BLASTX nr result
ID: Rehmannia23_contig00032023
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00032023
(487 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006449088.1| hypothetical protein CICLE_v10018367mg [Citr... 168 6e-40
ref|XP_002305605.1| pentatricopeptide repeat-containing family p... 167 1e-39
ref|XP_006467990.1| PREDICTED: pentatricopeptide repeat-containi... 165 5e-39
ref|XP_002518527.1| pentatricopeptide repeat-containing protein,... 162 6e-38
gb|EMJ13917.1| hypothetical protein PRUPE_ppa018797mg [Prunus pe... 161 7e-38
gb|EOY28616.1| Tetratricopeptide repeat-like superfamily protein... 160 2e-37
ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containi... 159 5e-37
ref|XP_006348079.1| PREDICTED: pentatricopeptide repeat-containi... 151 1e-34
ref|XP_004233795.1| PREDICTED: pentatricopeptide repeat-containi... 149 3e-34
ref|XP_006285106.1| hypothetical protein CARUB_v10006439mg [Caps... 145 7e-33
ref|XP_006413812.1| hypothetical protein EUTSA_v10024760mg [Eutr... 142 5e-32
sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-c... 140 2e-31
ref|XP_006857674.1| hypothetical protein AMTR_s00061p00160470 [A... 121 1e-25
ref|XP_006826483.1| hypothetical protein AMTR_s00004p00243870 [A... 119 3e-25
ref|NP_193849.2| pentatricopeptide repeat-containing protein [Ar... 105 6e-21
emb|CAA17536.1| putative protein [Arabidopsis thaliana] gi|72689... 105 6e-21
ref|XP_002867861.1| predicted protein [Arabidopsis lyrata subsp.... 102 5e-20
ref|XP_004296042.1| PREDICTED: putative pentatricopeptide repeat... 85 1e-14
ref|XP_004295937.1| PREDICTED: putative pentatricopeptide repeat... 83 4e-14
ref|XP_004295753.1| PREDICTED: putative pentatricopeptide repeat... 82 6e-14
>ref|XP_006449088.1| hypothetical protein CICLE_v10018367mg [Citrus clementina]
gi|557551699|gb|ESR62328.1| hypothetical protein
CICLE_v10018367mg [Citrus clementina]
Length = 578
Score = 168 bits (426), Expect = 6e-40
Identities = 76/140 (54%), Positives = 104/140 (74%)
Frame = -1
Query: 487 YVNKQCAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGKAITLHDKLEDLK 308
+V QC +G+W+E EEL ++DQG LLDS C ++ YCS R+I KAI LH K+E LK
Sbjct: 434 FVASQCGKGKWKEVEELLSAVLDQGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 493
Query: 307 GTLDTAIYSIFLASLFKEKRIEEAIKVFDYMKACKQLNSESFSVMIRGLCHEKELRKAMK 128
G+LD A Y + L LFK+ R+EEA+++FDYMK K ++S SF +++ LCH KELRKAMK
Sbjct: 494 GSLDVATYDVLLDGLFKDGRMEEAVQIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMK 553
Query: 127 LHDEMLELGLKPDQRTYKRL 68
+HDEML++G KPD+ TYK++
Sbjct: 554 IHDEMLKMGHKPDEATYKQV 573
>ref|XP_002305605.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222848569|gb|EEE86116.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 564
Score = 167 bits (424), Expect = 1e-39
Identities = 78/131 (59%), Positives = 100/131 (76%)
Frame = -1
Query: 460 RWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGKAITLHDKLEDLKGTLDTAIYS 281
RWRE E+L DL++++G L DS C V+ YCSRR+I KA+ LH+K+E L+ +LD A Y+
Sbjct: 428 RWREVEDLLDLVLEKGLLPDSLCCCSLVEHYCSRRQIDKAVALHNKMEKLQASLDVATYN 487
Query: 280 IFLASLFKEKRIEEAIKVFDYMKACKQLNSESFSVMIRGLCHEKELRKAMKLHDEMLELG 101
I L L K RIEE ++VFDYMK K +NSESF++ IRGLC KE+RKAMKLHDEML++G
Sbjct: 488 ILLDGLVKNGRIEEVVRVFDYMKGLKLVNSESFTITIRGLCRAKEMRKAMKLHDEMLDMG 547
Query: 100 LKPDQRTYKRL 68
LKPD+ YKRL
Sbjct: 548 LKPDKAAYKRL 558
>ref|XP_006467990.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21170-like [Citrus sinensis]
Length = 538
Score = 165 bits (418), Expect = 5e-39
Identities = 75/140 (53%), Positives = 103/140 (73%)
Frame = -1
Query: 487 YVNKQCAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGKAITLHDKLEDLK 308
+V QC +G+W+E EEL ++D+G LLDS C ++ YCS R+I KAI LH K+E LK
Sbjct: 394 FVASQCGKGKWKEVEELLSAVLDKGLLLDSFCCSSLMEYYCSNRQIDKAIALHIKIEKLK 453
Query: 307 GTLDTAIYSIFLASLFKEKRIEEAIKVFDYMKACKQLNSESFSVMIRGLCHEKELRKAMK 128
G+LD A Y + L LFK+ R+EEA+++FDYMK K ++S SF +++ LCH KELRKAMK
Sbjct: 454 GSLDVATYDVLLDGLFKDGRMEEAVRIFDYMKELKVVSSSSFVIVVSRLCHLKELRKAMK 513
Query: 127 LHDEMLELGLKPDQRTYKRL 68
HDEML++G KPD+ TYK++
Sbjct: 514 NHDEMLKMGHKPDEATYKQV 533
>ref|XP_002518527.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223542372|gb|EEF43914.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 599
Score = 162 bits (409), Expect = 6e-38
Identities = 78/140 (55%), Positives = 101/140 (72%)
Frame = -1
Query: 487 YVNKQCAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGKAITLHDKLEDLK 308
Y+ C + RW+EAEEL +++++G L D+ S VK YCS ++ KA+ LH+ LE L+
Sbjct: 448 YITLLCKKRRWKEAEELLYMVLEKGLLPDTLSFCSLVKHYCSSKQTDKALALHNTLEKLQ 507
Query: 307 GTLDTAIYSIFLASLFKEKRIEEAIKVFDYMKACKQLNSESFSVMIRGLCHEKELRKAMK 128
+LD Y++ L L KE R+EE+IKVFDYMK K NS SF+V+IRGLC KELRKAMK
Sbjct: 508 ASLDITAYNLLLGGLVKEGRVEESIKVFDYMKGLKLANSASFTVIIRGLCRAKELRKAMK 567
Query: 127 LHDEMLELGLKPDQRTYKRL 68
LHDEML +GLKPD+ TYKRL
Sbjct: 568 LHDEMLNMGLKPDKPTYKRL 587
>gb|EMJ13917.1| hypothetical protein PRUPE_ppa018797mg [Prunus persica]
Length = 584
Score = 161 bits (408), Expect = 7e-38
Identities = 76/140 (54%), Positives = 102/140 (72%)
Frame = -1
Query: 487 YVNKQCAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGKAITLHDKLEDLK 308
+++ C GRWREAE L ++++D+G L D C V RYCS R+I AI LH+K+E L
Sbjct: 424 FISFLCRRGRWREAEYLLNVVLDKGLLPDLICCSPLVGRYCSGRQIDSAIALHNKMEKLN 483
Query: 307 GTLDTAIYSIFLASLFKEKRIEEAIKVFDYMKACKQLNSESFSVMIRGLCHEKELRKAMK 128
G+LD Y++ L+ LF +RIEEA++VFDYM+ ++S SF++MIRGLC KELRKAMK
Sbjct: 484 GSLDVTTYNVLLSGLFAARRIEEAMRVFDYMRRHNLMSSASFTIMIRGLCGVKELRKAMK 543
Query: 127 LHDEMLELGLKPDQRTYKRL 68
+HDEML++ LKPD TYKRL
Sbjct: 544 IHDEMLKMRLKPDAATYKRL 563
>gb|EOY28616.1| Tetratricopeptide repeat-like superfamily protein, putative
[Theobroma cacao]
Length = 578
Score = 160 bits (404), Expect = 2e-37
Identities = 70/140 (50%), Positives = 103/140 (73%)
Frame = -1
Query: 487 YVNKQCAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGKAITLHDKLEDLK 308
Y++ QC++ WR+AEEL DL++++G L DS C ++ YC R++ K + LHDK+E +K
Sbjct: 434 YISSQCSQMNWRKAEELLDLMLEKGLLPDSFGCCLLIQYYCFNRQVDKIVALHDKMEKVK 493
Query: 307 GTLDTAIYSIFLASLFKEKRIEEAIKVFDYMKACKQLNSESFSVMIRGLCHEKELRKAMK 128
G LD Y++ L L+ E++ EEA++V+DYM ++S SF++MIR LCH KE++KAMK
Sbjct: 494 GCLDVTTYNMILDVLWGERKAEEAVRVYDYMTGLNLVDSASFTIMIRELCHMKEMKKAMK 553
Query: 127 LHDEMLELGLKPDQRTYKRL 68
+HDEML +GLKPD+ TYKRL
Sbjct: 554 IHDEMLNMGLKPDKGTYKRL 573
>ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21170-like [Vitis vinifera]
Length = 569
Score = 159 bits (401), Expect = 5e-37
Identities = 71/140 (50%), Positives = 102/140 (72%)
Frame = -1
Query: 487 YVNKQCAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGKAITLHDKLEDLK 308
++ C GRW EA++L ++ +++G L DS C V+ YC R+I +I LH+K++ +K
Sbjct: 425 FITSLCKNGRWTEADDLLNVTIEKGLLPDSFCCSALVEHYCRSRQIDSSIALHEKIKKVK 484
Query: 307 GTLDTAIYSIFLASLFKEKRIEEAIKVFDYMKACKQLNSESFSVMIRGLCHEKELRKAMK 128
G+LD A Y++ L LF EKRIE+A+ VFD M++ L+S SF++M+ GLC E+ELRKAMK
Sbjct: 485 GSLDVATYNVLLNGLFMEKRIEDAVSVFDCMRSQNLLSSTSFTIMVSGLCRERELRKAMK 544
Query: 127 LHDEMLELGLKPDQRTYKRL 68
HDEML++GLKPD+ TYKRL
Sbjct: 545 FHDEMLKMGLKPDRATYKRL 564
>ref|XP_006348079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21170-like isoform X1 [Solanum tuberosum]
gi|565362693|ref|XP_006348080.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g21170-like isoform X2 [Solanum tuberosum]
gi|565362695|ref|XP_006348081.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g21170-like isoform X3 [Solanum tuberosum]
Length = 584
Score = 151 bits (381), Expect = 1e-34
Identities = 72/140 (51%), Positives = 97/140 (69%)
Frame = -1
Query: 487 YVNKQCAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGKAITLHDKLEDLK 308
++ QC + +W+EAEEL ++I + +S C V+ YC R I AI+LH +LE L
Sbjct: 440 FIVSQCEKRQWKEAEELLNVIFQRRLQFESFCCCSLVRHYCFSRRIDSAISLHTELERLG 499
Query: 307 GTLDTAIYSIFLASLFKEKRIEEAIKVFDYMKACKQLNSESFSVMIRGLCHEKELRKAMK 128
LD Y + L SLFK +R EEA+K+FDYM+ L+SESFS+MIRGLC E+E RKAM+
Sbjct: 500 VALDVETYGLLLDSLFKSRRREEALKIFDYMRTHDMLSSESFSIMIRGLCQEQEFRKAMR 559
Query: 127 LHDEMLELGLKPDQRTYKRL 68
LHD+ML+LG KPD++ YKRL
Sbjct: 560 LHDDMLKLGFKPDKKAYKRL 579
>ref|XP_004233795.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21170-like [Solanum lycopersicum]
Length = 584
Score = 149 bits (377), Expect = 3e-34
Identities = 71/140 (50%), Positives = 96/140 (68%)
Frame = -1
Query: 487 YVNKQCAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGKAITLHDKLEDLK 308
++ QC + +W+EAEEL ++I +G +S C V+ YC R I AI+LH +LE L
Sbjct: 440 FIVSQCEKHQWKEAEELLNVIFQKGLQFESFCCCSLVRHYCFSRRIDSAISLHTELERLG 499
Query: 307 GTLDTAIYSIFLASLFKEKRIEEAIKVFDYMKACKQLNSESFSVMIRGLCHEKELRKAMK 128
LD Y + L LFK +R EEA+K+FDYM+ L+S SFS+MIRGLC E+E RKAM+
Sbjct: 500 VALDVETYGLLLDRLFKSRRHEEALKIFDYMRTHDMLSSGSFSIMIRGLCQEEEFRKAMR 559
Query: 127 LHDEMLELGLKPDQRTYKRL 68
LHD+ML+LG KPD++ YKRL
Sbjct: 560 LHDDMLKLGFKPDKKAYKRL 579
>ref|XP_006285106.1| hypothetical protein CARUB_v10006439mg [Capsella rubella]
gi|482553811|gb|EOA18004.1| hypothetical protein
CARUB_v10006439mg [Capsella rubella]
Length = 585
Score = 145 bits (365), Expect = 7e-33
Identities = 66/137 (48%), Positives = 98/137 (71%), Gaps = 2/137 (1%)
Frame = -1
Query: 472 CAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGKAITLHDKLEDLKGTLDT 293
C + RWR AE+L D +M+ DS SCG ++RYC ++ KA+ LH++++ +KG+LD
Sbjct: 444 CRKRRWRHAEKLLDSVMEMEVYFDSFSCGILMERYCRSGKLDKAMELHERIKKMKGSLDV 503
Query: 292 AIYSIFLASLFKEKR--IEEAIKVFDYMKACKQLNSESFSVMIRGLCHEKELRKAMKLHD 119
Y+ L L +R +EEA++VF+YMK K +NS+SF++MI+GLCH KE++KA + HD
Sbjct: 504 NAYNAVLDRLMMRQREMVEEAVRVFEYMKEMKSVNSKSFTIMIQGLCHVKEMKKAKQSHD 563
Query: 118 EMLELGLKPDQRTYKRL 68
EML+LG+KPD TYKR+
Sbjct: 564 EMLKLGMKPDLATYKRV 580
>ref|XP_006413812.1| hypothetical protein EUTSA_v10024760mg [Eutrema salsugineum]
gi|557114982|gb|ESQ55265.1| hypothetical protein
EUTSA_v10024760mg [Eutrema salsugineum]
Length = 584
Score = 142 bits (358), Expect = 5e-32
Identities = 68/137 (49%), Positives = 95/137 (69%), Gaps = 2/137 (1%)
Frame = -1
Query: 472 CAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGKAITLHDKLEDLKGTLDT 293
C + RW AE+L D +M+ DS SCG ++RYC ++ KA+ LH+K++ +KG+LD
Sbjct: 443 CRKRRWNRAEKLLDSVMEMEVHFDSFSCGLLMERYCRSGKLEKAMVLHEKIKKMKGSLDV 502
Query: 292 AIYSIFLASLFKEKR--IEEAIKVFDYMKACKQLNSESFSVMIRGLCHEKELRKAMKLHD 119
Y+ L L +R +EEA++VF+YMK +NS+SF++MI GLC KE++KAMK HD
Sbjct: 503 NAYNAVLDRLMMRQRTMVEEAVQVFEYMKEMNTVNSKSFTIMIHGLCRVKEMKKAMKSHD 562
Query: 118 EMLELGLKPDQRTYKRL 68
EML+LGLKPD TYKRL
Sbjct: 563 EMLKLGLKPDLVTYKRL 579
>sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21170
Length = 585
Score = 140 bits (352), Expect = 2e-31
Identities = 65/137 (47%), Positives = 95/137 (69%), Gaps = 2/137 (1%)
Frame = -1
Query: 472 CAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGKAITLHDKLEDLKGTLDT 293
C + RW+ AE+L D +M+ DS +CG ++RYC ++ KA+ LH+K++ +KG+LD
Sbjct: 444 CRKRRWKSAEKLLDSVMEMEVYFDSFACGLLMERYCRSGKLEKALVLHEKIKKMKGSLDV 503
Query: 292 AIYSIFLASLFKEKR--IEEAIKVFDYMKACKQLNSESFSVMIRGLCHEKELRKAMKLHD 119
Y+ L L ++ +EEA+ VF+YMK +NS+SF++MI+GLC KE++KAM+ HD
Sbjct: 504 NAYNAVLDRLMMRQKEMVEEAVVVFEYMKEINSVNSKSFTIMIQGLCRVKEMKKAMRSHD 563
Query: 118 EMLELGLKPDQRTYKRL 68
EML LGLKPD TYKRL
Sbjct: 564 EMLRLGLKPDLVTYKRL 580
>ref|XP_006857674.1| hypothetical protein AMTR_s00061p00160470 [Amborella trichopoda]
gi|548861770|gb|ERN19141.1| hypothetical protein
AMTR_s00061p00160470 [Amborella trichopoda]
Length = 372
Score = 121 bits (303), Expect = 1e-25
Identities = 56/140 (40%), Positives = 91/140 (65%)
Frame = -1
Query: 487 YVNKQCAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGKAITLHDKLEDLK 308
+++ QC++G W+EA EL +++++G + + +CG F++ YC + A++LH+KL L
Sbjct: 228 HISSQCSKGGWQEANELLWVMLERGVMPNGFACGSFIRHYCEDGGLDYALSLHEKLVKLG 287
Query: 307 GTLDTAIYSIFLASLFKEKRIEEAIKVFDYMKACKQLNSESFSVMIRGLCHEKELRKAMK 128
L+ Y+I L L+ ++EEA ++FD+M+ +S SF MI C EK+ +A K
Sbjct: 288 NVLNAPSYNILLDQLYNGGKLEEASEMFDHMRNKNVTSSASFITMISWFCWEKKFSEARK 347
Query: 127 LHDEMLELGLKPDQRTYKRL 68
+HDEML+ GLKPD+ TYKRL
Sbjct: 348 MHDEMLKKGLKPDEATYKRL 367
>ref|XP_006826483.1| hypothetical protein AMTR_s00004p00243870 [Amborella trichopoda]
gi|548830797|gb|ERM93720.1| hypothetical protein
AMTR_s00004p00243870 [Amborella trichopoda]
Length = 359
Score = 119 bits (299), Expect = 3e-25
Identities = 57/140 (40%), Positives = 86/140 (61%)
Frame = -1
Query: 487 YVNKQCAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGKAITLHDKLEDLK 308
Y++ QC++G W+EA EL + +++G + D G F++ YC + A++LH+K
Sbjct: 215 YISAQCSKGGWQEANELLWVTLERGVMPDGFVWGSFIRHYCEDGHLDYALSLHEKFAKSG 274
Query: 307 GTLDTAIYSIFLASLFKEKRIEEAIKVFDYMKACKQLNSESFSVMIRGLCHEKELRKAMK 128
L+ Y+I L L+ E ++EEA +FDYM+ +S SF MI C EK+ +A K
Sbjct: 275 NVLNAPSYNILLNRLYNEGKLEEASGMFDYMRNKDVTSSASFMTMISWFCREKKFSEARK 334
Query: 127 LHDEMLELGLKPDQRTYKRL 68
+HDEML+ GLKPD+ TYKRL
Sbjct: 335 MHDEMLKKGLKPDEATYKRL 354
>ref|NP_193849.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332659015|gb|AEE84415.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 551
Score = 105 bits (262), Expect = 6e-21
Identities = 56/131 (42%), Positives = 86/131 (65%), Gaps = 3/131 (2%)
Frame = -1
Query: 451 EAEELFDLIMDQGCLLDSTSCGYFVKRYCSRR-EIGKAITLHDKLEDLKGTLDTAIYSIF 275
E EEL ++ +G + + ++ + R ++ KA+ LH+K++ +KG+LD Y+
Sbjct: 416 EEEELLVDVIKRGKEDGNPQRSFLIRLWKWRSGKLEKALVLHEKIKKMKGSLDVNAYNAV 475
Query: 274 LASLFKEKR--IEEAIKVFDYMKACKQLNSESFSVMIRGLCHEKELRKAMKLHDEMLELG 101
L L ++ +EEA+ VF+YMK +NS+SF++MI+GLC KE++KAM+ HDEML LG
Sbjct: 476 LDRLMMRQKEMVEEAVVVFEYMKEINSVNSKSFTIMIQGLCRVKEMKKAMRSHDEMLRLG 535
Query: 100 LKPDQRTYKRL 68
LKPD TYKRL
Sbjct: 536 LKPDLVTYKRL 546
>emb|CAA17536.1| putative protein [Arabidopsis thaliana] gi|7268914|emb|CAB79117.1|
putative protein [Arabidopsis thaliana]
Length = 534
Score = 105 bits (262), Expect = 6e-21
Identities = 56/131 (42%), Positives = 86/131 (65%), Gaps = 3/131 (2%)
Frame = -1
Query: 451 EAEELFDLIMDQGCLLDSTSCGYFVKRYCSRR-EIGKAITLHDKLEDLKGTLDTAIYSIF 275
E EEL ++ +G + + ++ + R ++ KA+ LH+K++ +KG+LD Y+
Sbjct: 399 EEEELLVDVIKRGKEDGNPQRSFLIRLWKWRSGKLEKALVLHEKIKKMKGSLDVNAYNAV 458
Query: 274 LASLFKEKR--IEEAIKVFDYMKACKQLNSESFSVMIRGLCHEKELRKAMKLHDEMLELG 101
L L ++ +EEA+ VF+YMK +NS+SF++MI+GLC KE++KAM+ HDEML LG
Sbjct: 459 LDRLMMRQKEMVEEAVVVFEYMKEINSVNSKSFTIMIQGLCRVKEMKKAMRSHDEMLRLG 518
Query: 100 LKPDQRTYKRL 68
LKPD TYKRL
Sbjct: 519 LKPDLVTYKRL 529
>ref|XP_002867861.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313697|gb|EFH44120.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 534
Score = 102 bits (254), Expect = 5e-20
Identities = 54/131 (41%), Positives = 86/131 (65%), Gaps = 3/131 (2%)
Frame = -1
Query: 451 EAEELFDLIMDQGCLLDSTSCGYFVKRYCSRR-EIGKAITLHDKLEDLKGTLDTAIYSIF 275
E EEL ++ +G + + ++ + R ++ KA+ LH+K++ +KG+LD Y+
Sbjct: 399 EGEELLVDVIKRGKEDGNPQRSFLIRLWKWRSGKLEKALELHEKIKKMKGSLDVNAYNAV 458
Query: 274 LASLFKEKR--IEEAIKVFDYMKACKQLNSESFSVMIRGLCHEKELRKAMKLHDEMLELG 101
L L ++ +EEA+ VF+YMK K +NS+SF++MI+GLC KE++KAM+ HDEML L
Sbjct: 459 LDRLMMRQKEMVEEAVGVFEYMKEMKSVNSKSFTIMIQGLCRVKEMKKAMRSHDEMLRLD 518
Query: 100 LKPDQRTYKRL 68
+KPD +YKRL
Sbjct: 519 MKPDLVSYKRL 529
>ref|XP_004296042.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Fragaria vesca subsp.
vesca]
Length = 563
Score = 84.7 bits (208), Expect = 1e-14
Identities = 43/129 (33%), Positives = 77/129 (59%), Gaps = 1/129 (0%)
Frame = -1
Query: 472 CAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGKAITLHDKLEDLKGTLDT 293
C G EA ++FDL++ +GC++D SC + YC ++I +AI L +++ L+ DT
Sbjct: 207 CLRGEMGEARKIFDLMLRKGCMVDVWSCTILINGYCKHKKIDQAIELFEEMLRLELVPDT 266
Query: 292 AIYSIFLASLFKEKRIEEAIKVFDYMKACKQL-NSESFSVMIRGLCHEKELRKAMKLHDE 116
YSI + K R++EA K+F + +C L N +++++++ GLC ++L +AM L E
Sbjct: 267 YTYSILIDGFCKAGRMQEAEKLFSRLLSCGLLPNVQTYAILLDGLCSSQQLSRAMDLLRE 326
Query: 115 MLELGLKPD 89
M + ++ D
Sbjct: 327 MEDKKMELD 335
Score = 74.3 bits (181), Expect = 2e-11
Identities = 45/134 (33%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Frame = -1
Query: 472 CAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGKAITLHDKLEDLKGTLDT 293
C GR +EAE+LF ++ G L + + + CS +++ +A+ L ++ED K LD
Sbjct: 277 CKAGRMQEAEKLFSRLLSCGLLPNVQTYAILLDGLCSSQQLSRAMDLLREMEDKKMELDI 336
Query: 292 AIYSIFLASLFKEKRIEEAIKVFDYMKA-CKQLNSESFSVMIRGLCHEKELRKAMKLHDE 116
IY++ + + K ++E A F + + Q N +++VMI GLC L +A KL E
Sbjct: 337 VIYTVIIEGMCKAGKLESATDFFSSLSSKGVQPNVRTYNVMINGLCKGGLLVEAEKLLRE 396
Query: 115 MLELGLKPDQRTYK 74
M G PD TYK
Sbjct: 397 MGAKGCSPDSCTYK 410
Score = 58.9 bits (141), Expect = 7e-07
Identities = 35/137 (25%), Positives = 74/137 (54%), Gaps = 1/137 (0%)
Frame = -1
Query: 484 VNKQCAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGKAITLHDKLEDLKG 305
V+ C EG+ EA + ++++ + ++ + + YC R E+G+A + D +
Sbjct: 168 VDGLCKEGKVVEANSVVEIMIRKDIEPNAITYSSLMDGYCLRGEMGEARKIFDLMLRKGC 227
Query: 304 TLDTAIYSIFLASLFKEKRIEEAIKVFDYMKACKQL-NSESFSVMIRGLCHEKELRKAMK 128
+D +I + K K+I++AI++F+ M + + ++ ++S++I G C +++A K
Sbjct: 228 MVDVWSCTILINGYCKHKKIDQAIELFEEMLRLELVPDTYTYSILIDGFCKAGRMQEAEK 287
Query: 127 LHDEMLELGLKPDQRTY 77
L +L GL P+ +TY
Sbjct: 288 LFSRLLSCGLLPNVQTY 304
>ref|XP_004295937.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Fragaria vesca subsp.
vesca]
Length = 709
Score = 82.8 bits (203), Expect = 4e-14
Identities = 40/121 (33%), Positives = 69/121 (57%), Gaps = 1/121 (0%)
Frame = -1
Query: 472 CAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGKAITLHDKLEDLKGTLDT 293
C G EA ++FDL++ +G ++D SC + YC +E+ KA + K+ ++ DT
Sbjct: 449 CMRGEMDEARQVFDLMIRRGSMVDVQSCSILINGYCKAKEVNKANKIFKKMRRMELVPDT 508
Query: 292 AIYSIFLASLFKEKRIEEAIKVFDYMKACKQL-NSESFSVMIRGLCHEKELRKAMKLHDE 116
Y+ + K RI+EA+++F M C L N ++++V++ GLC+ + L AM+L E
Sbjct: 509 VTYTSLIDGFCKAGRIQEAVELFSKMHGCGHLSNLQTYAVLLDGLCNNQRLTTAMELLKE 568
Query: 115 M 113
M
Sbjct: 569 M 569
Score = 57.4 bits (137), Expect = 2e-06
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 1/136 (0%)
Frame = -1
Query: 472 CAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGKAITLHDKLEDLKGTLDT 293
C G+W+EA L D ++ +G D + V C + +A ++ + T
Sbjct: 379 CNLGQWQEATRLMDQMLSKGVFPDVFTFNVLVDTLCKEGMVVEAKSVVQMMIQRNIEPVT 438
Query: 292 AIYSIFLASLFKEKRIEEAIKVFDYM-KACKQLNSESFSVMIRGLCHEKELRKAMKLHDE 116
Y+ + ++EA +VFD M + ++ +S S++I G C KE+ KA K+ +
Sbjct: 439 ITYNSLMDGYCMRGEMDEARQVFDLMIRRGSMVDVQSCSILINGYCKAKEVNKANKIFKK 498
Query: 115 MLELGLKPDQRTYKRL 68
M + L PD TY L
Sbjct: 499 MRRMELVPDTVTYTSL 514
>ref|XP_004295753.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Fragaria vesca subsp.
vesca]
Length = 690
Score = 82.4 bits (202), Expect = 6e-14
Identities = 46/134 (34%), Positives = 82/134 (61%), Gaps = 2/134 (1%)
Frame = -1
Query: 472 CAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGKAITLHDKLEDLKGTL-D 296
C G EA+++FDL++ +G +++ SC + YC +++I +A L D++ L+G + D
Sbjct: 232 CLRGEMDEAKQVFDLMVAKGSMVNVHSCNILINGYCKQKKIHEAKNLFDEM-PLRGLVPD 290
Query: 295 TAIYSIFLASLFKEKRIEEAIKVFDYMKACKQL-NSESFSVMIRGLCHEKELRKAMKLHD 119
T YS + +K R +EA K+F M+A QL ++ ++++++ GLC+ ++L KA++L
Sbjct: 291 TVTYSTLIDGFYKAGRQQEAEKLFSEMQASGQLPSNRTYNIILDGLCNNQQLSKAIELLR 350
Query: 118 EMLELGLKPDQRTY 77
EM LKPD Y
Sbjct: 351 EMEANKLKPDIVAY 364
Score = 65.1 bits (157), Expect = 9e-09
Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 1/133 (0%)
Frame = -1
Query: 463 GRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGKAITLHDKLEDLKGTLDTAIY 284
GR +EAE+LF + G L + + + C+ +++ KAI L ++E K D Y
Sbjct: 305 GRQQEAEKLFSEMQASGQLPSNRTYNIILDGLCNNQQLSKAIELLREMEANKLKPDIVAY 364
Query: 283 SIFLASLFKEKRIEEAIKVFDYMKACKQL-NSESFSVMIRGLCHEKELRKAMKLHDEMLE 107
+I + +LFK +IE A VF + + L + ++++MIRGLC+ L +A KL EM +
Sbjct: 365 NIIIEALFKAGKIESATDVFSGLSSKGVLPDVWTYNIMIRGLCNGGILVEAEKLFREMEQ 424
Query: 106 LGLKPDQRTYKRL 68
PD TY +
Sbjct: 425 KCCYPDGCTYNTI 437
Score = 60.1 bits (144), Expect = 3e-07
Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 1/136 (0%)
Frame = -1
Query: 472 CAEGRWREAEELFDLIMDQGCLLDSTSCGYFVKRYCSRREIGKAITLHDKLEDLKGTLDT 293
C GRW+EA L + + QG D + V C + +A ++ + +T
Sbjct: 162 CNIGRWKEAWRLLNEMASQGIFPDLITFNILVDGLCKEGRVVQARSVVQIMIQRGIEPNT 221
Query: 292 AIYSIFLASLFKEKRIEEAIKVFDYMKAC-KQLNSESFSVMIRGLCHEKELRKAMKLHDE 116
YS + ++EA +VFD M A +N S +++I G C +K++ +A L DE
Sbjct: 222 ITYSSLMDGHCLRGEMDEAKQVFDLMVAKGSMVNVHSCNILINGYCKQKKIHEAKNLFDE 281
Query: 115 MLELGLKPDQRTYKRL 68
M GL PD TY L
Sbjct: 282 MPLRGLVPDTVTYSTL 297