BLASTX nr result
ID: Rehmannia23_contig00032209
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00032209
(436 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006363832.1| PREDICTED: BTB/POZ domain-containing protein... 103 3e-20
ref|XP_004231923.1| PREDICTED: BTB/POZ domain-containing protein... 97 2e-18
ref|XP_002279671.1| PREDICTED: BTB/POZ domain-containing protein... 80 3e-13
emb|CAN75904.1| hypothetical protein VITISV_001972 [Vitis vinifera] 79 6e-13
ref|XP_003632500.1| PREDICTED: BTB/POZ domain-containing protein... 79 8e-13
ref|XP_006404090.1| hypothetical protein EUTSA_v10010291mg [Eutr... 74 2e-11
ref|XP_006426125.1| hypothetical protein CICLE_v10025483mg [Citr... 74 3e-11
ref|XP_006290911.1| hypothetical protein CARUB_v10017024mg [Caps... 70 2e-10
ref|XP_002877710.1| BTB/POZ domain-containing protein [Arabidops... 70 2e-10
ref|XP_004289350.1| PREDICTED: BTB/POZ domain-containing protein... 70 3e-10
ref|XP_004141985.1| PREDICTED: BTB/POZ domain-containing protein... 70 3e-10
ref|XP_006466434.1| PREDICTED: BTB/POZ domain-containing protein... 68 1e-09
ref|NP_001190044.1| phototropic-responsive NPH3 family protein [... 68 1e-09
ref|NP_190559.1| phototropic-responsive NPH3 family protein [Ara... 68 1e-09
gb|EMJ08586.1| hypothetical protein PRUPE_ppa004499mg [Prunus pe... 67 2e-09
gb|EOX91681.1| DNA-directed RNA polymerase II subunit RPB1 isofo... 65 7e-09
gb|EOX91679.1| DNA-directed RNA polymerase II subunit RPB1 isofo... 65 7e-09
emb|CBI33692.3| unnamed protein product [Vitis vinifera] 65 7e-09
ref|XP_002525272.1| protein binding protein, putative [Ricinus c... 62 6e-08
ref|XP_002307320.2| hypothetical protein POPTR_0005s19340g [Popu... 57 2e-06
>ref|XP_006363832.1| PREDICTED: BTB/POZ domain-containing protein At3g49900-like
[Solanum tuberosum]
Length = 488
Score = 103 bits (256), Expect = 3e-20
Identities = 67/147 (45%), Positives = 96/147 (65%), Gaps = 3/147 (2%)
Frame = +3
Query: 3 AIMSATNSRIQTLEKELSGMRKYLSESEGSISNRIDSGRSASFRFSSESGNKIERGERGS 182
A M+AT+SRIQ+LE+ELSGM+K L+ES+ + N +S RSASFR SSE NKI+RG+ GS
Sbjct: 342 AAMNATSSRIQSLEQELSGMKKLLNESDQNAKN--NSARSASFRLSSE--NKIDRGQIGS 397
Query: 183 VSSLSLR--NVKEDVVMXXXXXXXXDGCRSVERSFGRRLVSGLRSAFGLQKKKCESKGAI 356
VSS S R ++ VM + + +F RR ++GL+SAF + KKK E+K +
Sbjct: 398 VSSASFRILTARDRAVMGSSNSSEVSYEKVEKINFSRRFMNGLKSAFRVSKKKTETK--V 455
Query: 357 KNFERLED-ENGNKDIVIIKKDQAFHR 434
+N + ED + + ++V+IKKD F R
Sbjct: 456 ENVKETEDGKQQHGEVVVIKKDVPFRR 482
>ref|XP_004231923.1| PREDICTED: BTB/POZ domain-containing protein At3g49900-like
[Solanum lycopersicum]
Length = 498
Score = 97.1 bits (240), Expect = 2e-18
Identities = 67/154 (43%), Positives = 99/154 (64%), Gaps = 10/154 (6%)
Frame = +3
Query: 3 AIMSATNSRIQTLEKELSGMRKYLSESEGSISNRI--DSGRSASFRFSSESGNKIERGER 176
A M+AT+SRIQ+LE+ELSGM+K L+ES+ + N + +S RSASFR SSE NKI+RG+
Sbjct: 345 AAMNATSSRIQSLEQELSGMKKLLNESDQNAKNDLSHNSARSASFRLSSE--NKIDRGQI 402
Query: 177 GSVSSLSLR--NVKEDVVM---XXXXXXXXDGCRSVERSFGRRLVSGLRSAFGLQKKKCE 341
GSVSS S R ++ VM + + + +F RR ++GL++AF + KKK E
Sbjct: 403 GSVSSASFRILTARDRAVMGSSNSSEVSYEENTKVEKINFSRRFMNGLKNAFRVPKKKTE 462
Query: 342 SKGAIKNFERLEDENGNK---DIVIIKKDQAFHR 434
+K ++N + E ENG + ++V+I+KD F R
Sbjct: 463 TK--VENVK--EAENGKQQHGEVVVIEKDVPFRR 492
>ref|XP_002279671.1| PREDICTED: BTB/POZ domain-containing protein At3g49900 [Vitis
vinifera]
Length = 507
Score = 80.1 bits (196), Expect = 3e-13
Identities = 59/160 (36%), Positives = 88/160 (55%), Gaps = 17/160 (10%)
Frame = +3
Query: 6 IMSATNSRIQTLEKELSGMRKYLSESEGSISNRIDSGRSASFRFSSESGNKIERGERGSV 185
IM AT +RI++LE++L+ M+K L ESE +N + S RSASFR SS NKIERGERGS+
Sbjct: 345 IMGATVTRIKSLEEDLTAMKKTLEESEKQ-ANALGSVRSASFRLSST--NKIERGERGSI 401
Query: 186 SSLSLR-NVKEDVVMXXXXXXXXDGCRS------VERSFGRRLVSGLRSAFGLQKKKCES 344
SS S R +K + + +G + +++ RL+ GL+SAF + S
Sbjct: 402 SSASFRFRLKGETTVDGVLSPLSEGIFNETPTPRTKKNLRARLMKGLKSAFRVSTNTSAS 461
Query: 345 KG---------AIKNFERLEDEN-GNKDIVIIKKDQAFHR 434
KG + E +DE GN+ ++++K+ HR
Sbjct: 462 KGNNIDGKTSSGMDGDEAGDDEEVGNEQVIVMKESPPSHR 501
>emb|CAN75904.1| hypothetical protein VITISV_001972 [Vitis vinifera]
Length = 507
Score = 79.0 bits (193), Expect = 6e-13
Identities = 58/162 (35%), Positives = 88/162 (54%), Gaps = 19/162 (11%)
Frame = +3
Query: 6 IMSATNSRIQTLEKELSGMRKYLSESEGSISNRIDSGRSASFRFSSESGNKIERGERGSV 185
IM AT +RI++LE++L+ M+K L ESE +N + S RSASFR SS NKIERGERGS+
Sbjct: 345 IMGATVTRIKSLEEDLTAMKKTLEESEKQ-ANALGSVRSASFRLSST--NKIERGERGSI 401
Query: 186 SSLSLR-NVKEDVVMXXXXXXXXDGCRS------VERSFGRRLVSGLRSAFGLQKKKCES 344
SS S R +K + + +G + +++ RL+ GL+SAF + S
Sbjct: 402 SSASFRFRLKGETTVDGVLSPLSEGLFNETPTPRTKKNLXARLMKGLKSAFRVSTNTSAS 461
Query: 345 KGAIKNFERL------------EDENGNKDIVIIKKDQAFHR 434
KG N + ++E GN+ ++++K+ HR
Sbjct: 462 KG--NNIDGKTSSGMDGDGSGDDEEVGNEQVIVMKESPXSHR 501
>ref|XP_003632500.1| PREDICTED: BTB/POZ domain-containing protein At3g49900-like [Vitis
vinifera] gi|296087311|emb|CBI33685.3| unnamed protein
product [Vitis vinifera]
Length = 507
Score = 78.6 bits (192), Expect = 8e-13
Identities = 58/162 (35%), Positives = 88/162 (54%), Gaps = 19/162 (11%)
Frame = +3
Query: 6 IMSATNSRIQTLEKELSGMRKYLSESEGSISNRIDSGRSASFRFSSESGNKIERGERGSV 185
IM AT +RI++LE++L+ M+K L ESE +N + S RSASFR SS NKIERGERGS+
Sbjct: 345 IMGATVTRIKSLEEDLTAMKKTLEESEKQ-ANALGSVRSASFRLSST--NKIERGERGSI 401
Query: 186 SSLSLR-NVKEDVVMXXXXXXXXDGCRS------VERSFGRRLVSGLRSAFGLQKKKCES 344
SS S R +K + + +G + +++ RL+ GL+SAF + S
Sbjct: 402 SSASFRFRLKGETTVDGVLSPLSEGLFNETPTPRTKKNLRARLMKGLKSAFRVSTNTSAS 461
Query: 345 KGAIKNFERL------------EDENGNKDIVIIKKDQAFHR 434
KG N + ++E GN+ ++++K+ HR
Sbjct: 462 KG--NNIDGKTSSGMDGDGSGDDEEVGNEQVIVMKESPPSHR 501
>ref|XP_006404090.1| hypothetical protein EUTSA_v10010291mg [Eutrema salsugineum]
gi|557105209|gb|ESQ45543.1| hypothetical protein
EUTSA_v10010291mg [Eutrema salsugineum]
Length = 521
Score = 74.3 bits (181), Expect = 2e-11
Identities = 58/153 (37%), Positives = 81/153 (52%), Gaps = 13/153 (8%)
Frame = +3
Query: 3 AIMSATNSRIQTLEKELSGMRKYLS-ESEGSISNRI---------DSGRSASFRF---SS 143
A M +T+SRIQ LEKEL M++++S ESE S RI DS RSASF SS
Sbjct: 362 AAMDSTSSRIQNLEKELDAMKRFISKESEKQRSERIIESKSRSVMDSARSASFHCVHQSS 421
Query: 144 ESGNKIERGERGSVSSLSLRNVKEDVVMXXXXXXXXDGCRSVERSFGRRLVSGLRSAFGL 323
+ NK +RGERGSVSSLS + + +S G+RL++G++S F
Sbjct: 422 NNVNKTQRGERGSVSSLSTTFRRGGTTSPPPPQ------QPQSKSLGKRLINGIKSVFSS 475
Query: 324 QKKKCESKGAIKNFERLEDENGNKDIVIIKKDQ 422
K+ K A +E E +G +D + IK ++
Sbjct: 476 SSKQGGKKNA---YEVEEIYDGLEDFIWIKDNE 505
>ref|XP_006426125.1| hypothetical protein CICLE_v10025483mg [Citrus clementina]
gi|557528115|gb|ESR39365.1| hypothetical protein
CICLE_v10025483mg [Citrus clementina]
Length = 486
Score = 73.6 bits (179), Expect = 3e-11
Identities = 48/134 (35%), Positives = 71/134 (52%), Gaps = 19/134 (14%)
Frame = +3
Query: 3 AIMSATNSRIQTLEKELSGMRKYLSESE------GSISNRI-------------DSGRSA 125
A M AT+ RIQ+LE EL GM+K L E+E ++NR+ +G+SA
Sbjct: 337 AAMGATSLRIQSLENELDGMKKRLKETEKERSDLSDLNNRLLHEKGRSILSSSTSAGKSA 396
Query: 126 SFRFSSESGNKIERGERGSVSSLSLRNVKEDVVMXXXXXXXXDGCRSVERSFGRRLVSGL 305
SF + KI GERGSVSSL++R+V + ++++ GRRL++GL
Sbjct: 397 SFHYGDVPNKKIVGGERGSVSSLNVRDVGGRGRLLLLGTEASRNHDKMKKNIGRRLINGL 456
Query: 306 RSAFGLQKKKCESK 347
+SAF + K+ K
Sbjct: 457 KSAFRVSKRASPDK 470
>ref|XP_006290911.1| hypothetical protein CARUB_v10017024mg [Capsella rubella]
gi|482559618|gb|EOA23809.1| hypothetical protein
CARUB_v10017024mg [Capsella rubella]
Length = 519
Score = 70.5 bits (171), Expect = 2e-10
Identities = 56/153 (36%), Positives = 83/153 (54%), Gaps = 14/153 (9%)
Frame = +3
Query: 3 AIMSATNSRIQTLEKELSGMRKYLS-ESEGSISNRI----------DSGRSASFRFSSES 149
A M++T+SRI++LEKEL M+K++S ESE S +I DS RSASF +S
Sbjct: 363 AAMNSTSSRIESLEKELDAMKKFISKESEKQKSEKIIIESRSRSVMDSARSASFHCVQQS 422
Query: 150 G--NKIERGERGSVSSLSLRNVKEDVVMXXXXXXXXDGCRSVERSFGRRLVSGLRSAFGL 323
NK +RGERGSVS+LS + ++S G++L+ G+++AF
Sbjct: 423 SNVNKTQRGERGSVSNLSTTFQRSRASPPQP---------KPQKSLGKKLIKGIKNAFST 473
Query: 324 QKKKCESKGAIKNFERLED-ENGNKDIVIIKKD 419
K +GA KN +E+ +G +D V IK +
Sbjct: 474 SNK----QGAKKNAYVVEEIYDGLEDFVWIKDE 502
>ref|XP_002877710.1| BTB/POZ domain-containing protein [Arabidopsis lyrata subsp.
lyrata] gi|297323548|gb|EFH53969.1| BTB/POZ
domain-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 511
Score = 70.5 bits (171), Expect = 2e-10
Identities = 57/153 (37%), Positives = 82/153 (53%), Gaps = 14/153 (9%)
Frame = +3
Query: 3 AIMSATNSRIQTLEKELSGMRKYLS-ESEGSISNRI----------DSGRSASFRFSSES 149
A M++T+SRI+ LEKEL M+K+LS ESE S+RI DS RSASF +
Sbjct: 357 AAMNSTSSRIECLEKELDAMKKFLSKESEKQKSDRIIIESRSRSVMDSARSASFHCVHQP 416
Query: 150 G--NKIERGERGSVSSLSLRNVKEDVVMXXXXXXXXDGCRSVERSFGRRLVSGLRSAFGL 323
NK +RG+RGSVS+LS + ++S G+RL+ G+++AF
Sbjct: 417 SNLNKTQRGDRGSVSNLSTTFRRRRA-----------SPPQPQKSIGKRLIKGIKNAFST 465
Query: 324 QKKKCESKGAIKNFERLED-ENGNKDIVIIKKD 419
K +GA KN +++ +G +D V IK D
Sbjct: 466 SSK----QGAKKNAYAVDEIYDGLEDFVWIKDD 494
>ref|XP_004289350.1| PREDICTED: BTB/POZ domain-containing protein At3g49900-like
[Fragaria vesca subsp. vesca]
Length = 490
Score = 70.1 bits (170), Expect = 3e-10
Identities = 49/143 (34%), Positives = 73/143 (51%), Gaps = 6/143 (4%)
Frame = +3
Query: 3 AIMSATNSRIQTLEKELSGMRKYLSESEGSISNRIDSG---RSASFRFSSESGNKIER-- 167
A M+AT+SRI+TLE+ELSGM+K L E S ++G +SASF + S N + +
Sbjct: 351 ATMAATSSRIRTLEEELSGMKKLLEECHNERSIMAEAGGERKSASFHYGSSDENNLSKLI 410
Query: 168 -GERGSVSSLSLRNVKEDVVMXXXXXXXXDGCRSVERSFGRRLVSGLRSAFGLQKKKCES 344
+ S SS L N + G V +S +RL+ GL+ AF + K S
Sbjct: 411 TNKSASSSSFRLINFRGKEKTEGNNWSSCTGTPGVTKSISQRLIGGLKKAFRVSGSKDVS 470
Query: 345 KGAIKNFERLEDENGNKDIVIIK 413
+ I ++ D NKDI++I+
Sbjct: 471 EKKIVSY---GDGGNNKDIIVIE 490
>ref|XP_004141985.1| PREDICTED: BTB/POZ domain-containing protein At3g49900-like
[Cucumis sativus]
Length = 523
Score = 70.1 bits (170), Expect = 3e-10
Identities = 57/177 (32%), Positives = 91/177 (51%), Gaps = 35/177 (19%)
Frame = +3
Query: 3 AIMSATNSRIQTLEKELSGMRKYL--SESEGSISNRIDSGRSASFRFSSE-------SGN 155
A M ATNSRI+TLE +LS M+K L SE + S+S GRSASF + E +
Sbjct: 348 AAMHATNSRIRTLESQLSSMKKKLQDSEKQRSLSQDAGRGRSASFHYGDEKSSCDNNNSK 407
Query: 156 KIERGERGSVSSLSLRNVKEDVVMXXXXXXXXDGCR-SVER----------------SFG 284
+ RG+RGS +S S+ + D GC+ S +R SFG
Sbjct: 408 VVARGQRGS-TSFSVSRMSAD--FKTDYFKFGGGCKPSSDRGSSSNHEGARKSGRSSSFG 464
Query: 285 RRLVSGLRSAF-----GLQKKKCESKGAIKN----FERLEDENGNKDIVIIKKDQAF 428
+RL++G+++ F G + K +++G + FE D++G+ DIV+++++Q +
Sbjct: 465 QRLMNGIKNVFRVSSLGETESKVQNRGDEEEGEDLFEEEGDDDGDDDIVVMRRNQLY 521
>ref|XP_006466434.1| PREDICTED: BTB/POZ domain-containing protein At3g49900-like [Citrus
sinensis]
Length = 485
Score = 68.2 bits (165), Expect = 1e-09
Identities = 47/134 (35%), Positives = 72/134 (53%), Gaps = 19/134 (14%)
Frame = +3
Query: 3 AIMSATNSRIQTLEKELSGMRKYLSESE------GSISNRI-------------DSGRSA 125
A M AT+ RIQ+LE EL GM+K L E+E ++NR+ +G+SA
Sbjct: 337 AAMGATSLRIQSLENELDGMKKRLKETEKERSDLSDLNNRLLHERGRSILSSSTSAGKSA 396
Query: 126 SFRFSSESGNKIERGERGSVSSLSLRNVKEDVVMXXXXXXXXDGCRSVERSFGRRLVSGL 305
SF + ++ KI GERGSVSSL++R+ + ++++ GRRL++GL
Sbjct: 397 SFHYGDDN-KKIVGGERGSVSSLNVRDGGGRGRLLLLGTEASRNHDKMKKNIGRRLINGL 455
Query: 306 RSAFGLQKKKCESK 347
+SAF + K+ K
Sbjct: 456 KSAFRVSKQASPDK 469
>ref|NP_001190044.1| phototropic-responsive NPH3 family protein [Arabidopsis thaliana]
gi|332645083|gb|AEE78604.1| phototropic-responsive NPH3
family protein [Arabidopsis thaliana]
Length = 520
Score = 68.2 bits (165), Expect = 1e-09
Identities = 54/152 (35%), Positives = 80/152 (52%), Gaps = 13/152 (8%)
Frame = +3
Query: 3 AIMSATNSRIQTLEKELSGMRKYLS-ESEGSISNR----------IDSGRSASFR--FSS 143
A M++T+SRI++LEKEL M+++LS ESE S+R +DS RSASF
Sbjct: 364 AAMNSTSSRIESLEKELDTMKRFLSKESEKQKSDRNIVESRSRSVMDSARSASFHCVHQP 423
Query: 144 ESGNKIERGERGSVSSLSLRNVKEDVVMXXXXXXXXDGCRSVERSFGRRLVSGLRSAFGL 323
+ NK +RG+RGSVS+LS + ++S G+RL+ G+++AF
Sbjct: 424 SNVNKTQRGDRGSVSNLSTTYRRRRASPPQ---------AQPQKSIGKRLIMGIKNAFST 474
Query: 324 QKKKCESKGAIKNFERLEDENGNKDIVIIKKD 419
K+ K A + E +G +D V IK D
Sbjct: 475 SSKQVPKKNA---YAVEEIYDGLEDFVWIKDD 503
>ref|NP_190559.1| phototropic-responsive NPH3 family protein [Arabidopsis thaliana]
gi|75183315|sp|Q9M2W8.1|Y3990_ARATH RecName:
Full=BTB/POZ domain-containing protein At3g49900
gi|6723435|emb|CAB66928.1| putative protein [Arabidopsis
thaliana] gi|332645082|gb|AEE78603.1|
phototropic-responsive NPH3 family protein [Arabidopsis
thaliana]
Length = 517
Score = 68.2 bits (165), Expect = 1e-09
Identities = 54/152 (35%), Positives = 80/152 (52%), Gaps = 13/152 (8%)
Frame = +3
Query: 3 AIMSATNSRIQTLEKELSGMRKYLS-ESEGSISNR----------IDSGRSASFR--FSS 143
A M++T+SRI++LEKEL M+++LS ESE S+R +DS RSASF
Sbjct: 361 AAMNSTSSRIESLEKELDTMKRFLSKESEKQKSDRNIVESRSRSVMDSARSASFHCVHQP 420
Query: 144 ESGNKIERGERGSVSSLSLRNVKEDVVMXXXXXXXXDGCRSVERSFGRRLVSGLRSAFGL 323
+ NK +RG+RGSVS+LS + ++S G+RL+ G+++AF
Sbjct: 421 SNVNKTQRGDRGSVSNLSTTYRRRRASPPQ---------AQPQKSIGKRLIMGIKNAFST 471
Query: 324 QKKKCESKGAIKNFERLEDENGNKDIVIIKKD 419
K+ K A + E +G +D V IK D
Sbjct: 472 SSKQVPKKNA---YAVEEIYDGLEDFVWIKDD 500
>gb|EMJ08586.1| hypothetical protein PRUPE_ppa004499mg [Prunus persica]
Length = 506
Score = 67.0 bits (162), Expect = 2e-09
Identities = 49/129 (37%), Positives = 68/129 (52%), Gaps = 11/129 (8%)
Frame = +3
Query: 3 AIMSATNSRIQTLEKELSGMRKYLSESEGSISNRI---DSGRSASFRFSS-ESGNKIERG 170
A M+AT+SRIQ+LE+EL+GM+K L E N I D RSASF + + E+ NKI +G
Sbjct: 351 ATMAATSSRIQSLEEELNGMKKLLDECHEKKENSILLEDGRRSASFHYGTHENSNKITKG 410
Query: 171 ERGSVSSLSLR--NVKEDVVMXXXXXXXXDGCRSVERS---FGRRLVSGLRSAFGL--QK 329
++ S SS S R + K C+ RS RL++GL+ AF +
Sbjct: 411 DKASASSASFRILSGKGSTERSEGTSNWSSSCKGTPRSTKKISERLINGLKKAFRVSGSA 470
Query: 330 KKCESKGAI 356
K+ SK I
Sbjct: 471 KEAASKDKI 479
>gb|EOX91681.1| DNA-directed RNA polymerase II subunit RPB1 isoform 3 [Theobroma
cacao]
Length = 411
Score = 65.5 bits (158), Expect = 7e-09
Identities = 53/133 (39%), Positives = 73/133 (54%), Gaps = 17/133 (12%)
Frame = +3
Query: 3 AIMSATNSRIQTLEKELSGMRKYLSESE--GSIS----NRIDSGRSASFRFSSESGNKIE 164
A M AT+SRIQTLEK+L M+K L +S+ G + + + SGRSASF + SGN IE
Sbjct: 273 AAMDATSSRIQTLEKQLHCMKKILQDSDHNGGVGAGSRDVLGSGRSASFHYG--SGNTIE 330
Query: 165 RGERGSVSSLSLR-NVKEDVVM--XXXXXXXXDGCRSVERSFGRRLVSGLRSAFGL---- 323
R +RG+ SS S R + ED D R ++++ G+RL+ GL+SA +
Sbjct: 331 RADRGASSSASFRFSRPEDKAFGSSSSENSCVDSPR-IKKNIGQRLIEGLKSALRVPNSS 389
Query: 324 ----QKKKCESKG 350
KK SKG
Sbjct: 390 TKNGSAKKISSKG 402
>gb|EOX91679.1| DNA-directed RNA polymerase II subunit RPB1 isoform 1 [Theobroma
cacao] gi|508699784|gb|EOX91680.1| DNA-directed RNA
polymerase II subunit RPB1 isoform 1 [Theobroma cacao]
Length = 475
Score = 65.5 bits (158), Expect = 7e-09
Identities = 53/133 (39%), Positives = 73/133 (54%), Gaps = 17/133 (12%)
Frame = +3
Query: 3 AIMSATNSRIQTLEKELSGMRKYLSESE--GSIS----NRIDSGRSASFRFSSESGNKIE 164
A M AT+SRIQTLEK+L M+K L +S+ G + + + SGRSASF + SGN IE
Sbjct: 337 AAMDATSSRIQTLEKQLHCMKKILQDSDHNGGVGAGSRDVLGSGRSASFHYG--SGNTIE 394
Query: 165 RGERGSVSSLSLR-NVKEDVVM--XXXXXXXXDGCRSVERSFGRRLVSGLRSAFGL---- 323
R +RG+ SS S R + ED D R ++++ G+RL+ GL+SA +
Sbjct: 395 RADRGASSSASFRFSRPEDKAFGSSSSENSCVDSPR-IKKNIGQRLIEGLKSALRVPNSS 453
Query: 324 ----QKKKCESKG 350
KK SKG
Sbjct: 454 TKNGSAKKISSKG 466
>emb|CBI33692.3| unnamed protein product [Vitis vinifera]
Length = 684
Score = 65.5 bits (158), Expect = 7e-09
Identities = 39/66 (59%), Positives = 49/66 (74%)
Frame = +3
Query: 6 IMSATNSRIQTLEKELSGMRKYLSESEGSISNRIDSGRSASFRFSSESGNKIERGERGSV 185
IM AT +RI++LE++L+ M+K L ESE +N + S RSASFR SS NKIERGERGS+
Sbjct: 345 IMGATVTRIKSLEEDLTAMKKTLEESEKQ-ANALGSVRSASFRLSST--NKIERGERGSI 401
Query: 186 SSLSLR 203
SS S R
Sbjct: 402 SSASFR 407
>ref|XP_002525272.1| protein binding protein, putative [Ricinus communis]
gi|223535430|gb|EEF37100.1| protein binding protein,
putative [Ricinus communis]
Length = 396
Score = 62.4 bits (150), Expect = 6e-08
Identities = 41/94 (43%), Positives = 50/94 (53%), Gaps = 22/94 (23%)
Frame = +3
Query: 3 AIMSATNSRIQTLEKELSGMRKYL-----------------SESEGSISNR-----IDSG 116
A M +T SRI+ LEKEL+GM+K L SE E SI R ++S
Sbjct: 274 AEMDSTGSRIKILEKELAGMKKILQKSENERILMEKKLFLGSEKESSIITREERSVMESS 333
Query: 117 RSASFRFSSESGNKIERGERGSVSSLSLRNVKED 218
RSASF + S NKIE+GERGS S LR K +
Sbjct: 334 RSASFHYGSRDANKIEKGERGSTSFAGLRVAKNE 367
>ref|XP_002307320.2| hypothetical protein POPTR_0005s19340g [Populus trichocarpa]
gi|550339312|gb|EEE94316.2| hypothetical protein
POPTR_0005s19340g [Populus trichocarpa]
Length = 479
Score = 57.4 bits (137), Expect = 2e-06
Identities = 46/140 (32%), Positives = 63/140 (45%), Gaps = 14/140 (10%)
Frame = +3
Query: 9 MSATNSRIQTLEKELSGMRKYLSESEGS--------ISNRIDSGRSASFRFSSESGNKIE 164
M +TNSRI++LEKELS M+K L +SE + S RSASF NKIE
Sbjct: 340 MDSTNSRIESLEKELSRMKKLLRKSEKKRSLMEKKPLQKSESSSRSASFHHELRDANKIE 399
Query: 165 RGERGSV--SSLSLRNVKEDVVMXXXXXXXXDGCRSVERS--FGRRLVSGLRSAFGLQK- 329
+GERGS S L +E + + C ++ G+ L+ L+ + K
Sbjct: 400 KGERGSASFSGFRLHFGREKMEGSSRSKFTGNECPRTSKNNINGKGLIDRLKRTLWVSKS 459
Query: 330 -KKCESKGAIKNFERLEDEN 386
KC S+ N EN
Sbjct: 460 DSKCNSRSKYTNTNDGNGEN 479