BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00031786
         (651 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFI56618.1| replication associated protein [Tomato leaf curl ...   157   3e-36
emb|CAM91890.1| replication associated protein [Bean leaf curl M...   155   1e-35
gb|AFI56599.1| replication associated protein [Tomato leaf curl ...   154   3e-35
emb|CBG23017.1| replication associated protein (Rep) [Cotton lea...   154   3e-35
gb|ABO31310.1| rep-associated protein [Tomato leaf curl Sudan vi...   154   3e-35
gb|AFM44665.1| AC1 [Premna leaf curl virus]                           152   8e-35
gb|ACY79456.1| Rep [Sweet potato leaf curl virus]                     152   1e-34
gb|ACA30267.1| replication-associated protein [Cotton leaf curl ...   152   1e-34
gb|AEI52875.1| replication initiator protein [Cotton leaf curl v...   151   1e-34
emb|CBE70766.1| replication associated protein [Cotton leaf curl...   151   1e-34
emb|CBE70760.1| replication associated protein [Cotton leaf curl...   151   1e-34
ref|NP_543117.1| replication-associated protein [Soybean crinkle...   151   2e-34
dbj|BAB33263.1| replication-associated protein [Soybean crinkle ...   151   2e-34
emb|CAM58879.1| Rep [Cotton leaf curl Rajasthan virus]                151   2e-34
gb|ABC74551.1| replication initiation protein [Rhynchosia golden...   150   2e-34
gb|AGN52713.1| Rep [Tomato leaf curl Sudan virus]                     150   3e-34
gb|AAL05299.1| replication-associated protein [Tomato leaf curl ...   150   3e-34
gb|AGN52707.1| Rep [Tomato leaf curl Sudan virus]                     150   4e-34
emb|CCI69937.1| truncated replication associated protein [Cotton...   150   4e-34
gb|AFI56626.1| replication associated protein [Tomato leaf curl ...   150   4e-34

>gb|AFI56618.1| replication associated protein [Tomato leaf curl Sudan virus]
          Length = 359

 Score =  157 bits (397), Expect = 3e-36
 Identities = 80/163 (49%), Positives = 109/163 (66%), Gaps = 1/163 (0%)
 Frame = +1

Query: 4   FLSYPQCSLSKDAALEQIKNINYPIPLKYLRVAQIKHVDGQFYLHCLLQFAGKFQTQNRK 183
           FL+YPQCSL+K+ AL Q+KNIN P   KY++V +  H +G+ +LH L+QF GKF+ QN++
Sbjct: 15  FLTYPQCSLTKEEALSQLKNINTPTNKKYIKVCRELHENGEPHLHVLIQFEGKFKCQNQR 74

Query: 184 FFDLVSPAGSTNFHPDIEGAKSRSAVKSFISEDGDFAEW-EFRSDGRNKKKSVHEKLADV 360
           FFDLVSPA S +FHP+I+GAKS S VKS+I +DGD  EW EF+ DGR+ +    +   D 
Sbjct: 75  FFDLVSPARSAHFHPNIQGAKSSSDVKSYIDKDGDTIEWGEFQIDGRSARGG-QQSANDA 133

Query: 361 YSXXXXXXXXXXXXXIIREGDPRGFVLNFDKITRNLDLIFQKP 489
           Y+             +I+E  P+ FVL F  +  NLD IFQ+P
Sbjct: 134 YAQALNTGSKSEALNVIKELAPKDFVLQFHNLNSNLDRIFQEP 176


>emb|CAM91890.1| replication associated protein [Bean leaf curl Madagascar virus]
          Length = 362

 Score =  155 bits (391), Expect = 1e-35
 Identities = 79/163 (48%), Positives = 107/163 (65%), Gaps = 1/163 (0%)
 Frame = +1

Query: 4   FLSYPQCSLSKDAALEQIKNINYPIPLKYLRVAQIKHVDGQFYLHCLLQFAGKFQTQNRK 183
           FL++P+CSLSK+ ALEQ+K +N P   KY+++ +  H DGQ +LH LLQF GKF  QN++
Sbjct: 15  FLTFPKCSLSKEEALEQLKTLNTPTNKKYIKICRELHEDGQPHLHVLLQFEGKFNCQNQR 74

Query: 184 FFDLVSPAGSTNFHPDIEGAKSRSAVKSFISEDGDFAEW-EFRSDGRNKKKSVHEKLADV 360
           FFDLVSP  S +FHP+I+GAKS S VKS+I +DGD  EW EF+ DGR+ +    +   D 
Sbjct: 75  FFDLVSPNRSAHFHPNIQGAKSSSDVKSYIDKDGDTLEWGEFQVDGRSARGG-QQTANDA 133

Query: 361 YSXXXXXXXXXXXXXIIREGDPRGFVLNFDKITRNLDLIFQKP 489
           Y+             +IRE  P+ FVL +  +  NLD IFQ+P
Sbjct: 134 YATALNSGSKQEALRVIRELAPKDFVLQYHNLVNNLDRIFQEP 176


>gb|AFI56599.1| replication associated protein [Tomato leaf curl Sudan virus]
          Length = 359

 Score =  154 bits (388), Expect = 3e-35
 Identities = 76/163 (46%), Positives = 109/163 (66%), Gaps = 1/163 (0%)
 Frame = +1

Query: 4   FLSYPQCSLSKDAALEQIKNINYPIPLKYLRVAQIKHVDGQFYLHCLLQFAGKFQTQNRK 183
           FL+YPQCSL+K+ AL Q+KNIN P   KY++V +  H +G+ +LH L+QF GKF+ QN++
Sbjct: 15  FLTYPQCSLTKEEALSQLKNINTPTNKKYIKVCRELHENGEPHLHVLIQFEGKFKCQNQR 74

Query: 184 FFDLVSPAGSTNFHPDIEGAKSRSAVKSFISEDGDFAEW-EFRSDGRNKKKSVHEKLADV 360
           FFDLVSP+ + +FHP+I+GAKS S VKS+I +DGD  +W EF+ DGR+ +    +   D 
Sbjct: 75  FFDLVSPSRAAHFHPNIQGAKSSSDVKSYIDKDGDTLDWGEFQIDGRSARGG-QQSANDA 133

Query: 361 YSXXXXXXXXXXXXXIIREGDPRGFVLNFDKITRNLDLIFQKP 489
           Y+             ++RE  PR ++L F  +  NLD IFQ+P
Sbjct: 134 YAAAINSGSKSEALRVLRELAPRDYILQFHNLNSNLDRIFQEP 176


>emb|CBG23017.1| replication associated protein (Rep) [Cotton leaf curl Gezira
           virus-[okra:BFA]]
          Length = 362

 Score =  154 bits (388), Expect = 3e-35
 Identities = 78/163 (47%), Positives = 107/163 (65%), Gaps = 1/163 (0%)
 Frame = +1

Query: 4   FLSYPQCSLSKDAALEQIKNINYPIPLKYLRVAQIKHVDGQFYLHCLLQFAGKFQTQNRK 183
           FL++P+CSLSK+ ALEQ+ N+N P   KY+++ +  H DGQ +LH LLQF GK+  QN++
Sbjct: 15  FLTFPKCSLSKEEALEQLLNLNKPTNKKYIKICRELHEDGQPHLHVLLQFEGKYNCQNKR 74

Query: 184 FFDLVSPAGSTNFHPDIEGAKSRSAVKSFISEDGDFAEW-EFRSDGRNKKKSVHEKLADV 360
           FFDLVSP  S +FHP+I+GAKS S VKS+I +DGD  EW EF+ DGR+ +    +   D 
Sbjct: 75  FFDLVSPNRSAHFHPNIQGAKSSSDVKSYIDKDGDTLEWGEFQIDGRSARGG-QQSANDA 133

Query: 361 YSXXXXXXXXXXXXXIIREGDPRGFVLNFDKITRNLDLIFQKP 489
           Y+             +IRE  P+ FVL +  +  NLD IFQ+P
Sbjct: 134 YAAALNAGSKTEALRVIRELAPKDFVLQYHNLINNLDRIFQEP 176


>gb|ABO31310.1| rep-associated protein [Tomato leaf curl Sudan virus]
           gi|385270661|gb|AFI56588.1| replication associated
           protein [Tomato leaf curl Sudan virus]
           gi|385270670|gb|AFI56596.1| replication associated
           protein [Tomato leaf curl Sudan virus]
           gi|385270682|gb|AFI56606.1| replication associated
           protein [Tomato leaf curl Sudan virus]
           gi|385270691|gb|AFI56614.1| replication associated
           protein [Tomato leaf curl Sudan virus]
          Length = 359

 Score =  154 bits (388), Expect = 3e-35
 Identities = 76/163 (46%), Positives = 109/163 (66%), Gaps = 1/163 (0%)
 Frame = +1

Query: 4   FLSYPQCSLSKDAALEQIKNINYPIPLKYLRVAQIKHVDGQFYLHCLLQFAGKFQTQNRK 183
           FL+YPQCSL+K+ AL Q+KNIN P   KY++V +  H +G+ +LH L+QF GKF+ QN++
Sbjct: 15  FLTYPQCSLTKEEALSQLKNINTPTNKKYIKVCRELHENGEPHLHVLIQFEGKFKCQNQR 74

Query: 184 FFDLVSPAGSTNFHPDIEGAKSRSAVKSFISEDGDFAEW-EFRSDGRNKKKSVHEKLADV 360
           FFDLVSP+ + +FHP+I+GAKS S VKS+I +DGD  +W EF+ DGR+ +    +   D 
Sbjct: 75  FFDLVSPSRAAHFHPNIQGAKSSSDVKSYIDKDGDTLDWGEFQIDGRSARGG-QQSANDA 133

Query: 361 YSXXXXXXXXXXXXXIIREGDPRGFVLNFDKITRNLDLIFQKP 489
           Y+             ++RE  PR ++L F  +  NLD IFQ+P
Sbjct: 134 YAAAINSGSKSEALRVLRELAPRDYILQFHNLNSNLDRIFQEP 176


>gb|AFM44665.1| AC1 [Premna leaf curl virus]
          Length = 362

 Score =  152 bits (384), Expect = 8e-35
 Identities = 76/163 (46%), Positives = 106/163 (65%), Gaps = 1/163 (0%)
 Frame = +1

Query: 4   FLSYPQCSLSKDAALEQIKNINYPIPLKYLRVAQIKHVDGQFYLHCLLQFAGKFQTQNRK 183
           FL+YPQCSL+K+ AL Q++N+N P   KY+++ +  H DG  +LH L+QF GK+Q QN +
Sbjct: 15  FLTYPQCSLTKEEALSQLQNLNTPTNKKYIKICRELHEDGSPHLHVLIQFEGKYQCQNPR 74

Query: 184 FFDLVSPAGSTNFHPDIEGAKSRSAVKSFISEDGDFAEW-EFRSDGRNKKKSVHEKLADV 360
           FFDLVSP  S ++HP+I+GAKS S VKS+I +DGD  +W EF+ DGR+ +    +   D 
Sbjct: 75  FFDLVSPTRSAHYHPNIQGAKSSSDVKSYIDKDGDTLDWGEFQIDGRSARGG-QQSANDA 133

Query: 361 YSXXXXXXXXXXXXXIIREGDPRGFVLNFDKITRNLDLIFQKP 489
           Y+             +IRE  P+ +VL F  +T NLD IFQ P
Sbjct: 134 YAQALNTGSKSEALNVIRELAPKDYVLQFHNLTANLDRIFQAP 176


>gb|ACY79456.1| Rep [Sweet potato leaf curl virus]
          Length = 365

 Score =  152 bits (383), Expect = 1e-34
 Identities = 76/163 (46%), Positives = 107/163 (65%), Gaps = 1/163 (0%)
 Frame = +1

Query: 4   FLSYPQCSLSKDAALEQIKNINYPIPLKYLRVAQIKHVDGQFYLHCLLQFAGKFQTQNRK 183
           FL+YP+CSLSK+ AL Q++N+N P+  K++++ +  H DG+ +LH LLQF GKFQ +N++
Sbjct: 16  FLTYPKCSLSKEEALTQLQNLNTPVNKKFIKICRELHEDGEPHLHVLLQFEGKFQCKNQR 75

Query: 184 FFDLVSPAGSTNFHPDIEGAKSRSAVKSFISEDGDFAEW-EFRSDGRNKKKSVHEKLADV 360
           FFDLVSP  S +FHP+I+GAKS S VKS++ +DGD  EW EF+ DGR+ +    +   D 
Sbjct: 76  FFDLVSPTRSAHFHPNIQGAKSSSDVKSYVDKDGDTIEWGEFQIDGRSARGG-QQTANDA 134

Query: 361 YSXXXXXXXXXXXXXIIREGDPRGFVLNFDKITRNLDLIFQKP 489
           Y+             +I+E  P+ FVL F  I  NLD IF  P
Sbjct: 135 YAQALNTGSKEAALNVIKELCPKDFVLQFHNINSNLDRIFSPP 177


>gb|ACA30267.1| replication-associated protein [Cotton leaf curl Gezira
           virus-[okra:Niger]] gi|218511634|gb|ACK77805.1|
           replication-associated protein [Cotton leaf curl Gezira
           virus-[okra:Niger]]
          Length = 362

 Score =  152 bits (383), Expect = 1e-34
 Identities = 77/163 (47%), Positives = 107/163 (65%), Gaps = 1/163 (0%)
 Frame = +1

Query: 4   FLSYPQCSLSKDAALEQIKNINYPIPLKYLRVAQIKHVDGQFYLHCLLQFAGKFQTQNRK 183
           FL++P+CSLSK+ ALEQ+ N+N P   KY+++ +  H DGQ +LH LLQF GK+  QN++
Sbjct: 15  FLTFPKCSLSKEEALEQLLNLNTPTNKKYIKICRELHEDGQPHLHVLLQFQGKYNCQNKR 74

Query: 184 FFDLVSPAGSTNFHPDIEGAKSRSAVKSFISEDGDFAEW-EFRSDGRNKKKSVHEKLADV 360
           FFDLVSP  S +FHP+I+GAKS S VKS+I +DGD  EW EF+ DGR+ +    +   D 
Sbjct: 75  FFDLVSPNRSAHFHPNIQGAKSSSDVKSYIDKDGDTLEWGEFQIDGRSARGG-QQTANDA 133

Query: 361 YSXXXXXXXXXXXXXIIREGDPRGFVLNFDKITRNLDLIFQKP 489
           Y+             +IRE  P+ FVL F  +  NL+ IF++P
Sbjct: 134 YAAALNAGSKAEALRVIRELAPKDFVLQFHNLNSNLERIFEEP 176


>gb|AEI52875.1| replication initiator protein [Cotton leaf curl virus]
          Length = 362

 Score =  151 bits (382), Expect = 1e-34
 Identities = 75/163 (46%), Positives = 106/163 (65%), Gaps = 1/163 (0%)
 Frame = +1

Query: 4   FLSYPQCSLSKDAALEQIKNINYPIPLKYLRVAQIKHVDGQFYLHCLLQFAGKFQTQNRK 183
           F++YP+CSL+K+ AL Q+ NI  P P KY+R+ +  H DG  +LH L+QF GKF+ QN +
Sbjct: 14  FITYPKCSLTKEEALSQLLNIQTPTPKKYIRICRELHEDGTPHLHALIQFEGKFKCQNMR 73

Query: 184 FFDLVSPAGSTNFHPDIEGAKSRSAVKSFISEDGDFAEW-EFRSDGRNKKKSVHEKLADV 360
           FFDLVSP+ S +FHP+I+GAKS S VKS+I +DGD  +W +F+ DGR+ +    +   D 
Sbjct: 74  FFDLVSPSRSAHFHPNIQGAKSSSDVKSYIEKDGDILDWGQFQIDGRSARGG-QQTANDA 132

Query: 361 YSXXXXXXXXXXXXXIIREGDPRGFVLNFDKITRNLDLIFQKP 489
           Y+             +I+E  P+ FVL F  +  NLD IFQ+P
Sbjct: 133 YAAALNAGSKSEALRVIKELAPKDFVLQFHNLNANLDRIFQEP 175


>emb|CBE70766.1| replication associated protein [Cotton leaf curl Shadadpur virus]
          Length = 362

 Score =  151 bits (382), Expect = 1e-34
 Identities = 77/163 (47%), Positives = 106/163 (65%), Gaps = 1/163 (0%)
 Frame = +1

Query: 4   FLSYPQCSLSKDAALEQIKNINYPIPLKYLRVAQIKHVDGQFYLHCLLQFAGKFQTQNRK 183
           F++YP+CSL+K+ AL Q+ NI  P   KY+R+ +  H DG  +LH L+QF GKF+ QN +
Sbjct: 14  FITYPKCSLTKEEALSQLLNIQTPTSKKYIRICRELHEDGTPHLHVLIQFEGKFKCQNMR 73

Query: 184 FFDLVSPAGSTNFHPDIEGAKSRSAVKSFISEDGDFAEW-EFRSDGRNKKKSVHEKLADV 360
           FFDLVSP+ ST+FHP+I+GAKS S VKS+I +DGD  EW EF+ DGR+ +    +   D 
Sbjct: 74  FFDLVSPSRSTHFHPNIQGAKSSSDVKSYIDKDGDTLEWGEFQIDGRSARGG-QQTANDA 132

Query: 361 YSXXXXXXXXXXXXXIIREGDPRGFVLNFDKITRNLDLIFQKP 489
           Y+             +I+E  P+ FVL F  +  NLD IFQ+P
Sbjct: 133 YAAALNAGSKSEALRVIKELAPKDFVLQFHNLNANLDRIFQEP 175


>emb|CBE70760.1| replication associated protein [Cotton leaf curl Shadadpur virus]
          Length = 362

 Score =  151 bits (382), Expect = 1e-34
 Identities = 77/163 (47%), Positives = 106/163 (65%), Gaps = 1/163 (0%)
 Frame = +1

Query: 4   FLSYPQCSLSKDAALEQIKNINYPIPLKYLRVAQIKHVDGQFYLHCLLQFAGKFQTQNRK 183
           F++YP+CSL+K+ AL Q+ NI  P   KY+R+ +  H DG  +LH L+QF GKF+ QN +
Sbjct: 14  FITYPKCSLTKEEALSQLLNIQTPTSKKYIRICRELHEDGTPHLHVLIQFEGKFKCQNMR 73

Query: 184 FFDLVSPAGSTNFHPDIEGAKSRSAVKSFISEDGDFAEW-EFRSDGRNKKKSVHEKLADV 360
           FFDLVSP+ ST+FHP+I+GAKS S VKS+I +DGD  EW EF+ DGR+ +    +   D 
Sbjct: 74  FFDLVSPSRSTHFHPNIQGAKSSSDVKSYIDKDGDTLEWGEFQIDGRSARGG-QQTANDA 132

Query: 361 YSXXXXXXXXXXXXXIIREGDPRGFVLNFDKITRNLDLIFQKP 489
           Y+             +I+E  P+ FVL F  +  NLD IFQ+P
Sbjct: 133 YAAALNAGSKSEALRVIKELAPKDFVLQFHNLNANLDRIFQEP 175


>ref|NP_543117.1| replication-associated protein [Soybean crinkle leaf virus]
           gi|18147113|dbj|BAB83043.1| replication-associated
           protein [Soybean crinkle leaf virus-[Japan]]
          Length = 361

 Score =  151 bits (381), Expect = 2e-34
 Identities = 77/163 (47%), Positives = 104/163 (63%), Gaps = 1/163 (0%)
 Frame = +1

Query: 4   FLSYPQCSLSKDAALEQIKNINYPIPLKYLRVAQIKHVDGQFYLHCLLQFAGKFQTQNRK 183
           FL+YPQCSL+K+ AL Q++NIN P   KY+++ +  H DG  +LH L+QF GK+Q +N +
Sbjct: 15  FLTYPQCSLTKEEALSQLQNINTPTNKKYIKICRELHEDGSPHLHVLVQFEGKYQCKNNR 74

Query: 184 FFDLVSPAGSTNFHPDIEGAKSRSAVKSFISEDGDFAEW-EFRSDGRNKKKSVHEKLADV 360
           FFDLVSP  S +FHP+I+GAKS S VKS+I +DGD  EW EF+ DGR+ +    +   D 
Sbjct: 75  FFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDTLEWGEFQIDGRSARGG-QQSANDA 133

Query: 361 YSXXXXXXXXXXXXXIIREGDPRGFVLNFDKITRNLDLIFQKP 489
           Y+             +IRE  P+ FVL F  +  NLD IF  P
Sbjct: 134 YAKALNSGSKSEALNVIRELAPKDFVLQFHNLNSNLDRIFTPP 176


>dbj|BAB33263.1| replication-associated protein [Soybean crinkle leaf virus]
          Length = 223

 Score =  151 bits (381), Expect = 2e-34
 Identities = 77/163 (47%), Positives = 104/163 (63%), Gaps = 1/163 (0%)
 Frame = +1

Query: 4   FLSYPQCSLSKDAALEQIKNINYPIPLKYLRVAQIKHVDGQFYLHCLLQFAGKFQTQNRK 183
           FL+YPQCSL+K+ AL Q++NIN P   KY+++ +  H DG  +LH L+QF GK+Q +N +
Sbjct: 15  FLTYPQCSLTKEEALSQLQNINTPTNKKYIKICRELHEDGSPHLHVLVQFEGKYQCKNNR 74

Query: 184 FFDLVSPAGSTNFHPDIEGAKSRSAVKSFISEDGDFAEW-EFRSDGRNKKKSVHEKLADV 360
           FFDLVSP  S +FHP+I+GAKS S VKS+I +DGD  EW EF+ DGR+ +    +   D 
Sbjct: 75  FFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDTLEWGEFQIDGRSARGG-QQSANDA 133

Query: 361 YSXXXXXXXXXXXXXIIREGDPRGFVLNFDKITRNLDLIFQKP 489
           Y+             +IRE  P+ FVL F  +  NLD IF  P
Sbjct: 134 YAKALNSGSKSEALNVIRELAPKDFVLQFHNLNSNLDRIFTPP 176


>emb|CAM58879.1| Rep [Cotton leaf curl Rajasthan virus]
          Length = 362

 Score =  151 bits (381), Expect = 2e-34
 Identities = 75/163 (46%), Positives = 106/163 (65%), Gaps = 1/163 (0%)
 Frame = +1

Query: 4   FLSYPQCSLSKDAALEQIKNINYPIPLKYLRVAQIKHVDGQFYLHCLLQFAGKFQTQNRK 183
           F++YP+CSL+K+ AL Q+ NI  P P KY+R+ +  H DG  +LH L+QF GKF+ QN +
Sbjct: 14  FITYPKCSLTKEEALSQLLNIQTPTPKKYIRICRELHEDGTPHLHVLIQFEGKFKCQNMR 73

Query: 184 FFDLVSPAGSTNFHPDIEGAKSRSAVKSFISEDGDFAEW-EFRSDGRNKKKSVHEKLADV 360
           FFDLVSP+ S +FHP+I+GAKS S VKS+I +DGD  +W +F+ DGR+ +    +   D 
Sbjct: 74  FFDLVSPSRSAHFHPNIQGAKSSSDVKSYIEKDGDILDWGQFQIDGRSARGG-QQTANDA 132

Query: 361 YSXXXXXXXXXXXXXIIREGDPRGFVLNFDKITRNLDLIFQKP 489
           Y+             +I+E  P+ FVL F  +  NLD IFQ+P
Sbjct: 133 YAAALNAGSKSEALRVIKELAPKDFVLQFHNLNANLDRIFQEP 175


>gb|ABC74551.1| replication initiation protein [Rhynchosia golden mosaic virus]
          Length = 358

 Score =  150 bits (380), Expect = 2e-34
 Identities = 76/163 (46%), Positives = 105/163 (64%), Gaps = 1/163 (0%)
 Frame = +1

Query: 4   FLSYPQCSLSKDAALEQIKNINYPIPLKYLRVAQIKHVDGQFYLHCLLQFAGKFQTQNRK 183
           FL+YPQCS+SK+ ALEQI+ ++ P+  K++++ +  H DGQ +LH L+QF GKFQ  N +
Sbjct: 15  FLTYPQCSISKEEALEQIQRLSTPVNKKFIKICRETHEDGQPHLHVLIQFEGKFQCTNNR 74

Query: 184 FFDLVSPAGSTNFHPDIEGAKSRSAVKSFISEDGDFAEW-EFRSDGRNKKKSVHEKLADV 360
           FFDLVSP  S +FHP+I+GAKS S VKS+I +DGD  EW EF+ DGR+ +    +   D 
Sbjct: 75  FFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDTIEWGEFQIDGRSARGG-QQSANDT 133

Query: 361 YSXXXXXXXXXXXXXIIREGDPRGFVLNFDKITRNLDLIFQKP 489
           Y+             II+E  P+ F L F  +  N + IFQKP
Sbjct: 134 YAKALNATSAEAALQIIKEEQPQHFFLQFHNLITNANRIFQKP 176


>gb|AGN52713.1| Rep [Tomato leaf curl Sudan virus]
          Length = 359

 Score =  150 bits (379), Expect = 3e-34
 Identities = 73/163 (44%), Positives = 109/163 (66%), Gaps = 1/163 (0%)
 Frame = +1

Query: 4   FLSYPQCSLSKDAALEQIKNINYPIPLKYLRVAQIKHVDGQFYLHCLLQFAGKFQTQNRK 183
           FL+YPQCSL+K+  L QIKN++ P   KY+++ +  H +G+ ++H L+QF GKF+ QN++
Sbjct: 15  FLTYPQCSLTKEETLSQIKNLDTPTNKKYIKICRELHENGEPHIHVLIQFEGKFKCQNQR 74

Query: 184 FFDLVSPAGSTNFHPDIEGAKSRSAVKSFISEDGDFAEW-EFRSDGRNKKKSVHEKLADV 360
           FFDLVSP+ + +FHP+I+GAKS S VKS+I +DGD  +W EF+ DGR+ +    +   D 
Sbjct: 75  FFDLVSPSRAAHFHPNIQGAKSSSDVKSYIDKDGDTIDWGEFQIDGRSARGG-QQSANDA 133

Query: 361 YSXXXXXXXXXXXXXIIREGDPRGFVLNFDKITRNLDLIFQKP 489
           Y+             II+E  P+ ++L F  +T NLD IFQ+P
Sbjct: 134 YAAALNSGSKSEALRIIKELAPKDYILQFHNLTNNLDRIFQEP 176


>gb|AAL05299.1| replication-associated protein [Tomato leaf curl Sudan virus -
           [Shambat]]
          Length = 359

 Score =  150 bits (379), Expect = 3e-34
 Identities = 73/163 (44%), Positives = 109/163 (66%), Gaps = 1/163 (0%)
 Frame = +1

Query: 4   FLSYPQCSLSKDAALEQIKNINYPIPLKYLRVAQIKHVDGQFYLHCLLQFAGKFQTQNRK 183
           FL+YPQCSL+K+  L QIKN++ P   KY+++ +  H +G+ ++H L+QF GKF+ QN++
Sbjct: 15  FLTYPQCSLTKEETLSQIKNLDTPTNKKYIKICRELHENGEPHIHVLIQFEGKFKCQNQR 74

Query: 184 FFDLVSPAGSTNFHPDIEGAKSRSAVKSFISEDGDFAEW-EFRSDGRNKKKSVHEKLADV 360
           FFDLVSP+ + +FHP+I+GAKS S VKS+I +DGD  +W EF+ DGR+ +    +   D 
Sbjct: 75  FFDLVSPSRAAHFHPNIQGAKSSSDVKSYIDKDGDTIDWGEFQIDGRSARGG-QQSANDA 133

Query: 361 YSXXXXXXXXXXXXXIIREGDPRGFVLNFDKITRNLDLIFQKP 489
           Y+             II+E  P+ ++L F  +T NLD IFQ+P
Sbjct: 134 YAAALNSGSKSEALRIIKELAPKDYILQFHNLTNNLDRIFQEP 176


>gb|AGN52707.1| Rep [Tomato leaf curl Sudan virus]
          Length = 359

 Score =  150 bits (378), Expect = 4e-34
 Identities = 73/163 (44%), Positives = 109/163 (66%), Gaps = 1/163 (0%)
 Frame = +1

Query: 4   FLSYPQCSLSKDAALEQIKNINYPIPLKYLRVAQIKHVDGQFYLHCLLQFAGKFQTQNRK 183
           FL+YPQCSL+K+  L QIKN++ P   KY+++ +  H +G+ ++H L+QF GKF+ QN++
Sbjct: 15  FLTYPQCSLTKEETLSQIKNLDTPTNKKYIKICREIHENGEPHIHVLIQFEGKFKCQNQR 74

Query: 184 FFDLVSPAGSTNFHPDIEGAKSRSAVKSFISEDGDFAEW-EFRSDGRNKKKSVHEKLADV 360
           FFDLVSP+ + +FHP+I+GAKS S VKS+I +DGD  +W EF+ DGR+ +    +   D 
Sbjct: 75  FFDLVSPSRAAHFHPNIQGAKSSSDVKSYIDKDGDTIDWGEFQIDGRSARGG-QQSANDA 133

Query: 361 YSXXXXXXXXXXXXXIIREGDPRGFVLNFDKITRNLDLIFQKP 489
           Y+             II+E  P+ ++L F  +T NLD IFQ+P
Sbjct: 134 YAAALNSGSKSEALRIIKELAPKDYILQFHNLTNNLDRIFQEP 176


>emb|CCI69937.1| truncated replication associated protein [Cotton leaf curl
           Shadadpur virus]
          Length = 362

 Score =  150 bits (378), Expect = 4e-34
 Identities = 75/163 (46%), Positives = 106/163 (65%), Gaps = 1/163 (0%)
 Frame = +1

Query: 4   FLSYPQCSLSKDAALEQIKNINYPIPLKYLRVAQIKHVDGQFYLHCLLQFAGKFQTQNRK 183
           F++YP+CSL+K+ AL Q+ NI  P   KY+R+ +  H DG  +LH L+QF GKF+ QN +
Sbjct: 14  FITYPKCSLTKEEALSQLLNIQTPTSKKYIRICRELHEDGTPHLHVLIQFEGKFKCQNMR 73

Query: 184 FFDLVSPAGSTNFHPDIEGAKSRSAVKSFISEDGDFAEW-EFRSDGRNKKKSVHEKLADV 360
           FFDLVSP+ ST+FHP+I+GAKS S VKS+I +DGD  +W +F+ DGR+ +    +   D 
Sbjct: 74  FFDLVSPSRSTHFHPNIQGAKSSSDVKSYIEKDGDILDWGQFQIDGRSARGG-QQTANDA 132

Query: 361 YSXXXXXXXXXXXXXIIREGDPRGFVLNFDKITRNLDLIFQKP 489
           Y+             +I+E  P+ FVL F  +  NLD IFQ+P
Sbjct: 133 YAAALNAGSKSEALRVIKELAPKDFVLQFHNLNANLDRIFQEP 175


>gb|AFI56626.1| replication associated protein [Tomato leaf curl Sudan virus]
          Length = 359

 Score =  150 bits (378), Expect = 4e-34
 Identities = 76/163 (46%), Positives = 107/163 (65%), Gaps = 1/163 (0%)
 Frame = +1

Query: 4   FLSYPQCSLSKDAALEQIKNINYPIPLKYLRVAQIKHVDGQFYLHCLLQFAGKFQTQNRK 183
           FL+YPQCSL+K+ AL Q+KNIN P   KY++V +  H +G+ +LH L+QF GKF+ QN++
Sbjct: 15  FLTYPQCSLTKEEALSQLKNINTPTNKKYIKVCRELHENGEPHLHVLIQFEGKFKCQNQR 74

Query: 184 FFDLVSPAGSTNFHPDIEGAKSRSAVKSFISEDGDFAEW-EFRSDGRNKKKSVHEKLADV 360
           FFDLVSP+ + +FHP+I+GAKS S VKS+I +DGD  EW EF+ DGR+ +    +   D 
Sbjct: 75  FFDLVSPSRAAHFHPNIQGAKSSSDVKSYIDKDGDTLEWGEFQIDGRSARGG-QQTANDA 133

Query: 361 YSXXXXXXXXXXXXXIIREGDPRGFVLNFDKITRNLDLIFQKP 489
            +             IIRE  P+ F+  +  +  NLD IFQ+P
Sbjct: 134 AAEALNTGSASAALQIIREKLPKDFIFQYHNLNNNLDRIFQEP 176