BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00031411
         (397 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520160.1| pentatricopeptide repeat-containing protein,...   164   1e-38
ref|XP_006438554.1| hypothetical protein CICLE_v10033899mg [Citr...   161   9e-38
gb|EOY00226.1| Tetratricopeptide repeat (TPR)-like superfamily p...   160   2e-37
ref|XP_006483265.1| PREDICTED: pentatricopeptide repeat-containi...   160   2e-37
gb|EXB63793.1| hypothetical protein L484_021064 [Morus notabilis]     158   6e-37
ref|XP_006357243.1| PREDICTED: pentatricopeptide repeat-containi...   155   7e-36
ref|XP_006357242.1| PREDICTED: pentatricopeptide repeat-containi...   155   7e-36
ref|XP_004238748.1| PREDICTED: pentatricopeptide repeat-containi...   155   7e-36
emb|CBI32034.3| unnamed protein product [Vitis vinifera]              149   3e-34
ref|XP_002269101.1| PREDICTED: pentatricopeptide repeat-containi...   149   3e-34
gb|EMJ28385.1| hypothetical protein PRUPE_ppa019632mg [Prunus pe...   149   4e-34
ref|XP_002325053.2| hypothetical protein POPTR_0018s10010g [Popu...   149   5e-34
ref|XP_002886666.1| hypothetical protein ARALYDRAFT_475343 [Arab...   149   5e-34
emb|CAN62088.1| hypothetical protein VITISV_030648 [Vitis vinifera]   149   5e-34
ref|XP_006301723.1| hypothetical protein CARUB_v10022184mg [Caps...   147   2e-33
gb|AAF79766.1|AC009317_25 T30E16.32 [Arabidopsis thaliana]            147   2e-33
ref|NP_176180.1| pentatricopeptide repeat-containing protein CRR...   147   2e-33
dbj|BAF00484.1| hypothetical protein [Arabidopsis thaliana]           147   2e-33
gb|AAD39314.1|AC007258_3 Hypothetical protein [Arabidopsis thali...   147   2e-33
ref|XP_004135466.1| PREDICTED: pentatricopeptide repeat-containi...   140   2e-31

>ref|XP_002520160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540652|gb|EEF42215.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 330

 Score =  164 bits (414), Expect = 1e-38
 Identities = 77/115 (66%), Positives = 96/115 (83%)
 Frame = +1

Query: 52  DLMYTLQLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQELLKQESLLPDKHTFPFV 231
           DL Y  +LF++   PN F++NTLIRA A S D K+Q+FLL++ +++Q ++LPDKHT+PFV
Sbjct: 78  DLDYAYRLFSKFDNPNAFMWNTLIRACARSYDRKEQSFLLYKRMIEQGAVLPDKHTYPFV 137

Query: 232 LKACAYLFALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYASCGHSEIARKVFDKM 396
           LKACAYLFAL+EGKQ HA +LKHGF SDVY+NNSLIHFYASCG SE A+ VFDKM
Sbjct: 138 LKACAYLFALNEGKQVHAQMLKHGFESDVYINNSLIHFYASCGCSEPAQYVFDKM 192



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 40/111 (36%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
 Frame = +1

Query: 73  LFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQELLKQESLLPDKHTFPFVLKACAYL 252
           +F+++P  +   +N +I A     +    A  LF +L  QE   PD +T   VL ACA L
Sbjct: 188 VFDKMPARSLVSWNAMIDALVQFGEFDA-ALKLFVQL--QELFEPDGYTMQSVLNACAGL 244

Query: 253 FALSEGKQTHAHVLKH---GFGSDVYVNNSLIHFYASCGHSEIARKVFDKM 396
            ALS G   HA++L+        DV V+N L+  Y  CG  +IA +VF++M
Sbjct: 245 CALSLGMWVHAYMLRKFDVEVTLDVLVDNCLLDMYCKCGSLDIAMQVFERM 295


>ref|XP_006438554.1| hypothetical protein CICLE_v10033899mg [Citrus clementina]
           gi|557540750|gb|ESR51794.1| hypothetical protein
           CICLE_v10033899mg [Citrus clementina]
          Length = 597

 Score =  161 bits (407), Expect = 9e-38
 Identities = 74/115 (64%), Positives = 90/115 (78%)
 Frame = +1

Query: 52  DLMYTLQLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQELLKQESLLPDKHTFPFV 231
           DL Y  ++F QI  PN+F +NTLIRA A S D K QA +LFQ +++Q ++LPDKHTFPF 
Sbjct: 65  DLDYAFRVFYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFA 124

Query: 232 LKACAYLFALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYASCGHSEIARKVFDKM 396
           LKACAYLFA S+GKQ HAH+ K G  SDVY+NNSLIHFYA+CGH ++A KVFD M
Sbjct: 125 LKACAYLFAFSQGKQAHAHIFKRGLASDVYINNSLIHFYATCGHLDLANKVFDNM 179



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 39/99 (39%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
 Frame = +1

Query: 109 YNTLIRAYAHSKDHKKQAFLLFQELLKQESLLPDKHTFPFVLKACAYLFALSEGKQTHAH 288
           +N +I A+    +    A  LF+ +  Q    PD +TF  +  ACA L  LS G   HA+
Sbjct: 187 WNVMIDAFVQFGEFDS-ALKLFRRM--QILFEPDGYTFQSITSACAGLATLSLGTWAHAY 243

Query: 289 VLKH---GFGSDVYVNNSLIHFYASCGHSEIARKVFDKM 396
           +L+H      +DV VNNSLI  Y  CG  +IAR+VF+ M
Sbjct: 244 ILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESM 282


>gb|EOY00226.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao]
          Length = 611

 Score =  160 bits (405), Expect = 2e-37
 Identities = 77/115 (66%), Positives = 91/115 (79%)
 Frame = +1

Query: 52  DLMYTLQLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQELLKQESLLPDKHTFPFV 231
           D  Y L LFNQ+  PN+F++NTLIRA A + ++K+QA  L+QE+L+Q  + PDKHTFPFV
Sbjct: 79  DFNYALLLFNQVENPNSFMWNTLIRACALNVNNKEQAIRLYQEMLEQALVFPDKHTFPFV 138

Query: 232 LKACAYLFALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYASCGHSEIARKVFDKM 396
           LK CAYLFA SEGKQ HAH LKH FGSDVYVNNSLIH YASCG  ++A KVF KM
Sbjct: 139 LKGCAYLFAFSEGKQVHAHALKHRFGSDVYVNNSLIHLYASCGCLDLAEKVFVKM 193



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 39/99 (39%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
 Frame = +1

Query: 109 YNTLIRAYAHSKDHKKQAFLLFQELLKQESLLPDKHTFPFVLKACAYLFALSEGKQTHAH 288
           +N LI  +A        A  LF+E+  Q    PD +T   V+ ACA L ALS G   HA+
Sbjct: 201 WNVLIEGFAQFGKFNT-ALELFREM--QNRFDPDGYTLQSVISACAGLGALSLGAWAHAY 257

Query: 289 VLKH---GFGSDVYVNNSLIHFYASCGHSEIARKVFDKM 396
           +L        SDV +NNSL+  Y  CG  E+A++VF++M
Sbjct: 258 LLNKCDFDLCSDVLINNSLVDMYCKCGSLELAQQVFERM 296


>ref|XP_006483265.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
           mitochondrial-like [Citrus sinensis]
          Length = 614

 Score =  160 bits (404), Expect = 2e-37
 Identities = 74/115 (64%), Positives = 90/115 (78%)
 Frame = +1

Query: 52  DLMYTLQLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQELLKQESLLPDKHTFPFV 231
           DL Y  ++F QI  PN+F +NTLIRA A S D K QA +LFQ +++Q ++LPDKHTFPF 
Sbjct: 82  DLDYAFRVFYQIENPNSFTWNTLIRACARSVDAKPQAIVLFQRMIEQGNVLPDKHTFPFA 141

Query: 232 LKACAYLFALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYASCGHSEIARKVFDKM 396
           LKACAYLFA S+GKQ HAH+ K G  SDVY+NNSLIHFYA+CGH ++A KVFD M
Sbjct: 142 LKACAYLFAFSQGKQAHAHIFKRGLVSDVYINNSLIHFYATCGHLDLANKVFDNM 196



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 39/99 (39%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
 Frame = +1

Query: 109 YNTLIRAYAHSKDHKKQAFLLFQELLKQESLLPDKHTFPFVLKACAYLFALSEGKQTHAH 288
           +N +I A+    +    A  LF+ +  Q    PD +TF  +  ACA L  LS G   HA+
Sbjct: 204 WNVMIDAFVQFGEFDS-ALKLFRRM--QILFEPDGYTFQSITSACAGLATLSLGTWAHAY 260

Query: 289 VLKH---GFGSDVYVNNSLIHFYASCGHSEIARKVFDKM 396
           +L+H      +DV VNNSLI  Y  CG  +IAR+VF+ M
Sbjct: 261 ILRHCDHSLVTDVLVNNSLIDMYCKCGSLDIARQVFESM 299


>gb|EXB63793.1| hypothetical protein L484_021064 [Morus notabilis]
          Length = 611

 Score =  158 bits (400), Expect = 6e-37
 Identities = 75/115 (65%), Positives = 95/115 (82%)
 Frame = +1

Query: 52  DLMYTLQLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQELLKQESLLPDKHTFPFV 231
           D  Y  ++F+QI  PN+F++NTLIRA A S D K+QA +L+  +L++  +LPDK+TFPFV
Sbjct: 78  DADYAFRVFDQIETPNSFMWNTLIRACARSDDRKEQAIVLYCRMLEEGIVLPDKYTFPFV 137

Query: 232 LKACAYLFALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYASCGHSEIARKVFDKM 396
           L+ACAYLF LSEG+QTHAHVLK GF SDVY+ NSLIHFYASCGH ++A+KVFDKM
Sbjct: 138 LRACAYLFDLSEGEQTHAHVLKLGFCSDVYICNSLIHFYASCGHLDLAQKVFDKM 192



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 37/112 (33%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
 Frame = +1

Query: 70  QLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQELLKQESLLPDKHTFPFVLKACAY 249
           ++F+++P  +   +N +I A+    + +  A  LF E+  Q    PD +T   ++ ACA 
Sbjct: 187 KVFDKMPERSLVSWNAMIDAFVQFGEFET-ALKLFSEM--QNVFKPDGYTLQSIINACAG 243

Query: 250 LFALSEGKQTHAHVLKH---GFGSDVYVNNSLIHFYASCGHSEIARKVFDKM 396
           L  L+ G   HA++L+       SDV V +SL+  Y  CG  E+AR+VF++M
Sbjct: 244 LGGLALGMWAHAYILRMLDTAVASDVLVCSSLMDMYCKCGCLELARQVFERM 295


>ref|XP_006357243.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
           mitochondrial-like isoform X2 [Solanum tuberosum]
          Length = 587

 Score =  155 bits (391), Expect = 7e-36
 Identities = 79/132 (59%), Positives = 94/132 (71%)
 Frame = +1

Query: 1   PEAVXXXXXXXXXXXXQDLMYTLQLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQE 180
           P+A+             DL Y+ +LF  +  PN+FI+NTLIR  AHS D K +AFLLFQ 
Sbjct: 56  PDALFLYSRILHFASMNDLDYSFKLFGNLENPNSFIWNTLIRGCAHSNDRKGEAFLLFQR 115

Query: 181 LLKQESLLPDKHTFPFVLKACAYLFALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYASCG 360
           ++K  S+ PDKHTFPFVLK CAYLFALSEGKQ H   +K GF SDVYVNNSLIHFY+SCG
Sbjct: 116 MVK--SVEPDKHTFPFVLKGCAYLFALSEGKQAHGVAVKLGFDSDVYVNNSLIHFYSSCG 173

Query: 361 HSEIARKVFDKM 396
             + ARKVFD+M
Sbjct: 174 CLKDARKVFDEM 185



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 40/112 (35%), Positives = 64/112 (57%), Gaps = 3/112 (2%)
 Frame = +1

Query: 70  QLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQELLKQESLLPDKHTFPFVLKACAY 249
           ++F+++P  +   +N +I A   S + +  A  +F E+  Q+   PD +T   VL ACA 
Sbjct: 180 KVFDEMPERSLVSWNVMIDALVQSGEFEN-ALRMFSEM--QKVFEPDGYTMQSVLDACAG 236

Query: 250 LFALSEGKQTHAHVLKHGFGS---DVYVNNSLIHFYASCGHSEIARKVFDKM 396
           L ALS G   HA++L+    S   D+ VNN L++ Y  CG  +IA +VF++M
Sbjct: 237 LGALSLGIWAHAYILRKCESSVDFDLLVNNCLLNMYCKCGSVDIAVQVFERM 288


>ref|XP_006357242.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
           mitochondrial-like isoform X1 [Solanum tuberosum]
          Length = 602

 Score =  155 bits (391), Expect = 7e-36
 Identities = 79/132 (59%), Positives = 94/132 (71%)
 Frame = +1

Query: 1   PEAVXXXXXXXXXXXXQDLMYTLQLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQE 180
           P+A+             DL Y+ +LF  +  PN+FI+NTLIR  AHS D K +AFLLFQ 
Sbjct: 56  PDALFLYSRILHFASMNDLDYSFKLFGNLENPNSFIWNTLIRGCAHSNDRKGEAFLLFQR 115

Query: 181 LLKQESLLPDKHTFPFVLKACAYLFALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYASCG 360
           ++K  S+ PDKHTFPFVLK CAYLFALSEGKQ H   +K GF SDVYVNNSLIHFY+SCG
Sbjct: 116 MVK--SVEPDKHTFPFVLKGCAYLFALSEGKQAHGVAVKLGFDSDVYVNNSLIHFYSSCG 173

Query: 361 HSEIARKVFDKM 396
             + ARKVFD+M
Sbjct: 174 CLKDARKVFDEM 185



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 40/112 (35%), Positives = 64/112 (57%), Gaps = 3/112 (2%)
 Frame = +1

Query: 70  QLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQELLKQESLLPDKHTFPFVLKACAY 249
           ++F+++P  +   +N +I A   S + +  A  +F E+  Q+   PD +T   VL ACA 
Sbjct: 180 KVFDEMPERSLVSWNVMIDALVQSGEFEN-ALRMFSEM--QKVFEPDGYTMQSVLDACAG 236

Query: 250 LFALSEGKQTHAHVLKHGFGS---DVYVNNSLIHFYASCGHSEIARKVFDKM 396
           L ALS G   HA++L+    S   D+ VNN L++ Y  CG  +IA +VF++M
Sbjct: 237 LGALSLGIWAHAYILRKCESSVDFDLLVNNCLLNMYCKCGSVDIAVQVFERM 288


>ref|XP_004238748.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
           mitochondrial-like [Solanum lycopersicum]
          Length = 602

 Score =  155 bits (391), Expect = 7e-36
 Identities = 78/132 (59%), Positives = 94/132 (71%)
 Frame = +1

Query: 1   PEAVXXXXXXXXXXXXQDLMYTLQLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQE 180
           P+A+             DL Y+ +LF  +  PN+FI+NTLIR  AHS D K +AF+LFQ 
Sbjct: 56  PDALFLYSRILHFASMNDLDYSFKLFGNLENPNSFIWNTLIRGCAHSNDRKGEAFMLFQR 115

Query: 181 LLKQESLLPDKHTFPFVLKACAYLFALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYASCG 360
           ++  ES+ PDKHTFPFVLK CAYLFALSEGKQ H   LK GF SDVYVNNSL+HFY+SCG
Sbjct: 116 MV--ESVEPDKHTFPFVLKGCAYLFALSEGKQAHGVALKLGFDSDVYVNNSLVHFYSSCG 173

Query: 361 HSEIARKVFDKM 396
             + ARKVFD+M
Sbjct: 174 CLKDARKVFDEM 185



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
 Frame = +1

Query: 70  QLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQELLKQESLLPDKHTFPFVLKACAY 249
           ++F+++P  +   +N +I A   S + +  A  +F E+  Q+   PD +T   VL ACA 
Sbjct: 180 KVFDEMPERSLVSWNVMIDALVQSGEFEN-ALRMFSEM--QKVFEPDGYTMQSVLDACAG 236

Query: 250 LFALSEGKQTHAHVLK---HGFGSDVYVNNSLIHFYASCGHSEIARKVFDKM 396
           L ALS G   HA++L+        ++ VNN L++ Y  CG  +IA +VF++M
Sbjct: 237 LGALSLGMWCHAYILRKCESFLDFELLVNNCLLNMYCKCGSVDIAVQVFERM 288


>emb|CBI32034.3| unnamed protein product [Vitis vinifera]
          Length = 593

 Score =  149 bits (377), Expect = 3e-34
 Identities = 69/115 (60%), Positives = 89/115 (77%)
 Frame = +1

Query: 52  DLMYTLQLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQELLKQESLLPDKHTFPFV 231
           DL Y  ++F+QI  PN+F++N LIRA A S D K+ A  L+  +L+Q S++ DKHTFPFV
Sbjct: 75  DLRYAFRVFHQIENPNSFMWNALIRACARSTDRKQHAIALYHRMLEQGSVMQDKHTFPFV 134

Query: 232 LKACAYLFALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYASCGHSEIARKVFDKM 396
           LKACAYLFALSEG+Q HA +LK GF SDVY+NNSL+HFYA+C   + A+ VFD+M
Sbjct: 135 LKACAYLFALSEGEQIHAQILKLGFDSDVYINNSLVHFYATCDRLDFAKGVFDRM 189


>ref|XP_002269101.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
           mitochondrial-like [Vitis vinifera]
          Length = 607

 Score =  149 bits (377), Expect = 3e-34
 Identities = 69/115 (60%), Positives = 89/115 (77%)
 Frame = +1

Query: 52  DLMYTLQLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQELLKQESLLPDKHTFPFV 231
           DL Y  ++F+QI  PN+F++N LIRA A S D K+ A  L+  +L+Q S++ DKHTFPFV
Sbjct: 75  DLRYAFRVFHQIENPNSFMWNALIRACARSTDRKQHAIALYHRMLEQGSVMQDKHTFPFV 134

Query: 232 LKACAYLFALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYASCGHSEIARKVFDKM 396
           LKACAYLFALSEG+Q HA +LK GF SDVY+NNSL+HFYA+C   + A+ VFD+M
Sbjct: 135 LKACAYLFALSEGEQIHAQILKLGFDSDVYINNSLVHFYATCDRLDFAKGVFDRM 189


>gb|EMJ28385.1| hypothetical protein PRUPE_ppa019632mg [Prunus persica]
          Length = 579

 Score =  149 bits (376), Expect = 4e-34
 Identities = 69/115 (60%), Positives = 90/115 (78%)
 Frame = +1

Query: 52  DLMYTLQLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQELLKQESLLPDKHTFPFV 231
           D+ Y  ++FNQI  PN+F++NTL+RA A S   ++QA LL+  +L     +PD++TFPFV
Sbjct: 79  DINYAFRVFNQIENPNSFMWNTLLRACARSSQREEQAMLLYCRMLADGVAMPDQYTFPFV 138

Query: 232 LKACAYLFALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYASCGHSEIARKVFDKM 396
           L+ACAYLFALSEGKQ HA+ +K GF SDVY+NNSLIH YASCG  E+A+KVF+KM
Sbjct: 139 LRACAYLFALSEGKQAHANAVKLGFDSDVYINNSLIHLYASCGRLELAKKVFEKM 193



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 39/112 (34%), Positives = 64/112 (57%), Gaps = 3/112 (2%)
 Frame = +1

Query: 70  QLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQELLKQESLLPDKHTFPFVLKACAY 249
           ++F ++   +   +N +I ++  + + +  A  LF E+  Q+   PD +T   ++ ACA 
Sbjct: 188 KVFEKMRERSVVSWNVMIDSFVRAGEFET-ALKLFGEM--QKMFEPDGYTMQSIINACAG 244

Query: 250 LFALSEGKQTHAHVLKH---GFGSDVYVNNSLIHFYASCGHSEIARKVFDKM 396
           L AL  G   HA+VL+    G  +DV +N+SLI  Y  CG  EIA++VFD+M
Sbjct: 245 LGALYFGMWAHAYVLRKCDGGLANDVLINSSLIDMYFKCGSLEIAQQVFDRM 296


>ref|XP_002325053.2| hypothetical protein POPTR_0018s10010g [Populus trichocarpa]
           gi|550318436|gb|EEF03618.2| hypothetical protein
           POPTR_0018s10010g [Populus trichocarpa]
          Length = 595

 Score =  149 bits (375), Expect = 5e-34
 Identities = 73/117 (62%), Positives = 90/117 (76%), Gaps = 2/117 (1%)
 Frame = +1

Query: 52  DLMYTLQLFNQIPFPNTFIYNTLIRAYAHSKDH--KKQAFLLFQELLKQESLLPDKHTFP 225
           DL Y  ++F+Q+  PN+F++N LIRA A S+    K++A LL+  +L++ S  PD HTFP
Sbjct: 59  DLNYAYRVFDQVDNPNSFMWNILIRACAQSQSVHLKREAILLYNTMLQRSSPFPDNHTFP 118

Query: 226 FVLKACAYLFALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYASCGHSEIARKVFDKM 396
           FVLKACAYLFAL EGKQ HAH+LK GF SDVY+NNSLIHFYASCG  E A+ VFDKM
Sbjct: 119 FVLKACAYLFALFEGKQAHAHLLKLGFQSDVYINNSLIHFYASCGSLESAKNVFDKM 175



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 39/114 (34%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
 Frame = +1

Query: 73  LFNQIPFPNTFIYNTLIRAYAHSKDHKK--QAFLLFQELLKQESLLPDKHTFPFVLKACA 246
           +F+++P  +   +N +I A+    + +   Q F+ FQ    Q+   PD +T   V+ ACA
Sbjct: 171 VFDKMPQRSLVSWNAMIDAFVLFGEFETALQLFVQFQ----QQFFEPDGYTIQSVINACA 226

Query: 247 YLFALSEGKQTHAHVLKHGFGS----DVYVNNSLIHFYASCGHSEIARKVFDKM 396
            L ALS G   HA +L++   S     V VNNSL+  Y  CG  +IA ++F+ M
Sbjct: 227 GLCALSLGMWAHAFLLRNCGVSVARDHVLVNNSLLDMYCKCGSLDIATQIFEGM 280


>ref|XP_002886666.1| hypothetical protein ARALYDRAFT_475343 [Arabidopsis lyrata subsp.
           lyrata] gi|297332507|gb|EFH62925.1| hypothetical protein
           ARALYDRAFT_475343 [Arabidopsis lyrata subsp. lyrata]
          Length = 608

 Score =  149 bits (375), Expect = 5e-34
 Identities = 66/115 (57%), Positives = 89/115 (77%)
 Frame = +1

Query: 52  DLMYTLQLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQELLKQESLLPDKHTFPFV 231
           D+ Y  ++F+ I   ++F++NTLIRA AH    K++AF+L++++L++    PDKHTFPFV
Sbjct: 79  DVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESAPDKHTFPFV 138

Query: 232 LKACAYLFALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYASCGHSEIARKVFDKM 396
           LKACAY+F LSEGKQ H  ++KHGF  DVYVNN LIHFY SCG  ++ARKVFD+M
Sbjct: 139 LKACAYIFGLSEGKQVHCQIVKHGFSGDVYVNNGLIHFYGSCGCLDLARKVFDEM 193



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 3/112 (2%)
 Frame = +1

Query: 70  QLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQELLKQESLLPDKHTFPFVLKACAY 249
           ++F+++P  +   +N++I A     ++   A  LF+++  Q+S  PD +T   VL ACA 
Sbjct: 188 KVFDEMPERSLVSWNSMIDALVRVGEYDS-ALQLFRDM--QKSFEPDGYTMQSVLSACAG 244

Query: 250 LFALSEGKQTHAHVLKH---GFGSDVYVNNSLIHFYASCGHSEIARKVFDKM 396
           L +LS G  +H  +L++       DV + NSLI  Y  CG   +A +VF  M
Sbjct: 245 LGSLSLGTWSHVFLLRNCDVDVAMDVLIKNSLIEMYCKCGSLRMAEQVFQGM 296


>emb|CAN62088.1| hypothetical protein VITISV_030648 [Vitis vinifera]
          Length = 583

 Score =  149 bits (375), Expect = 5e-34
 Identities = 68/115 (59%), Positives = 89/115 (77%)
 Frame = +1

Query: 52  DLMYTLQLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQELLKQESLLPDKHTFPFV 231
           DL Y  ++F+QI  PN+F++N LIRA A S D K+ A  L+  +L+Q S++ DKHTFPFV
Sbjct: 75  DLRYAFRVFHQIENPNSFMWNALIRACARSTDRKQHAIALYHRMLEQGSVMQDKHTFPFV 134

Query: 232 LKACAYLFALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYASCGHSEIARKVFDKM 396
           LKACAYLFALSEG+Q HA +LK GF S+VY+NNSL+HFYA+C   + A+ VFD+M
Sbjct: 135 LKACAYLFALSEGEQIHAQILKLGFDSBVYINNSLVHFYATCDRLDFAKGVFDRM 189


>ref|XP_006301723.1| hypothetical protein CARUB_v10022184mg [Capsella rubella]
           gi|482570433|gb|EOA34621.1| hypothetical protein
           CARUB_v10022184mg [Capsella rubella]
          Length = 619

 Score =  147 bits (370), Expect = 2e-33
 Identities = 67/115 (58%), Positives = 88/115 (76%)
 Frame = +1

Query: 52  DLMYTLQLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQELLKQESLLPDKHTFPFV 231
           ++ Y  ++F+ I   ++F++NTLIRA AH    K++AFLL+ ++L++   +PDKHTFPFV
Sbjct: 79  EVNYAFRVFDSIQNRSSFMWNTLIRACAHDVSRKEEAFLLYGKMLERGESVPDKHTFPFV 138

Query: 232 LKACAYLFALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYASCGHSEIARKVFDKM 396
           LKACAY+F LSEGKQ H  VLKHGF  DVYVNN LIH Y SCG  ++ARKVFD+M
Sbjct: 139 LKACAYIFGLSEGKQVHCQVLKHGFSGDVYVNNGLIHLYGSCGCLDLARKVFDEM 193



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 37/112 (33%), Positives = 60/112 (53%), Gaps = 3/112 (2%)
 Frame = +1

Query: 70  QLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQELLKQESLLPDKHTFPFVLKACAY 249
           ++F+++P  +   +N++I A     +    A  LF+++  Q+S  PD +T   +L ACA 
Sbjct: 188 KVFDEMPERSLVSWNSMIDALVRVGEFDS-ALQLFRKM--QKSFEPDGYTMQSILSACAG 244

Query: 250 LFALSEGKQTHAHVLKH---GFGSDVYVNNSLIHFYASCGHSEIARKVFDKM 396
           L +LS G   HA +L+        DV + NSLI  Y  CG  ++A +VF  M
Sbjct: 245 LGSLSLGTWAHAFLLRKCDVDVAMDVLIKNSLIEMYYKCGSLKMAEQVFQGM 296


>gb|AAF79766.1|AC009317_25 T30E16.32 [Arabidopsis thaliana]
          Length = 695

 Score =  147 bits (370), Expect = 2e-33
 Identities = 65/115 (56%), Positives = 88/115 (76%)
 Frame = +1

Query: 52  DLMYTLQLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQELLKQESLLPDKHTFPFV 231
           D+ Y  ++F+ I   ++F++NTLIRA AH    K++AF+L++++L++    PDKHTFPFV
Sbjct: 155 DVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFV 214

Query: 232 LKACAYLFALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYASCGHSEIARKVFDKM 396
           LKACAY+F  SEGKQ H  ++KHGFG DVYVNN LIH Y SCG  ++ARKVFD+M
Sbjct: 215 LKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEM 269



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 40/112 (35%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
 Frame = +1

Query: 70  QLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQELLKQESLLPDKHTFPFVLKACAY 249
           ++F+++P  +   +N++I A     ++   A  LF+E+  Q S  PD +T   VL ACA 
Sbjct: 264 KVFDEMPERSLVSWNSMIDALVRFGEYDS-ALQLFREM--QRSFEPDGYTMQSVLSACAG 320

Query: 250 LFALSEGKQTHAHVLKH---GFGSDVYVNNSLIHFYASCGHSEIARKVFDKM 396
           L +LS G   HA +L+        DV V NSLI  Y  CG   +A +VF  M
Sbjct: 321 LGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGM 372


>ref|NP_176180.1| pentatricopeptide repeat-containing protein CRR28 [Arabidopsis
           thaliana] gi|193806498|sp|Q0WQW5.2|PPR85_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g59720, mitochondrial; Flags: Precursor
           gi|332195486|gb|AEE33607.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 638

 Score =  147 bits (370), Expect = 2e-33
 Identities = 65/115 (56%), Positives = 88/115 (76%)
 Frame = +1

Query: 52  DLMYTLQLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQELLKQESLLPDKHTFPFV 231
           D+ Y  ++F+ I   ++F++NTLIRA AH    K++AF+L++++L++    PDKHTFPFV
Sbjct: 98  DVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFV 157

Query: 232 LKACAYLFALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYASCGHSEIARKVFDKM 396
           LKACAY+F  SEGKQ H  ++KHGFG DVYVNN LIH Y SCG  ++ARKVFD+M
Sbjct: 158 LKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEM 212



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 40/112 (35%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
 Frame = +1

Query: 70  QLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQELLKQESLLPDKHTFPFVLKACAY 249
           ++F+++P  +   +N++I A     ++   A  LF+E+  Q S  PD +T   VL ACA 
Sbjct: 207 KVFDEMPERSLVSWNSMIDALVRFGEYDS-ALQLFREM--QRSFEPDGYTMQSVLSACAG 263

Query: 250 LFALSEGKQTHAHVLKH---GFGSDVYVNNSLIHFYASCGHSEIARKVFDKM 396
           L +LS G   HA +L+        DV V NSLI  Y  CG   +A +VF  M
Sbjct: 264 LGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGM 315


>dbj|BAF00484.1| hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score =  147 bits (370), Expect = 2e-33
 Identities = 65/115 (56%), Positives = 88/115 (76%)
 Frame = +1

Query: 52  DLMYTLQLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQELLKQESLLPDKHTFPFV 231
           D+ Y  ++F+ I   ++F++NTLIRA AH    K++AF+L++++L++    PDKHTFPFV
Sbjct: 89  DVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFV 148

Query: 232 LKACAYLFALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYASCGHSEIARKVFDKM 396
           LKACAY+F  SEGKQ H  ++KHGFG DVYVNN LIH Y SCG  ++ARKVFD+M
Sbjct: 149 LKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEM 203



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 40/112 (35%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
 Frame = +1

Query: 70  QLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQELLKQESLLPDKHTFPFVLKACAY 249
           ++F+++P  +   +N++I A     ++   A  LF+E+  Q S  PD +T   VL ACA 
Sbjct: 198 KVFDEMPERSLVSWNSMIDALVRFGEYDS-ALQLFREM--QRSFEPDGYTMQSVLSACAG 254

Query: 250 LFALSEGKQTHAHVLKH---GFGSDVYVNNSLIHFYASCGHSEIARKVFDKM 396
           L +LS G   HA +L+        DV V NSLI  Y  CG   +A +VF  M
Sbjct: 255 LGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGM 306


>gb|AAD39314.1|AC007258_3 Hypothetical protein [Arabidopsis thaliana]
          Length = 615

 Score =  147 bits (370), Expect = 2e-33
 Identities = 65/115 (56%), Positives = 88/115 (76%)
 Frame = +1

Query: 52  DLMYTLQLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQELLKQESLLPDKHTFPFV 231
           D+ Y  ++F+ I   ++F++NTLIRA AH    K++AF+L++++L++    PDKHTFPFV
Sbjct: 75  DVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFV 134

Query: 232 LKACAYLFALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYASCGHSEIARKVFDKM 396
           LKACAY+F  SEGKQ H  ++KHGFG DVYVNN LIH Y SCG  ++ARKVFD+M
Sbjct: 135 LKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEM 189



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 40/112 (35%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
 Frame = +1

Query: 70  QLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQELLKQESLLPDKHTFPFVLKACAY 249
           ++F+++P  +   +N++I A     ++   A  LF+E+  Q S  PD +T   VL ACA 
Sbjct: 184 KVFDEMPERSLVSWNSMIDALVRFGEYDS-ALQLFREM--QRSFEPDGYTMQSVLSACAG 240

Query: 250 LFALSEGKQTHAHVLKH---GFGSDVYVNNSLIHFYASCGHSEIARKVFDKM 396
           L +LS G   HA +L+        DV V NSLI  Y  CG   +A +VF  M
Sbjct: 241 LGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGM 292


>ref|XP_004135466.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  140 bits (353), Expect = 2e-31
 Identities = 68/115 (59%), Positives = 85/115 (73%)
 Frame = +1

Query: 52  DLMYTLQLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQELLKQESLLPDKHTFPFV 231
           D  Y  ++FNQI  PN+F++NTLI A A S D K+QA  +F  +L++ S+ PDKHTFPF+
Sbjct: 73  DFDYACRVFNQIDNPNSFMWNTLIGACARSLDRKEQAIEIFYRMLEEGSVEPDKHTFPFL 132

Query: 232 LKACAYLFALSEGKQTHAHVLKHGFGSDVYVNNSLIHFYASCGHSEIARKVFDKM 396
           LKACAY+FALSEG+Q HA + K G   DVYV NSLIH YASCG   +A KVF+KM
Sbjct: 133 LKACAYVFALSEGRQAHAQIFKLGLDLDVYVGNSLIHLYASCGCLSMALKVFEKM 187



 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 42/117 (35%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
 Frame = +1

Query: 55  LMYTLQLFNQIPFPNTFIYNTLIRAYAHSKDHKKQAFLLFQELLKQESLLPDKHTFPFVL 234
           L   L++F ++P  +   +N +I AY  S   +  A  LF E+  Q S  PD +T   ++
Sbjct: 177 LSMALKVFEKMPLRSLVSWNVMIDAYVQSGLFEN-ALKLFVEM--QNSFEPDGYTMQSIV 233

Query: 235 KACAYLFALSEGKQTHAHVLKHGFGS---DVYVNNSLIHFYASCGHSEIARKVFDKM 396
            ACA + ALS G   HA+VL+   G+   DV +N+SL+  Y+ CG   +A++VF+ M
Sbjct: 234 SACAGIGALSLGMWAHAYVLRKASGAMAGDVLINSSLVDMYSKCGSLRMAQQVFETM 290