BLASTX nr result

ID: Rehmannia23_contig00031118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00031118
         (465 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio...    59   7e-07
emb|CBI27416.3| unnamed protein product [Vitis vinifera]               59   7e-07
ref|XP_006367876.1| PREDICTED: transcription factor bHLH49-like ...    58   1e-06
ref|XP_004228422.1| PREDICTED: transcription factor bHLH49-like ...    57   3e-06

>ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH49-like
           [Vitis vinifera]
          Length = 609

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
 Frame = -3

Query: 463 ALCGGFREPTSQHMQAASVWDDELHNVVHNGFNLSAPLNSPDLSVSL-PGHTKAE 302
           A+ GG++E   Q     +VW+DELHNVV  GF+  APLNS DL+ SL PGH KAE
Sbjct: 557 AMSGGYKESAPQ---LPNVWEDELHNVVQMGFSTGAPLNSQDLNGSLPPGHMKAE 608


>emb|CBI27416.3| unnamed protein product [Vitis vinifera]
          Length = 496

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
 Frame = -3

Query: 463 ALCGGFREPTSQHMQAASVWDDELHNVVHNGFNLSAPLNSPDLSVSL-PGHTKAE 302
           A+ GG++E   Q     +VW+DELHNVV  GF+  APLNS DL+ SL PGH KAE
Sbjct: 444 AMSGGYKESAPQ---LPNVWEDELHNVVQMGFSTGAPLNSQDLNGSLPPGHMKAE 495


>ref|XP_006367876.1| PREDICTED: transcription factor bHLH49-like isoform X1 [Solanum
           tuberosum] gi|565404938|ref|XP_006367877.1| PREDICTED:
           transcription factor bHLH49-like isoform X2 [Solanum
           tuberosum]
          Length = 535

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 28/54 (51%), Positives = 36/54 (66%)
 Frame = -3

Query: 460 LCGGFREPTSQHMQAASVWDDELHNVVHNGFNLSAPLNSPDLSVSLPGHTKAEP 299
           + GG+R+P+SQ     +VWDD+LHNVV  GFN +APL+  DLS   P   K EP
Sbjct: 485 MSGGYRDPSSQ---VPNVWDDQLHNVVDMGFNSTAPLDCQDLSSLPPDQMKTEP 535


>ref|XP_004228422.1| PREDICTED: transcription factor bHLH49-like [Solanum lycopersicum]
          Length = 537

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 28/55 (50%), Positives = 36/55 (65%)
 Frame = -3

Query: 463 ALCGGFREPTSQHMQAASVWDDELHNVVHNGFNLSAPLNSPDLSVSLPGHTKAEP 299
           ++ GG+R+P+SQ     SVWDD+LHNVV  GF  +APL+  DLS   P   K EP
Sbjct: 486 SMSGGYRDPSSQ---VPSVWDDQLHNVVDMGFTSTAPLDCQDLSSLPPDQMKTEP 537


Top