BLASTX nr result

ID: Rehmannia23_contig00032348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00032348
         (318 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004241746.1| PREDICTED: dehydration-responsive element-bi...    62   8e-08
ref|XP_006356143.1| PREDICTED: ethylene-responsive transcription...    61   1e-07
ref|XP_006359467.1| PREDICTED: dehydration-responsive element-bi...    59   9e-07
gb|AEM63548.1| dehydration-responsive element-binding protein DR...    59   9e-07

>ref|XP_004241746.1| PREDICTED: dehydration-responsive element-binding protein 3-like
           [Solanum lycopersicum]
          Length = 192

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 38/106 (35%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
 Frame = +2

Query: 2   PRPASLSPRDVXXXXXXXXXMEELXXXXXXXXXXXXXXXCEVNNAAGSSDELGEIIXXXX 181
           PRP SLSPRDV         ME+L                 ++    +S+ELGEII    
Sbjct: 81  PRPISLSPRDVQAAAAEAAAMEDLNYVSSTSSVS------SIDKITSASEELGEIIELPS 134

Query: 182 XXXXXXXXXXXTA--VVDSAEGWLQPPWWAFDKDFCEYFLDQVAAG 313
                      T   + DS +GWL PPWWA D DF  Y  +Q A G
Sbjct: 135 LDGSFESEESKTELKISDSVDGWLYPPWWASDGDFDGYLFEQDAVG 180


>ref|XP_006356143.1| PREDICTED: ethylene-responsive transcription factor TINY-like
           [Solanum tuberosum]
          Length = 189

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 37/104 (35%), Positives = 45/104 (43%)
 Frame = +2

Query: 2   PRPASLSPRDVXXXXXXXXXMEELXXXXXXXXXXXXXXXCEVNNAAGSSDELGEIIXXXX 181
           PRP SLSPRDV         ME+                  ++    +SD+LGEII    
Sbjct: 81  PRPISLSPRDVQAAAAEAAAMED------PNLVSSSSSVSSIDKITSASDDLGEIIELPS 134

Query: 182 XXXXXXXXXXXTAVVDSAEGWLQPPWWAFDKDFCEYFLDQVAAG 313
                      T + DS +GWL PPWWA D DF  Y  +Q A G
Sbjct: 135 LDGSFESKTELT-MTDSVDGWLYPPWWASDGDFDGYLFEQDAVG 177


>ref|XP_006359467.1| PREDICTED: dehydration-responsive element-binding protein 3-like
           [Solanum tuberosum]
          Length = 218

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 36/105 (34%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
 Frame = +2

Query: 2   PRPASLSPRDVXXXXXXXXXMEELXXXXXXXXXXXXXXXCEVNNAAGSSDELGEIIXXXX 181
           PRPAS+SPRDV         M+EL                 +  AA S D+LG+II    
Sbjct: 102 PRPASISPRDVQAAAAKAAAMDELNSSVSSSSTLSESMEETMTVAAASEDQLGQIIELPN 161

Query: 182 XXXXXXXXXXXTAVVDSAEGWLQPP-WWAFDKDFCEYFLDQVAAG 313
                       +  DS EGW+ PP W  F+ +FC YF +  A G
Sbjct: 162 LEGIFESEKMKLS--DSGEGWVYPPPWGEFEDEFCGYFFEHTAIG 204


>gb|AEM63548.1| dehydration-responsive element-binding protein DREB1 [Solanum
           tuberosum] gi|409030180|gb|AFV07577.1| AP2 c4 [Solanum
           tuberosum]
          Length = 218

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 36/105 (34%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
 Frame = +2

Query: 2   PRPASLSPRDVXXXXXXXXXMEELXXXXXXXXXXXXXXXCEVNNAAGSSDELGEIIXXXX 181
           PRPAS+SPRDV         M+EL                 +  AA S D+LG+II    
Sbjct: 102 PRPASISPRDVQAAAAKAAAMDELNSSVSSSSTLSESMEETMTVAAASEDQLGQIIELPN 161

Query: 182 XXXXXXXXXXXTAVVDSAEGWLQPP-WWAFDKDFCEYFLDQVAAG 313
                       +  DS EGW+ PP W  F+ +FC YF +  A G
Sbjct: 162 LEGIFESEKMKLS--DSGEGWVYPPPWGEFEDEFCGYFFEHTAIG 204


Top