BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00032439
         (446 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlise...   173   2e-41
gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum ma...   167   1e-39
ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV su...   114   1e-23
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su...   114   1e-23
gb|EXC17779.1| DNA-directed RNA polymerase D subunit 1 [Morus no...   112   5e-23
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   112   7e-23
emb|CBI34757.3| unnamed protein product [Vitis vinifera]              112   7e-23
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub...   106   3e-21
ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV su...   105   6e-21
ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV su...   105   6e-21
ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citr...   105   6e-21
gb|EMJ12114.1| hypothetical protein PRUPE_ppa000278mg [Prunus pe...   101   9e-20
gb|EOY24612.1| DNA-directed RNA polymerase II subunit RPB1-B, pu...   100   2e-19
ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D sub...    99   6e-19
ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D sub...    96   6e-18
gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycope...    96   6e-18
ref|XP_006573757.1| PREDICTED: DNA-directed RNA polymerase IV su...    94   2e-17
ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV su...    94   2e-17
ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV su...    94   2e-17
ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D sub...    94   2e-17

>gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlisea aurea]
          Length = 1380

 Score =  173 bits (439), Expect = 2e-41
 Identities = 86/149 (57%), Positives = 110/149 (73%), Gaps = 3/149 (2%)
 Frame = +2

Query: 2    FDIVYNGKGHEPAKPTDVYTLLSTHVARTKPDDPMKQFSEKSIVSSH-FNTKTRKSLLTK 178
            FD++Y GKGHE AK  DVY LL +H  R K +   +  S KS    H  NT+  KS L +
Sbjct: 1217 FDLIYKGKGHETAKNEDVYGLLISHDGRAKSNVKERSLSMKSSNPLHGINTQQHKSWLER 1276

Query: 179  MASQ--HFSEVGIRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHPRWEDKIGTGVL 352
            +++   H S +GI+KISQ+LKR+LKEYPM+ +LSGEDKSTA+ ALQFHPRW +KIG+G+ 
Sbjct: 1277 LSANMNHLSVLGIKKISQKLKRILKEYPMDRQLSGEDKSTALTALQFHPRWPEKIGSGIQ 1336

Query: 353  DIKVGRHPDHNETCFFLVRTDGTEEDFSY 439
            +IKVG HP+H +TCF L R+DGTEEDFSY
Sbjct: 1337 EIKVGLHPEHQQTCFILKRSDGTEEDFSY 1365


>gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum majus]
          Length = 1112

 Score =  167 bits (423), Expect = 1e-39
 Identities = 82/150 (54%), Positives = 108/150 (72%), Gaps = 4/150 (2%)
 Frame = +2

Query: 2    FDIVYNGKGHEPAKPTDVYTLLSTHVARTKPDDPMK---QFSEKSIVSSHFNTKTRKSLL 172
            FDI+Y+GKGHEP+KPTDVY+LL++ V   KP + +K   QF+  +  S +  T  RK  L
Sbjct: 949  FDIIYSGKGHEPSKPTDVYSLLNSQVGFAKPSEKIKLPVQFTSGNDQSQNLKTNGRKRFL 1008

Query: 173  TKMASQHFSEVGIRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHPRWEDKIGTGVL 352
              M S   +E  IR++S  LKRML EY  + +L GEDK+ A++ALQ+HPRWE+K G G +
Sbjct: 1009 AGMKSLRSAEDEIREVSLALKRMLHEYASDCQLRGEDKTLALRALQYHPRWEEKTGAGTV 1068

Query: 353  DIKVGRHPDHNET-CFFLVRTDGTEEDFSY 439
            +IKVGRHPDH E+ CFF+V+TDGTEED SY
Sbjct: 1069 EIKVGRHPDHKESRCFFVVKTDGTEEDISY 1098


>ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Solanum tuberosum]
          Length = 1233

 Score =  114 bits (286), Expect = 1e-23
 Identities = 71/160 (44%), Positives = 98/160 (61%), Gaps = 14/160 (8%)
 Frame = +2

Query: 2    FDIVYNGKGHEPAKPTDVYTLLSTHVARTKP--------DDPM--KQFSEKSIVSSHFNT 151
            FDI+Y+GKG+EPA+P DVYTLL  HV    P        D  M  K  + +       N 
Sbjct: 1048 FDIIYSGKGYEPAEPIDVYTLLQNHVTSGTPKVKVTLDEDGGMDGKSLARRLDRLDDLNK 1107

Query: 152  KTRKS--LLTKMASQHFSEVGIRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHPRW 325
            K+ KS   +TK+ S   S   I+K+SQ LK+ML +Y ++ +L+  DK  A+ ALQFHPR 
Sbjct: 1108 KSCKSEWSITKLRS-FISFNDIKKLSQSLKQMLSKYAIDRELNEADKCIAMMALQFHPRR 1166

Query: 326  EDKIGTGV-LDIKVGRHPDHNET-CFFLVRTDGTEEDFSY 439
             +KIG G   +IK+G H ++ ++ CF LVR+DG+ EDFSY
Sbjct: 1167 NEKIGKGAPQEIKIGYHKEYEDSRCFMLVRSDGSVEDFSY 1206


>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Solanum tuberosum]
          Length = 1446

 Score =  114 bits (286), Expect = 1e-23
 Identities = 71/160 (44%), Positives = 98/160 (61%), Gaps = 14/160 (8%)
 Frame = +2

Query: 2    FDIVYNGKGHEPAKPTDVYTLLSTHVARTKP--------DDPM--KQFSEKSIVSSHFNT 151
            FDI+Y+GKG+EPA+P DVYTLL  HV    P        D  M  K  + +       N 
Sbjct: 1261 FDIIYSGKGYEPAEPIDVYTLLQNHVTSGTPKVKVTLDEDGGMDGKSLARRLDRLDDLNK 1320

Query: 152  KTRKS--LLTKMASQHFSEVGIRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHPRW 325
            K+ KS   +TK+ S   S   I+K+SQ LK+ML +Y ++ +L+  DK  A+ ALQFHPR 
Sbjct: 1321 KSCKSEWSITKLRS-FISFNDIKKLSQSLKQMLSKYAIDRELNEADKCIAMMALQFHPRR 1379

Query: 326  EDKIGTGV-LDIKVGRHPDHNET-CFFLVRTDGTEEDFSY 439
             +KIG G   +IK+G H ++ ++ CF LVR+DG+ EDFSY
Sbjct: 1380 NEKIGKGAPQEIKIGYHKEYEDSRCFMLVRSDGSVEDFSY 1419


>gb|EXC17779.1| DNA-directed RNA polymerase D subunit 1 [Morus notabilis]
          Length = 1410

 Score =  112 bits (280), Expect = 5e-23
 Identities = 68/162 (41%), Positives = 94/162 (58%), Gaps = 16/162 (9%)
 Frame = +2

Query: 2    FDIVYNGKGHEPAKPTDVYTLLSTHVARTKPDDPMKQFSEKSIVSSHFNTKTRKSLL-TK 178
            F++V++GKGHE  KP +VY +L+T ++   PD  ++  +E     +H + K    LL  K
Sbjct: 1213 FELVFSGKGHEVDKPINVYDMLATGIS---PD--VQGVNETPDAKNHRSVKFGALLLYDK 1267

Query: 179  MASQHFSEVGIRK--------------ISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFH 316
              SQ   ++GI K              +S  L ++L +YP+N  L  +DKST + AL FH
Sbjct: 1268 SVSQGLKKLGISKDRIKKLFKLDDIWILSNALAKILNKYPINQSLDHKDKSTLMIALYFH 1327

Query: 317  PRWEDKIGTGVLDIKVGRHPDHNET-CFFLVRTDGTEEDFSY 439
            PR ++KIGTG  DIKV  HP H  + CF LVR DGT EDFSY
Sbjct: 1328 PRIDEKIGTGFQDIKVAYHPKHQSSRCFVLVRADGTVEDFSY 1369


>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Vitis vinifera]
          Length = 1560

 Score =  112 bits (279), Expect = 7e-23
 Identities = 70/162 (43%), Positives = 97/162 (59%), Gaps = 15/162 (9%)
 Frame = +2

Query: 2    FDIVYNGKGHEPAKPTDVYTLL----STHVARTKPDDPMKQFSEKSIVSSHF-------N 148
            FDI+Y+ KGHE A+P D+Y LL    S H    K   P+  +   +   +          
Sbjct: 1302 FDILYSAKGHELARPEDIYKLLGSQTSCHEQNLKVKVPITCYQTTTKCGAQLVYANGDSA 1361

Query: 149  TKTRKSL--LTKMASQHFSEVG-IRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHP 319
            +K  KSL  ++K   + F  +  I+K+S+RLK +L++YP+N +LS  DK+T + AL FHP
Sbjct: 1362 SKGCKSLEKISKSVLRSFLSLNDIQKLSRRLKFILQKYPINHQLSEIDKTTLMMALYFHP 1421

Query: 320  RWEDKIGTGVLDIKVGRHPD-HNETCFFLVRTDGTEEDFSYN 442
            R ++KIG G  +IKV  H   HN  CF LVRTDGTEEDFSY+
Sbjct: 1422 RRDEKIGPGAQNIKVRYHSKYHNTRCFSLVRTDGTEEDFSYH 1463


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score =  112 bits (279), Expect = 7e-23
 Identities = 70/162 (43%), Positives = 97/162 (59%), Gaps = 15/162 (9%)
 Frame = +2

Query: 2    FDIVYNGKGHEPAKPTDVYTLL----STHVARTKPDDPMKQFSEKSIVSSHF-------N 148
            FDI+Y+ KGHE A+P D+Y LL    S H    K   P+  +   +   +          
Sbjct: 1160 FDILYSAKGHELARPEDIYKLLGSQTSCHEQNLKVKVPITCYQTTTKCGAQLVYANGDSA 1219

Query: 149  TKTRKSL--LTKMASQHFSEVG-IRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHP 319
            +K  KSL  ++K   + F  +  I+K+S+RLK +L++YP+N +LS  DK+T + AL FHP
Sbjct: 1220 SKGCKSLEKISKSVLRSFLSLNDIQKLSRRLKFILQKYPINHQLSEIDKTTLMMALYFHP 1279

Query: 320  RWEDKIGTGVLDIKVGRHPD-HNETCFFLVRTDGTEEDFSYN 442
            R ++KIG G  +IKV  H   HN  CF LVRTDGTEEDFSY+
Sbjct: 1280 RRDEKIGPGAQNIKVRYHSKYHNTRCFSLVRTDGTEEDFSYH 1321


>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
            sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
            QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Cucumis sativus]
          Length = 1469

 Score =  106 bits (265), Expect = 3e-21
 Identities = 63/166 (37%), Positives = 92/166 (55%), Gaps = 19/166 (11%)
 Frame = +2

Query: 2    FDIVYNGKGHEPAKPTDVYTLLSTHVARTKPDDPMKQFSEKSIVSSHFNTK--------- 154
            FDI+Y+GKGHE  KP DVY LL       K +  ++   +K+ +S  ++ +         
Sbjct: 1281 FDILYSGKGHELNKPVDVYNLLGGQSTCEKQNTKIESL-DKNTISEKYSAQLMLKNGGST 1339

Query: 155  ---------TRKSLLTKMASQHFSEVGIRKISQRLKRMLKEYPMNSKLSGEDKSTAIKAL 307
                       KS+L K  + +     I+K+S  L+ +L +Y +N +L+  DKST + AL
Sbjct: 1340 IKGLKRLDSVSKSILRKFLTLN----DIQKLSFALRTILHKYSLNERLNEVDKSTLMMAL 1395

Query: 308  QFHPRWEDKIGTGVLDIKVGRHPDHNET-CFFLVRTDGTEEDFSYN 442
             FHP  ++KIG G  DIKVG H  +  T CF L+R+DGT EDFSY+
Sbjct: 1396 YFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTEDFSYH 1441


>ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Citrus sinensis] gi|568847098|ref|XP_006477377.1|
            PREDICTED: DNA-directed RNA polymerase IV subunit 1-like
            isoform X3 [Citrus sinensis]
            gi|568847100|ref|XP_006477378.1| PREDICTED: DNA-directed
            RNA polymerase IV subunit 1-like isoform X4 [Citrus
            sinensis]
          Length = 1443

 Score =  105 bits (262), Expect = 6e-21
 Identities = 59/160 (36%), Positives = 91/160 (56%), Gaps = 13/160 (8%)
 Frame = +2

Query: 2    FDIVYNGKGHEPAKPTDVYTLLSTHVARTKPDDPMKQFSEKSIVSSHFNTKTRKSLLTKM 181
            FDI+Y+G+G   +KP DVY LLST V+ +K ++ +K    + ++S     K        +
Sbjct: 1257 FDIIYSGEGRTLSKPVDVYNLLSTPVS-SKQNEKLKVCKAQGLISDKCGAKFGDFAFKGL 1315

Query: 182  ASQHFSEVG------------IRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHPRW 325
             +  F  +             + ++S  LK++L +Y +  +LS +DK+T I+AL FHPR 
Sbjct: 1316 GNLDFETISRGVLRKSWTYNDVLRLSNALKKILHKYSIGQRLSEKDKTTVIRALYFHPRR 1375

Query: 326  EDKIGTGVLDIKVGRHPDH-NETCFFLVRTDGTEEDFSYN 442
             +K+G    DI+V  HP+H N  CF LVR DG+ EDFSY+
Sbjct: 1376 NEKLGIEPPDIEVTYHPEHQNSRCFSLVREDGSIEDFSYH 1415


>ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Citrus sinensis]
          Length = 1481

 Score =  105 bits (262), Expect = 6e-21
 Identities = 59/160 (36%), Positives = 91/160 (56%), Gaps = 13/160 (8%)
 Frame = +2

Query: 2    FDIVYNGKGHEPAKPTDVYTLLSTHVARTKPDDPMKQFSEKSIVSSHFNTKTRKSLLTKM 181
            FDI+Y+G+G   +KP DVY LLST V+ +K ++ +K    + ++S     K        +
Sbjct: 1295 FDIIYSGEGRTLSKPVDVYNLLSTPVS-SKQNEKLKVCKAQGLISDKCGAKFGDFAFKGL 1353

Query: 182  ASQHFSEVG------------IRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHPRW 325
             +  F  +             + ++S  LK++L +Y +  +LS +DK+T I+AL FHPR 
Sbjct: 1354 GNLDFETISRGVLRKSWTYNDVLRLSNALKKILHKYSIGQRLSEKDKTTVIRALYFHPRR 1413

Query: 326  EDKIGTGVLDIKVGRHPDH-NETCFFLVRTDGTEEDFSYN 442
             +K+G    DI+V  HP+H N  CF LVR DG+ EDFSY+
Sbjct: 1414 NEKLGIEPPDIEVTYHPEHQNSRCFSLVREDGSIEDFSYH 1453


>ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citrus clementina]
            gi|557542783|gb|ESR53761.1| hypothetical protein
            CICLE_v10018489mg [Citrus clementina]
          Length = 1443

 Score =  105 bits (262), Expect = 6e-21
 Identities = 59/160 (36%), Positives = 91/160 (56%), Gaps = 13/160 (8%)
 Frame = +2

Query: 2    FDIVYNGKGHEPAKPTDVYTLLSTHVARTKPDDPMKQFSEKSIVSSHFNTKTRKSLLTKM 181
            FDI+Y+G+G   +KP DVY LLST V+ +K ++ +K    + ++S     K        +
Sbjct: 1257 FDIIYSGEGRTLSKPVDVYNLLSTPVS-SKQNEKLKVCKAQGLISDKCGAKFGDFAFKGL 1315

Query: 182  ASQHFSEVG------------IRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHPRW 325
             +  F  +             + ++S  LK++L +Y +  +LS +DK+T I+AL FHPR 
Sbjct: 1316 GNLDFETISRGVLRKSWTYNDVLRLSNALKKILHKYSIGQRLSEKDKTTVIRALYFHPRR 1375

Query: 326  EDKIGTGVLDIKVGRHPDH-NETCFFLVRTDGTEEDFSYN 442
             +K+G    DI+V  HP+H N  CF LVR DG+ EDFSY+
Sbjct: 1376 NEKLGIEPPDIEVTYHPEHQNSRCFSLVREDGSIEDFSYH 1415


>gb|EMJ12114.1| hypothetical protein PRUPE_ppa000278mg [Prunus persica]
          Length = 1356

 Score =  101 bits (252), Expect = 9e-20
 Identities = 60/153 (39%), Positives = 94/153 (61%), Gaps = 6/153 (3%)
 Frame = +2

Query: 2    FDIVYNGKGHEPAKPTDVYTLLSTHVARTKPD--DPMKQFS---EKSIVSSHFNTKTRKS 166
            FDI+Y+ +G   +KP + Y LL + ++ ++ +  +  K ++   +K  V+S    +  +S
Sbjct: 1177 FDILYSKEGLNLSKPLNPYDLLGSQISSSRENAFETSKAWNNTLDKCDVTS-IGLEKSES 1235

Query: 167  LLTKMASQHFSEVGIRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHPRWEDKIGTG 346
            +   +  ++ +   I+K +Q LKR+L++Y +N  L+  DKS    AL FHP   DK+G+G
Sbjct: 1236 VFKSVIRKYLTINDIQKWTQTLKRILRKYDINESLTEGDKSILKMALHFHPHKVDKMGSG 1295

Query: 347  VLDIKVGRHPDH-NETCFFLVRTDGTEEDFSYN 442
            V DIKVG+HP H N  CF LVR D TEEDFSY+
Sbjct: 1296 VQDIKVGQHPKHENARCFMLVRIDRTEEDFSYH 1328


>gb|EOY24612.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
            cacao]
          Length = 1484

 Score =  100 bits (249), Expect = 2e-19
 Identities = 60/162 (37%), Positives = 92/162 (56%), Gaps = 15/162 (9%)
 Frame = +2

Query: 2    FDIVYNGKGHEPAKPTDVYTLLSTHVARTKPDDPMKQFSEKSIVSSHFNT---------- 151
            FDI+Y+ K    A+P DVY LL + ++  K D   +     +  S  + +          
Sbjct: 1295 FDIIYSVKDQRLAEPVDVYKLLGSSISSQKQDVEFEVPKALNFKSEKYGSLLIDALGDSA 1354

Query: 152  -KTRKSLLTKMAS---QHFSEVGIRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHP 319
             +  K + TK  S   +  +   I+++S+ L+ +L +YP++ +LS  D +T + AL FHP
Sbjct: 1355 SEELKKIETKRRSIWRELLTLDDIQRLSRALRNILHKYPIDHRLSEADWNTLMMALYFHP 1414

Query: 320  RWEDKIGTGVLDIKVGRHPDH-NETCFFLVRTDGTEEDFSYN 442
            R ++KIG+G  +IKVG HP+H N  CF LVRTDGT  DFSY+
Sbjct: 1415 RRDEKIGSGAQEIKVGYHPEHANARCFSLVRTDGTIVDFSYH 1456


>ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Fragaria
            vesca subsp. vesca]
          Length = 1438

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 59/157 (37%), Positives = 92/157 (58%), Gaps = 10/157 (6%)
 Frame = +2

Query: 2    FDIVYNGKGHEPAKPTDVYTLLSTHVARTKPDDPMKQ------FSEKSIVSSHF-NTKTR 160
            FDI+++ KG   +KP  VY LLS+ +  T P +  +        S+K +  + + N   R
Sbjct: 1256 FDIIFS-KGPVSSKPIKVYDLLSSQII-TNPQNGFEMSDAPIHLSDKFVAPNMYKNGYLR 1313

Query: 161  K--SLLTKMASQHFSEVGIRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHPRWEDK 334
            K  S+   +  ++ +   I ++SQ LK +L++Y +N +++  DK   +  L+FHP  + K
Sbjct: 1314 KWESITKSVLRENLTIQDIDRLSQALKNILQKYDVNERINDMDKQVLMMVLRFHPHGDRK 1373

Query: 335  IGTGVLDIKVGRHPDH-NETCFFLVRTDGTEEDFSYN 442
            IG G+ ++KVG HPDH N  CF LVRTDGT ED SY+
Sbjct: 1374 IGLGIKEVKVGHHPDHENVRCFMLVRTDGTIEDVSYH 1410


>ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D subunit 1 [Solanum
            lycopersicum]
          Length = 1446

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 66/160 (41%), Positives = 93/160 (58%), Gaps = 14/160 (8%)
 Frame = +2

Query: 2    FDIVYNGKGHEPAKPTDVYTLLSTHVARTKPDDPMKQFSE-----KSIVS-----SHFNT 151
            FDI+Y+GKG+E A+  +VYTLL   V    P+  +    +      S+V         + 
Sbjct: 1261 FDIMYSGKGYELAEQINVYTLLRNLVTVDTPNVKVTLGKDGGMDGMSLVRRLDRLDDLDK 1320

Query: 152  KTRKSLL--TKMASQHFSEVGIRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHPRW 325
            K+ KS L  TK+ S +FS   I+K+SQ LK+ML +Y +  +L+  DK  A+ ALQFHPR 
Sbjct: 1321 KSCKSELSFTKLRS-YFSFNDIKKLSQSLKQMLSKYDIGRELNEADKCLAMMALQFHPRR 1379

Query: 326  EDKIGTGV-LDIKVGRHPD-HNETCFFLVRTDGTEEDFSY 439
             +KIG G   +IK+G H +     CF +VR+D T EDFSY
Sbjct: 1380 NEKIGKGAPKEIKIGYHQEFEGSRCFMVVRSDDTVEDFSY 1419


>gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
          Length = 1138

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 66/160 (41%), Positives = 93/160 (58%), Gaps = 14/160 (8%)
 Frame = +2

Query: 2    FDIVYNGKGHEPAKPTDVYTLLSTHVARTKPDDPMKQFSE-----KSIVS-----SHFNT 151
            FDI+Y+GKG+E A+  +VYTLL   V    P+  +    +      S+V         + 
Sbjct: 953  FDIMYSGKGYELAEQINVYTLLRNLVTVDTPNVKVTLGKDGGMDGMSLVRRLDRLDDLDK 1012

Query: 152  KTRKSLL--TKMASQHFSEVGIRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHPRW 325
            K+ KS L  TK+ S +FS   I+K+SQ LK+ML +Y +  +L+  DK  A+ ALQFHPR 
Sbjct: 1013 KSCKSELSFTKLRS-YFSFNDIKKLSQSLKQMLSKYDIGRELNEADKCLAMMALQFHPRR 1071

Query: 326  EDKIGTGV-LDIKVGRHPD-HNETCFFLVRTDGTEEDFSY 439
             +KIG G   +IK+G H +     CF +VR+D T EDFSY
Sbjct: 1072 NEKIGKGAPKEIKIGYHQEFEGSRCFMVVRSDDTVEDFSY 1111


>ref|XP_006573757.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X4
            [Glycine max]
          Length = 1381

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 56/158 (35%), Positives = 86/158 (54%), Gaps = 12/158 (7%)
 Frame = +2

Query: 2    FDIVYNGKGHEPAKPTDVYTLLS-----------THVARTKPDDPMKQFSEKSIVSSHFN 148
            FD++Y+ KGH+ AK  DVY LL            TH+ +   D    +F  K+  +    
Sbjct: 1200 FDVIYSEKGHQVAKSVDVYELLEASFDKPNNKIGTHLHKYSSDKCGSEFRHKNGYALK-E 1258

Query: 149  TKTRKSLLTKMASQHFSEVGIRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHPRWE 328
             K  K++L    + +     I+K++   + +L +Y ++  LS  D+ST ++ L FHP   
Sbjct: 1259 GKQWKTILRNFVTVN----DIQKLTFASRCILNKYSIDELLSESDRSTMLRVLNFHPHKS 1314

Query: 329  DKIGTGVLDIKVGRHPDHNET-CFFLVRTDGTEEDFSY 439
            +K G G  DIKVG HP + ++ CF ++RTDGT EDFSY
Sbjct: 1315 EKFGIGPQDIKVGWHPKYKDSRCFHIIRTDGTVEDFSY 1352


>ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Glycine max]
          Length = 1457

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 56/158 (35%), Positives = 86/158 (54%), Gaps = 12/158 (7%)
 Frame = +2

Query: 2    FDIVYNGKGHEPAKPTDVYTLLS-----------THVARTKPDDPMKQFSEKSIVSSHFN 148
            FD++Y+ KGH+ AK  DVY LL            TH+ +   D    +F  K+  +    
Sbjct: 1276 FDVIYSEKGHQVAKSVDVYELLEASFDKPNNKIGTHLHKYSSDKCGSEFRHKNGYALK-E 1334

Query: 149  TKTRKSLLTKMASQHFSEVGIRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHPRWE 328
             K  K++L    + +     I+K++   + +L +Y ++  LS  D+ST ++ L FHP   
Sbjct: 1335 GKQWKTILRNFVTVN----DIQKLTFASRCILNKYSIDELLSESDRSTMLRVLNFHPHKS 1390

Query: 329  DKIGTGVLDIKVGRHPDHNET-CFFLVRTDGTEEDFSY 439
            +K G G  DIKVG HP + ++ CF ++RTDGT EDFSY
Sbjct: 1391 EKFGIGPQDIKVGWHPKYKDSRCFHIIRTDGTVEDFSY 1428


>ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Glycine max]
          Length = 1458

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 56/158 (35%), Positives = 86/158 (54%), Gaps = 12/158 (7%)
 Frame = +2

Query: 2    FDIVYNGKGHEPAKPTDVYTLLS-----------THVARTKPDDPMKQFSEKSIVSSHFN 148
            FD++Y+ KGH+ AK  DVY LL            TH+ +   D    +F  K+  +    
Sbjct: 1277 FDVIYSEKGHQVAKSVDVYELLEASFDKPNNKIGTHLHKYSSDKCGSEFRHKNGYALK-E 1335

Query: 149  TKTRKSLLTKMASQHFSEVGIRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHPRWE 328
             K  K++L    + +     I+K++   + +L +Y ++  LS  D+ST ++ L FHP   
Sbjct: 1336 GKQWKTILRNFVTVN----DIQKLTFASRCILNKYSIDELLSESDRSTMLRVLNFHPHKS 1391

Query: 329  DKIGTGVLDIKVGRHPDHNET-CFFLVRTDGTEEDFSY 439
            +K G G  DIKVG HP + ++ CF ++RTDGT EDFSY
Sbjct: 1392 EKFGIGPQDIKVGWHPKYKDSRCFHIIRTDGTVEDFSY 1429


>ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X5
            [Cicer arietinum]
          Length = 1474

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 55/155 (35%), Positives = 82/155 (52%), Gaps = 9/155 (5%)
 Frame = +2

Query: 2    FDIVYNGKGHEPAKPTDVYTLLSTHVARTKPDDPMKQFSEKSIVSSHFNTKTRKSLLTKM 181
            FD++Y+ K  E AK  DVY LL T   +   +    Q +  S    +   + +K      
Sbjct: 1282 FDVMYSEKVQELAKSVDVYDLLETSFDQLDQEINTSQSNNYSSDKCNSQFRHKKGRYAPK 1341

Query: 182  ASQHFSEV--------GIRKISQRLKRMLKEYPMNSKLSGEDKSTAIKALQFHPRWEDKI 337
              + +  V         I+K++   + +L +YP++  LS  DK T +K L FHPR  +K+
Sbjct: 1342 EPKQWKSVIRNFMTANDIQKLTSASRFILNKYPIDQILSERDKLTIMKVLHFHPRRNEKL 1401

Query: 338  GTGVLDIKVGRHPDHNET-CFFLVRTDGTEEDFSY 439
            G+G   IKVG HP   ++ CFF++RTDGT EDFSY
Sbjct: 1402 GSGPQHIKVGWHPKFTDSRCFFIIRTDGTVEDFSY 1436