BLASTX nr result
ID: Rehmannia23_contig00032110
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00032110
(723 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006348079.1| PREDICTED: pentatricopeptide repeat-containi... 218 2e-54
ref|XP_004233795.1| PREDICTED: pentatricopeptide repeat-containi... 213 4e-53
ref|XP_006449088.1| hypothetical protein CICLE_v10018367mg [Citr... 182 1e-43
gb|EOY28616.1| Tetratricopeptide repeat-like superfamily protein... 177 3e-42
ref|XP_002518527.1| pentatricopeptide repeat-containing protein,... 172 8e-41
gb|EMJ13917.1| hypothetical protein PRUPE_ppa018797mg [Prunus pe... 170 5e-40
ref|XP_002305605.1| pentatricopeptide repeat-containing family p... 166 7e-39
ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containi... 158 2e-36
ref|XP_006467990.1| PREDICTED: pentatricopeptide repeat-containi... 137 4e-30
ref|XP_006285106.1| hypothetical protein CARUB_v10006439mg [Caps... 114 3e-23
ref|XP_006413812.1| hypothetical protein EUTSA_v10024760mg [Eutr... 111 2e-22
ref|NP_193849.2| pentatricopeptide repeat-containing protein [Ar... 105 1e-20
sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-c... 105 1e-20
ref|XP_002867861.1| predicted protein [Arabidopsis lyrata subsp.... 92 2e-16
emb|CAA17536.1| putative protein [Arabidopsis thaliana] gi|72689... 80 5e-13
gb|AFV70819.1| tetratricopeptide repeat-like superfamily protein... 76 1e-11
gb|AFV70831.1| tetratricopeptide repeat-like superfamily protein... 75 2e-11
gb|AFV70822.1| tetratricopeptide repeat-like superfamily protein... 75 2e-11
gb|AFV70816.1| tetratricopeptide repeat-like superfamily protein... 75 2e-11
gb|AFV70836.1| tetratricopeptide repeat-like superfamily protein... 75 2e-11
>ref|XP_006348079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21170-like isoform X1 [Solanum tuberosum]
gi|565362693|ref|XP_006348080.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g21170-like isoform X2 [Solanum tuberosum]
gi|565362695|ref|XP_006348081.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g21170-like isoform X3 [Solanum tuberosum]
Length = 584
Score = 218 bits (555), Expect = 2e-54
Identities = 112/218 (51%), Positives = 152/218 (69%), Gaps = 2/218 (0%)
Frame = +1
Query: 76 TNLTPNWRIRIKQRELVSQASTILLQRHSKLWASLLKPLKL-SSNFTP-LFHQILNGIQT 249
T +WRI+ KQ +LVSQ S+ILLQR + W SLLK LKL SS FTP LF QIL+ QT
Sbjct: 24 TQKPQSWRIQFKQTQLVSQISSILLQRQTNQWPSLLKNLKLCSSQFTPSLFLQILHNTQT 83
Query: 250 HPKICYSFYKWAQKTLDFTPDLRAQCRLIRILFGSGQSELGRPILNSIVQDYPPAKIVPL 429
+P++ F+ +A+ L F PD + C L+ IL GSG S+ +PIL++++Q YPPA+IV
Sbjct: 84 NPQVSLRFFDYAKNNLGFQPDAKVLCTLVYILLGSGLSKPAKPILDTLIQTYPPAQIVGF 143
Query: 430 LIQPRKGAAFQNISPVLNSVIVCYCSKQMYCQSLEVYQMGKQYGFGLSVDTCNALLNLLC 609
LIQ K S VL+SV+ CYC+K ++ ++L+VYQ+ ++YG+ +SV+ CN LLNLL
Sbjct: 144 LIQSLKVGEIHIQSSVLSSVLECYCNKGLFLEALQVYQIVREYGYFVSVNCCNTLLNLLL 203
Query: 610 DKNELRLAWCCYASFIRNGVSGDEFTWSVIARVLYKDG 723
KNELRL WC + S IRNGV + TWS+IA++L KDG
Sbjct: 204 SKNELRLGWCYFGSIIRNGVQENVVTWSLIAQMLCKDG 241
>ref|XP_004233795.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21170-like [Solanum lycopersicum]
Length = 584
Score = 213 bits (543), Expect = 4e-53
Identities = 109/218 (50%), Positives = 149/218 (68%), Gaps = 2/218 (0%)
Frame = +1
Query: 76 TNLTPNWRIRIKQRELVSQASTILLQRHSKLWASLLKPLKL-SSNFTP-LFHQILNGIQT 249
T + +WR + KQ +LVSQ S+ILLQR + W LLK LKL SS FTP LF QIL+ Q
Sbjct: 24 TQKSQDWRTQFKQTQLVSQISSILLQRQTNQWPLLLKNLKLCSSQFTPSLFLQILHNTQD 83
Query: 250 HPKICYSFYKWAQKTLDFTPDLRAQCRLIRILFGSGQSELGRPILNSIVQDYPPAKIVPL 429
+P++ F+ +A+ L F PD + C L+ IL GSG S +PIL++++Q YPPA+IV
Sbjct: 84 NPQVSLRFFHYAKNNLGFQPDAKVLCTLVYILLGSGLSRPAKPILDTLIQTYPPAQIVGF 143
Query: 430 LIQPRKGAAFQNISPVLNSVIVCYCSKQMYCQSLEVYQMGKQYGFGLSVDTCNALLNLLC 609
LIQ K S VL+SV+ CYC+K ++ ++L+VYQ+ ++YG+ +SV+ CN LLNLL
Sbjct: 144 LIQSLKAGEIHIQSSVLSSVLECYCNKGLFLEALQVYQIVREYGYFVSVNCCNTLLNLLL 203
Query: 610 DKNELRLAWCCYASFIRNGVSGDEFTWSVIARVLYKDG 723
KN+LRL WC Y S IRNGV + TWS+IA++L KDG
Sbjct: 204 SKNDLRLGWCYYGSIIRNGVQENVVTWSLIAQMLCKDG 241
>ref|XP_006449088.1| hypothetical protein CICLE_v10018367mg [Citrus clementina]
gi|557551699|gb|ESR62328.1| hypothetical protein
CICLE_v10018367mg [Citrus clementina]
Length = 578
Score = 182 bits (461), Expect = 1e-43
Identities = 101/227 (44%), Positives = 146/227 (64%), Gaps = 4/227 (1%)
Frame = +1
Query: 55 KFFKTSETNLTP---NWRIRIKQRELVSQASTILLQRHSKLWASLLKPLKLSSNFTP-LF 222
K F TS T NWR +IK+ +LV Q S+ LLQRH+ W SLL+ L LSS TP LF
Sbjct: 12 KVFSTSTTKAKKTSINWRTQIKRTQLVHQISSTLLQRHN--WPSLLQNLHLSSKLTPSLF 69
Query: 223 HQILNGIQTHPKICYSFYKWAQKTLDFTPDLRAQCRLIRILFGSGQSELGRPILNSIVQD 402
QIL+ + +P++ +F+ W + +L F PDL +QC +IR+L GSGQ+E PIL+S++Q
Sbjct: 70 LQILHKTKHNPQVSLNFFYWIKTSLHFEPDLISQCHIIRLLLGSGQTERINPILDSLIQT 129
Query: 403 YPPAKIVPLLIQPRKGAAFQNISPVLNSVIVCYCSKQMYCQSLEVYQMGKQYGFGLSVDT 582
+ + +IQ +G Q S L+ V+ CY K ++ LEVY+M + YGF +V
Sbjct: 130 HTATVLTHSMIQSCEGRDSQ--SDALSLVLDCYSHKGLFMDGLEVYRMMRVYGFVPAVSA 187
Query: 583 CNALLNLLCDKNELRLAWCCYASFIRNGVSGDEFTWSVIARVLYKDG 723
CNALL+ L +NE+RLA C Y + IR+GVS ++FTWS++A++L + G
Sbjct: 188 CNALLDALYRQNEIRLASCLYGAMIRDGVSPNKFTWSLVAQILCRSG 234
>gb|EOY28616.1| Tetratricopeptide repeat-like superfamily protein, putative
[Theobroma cacao]
Length = 578
Score = 177 bits (449), Expect = 3e-42
Identities = 95/220 (43%), Positives = 139/220 (63%), Gaps = 1/220 (0%)
Frame = +1
Query: 67 TSETNLTPNWRIRIKQRELVSQASTILLQRHSKLWASLLKPLKLSSNFTP-LFHQILNGI 243
T T + +WR +IKQ +LVSQ S+ILLQRH+ WASLL+ L L S TP LF QIL+
Sbjct: 20 TRTTYSSSDWRAQIKQSQLVSQVSSILLQRHN--WASLLRTLNLRSKLTPVLFLQILHKT 77
Query: 244 QTHPKICYSFYKWAQKTLDFTPDLRAQCRLIRILFGSGQSELGRPILNSIVQDYPPAKIV 423
Q HP+I +F+ W + L F PDL++QC +I+I+ GS P +NS++Q +P +
Sbjct: 78 QHHPQISLTFFNWVKTHLGFKPDLKSQCHIIQIVIGSDLCRCVEPAVNSLIQSHPAPIVA 137
Query: 424 PLLIQPRKGAAFQNISPVLNSVIVCYCSKQMYCQSLEVYQMGKQYGFGLSVDTCNALLNL 603
+IQ KG FQ S L+SVI CY ++ + LEV++ + +GF SV CN LL+
Sbjct: 138 DSMIQACKGKNFQ--SSALSSVIKCYSKHGLFMEGLEVFRKMRIHGFTPSVCACNELLDA 195
Query: 604 LCDKNELRLAWCCYASFIRNGVSGDEFTWSVIARVLYKDG 723
L NE++LAW + +R G+ D+F+WS++A++L K+G
Sbjct: 196 LQRGNEVKLAWGFLGAMLRVGIEPDQFSWSLVAQILCKNG 235
>ref|XP_002518527.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223542372|gb|EEF43914.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 599
Score = 172 bits (437), Expect = 8e-41
Identities = 95/224 (42%), Positives = 141/224 (62%), Gaps = 2/224 (0%)
Frame = +1
Query: 58 FFKTSETNLTP-NWRIRIKQRELVSQASTILLQRHSKLWASLLKPLKLSSNFTP-LFHQI 231
F KT T+ + +WR RI+Q +LVS+ STILLQR++ W LL+ L LSS TP LF QI
Sbjct: 30 FRKTYSTSTSKISWRTRIQQNQLVSEISTILLQRNN--WIPLLQNLNLSSKLTPFLFFQI 87
Query: 232 LNGIQTHPKICYSFYKWAQKTLDFTPDLRAQCRLIRILFGSGQSELGRPILNSIVQDYPP 411
L+ QTH +I +F+ WA+ L+F PDL++QC +I++ GS + IL+S+++ YP
Sbjct: 88 LHKTQTHAQISLNFFNWAKTNLNFNPDLKSQCHVIQLSLGSDLPRAAKKILDSLIKTYPS 147
Query: 412 AKIVPLLIQPRKGAAFQNISPVLNSVIVCYCSKQMYCQSLEVYQMGKQYGFGLSVDTCNA 591
+ ++Q +G + ++ LN V+ Y K + + LEVY+ + G SV CN
Sbjct: 148 NLFLETMVQACRGKS--SLLCTLNFVLEFYSHKGSFLEGLEVYKKMRVIGCTPSVHACNV 205
Query: 592 LLNLLCDKNELRLAWCCYASFIRNGVSGDEFTWSVIARVLYKDG 723
LL+ L ++E+RLAWC Y + IR GV D+FTWS++A +L KDG
Sbjct: 206 LLDALQRESEIRLAWCFYCAMIRVGVLPDKFTWSLVAHILCKDG 249
>gb|EMJ13917.1| hypothetical protein PRUPE_ppa018797mg [Prunus persica]
Length = 584
Score = 170 bits (430), Expect = 5e-40
Identities = 94/221 (42%), Positives = 133/221 (60%), Gaps = 1/221 (0%)
Frame = +1
Query: 64 KTSETNLTPNWRIRIKQRELVSQASTILLQRHSKLWASLLKPLKLSSNFTP-LFHQILNG 240
K T + +WR IKQ +L SQ S LLQR + W LL+ L L TP LF QIL+
Sbjct: 9 KAYSTASSLSWRTNIKQAQLASQISYALLQRRN--WVPLLRNLSLFPKLTPALFLQILHK 66
Query: 241 IQTHPKICYSFYKWAQKTLDFTPDLRAQCRLIRILFGSGQSELGRPILNSIVQDYPPAKI 420
Q +P++ F+ WA+ L F PDL++ C++IR+ GSG +PIL+S++Q +P +++
Sbjct: 67 TQNNPQVSLEFFNWAKVNLRFEPDLKSNCQIIRVSLGSGLVRPVKPILDSLIQTHPVSEL 126
Query: 421 VPLLIQPRKGAAFQNISPVLNSVIVCYCSKQMYCQSLEVYQMGKQYGFGLSVDTCNALLN 600
V + KG Q S L+ V+ CY K ++ + LEV++ G SV CNALLN
Sbjct: 127 VQCITLACKGTDSQ--STTLSFVLGCYSRKGLFREGLEVFRKMNVLGCVPSVVACNALLN 184
Query: 601 LLCDKNELRLAWCCYASFIRNGVSGDEFTWSVIARVLYKDG 723
+ +NE+RLAWC Y IRNGV D FTWS++A++L KDG
Sbjct: 185 AIQRENEIRLAWCFYGLMIRNGVLPDRFTWSLVAQILCKDG 225
>ref|XP_002305605.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222848569|gb|EEE86116.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 564
Score = 166 bits (420), Expect = 7e-39
Identities = 86/211 (40%), Positives = 137/211 (64%), Gaps = 1/211 (0%)
Frame = +1
Query: 94 WRIRIKQRELVSQASTILLQRHSKLWASLLKPLKLSSNFTP-LFHQILNGIQTHPKICYS 270
WRI+I+Q +LV Q S+ILLQRH+ W SLL+ LS+ TP LF+QIL+ QT+P+I
Sbjct: 14 WRIQIRQNQLVFQISSILLQRHN--WVSLLQNFNLSTKLTPPLFNQILHKTQTNPQISLR 71
Query: 271 FYKWAQKTLDFTPDLRAQCRLIRILFGSGQSELGRPILNSIVQDYPPAKIVPLLIQPRKG 450
F+ W Q L PDL++QC +I I SG + RPI++S+V+ + + + ++ +G
Sbjct: 72 FFNWVQTNLKLKPDLKSQCHIINICVNSGLTLPVRPIMDSLVKTHHVSVLGEAMVDSCRG 131
Query: 451 AAFQNISPVLNSVIVCYCSKQMYCQSLEVYQMGKQYGFGLSVDTCNALLNLLCDKNELRL 630
+ + S + V+ CY K ++ +SLE+++ + GF S CN++L++L +NE++L
Sbjct: 132 KSLK--SDAFSFVLECYSHKGLFMESLEMFRKMRGNGFIASGTACNSVLDVLQRENEIKL 189
Query: 631 AWCCYASFIRNGVSGDEFTWSVIARVLYKDG 723
AWC Y + I++GV D+ TWS+IA++L KDG
Sbjct: 190 AWCFYCAMIKDGVLPDKLTWSLIAQILCKDG 220
>ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21170-like [Vitis vinifera]
Length = 569
Score = 158 bits (399), Expect = 2e-36
Identities = 97/231 (41%), Positives = 140/231 (60%), Gaps = 1/231 (0%)
Frame = +1
Query: 34 PENPTEPKFFKTSETNLTPNWRIRIKQRELVSQASTILLQRHSKLWASLLKPLKLSSNFT 213
P+ T F S T L NWR +IKQ +L+SQ S+ILLQRH+ W +LL+ LSS T
Sbjct: 4 PKPNTSFNQFSKSTTPL--NWRAQIKQNQLISQISSILLQRHN--WVTLLRNFNLSSKLT 59
Query: 214 P-LFHQILNGIQTHPKICYSFYKWAQKTLDFTPDLRAQCRLIRILFGSGQSELGRPILNS 390
P LFHQIL Q +P+ SF+ W + L F PDL A ++IRI SG + + IL+S
Sbjct: 60 PSLFHQILLKTQKNPQSSLSFFNWVRTNLGFQPDLAAHSQIIRISIQSGLFQPAKGILDS 119
Query: 391 IVQDYPPAKIVPLLIQPRKGAAFQNISPVLNSVIVCYCSKQMYCQSLEVYQMGKQYGFGL 570
+++ + +V +IQ +G + SPVL V+ CY SK ++ ++LEV++ +G+
Sbjct: 120 LIETQKVSVLVDSVIQACRGKDSE--SPVLGFVLECYSSKGLFIEALEVFRRITIHGYVP 177
Query: 571 SVDTCNALLNLLCDKNELRLAWCCYASFIRNGVSGDEFTWSVIARVLYKDG 723
SV +CNALL+ L +NE++LAWC + IRNGV D + IA +L K+G
Sbjct: 178 SVRSCNALLDSLQRENEIKLAWCVCGALIRNGVLPD---YVRIALILCKNG 225
>ref|XP_006467990.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21170-like [Citrus sinensis]
Length = 538
Score = 137 bits (345), Expect = 4e-30
Identities = 83/227 (36%), Positives = 122/227 (53%), Gaps = 4/227 (1%)
Frame = +1
Query: 55 KFFKTSETNLTP---NWRIRIKQRELVSQASTILLQRHSKLWASLLKPLKLSSNFTP-LF 222
K F TS T NWR +IK+ +LV Q S+ LLQRH+ W SLL+ L LSS TP LF
Sbjct: 12 KVFSTSTTKAKKTSINWRTQIKRTQLVHQISSTLLQRHN--WPSLLQNLHLSSKLTPSLF 69
Query: 223 HQILNGIQTHPKICYSFYKWAQKTLDFTPDLRAQCRLIRILFGSGQSELGRPILNSIVQD 402
QIL+ + +P++ +F+ W + +L F PDL +QC +IR+L GSGQ+E +P L+S++Q
Sbjct: 70 LQILHKTKHNPQVSLNFFYWIKTSLHFEPDLISQCHIIRLLLGSGQTERIKPSLDSLIQT 129
Query: 403 YPPAKIVPLLIQPRKGAAFQNISPVLNSVIVCYCSKQMYCQSLEVYQMGKQYGFGLSVDT 582
+ + +IQ V
Sbjct: 130 HTATVLTHSMIQ------------------------------------------SCEVSA 147
Query: 583 CNALLNLLCDKNELRLAWCCYASFIRNGVSGDEFTWSVIARVLYKDG 723
CNALL+ L +NE+RLA C Y + +R+GVS ++FTWS++A++L + G
Sbjct: 148 CNALLDALYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSG 194
>ref|XP_006285106.1| hypothetical protein CARUB_v10006439mg [Capsella rubella]
gi|482553811|gb|EOA18004.1| hypothetical protein
CARUB_v10006439mg [Capsella rubella]
Length = 585
Score = 114 bits (285), Expect = 3e-23
Identities = 74/236 (31%), Positives = 124/236 (52%), Gaps = 10/236 (4%)
Frame = +1
Query: 46 TEPKFFKTSETNLTPN------WRIRIKQRELVSQASTILLQRHSKLWASLLKPLKL--- 198
T F K T+ TP+ W+ ++ + ++ S+ILLQR + W + L+ +K
Sbjct: 6 TSAGFIKRFSTSATPSTSSASDWKTQLNLSRVATEISSILLQRRN--WITHLQYVKSKLP 63
Query: 199 -SSNFTPLFHQILNGIQTHPKICYSFYKWAQKTLDFTPDLRAQCRLIRILFGSGQSELGR 375
S+ P+F QIL + PKI F+ +AQ L F PD+++QCR+I + SG E
Sbjct: 64 KSTLTPPVFLQILRETRKCPKITLDFFDFAQTHLHFDPDVKSQCRVIEVATESGLLERAE 123
Query: 376 PILNSIVQDYPPAKIVPLLIQPRKGAAFQNISPVLNSVIVCYCSKQMYCQSLEVYQMGKQ 555
+L +V+ + +V L + +G +IS L+ V+ CY K Y LEV+ ++
Sbjct: 124 TLLRPLVETNSVSLVVGSLQKCCEGEVSLSIS--LSLVLECYALKGCYQNGLEVFGFMRR 181
Query: 556 YGFGLSVDTCNALLNLLCDKNELRLAWCCYASFIRNGVSGDEFTWSVIARVLYKDG 723
S+ N+LL+ L + + R+A C Y++ +RN V D FTW ++A++L + G
Sbjct: 182 LRLSPSLRAYNSLLDSLIKEGQFRVALCLYSAMVRNQVVSDGFTWDLVAQILCEQG 237
>ref|XP_006413812.1| hypothetical protein EUTSA_v10024760mg [Eutrema salsugineum]
gi|557114982|gb|ESQ55265.1| hypothetical protein
EUTSA_v10024760mg [Eutrema salsugineum]
Length = 584
Score = 111 bits (278), Expect = 2e-22
Identities = 71/232 (30%), Positives = 120/232 (51%), Gaps = 10/232 (4%)
Frame = +1
Query: 58 FFKTSETNLTPN------WRIRIKQRELVSQASTILLQRHSKLWASLLKPLKL----SSN 207
FFK T+ TP+ W+ ++ L ++ S+ILLQR W + LK +K S+
Sbjct: 10 FFKRFSTSATPSTSSASDWKTQVSLFRLATEISSILLQRRD--WITHLKHVKSKLPRSTL 67
Query: 208 FTPLFHQILNGIQTHPKICYSFYKWAQKTLDFTPDLRAQCRLIRILFGSGQSELGRPILN 387
P+F +IL + PK F+ WA+ L F PDL++ CR+I++ +G E +
Sbjct: 68 TPPIFLRILRETRKSPKTTLDFFDWAKTHLRFEPDLKSCCRVIQVATETGLLERAEAFVR 127
Query: 388 SIVQDYPPAKIVPLLIQPRKGAAFQNISPVLNSVIVCYCSKQMYCQSLEVYQMGKQYGFG 567
+++ + IV + + +G ++S L+ V+ CY K Y LEV+ ++
Sbjct: 128 PLIETHSVCVIVGSMHRWFEGEV--SLSTSLSLVLECYALKGSYQNGLEVFGSMRRLRLS 185
Query: 568 LSVDTCNALLNLLCDKNELRLAWCCYASFIRNGVSGDEFTWSVIARVLYKDG 723
S+ N+LL+ L + + RLA C Y++ +RN V D TW ++A+VL + G
Sbjct: 186 PSLRAYNSLLDSLVKEKQFRLALCLYSAMVRNRVVSDGLTWDLVAQVLCEQG 237
>ref|NP_193849.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332659015|gb|AEE84415.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 551
Score = 105 bits (263), Expect = 1e-20
Identities = 71/236 (30%), Positives = 122/236 (51%), Gaps = 10/236 (4%)
Frame = +1
Query: 46 TEPKFFKTSETNLTPN------WRIRIKQRELVSQASTILLQRHSKLWASLLKPLKL--- 198
T FFK T+ TP+ W+ + + ++ S+ILLQR + W + L+ +K
Sbjct: 6 TSVGFFKRFSTSATPSTSSASDWKTQQTLFRVATEISSILLQRRN--WITHLQYVKSKLP 63
Query: 199 -SSNFTPLFHQILNGIQTHPKICYSFYKWAQKTLDFTPDLRAQCRLIRILFGSGQSELGR 375
S+ +P+F QIL + PK F+ +A+ L F PDL++ CR+I + SG E
Sbjct: 64 RSTLTSPVFLQILRETRKCPKTTLDFFDFAKTHLRFEPDLKSHCRVIEVAAESGLLERAE 123
Query: 376 PILNSIVQDYPPAKIVPLLIQPRKGAAFQNISPVLNSVIVCYCSKQMYCQSLEVYQMGKQ 555
+L +V+ + +V + + +G ++S L+ V+ Y K + LEV+ ++
Sbjct: 124 MLLRPLVETNSVSLVVGEMHRWFEGEVSLSVS--LSLVLEYYALKGSHHNGLEVFGFMRR 181
Query: 556 YGFGLSVDTCNALLNLLCDKNELRLAWCCYASFIRNGVSGDEFTWSVIARVLYKDG 723
S N+LL L +N+ R+A C Y++ +RNG+ DE TW +IA++L + G
Sbjct: 182 LRLSPSQSAYNSLLGSLVKENQFRVALCLYSAMVRNGIVSDELTWDLIAQILCEQG 237
>sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21170
Length = 585
Score = 105 bits (263), Expect = 1e-20
Identities = 71/236 (30%), Positives = 122/236 (51%), Gaps = 10/236 (4%)
Frame = +1
Query: 46 TEPKFFKTSETNLTPN------WRIRIKQRELVSQASTILLQRHSKLWASLLKPLKL--- 198
T FFK T+ TP+ W+ + + ++ S+ILLQR + W + L+ +K
Sbjct: 6 TSVGFFKRFSTSATPSTSSASDWKTQQTLFRVATEISSILLQRRN--WITHLQYVKSKLP 63
Query: 199 -SSNFTPLFHQILNGIQTHPKICYSFYKWAQKTLDFTPDLRAQCRLIRILFGSGQSELGR 375
S+ +P+F QIL + PK F+ +A+ L F PDL++ CR+I + SG E
Sbjct: 64 RSTLTSPVFLQILRETRKCPKTTLDFFDFAKTHLRFEPDLKSHCRVIEVAAESGLLERAE 123
Query: 376 PILNSIVQDYPPAKIVPLLIQPRKGAAFQNISPVLNSVIVCYCSKQMYCQSLEVYQMGKQ 555
+L +V+ + +V + + +G ++S L+ V+ Y K + LEV+ ++
Sbjct: 124 MLLRPLVETNSVSLVVGEMHRWFEGEVSLSVS--LSLVLEYYALKGSHHNGLEVFGFMRR 181
Query: 556 YGFGLSVDTCNALLNLLCDKNELRLAWCCYASFIRNGVSGDEFTWSVIARVLYKDG 723
S N+LL L +N+ R+A C Y++ +RNG+ DE TW +IA++L + G
Sbjct: 182 LRLSPSQSAYNSLLGSLVKENQFRVALCLYSAMVRNGIVSDELTWDLIAQILCEQG 237
>ref|XP_002867861.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313697|gb|EFH44120.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 534
Score = 91.7 bits (226), Expect = 2e-16
Identities = 66/214 (30%), Positives = 108/214 (50%), Gaps = 10/214 (4%)
Frame = +1
Query: 46 TEPKFFKTSETNLTPN------WRIRIKQRELVSQASTILLQRHSKLWASLLKPLKL--- 198
T FFK T+ TP+ W+ + L ++ S+ILLQR + W S L+ +K
Sbjct: 6 TSVGFFKRFSTSATPSTSSASDWKTQQTLFRLATEISSILLQRRN--WISHLQYVKSKLP 63
Query: 199 -SSNFTPLFHQILNGIQTHPKICYSFYKWAQKTLDFTPDLRAQCRLIRILFGSGQSELGR 375
S+ +P+F QI+ + PK F+ +A+ L F PDL++ CR+I + SG E
Sbjct: 64 RSTLTSPIFLQIIRETRKCPKTTLDFFDFAKTHLRFEPDLKSHCRVIEVATESGLLERAE 123
Query: 376 PILNSIVQDYPPAKIVPLLIQPRKGAAFQNISPVLNSVIVCYCSKQMYCQSLEVYQMGKQ 555
+L +V+ + + +V + + +G +IS L+ VI CY K Y LEV+ ++
Sbjct: 124 TLLRPLVETHSVSLVVGSMHRWFEGDVSLSIS--LSLVIECYALKGCYQNGLEVFGFMRR 181
Query: 556 YGFGLSVDTCNALLNLLCDKNELRLAWCCYASFI 657
S N+LL L +N+ R+A C Y++ I
Sbjct: 182 LRLSPSQSAYNSLLGSLVKENQFRVALCLYSAMI 215
>emb|CAA17536.1| putative protein [Arabidopsis thaliana] gi|7268914|emb|CAB79117.1|
putative protein [Arabidopsis thaliana]
Length = 534
Score = 80.5 bits (197), Expect = 5e-13
Identities = 61/214 (28%), Positives = 106/214 (49%), Gaps = 10/214 (4%)
Frame = +1
Query: 46 TEPKFFKTSETNLTPN------WRIRIKQRELVSQASTILLQRHSKLWASLLKPLKL--- 198
T FFK T+ TP+ W+ + + ++ S+ILLQR + W + L+ +K
Sbjct: 6 TSVGFFKRFSTSATPSTSSASDWKTQQTLFRVATEISSILLQRRN--WITHLQYVKSKLP 63
Query: 199 -SSNFTPLFHQILNGIQTHPKICYSFYKWAQKTLDFTPDLRAQCRLIRILFGSGQSELGR 375
S+ +P+F QIL + PK F+ +A+ L F PDL++ CR+I + SG E
Sbjct: 64 RSTLTSPVFLQILRETRKCPKTTLDFFDFAKTHLRFEPDLKSHCRVIEVAAESGLLERAE 123
Query: 376 PILNSIVQDYPPAKIVPLLIQPRKGAAFQNISPVLNSVIVCYCSKQMYCQSLEVYQMGKQ 555
+L +V+ + +V + + +G ++S L+ V+ Y K + LEV+ ++
Sbjct: 124 MLLRPLVETNSVSLVVGEMHRWFEGEVSLSVS--LSLVLEYYALKGSHHNGLEVFGFMRR 181
Query: 556 YGFGLSVDTCNALLNLLCDKNELRLAWCCYASFI 657
S N+LL L +N+ R+A C Y++ I
Sbjct: 182 LRLSPSQSAYNSLLGSLVKENQFRVALCLYSAMI 215
>gb|AFV70819.1| tetratricopeptide repeat-like superfamily protein, partial
[Arabidopsis halleri]
Length = 186
Score = 75.9 bits (185), Expect = 1e-11
Identities = 54/184 (29%), Positives = 93/184 (50%), Gaps = 4/184 (2%)
Frame = +1
Query: 67 TSETNLTPNWRIRIKQRELVSQASTILLQRHSKLWASLLKPLKL----SSNFTPLFHQIL 234
T T+ NW+ + L ++ S+ILLQR + W + L+ +K S+ +P+F QIL
Sbjct: 6 TPSTSSASNWKTQQTLFRLATEISSILLQRRN--WITHLQYVKSKLSRSTLTSPIFLQIL 63
Query: 235 NGIQTHPKICYSFYKWAQKTLDFTPDLRAQCRLIRILFGSGQSELGRPILNSIVQDYPPA 414
+ PK F+ +A+ L F PDL++ CR+I + SG E +L +V+ + +
Sbjct: 64 RETRKCPKTTLDFFDFAKTHLRFDPDLKSHCRVIEVATESGLLERAETLLRPLVETHSVS 123
Query: 415 KIVPLLIQPRKGAAFQNISPVLNSVIVCYCSKQMYCQSLEVYQMGKQYGFGLSVDTCNAL 594
+V + + +G ++S L+ V+ CY K Y LEV+ ++ S+ N+L
Sbjct: 124 LVVGSMHRWFEGEVSLSVS--LSLVLECYALKGCYQNGLEVFGFMRRLRLSPSLRAYNSL 181
Query: 595 LNLL 606
L L
Sbjct: 182 LGSL 185
>gb|AFV70831.1| tetratricopeptide repeat-like superfamily protein, partial
[Arabidopsis halleri]
Length = 186
Score = 75.5 bits (184), Expect = 2e-11
Identities = 54/184 (29%), Positives = 92/184 (50%), Gaps = 4/184 (2%)
Frame = +1
Query: 67 TSETNLTPNWRIRIKQRELVSQASTILLQRHSKLWASLLKPLKL----SSNFTPLFHQIL 234
T T+ NW+ + L ++ S+ILLQR + W + L+ +K S+ +P+F QIL
Sbjct: 6 TPSTSSASNWKSQKTLFRLATEISSILLQRRN--WITHLQYVKSKLSRSTLTSPIFLQIL 63
Query: 235 NGIQTHPKICYSFYKWAQKTLDFTPDLRAQCRLIRILFGSGQSELGRPILNSIVQDYPPA 414
+ PK F+ +A+ L F PDL++ CR+I + SG E +L +V+ + +
Sbjct: 64 RETRKCPKTTLDFFDFAKTHLRFDPDLKSHCRVIEVATESGLLERAETLLRPLVETHSVS 123
Query: 415 KIVPLLIQPRKGAAFQNISPVLNSVIVCYCSKQMYCQSLEVYQMGKQYGFGLSVDTCNAL 594
+V + + +G ++S L+ V+ CY K Y LEV+ ++ S N+L
Sbjct: 124 LVVGSMHRWFEGEVSLSVS--LSLVLECYALKGCYQNGLEVFGFMRRLRISRSQSAYNSL 181
Query: 595 LNLL 606
L L
Sbjct: 182 LGSL 185
>gb|AFV70822.1| tetratricopeptide repeat-like superfamily protein, partial
[Arabidopsis halleri]
Length = 186
Score = 75.5 bits (184), Expect = 2e-11
Identities = 54/184 (29%), Positives = 92/184 (50%), Gaps = 4/184 (2%)
Frame = +1
Query: 67 TSETNLTPNWRIRIKQRELVSQASTILLQRHSKLWASLLKPLKL----SSNFTPLFHQIL 234
T T+ NW+ + L ++ S+ILLQR + W + L+ +K S+ +P+F QIL
Sbjct: 6 TPSTSSASNWKTQQTLFRLATEISSILLQRRN--WITHLQYVKSKLSRSTLTSPIFLQIL 63
Query: 235 NGIQTHPKICYSFYKWAQKTLDFTPDLRAQCRLIRILFGSGQSELGRPILNSIVQDYPPA 414
+ PK F+ +A+ L F PDL++ CR+I + SG E +L +V+ + +
Sbjct: 64 RETRKCPKTTLDFFDFAKTHLRFDPDLKSHCRVIEVATESGLLERAETLLRPLVETHSVS 123
Query: 415 KIVPLLIQPRKGAAFQNISPVLNSVIVCYCSKQMYCQSLEVYQMGKQYGFGLSVDTCNAL 594
+V + + +G ++S L+ V+ CY K Y LEV+ ++ S N+L
Sbjct: 124 LVVGSMHRWFEGEVSLSVS--LSLVLECYALKGCYQNGLEVFGFMRRLRISPSQSAYNSL 181
Query: 595 LNLL 606
L L
Sbjct: 182 LGSL 185
>gb|AFV70816.1| tetratricopeptide repeat-like superfamily protein, partial
[Arabidopsis halleri]
Length = 186
Score = 75.5 bits (184), Expect = 2e-11
Identities = 54/184 (29%), Positives = 93/184 (50%), Gaps = 4/184 (2%)
Frame = +1
Query: 67 TSETNLTPNWRIRIKQRELVSQASTILLQRHSKLWASLLKPLKL----SSNFTPLFHQIL 234
T T+ NW+ + L ++ S+ILLQR + W + L+ +K S+ +P+F QIL
Sbjct: 6 TPSTSSASNWKXQQTLFRLATEISSILLQRRN--WITHLQYVKSKLSRSTLTSPIFLQIL 63
Query: 235 NGIQTHPKICYSFYKWAQKTLDFTPDLRAQCRLIRILFGSGQSELGRPILNSIVQDYPPA 414
+ PK F+ +A+ L F PDL++ CR+I + SG E +L +V+ + +
Sbjct: 64 RETRKCPKTTLDFFDFAKTHLRFDPDLKSHCRVIEVATESGLLERAETLLRPLVEXHSVS 123
Query: 415 KIVPLLIQPRKGAAFQNISPVLNSVIVCYCSKQMYCQSLEVYQMGKQYGFGLSVDTCNAL 594
+V + + +G ++S L+ V+ CY K Y LEV+ ++ S+ N+L
Sbjct: 124 LVVGSMHRWFEGEVSLSVS--LSLVLECYALKGCYQNGLEVFGFMRRLRLSPSLRAYNSL 181
Query: 595 LNLL 606
L L
Sbjct: 182 LXSL 185
>gb|AFV70836.1| tetratricopeptide repeat-like superfamily protein, partial
[Arabidopsis halleri]
Length = 186
Score = 75.1 bits (183), Expect = 2e-11
Identities = 54/184 (29%), Positives = 92/184 (50%), Gaps = 4/184 (2%)
Frame = +1
Query: 67 TSETNLTPNWRIRIKQRELVSQASTILLQRHSKLWASLLKPLKL----SSNFTPLFHQIL 234
T T+ NW+ + L ++ S+ILLQR + W + L+ +K S+ +P+F QIL
Sbjct: 6 TPSTSSASNWKSQQTLFRLATEISSILLQRRN--WITHLQYVKSKLPRSTLTSPIFLQIL 63
Query: 235 NGIQTHPKICYSFYKWAQKTLDFTPDLRAQCRLIRILFGSGQSELGRPILNSIVQDYPPA 414
+ PK F+ +A+ L F PDL++ CR+I + SG E +L +V+ + +
Sbjct: 64 RETRKCPKTTLDFFDFAKTHLRFDPDLKSHCRVIEVATESGLLERAETLLRPLVETHSVS 123
Query: 415 KIVPLLIQPRKGAAFQNISPVLNSVIVCYCSKQMYCQSLEVYQMGKQYGFGLSVDTCNAL 594
+V + + +G ++S L+ V+ CY K Y LEV+ ++ S N+L
Sbjct: 124 LVVGSMHRWFEGEVSLSVS--LSLVLECYALKGCYQNGLEVFGFMRRLRISPSQSAYNSL 181
Query: 595 LNLL 606
L L
Sbjct: 182 LGSL 185