BLASTX nr result

ID: Rehmannia23_contig00032384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00032384
         (464 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB54149.1| Proliferating cell nuclear antigen large form [Mo...    63   4e-08
sp|Q00265.1|PCNA2_DAUCA RecName: Full=Proliferating cell nuclear...    61   2e-07
emb|CAB56779.1| proliferating cell-nuclear antigen [Daucus carota]     61   2e-07

>gb|EXB54149.1| Proliferating cell nuclear antigen large form [Morus notabilis]
          Length = 335

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 49/121 (40%), Positives = 64/121 (52%), Gaps = 5/121 (4%)
 Frame = -2

Query: 463 VEYKIAEVGYLRFYLAPKIXXXXENAAAQLETXXXXXXXXXXXXQVEPILVEESELVEET 284
           VEYK+AE+G++RFYLAPKI    E   AQ ET                    + E   +T
Sbjct: 237 VEYKVAEMGHIRFYLAPKI-EEEEEIEAQRETR------------------PQVETKPKT 277

Query: 283 KPKVE---PI--LVEESEFVEERKPKVEIEPETKSNGEADASVETKPESETNGEAEVMDV 119
           KPK E   PI  +  + E V + KPK+EI+   K   E +AS E+KP+ +   E EVMDV
Sbjct: 278 KPKTEIEPPIDDIKPKVEHVSDIKPKLEIK---KPKEEIEASGESKPQVDAKAEIEVMDV 334

Query: 118 E 116
           E
Sbjct: 335 E 335


>sp|Q00265.1|PCNA2_DAUCA RecName: Full=Proliferating cell nuclear antigen large form;
           Short=PCNA; AltName: Full=Cyclin
          Length = 365

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 16/132 (12%)
 Frame = -2

Query: 463 VEYKIAEVGYLRFYLAPKIXXXXENAAAQLETXXXXXXXXXXXXQVEPILVEESELVEET 284
           VEYKIAE+GY+R+YLAPKI    + AA   +               +    E +  V+  
Sbjct: 237 VEYKIAEMGYIRYYLAPKI-EEEDEAANYAQPAQNSAAAATSNNGTKK--NEGNNKVDSK 293

Query: 283 KPKVEPILVEESEFVEERKPKVEIEPETKSNGEADASV----------------ETKPES 152
           K  ++   V++SE   + +P+ + + +T++  + D  V                ETKP++
Sbjct: 294 KRAIKSEFVDDSEAATDAQPQAKAKTKTEAGEDDDVEVMDTKPKNEPDDGDEVMETKPKT 353

Query: 151 ETNGEAEVMDVE 116
           E+NGE EVMD+E
Sbjct: 354 ESNGEVEVMDIE 365


>emb|CAB56779.1| proliferating cell-nuclear antigen [Daucus carota]
          Length = 367

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 16/132 (12%)
 Frame = -2

Query: 463 VEYKIAEVGYLRFYLAPKIXXXXENAAAQLETXXXXXXXXXXXXQVEPILVEESELVEET 284
           VEYKIAE+GY+R+YLAPKI    + AA   +               +    E +  V+  
Sbjct: 239 VEYKIAEMGYIRYYLAPKI-EEEDEAANYAQPAQNSAAAATSNNGTKK--NEGNNKVDSK 295

Query: 283 KPKVEPILVEESEFVEERKPKVEIEPETKSNGEADASV----------------ETKPES 152
           K  ++   V++SE   + +P+ + + +T++  + D  V                ETKP++
Sbjct: 296 KRAIKSEFVDDSEAATDAQPQAKAKTKTEAGEDDDVEVMDTKPKNEPDDGDEVMETKPKT 355

Query: 151 ETNGEAEVMDVE 116
           E+NGE EVMD+E
Sbjct: 356 ESNGEVEVMDIE 367


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