKLILQGKNLELTP VK
Sbjct: 14 TLSSSNSGFLNSAFKKNEINVPVRNRVKXSFGVRMSWDGPLSSVKLILQGKNLELTPAVK 73
Query: 91 SYVEEKLGKAVQKHSHLVREVDVRLYVRGG 2
YVEEKLGKAVQKHSHL REVDVRL VRGG
Sbjct: 74 DYVEEKLGKAVQKHSHLAREVDVRLSVRGG 103
>ref|NP_001233834.1| chloroplast-specific ribosomal protein [Solanum lycopersicum]
gi|51457950|gb|AAU03364.1| chloroplast-specific
ribosomal protein [Solanum lycopersicum]
Length = 311
Score = 120 bits (300), Expect = 2e-25
Identities = 64/90 (71%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
Frame = -2
Query: 268 SFSSLNSSFMGLCLKSHEMGF-VENGSKKSSGVKMSWDGSLSSVKLILQGKNLELTPTVK 92
+ SS NS F+ K +E+ V N KS GV+MSWDG LSSVKLILQGKNLELTP VK
Sbjct: 42 TLSSTNSRFLNSAFKMNEINVPVRNRVTKSFGVRMSWDGPLSSVKLILQGKNLELTPAVK 101
Query: 91 SYVEEKLGKAVQKHSHLVREVDVRLYVRGG 2
YVEEKLGKAVQKHSHL REVDVRL VRGG
Sbjct: 102 DYVEEKLGKAVQKHSHLAREVDVRLSVRGG 131
>gb|EPS59457.1| hypothetical protein M569_15350, partial [Genlisea aurea]
Length = 216
Score = 109 bits (273), Expect = 3e-22
Identities = 53/62 (85%), Positives = 58/62 (93%)
Frame = -2
Query: 187 KSSGVKMSWDGSLSSVKLILQGKNLELTPTVKSYVEEKLGKAVQKHSHLVREVDVRLYVR 8
+ SG++MSWDG LSSVKLILQGKN EL+PTVK+YVEEKLGKAVQKHSHLVREVDVRL VR
Sbjct: 1 RCSGIRMSWDGPLSSVKLILQGKNFELSPTVKNYVEEKLGKAVQKHSHLVREVDVRLSVR 60
Query: 7 GG 2
GG
Sbjct: 61 GG 62
>ref|XP_006376595.1| hypothetical protein POPTR_0012s00590g [Populus trichocarpa]
gi|550326079|gb|ERP54392.1| hypothetical protein
POPTR_0012s00590g [Populus trichocarpa]
Length = 232
Score = 108 bits (269), Expect = 1e-21
Identities = 60/99 (60%), Positives = 69/99 (69%), Gaps = 2/99 (2%)
Frame = -2
Query: 292 ISKTRQPFSFSSLNSSFMGLCLKSHEMGFVENGSKKSSG--VKMSWDGSLSSVKLILQGK 119
+ T+ SSL SSF+G + E+G G VKMSWDG L SVKLI+QGK
Sbjct: 34 VISTKTQIPKSSLKSSFLGKNMSFIELGRTARTPLTHGGCSVKMSWDGPLHSVKLIIQGK 93
Query: 118 NLELTPTVKSYVEEKLGKAVQKHSHLVREVDVRLYVRGG 2
NLELT TVK +VE+K+GKAVQKHSHLVREVDVRL VRGG
Sbjct: 94 NLELTDTVKRHVEDKVGKAVQKHSHLVREVDVRLSVRGG 132
>ref|XP_006376594.1| hypothetical protein POPTR_0012s00590g [Populus trichocarpa]
gi|550326078|gb|ERP54391.1| hypothetical protein
POPTR_0012s00590g [Populus trichocarpa]
Length = 242
Score = 108 bits (269), Expect = 1e-21
Identities = 60/99 (60%), Positives = 69/99 (69%), Gaps = 2/99 (2%)
Frame = -2
Query: 292 ISKTRQPFSFSSLNSSFMGLCLKSHEMGFVENGSKKSSG--VKMSWDGSLSSVKLILQGK 119
+ T+ SSL SSF+G + E+G G VKMSWDG L SVKLI+QGK
Sbjct: 34 VISTKTQIPKSSLKSSFLGKNMSFIELGRTARTPLTHGGCSVKMSWDGPLHSVKLIIQGK 93
Query: 118 NLELTPTVKSYVEEKLGKAVQKHSHLVREVDVRLYVRGG 2
NLELT TVK +VE+K+GKAVQKHSHLVREVDVRL VRGG
Sbjct: 94 NLELTDTVKRHVEDKVGKAVQKHSHLVREVDVRLSVRGG 132
>ref|XP_002317839.1| 30S ribosomal family protein [Populus trichocarpa]
gi|222858512|gb|EEE96059.1| 30S ribosomal family protein
[Populus trichocarpa]
Length = 306
Score = 108 bits (269), Expect = 1e-21
Identities = 60/99 (60%), Positives = 69/99 (69%), Gaps = 2/99 (2%)
Frame = -2
Query: 292 ISKTRQPFSFSSLNSSFMGLCLKSHEMGFVENGSKKSSG--VKMSWDGSLSSVKLILQGK 119
+ T+ SSL SSF+G + E+G G VKMSWDG L SVKLI+QGK
Sbjct: 34 VISTKTQIPKSSLKSSFLGKNMSFIELGRTARTPLTHGGCSVKMSWDGPLHSVKLIIQGK 93
Query: 118 NLELTPTVKSYVEEKLGKAVQKHSHLVREVDVRLYVRGG 2
NLELT TVK +VE+K+GKAVQKHSHLVREVDVRL VRGG
Sbjct: 94 NLELTDTVKRHVEDKVGKAVQKHSHLVREVDVRLSVRGG 132
>ref|XP_002524427.1| Plastid-specific 30S ribosomal protein 1, chloroplast precursor,
putative [Ricinus communis] gi|223536311|gb|EEF37962.1|
Plastid-specific 30S ribosomal protein 1, chloroplast
precursor, putative [Ricinus communis]
Length = 311
Score = 107 bits (266), Expect = 2e-21
Identities = 57/95 (60%), Positives = 67/95 (70%)
Frame = -2
Query: 286 KTRQPFSFSSLNSSFMGLCLKSHEMGFVENGSKKSSGVKMSWDGSLSSVKLILQGKNLEL 107
K R P S +SF+ + + EN + S V+MSW+G LSSVKLI QGKNLEL
Sbjct: 40 KLRLPSFSLSSKTSFLNPLKLGSNVKYFENKRGRRSAVRMSWEGPLSSVKLITQGKNLEL 99
Query: 106 TPTVKSYVEEKLGKAVQKHSHLVREVDVRLYVRGG 2
T TVK +VE+K+GKAVQKHSHLVREVDVRL VRGG
Sbjct: 100 TDTVKKHVEDKVGKAVQKHSHLVREVDVRLSVRGG 134
>gb|EXB78385.1| 30S ribosomal protein 1 [Morus notabilis]
Length = 334
Score = 103 bits (258), Expect = 2e-20
Identities = 58/96 (60%), Positives = 71/96 (73%), Gaps = 4/96 (4%)
Frame = -2
Query: 277 QPFSFSSLNSSFMGLC--LKSHEMGFVENGSKKSS--GVKMSWDGSLSSVKLILQGKNLE 110
Q S +S +S+F+ C LK+ + + + + V+MSWDG LSSVKLI+QGKNLE
Sbjct: 46 QILSLTSKSSTFLNPCKILKTVSVEIMPRNKCRGNFRSVRMSWDGPLSSVKLIIQGKNLE 105
Query: 109 LTPTVKSYVEEKLGKAVQKHSHLVREVDVRLYVRGG 2
LT TVKS+VEEK+GKAV KHSHLVREVDVRL VRGG
Sbjct: 106 LTETVKSHVEEKVGKAVVKHSHLVREVDVRLSVRGG 141
>ref|XP_003634154.1| PREDICTED: 30S ribosomal protein 1, chloroplastic-like [Vitis
vinifera]
Length = 298
Score = 103 bits (256), Expect = 3e-20
Identities = 51/62 (82%), Positives = 56/62 (90%)
Frame = -2
Query: 187 KSSGVKMSWDGSLSSVKLILQGKNLELTPTVKSYVEEKLGKAVQKHSHLVREVDVRLYVR 8
K V+MSWDG LSSVKLILQGKNLELT TV+S+VEEK+GKAVQKHSHLVREVDVRL +R
Sbjct: 63 KPLAVRMSWDGPLSSVKLILQGKNLELTDTVRSHVEEKVGKAVQKHSHLVREVDVRLSIR 122
Query: 7 GG 2
GG
Sbjct: 123 GG 124
>ref|XP_006288304.1| hypothetical protein CARUB_v10001549mg [Capsella rubella]
gi|482557010|gb|EOA21202.1| hypothetical protein
CARUB_v10001549mg [Capsella rubella]
Length = 306
Score = 102 bits (255), Expect = 4e-20
Identities = 53/85 (62%), Positives = 61/85 (71%)
Frame = -2
Query: 256 LNSSFMGLCLKSHEMGFVENGSKKSSGVKMSWDGSLSSVKLILQGKNLELTPTVKSYVEE 77
L S F+G K SS VKMSWDG L+SVKLI+QGKNLEL+ +K +VEE
Sbjct: 44 LRSDFLGYMGYDDRRQVRPGSCKSSSAVKMSWDGPLASVKLIIQGKNLELSEPIKQHVEE 103
Query: 76 KLGKAVQKHSHLVREVDVRLYVRGG 2
K+GK+VQKHSHLVREVDVRL VRGG
Sbjct: 104 KVGKSVQKHSHLVREVDVRLSVRGG 128
>gb|EOY23705.1| Plastid-specific 30S ribosomal protein 1 [Theobroma cacao]
Length = 320
Score = 102 bits (254), Expect = 5e-20
Identities = 62/100 (62%), Positives = 71/100 (71%), Gaps = 4/100 (4%)
Frame = -2
Query: 289 SKTRQPFSFSSLNSSFMGLCLKSHEMGFVENGSKKSS----GVKMSWDGSLSSVKLILQG 122
+K R P S S SSF+ S + +E +KS V+MSWDG LSSVKLI+QG
Sbjct: 40 TKPRIP-SLPSYKSSFLNPIGNSFKD--IETEPRKSRVCSLTVRMSWDGPLSSVKLIIQG 96
Query: 121 KNLELTPTVKSYVEEKLGKAVQKHSHLVREVDVRLYVRGG 2
KNLELT TVK +VEEK+GKAVQKHSHLVREVDVRL VRGG
Sbjct: 97 KNLELTDTVKQHVEEKVGKAVQKHSHLVREVDVRLSVRGG 136
>ref|XP_006394705.1| hypothetical protein EUTSA_v10004495mg [Eutrema salsugineum]
gi|557091344|gb|ESQ31991.1| hypothetical protein
EUTSA_v10004495mg [Eutrema salsugineum]
Length = 352
Score = 102 bits (253), Expect = 7e-20
Identities = 57/104 (54%), Positives = 71/104 (68%), Gaps = 4/104 (3%)
Frame = -2
Query: 301 MVRISKTRQPFSFSSLNSSFMGLCLKSHEM----GFVENGSKKSSGVKMSWDGSLSSVKL 134
MV S+T ++L S F+G G + G ++S VKMSWDG L+SVKL
Sbjct: 73 MVSSSRTES----NTLRSGFLGRVAYDDRRQVGSGSCKLGRRRSLAVKMSWDGPLASVKL 128
Query: 133 ILQGKNLELTPTVKSYVEEKLGKAVQKHSHLVREVDVRLYVRGG 2
I+QGKNLEL+ +K +VEEK+GK+VQKHSHLVREVDVRL VRGG
Sbjct: 129 IIQGKNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGG 172
>ref|XP_004170169.1| PREDICTED: LOW QUALITY PROTEIN: ribosome-binding factor PSRP1,
chloroplastic-like [Cucumis sativus]
Length = 310
Score = 102 bits (253), Expect = 7e-20
Identities = 56/94 (59%), Positives = 66/94 (70%), Gaps = 5/94 (5%)
Frame = -2
Query: 268 SFSSLNSSFMGLCLKSHEMGFVENGSKK-----SSGVKMSWDGSLSSVKLILQGKNLELT 104
+ SS S+F C G +E S+ S ++M+WDG LSSVKLI+QGKNLELT
Sbjct: 46 ALSSNASAFFNSC---KNFGTIETASRNRHASNSFSIRMTWDGPLSSVKLIVQGKNLELT 102
Query: 103 PTVKSYVEEKLGKAVQKHSHLVREVDVRLYVRGG 2
VK +VEEK+GKAVQKHSHLVREVDVRL VRGG
Sbjct: 103 EAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGG 136
>ref|XP_004147328.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic-like
[Cucumis sativus]
Length = 310
Score = 102 bits (253), Expect = 7e-20
Identities = 56/94 (59%), Positives = 66/94 (70%), Gaps = 5/94 (5%)
Frame = -2
Query: 268 SFSSLNSSFMGLCLKSHEMGFVENGSKK-----SSGVKMSWDGSLSSVKLILQGKNLELT 104
+ SS S+F C G +E S+ S ++M+WDG LSSVKLI+QGKNLELT
Sbjct: 46 ALSSNASAFFNSC---KNFGTIETASRNRHASNSFSIRMTWDGPLSSVKLIVQGKNLELT 102
Query: 103 PTVKSYVEEKLGKAVQKHSHLVREVDVRLYVRGG 2
VK +VEEK+GKAVQKHSHLVREVDVRL VRGG
Sbjct: 103 EAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGG 136
>ref|XP_004307913.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 279
Score = 101 bits (252), Expect = 9e-20
Identities = 54/92 (58%), Positives = 62/92 (67%)
Frame = -2
Query: 277 QPFSFSSLNSSFMGLCLKSHEMGFVENGSKKSSGVKMSWDGSLSSVKLILQGKNLELTPT 98
Q SS S+F+ C + K GVKMSWDG LSSVKLI+QGK+LELT
Sbjct: 17 QSSKLSSDFSNFLNPCQNLRPISISIRPRSKEHGVKMSWDGPLSSVKLIIQGKHLELTEP 76
Query: 97 VKSYVEEKLGKAVQKHSHLVREVDVRLYVRGG 2
VK +VEEK+GKA+ KHSHLVRE DVRL VRGG
Sbjct: 77 VKKHVEEKVGKAILKHSHLVREADVRLSVRGG 108
>ref|XP_003526761.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Glycine
max]
Length = 291
Score = 101 bits (251), Expect = 1e-19
Identities = 51/91 (56%), Positives = 66/91 (72%)
Frame = -2
Query: 274 PFSFSSLNSSFMGLCLKSHEMGFVENGSKKSSGVKMSWDGSLSSVKLILQGKNLELTPTV 95
P ++L+++F+G + + +S +MSWDG LSSVKLI+QGKNLELT V
Sbjct: 26 PHFSNTLSTTFLGHIVTLKYAATSTSNRGRSLSTRMSWDGPLSSVKLIIQGKNLELTDAV 85
Query: 94 KSYVEEKLGKAVQKHSHLVREVDVRLYVRGG 2
K +VE+K+GKAVQKHSHLVREVDVRL +RGG
Sbjct: 86 KQHVEDKVGKAVQKHSHLVREVDVRLSIRGG 116
>gb|ACU20696.1| unknown [Glycine max]
Length = 208
Score = 100 bits (250), Expect = 2e-19
Identities = 51/91 (56%), Positives = 66/91 (72%)
Frame = -2
Query: 274 PFSFSSLNSSFMGLCLKSHEMGFVENGSKKSSGVKMSWDGSLSSVKLILQGKNLELTPTV 95
P ++L+++F+G + + +S +MSWDG LSSVKLI+QGKNLELT V
Sbjct: 26 PHFSNTLSTTFLGHIVTLKYAATSTSNRGRSLSTRMSWDGPLSSVKLIIQGKNLELTDAV 85
Query: 94 KSYVEEKLGKAVQKHSHLVREVDVRLYVRGG 2
K +VE+K+GKAVQKHSHLVREVDVRL +RGG
Sbjct: 86 KRHVEDKVGKAVQKHSHLVREVDVRLSIRGG 116
>ref|XP_006493202.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic-like
[Citrus sinensis]
Length = 319
Score = 100 bits (248), Expect = 3e-19
Identities = 57/86 (66%), Positives = 65/86 (75%)
Frame = -2
Query: 259 SLNSSFMGLCLKSHEMGFVENGSKKSSGVKMSWDGSLSSVKLILQGKNLELTPTVKSYVE 80
S NSSF G + M + +K V+MSWDG LSSVKLI+QGKNLELT TVK++VE
Sbjct: 61 SYNSSFFGPFKQITVMRPTKVHTKPLP-VRMSWDGPLSSVKLIIQGKNLELTDTVKNHVE 119
Query: 79 EKLGKAVQKHSHLVREVDVRLYVRGG 2
EK+GKAV KHSHLVREVDVRL VRGG
Sbjct: 120 EKVGKAVLKHSHLVREVDVRLSVRGG 145
>ref|XP_006441240.1| hypothetical protein CICLE_v10021260mg [Citrus clementina]
gi|557543502|gb|ESR54480.1| hypothetical protein
CICLE_v10021260mg [Citrus clementina]
Length = 313
Score = 100 bits (248), Expect = 3e-19
Identities = 57/86 (66%), Positives = 65/86 (75%)
Frame = -2
Query: 259 SLNSSFMGLCLKSHEMGFVENGSKKSSGVKMSWDGSLSSVKLILQGKNLELTPTVKSYVE 80
S NSSF G + M + +K V+MSWDG LSSVKLI+QGKNLELT TVK++VE
Sbjct: 55 SYNSSFFGPFKQITVMRPTKVHTKPLP-VRMSWDGPLSSVKLIIQGKNLELTDTVKNHVE 113
Query: 79 EKLGKAVQKHSHLVREVDVRLYVRGG 2
EK+GKAV KHSHLVREVDVRL VRGG
Sbjct: 114 EKVGKAVLKHSHLVREVDVRLSVRGG 139