BLASTX nr result

ID: Rehmannia23_contig00030433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00030433
         (626 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006352858.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   112   9e-23
ref|XP_004245897.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   106   5e-21
emb|CBI33881.3| unnamed protein product [Vitis vinifera]               84   3e-14
gb|EXB99718.1| Ubiquitin carboxyl-terminal hydrolase 21 [Morus n...    80   6e-13
ref|XP_004165982.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    66   9e-09
ref|XP_004148760.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    66   9e-09
ref|XP_006491731.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    60   7e-07
ref|XP_006428428.1| hypothetical protein CICLE_v10013784mg [Citr...    60   7e-07
gb|EMJ10281.1| hypothetical protein PRUPE_ppa003467mg [Prunus pe...    59   9e-07

>ref|XP_006352858.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Solanum
           tuberosum]
          Length = 712

 Score =  112 bits (280), Expect = 9e-23
 Identities = 60/121 (49%), Positives = 84/121 (69%), Gaps = 12/121 (9%)
 Frame = +2

Query: 56  EEPLRSPSPEIYREDPPDAGFSIPRNHLRTVDSIACKRRLDKDMD-DLETRQAFSFVKKN 232
           + P RSPSPEIYREDPPD  + IP  HLRTV  ++CK++L KD++ D+E +QA S +KKN
Sbjct: 592 DTPPRSPSPEIYREDPPDNDYHIPHGHLRTVGQVSCKKQLQKDLEQDMERKQACSLIKKN 651

Query: 233 MPGSRGQQMLDALRRSKTEASVN-RKKGRKSG--QDD--------SSIRPVLRPLVAGTH 379
           MPGSR QQ+L A++ S++E S N R++G +    +DD        SSI   +RP++AG+ 
Sbjct: 652 MPGSRAQQLLAAMQGSRSEGSANKRRRGMEVSPTRDDSNPTSRRRSSIGSTMRPVMAGSM 711

Query: 380 R 382
           R
Sbjct: 712 R 712


>ref|XP_004245897.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like [Solanum
           lycopersicum]
          Length = 714

 Score =  106 bits (265), Expect = 5e-21
 Identities = 57/122 (46%), Positives = 75/122 (61%), Gaps = 13/122 (10%)
 Frame = +2

Query: 56  EEPLRSPSPEIYREDPPDAGFSIPRNHLRTVDSIACKRRLDKD--MDDLETRQAFSFVKK 229
           + P RSPSPEIYREDPPD  + IPR HLR V  ++CK++L KD    D+E +QA   +KK
Sbjct: 593 DTPPRSPSPEIYREDPPDNDYHIPRGHLRMVGQVSCKKQLQKDDVEQDMERKQACFLIKK 652

Query: 230 NMPGSRGQQMLDAL-----------RRSKTEASVNRKKGRKSGQDDSSIRPVLRPLVAGT 376
           NMPGSRGQQ+L A+           RR + E S  R     + +  SSI   +RP++AG+
Sbjct: 653 NMPGSRGQQLLAAMQGLRSEGSAKKRRRRMEVSPTRDDSNSTSRRRSSIGSTMRPVMAGS 712

Query: 377 HR 382
            R
Sbjct: 713 MR 714


>emb|CBI33881.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 37/88 (42%), Positives = 61/88 (69%)
 Frame = +2

Query: 56  EEPLRSPSPEIYREDPPDAGFSIPRNHLRTVDSIACKRRLDKDMDDLETRQAFSFVKKNM 235
           + P RSPSP+IY E+PP+  ++IPR HLR  + +ACK+ L+K ++D   R+A     KNM
Sbjct: 406 QTPPRSPSPDIYAEEPPEVSYNIPRGHLRQKNQVACKKPLNKALEDSRKREACKLC-KNM 464

Query: 236 PGSRGQQMLDALRRSKTEASVNRKKGRK 319
           P SR  +++ A++ S++E S+ +KK ++
Sbjct: 465 PASRSMRLMAAMKGSQSEGSLGKKKSKR 492


>gb|EXB99718.1| Ubiquitin carboxyl-terminal hydrolase 21 [Morus notabilis]
          Length = 667

 Score = 79.7 bits (195), Expect = 6e-13
 Identities = 40/112 (35%), Positives = 66/112 (58%), Gaps = 9/112 (8%)
 Frame = +2

Query: 62  PLRSPSPEIYREDPPDAGFSIPRNHLRTVDSIACKRRLDKDMDDLETRQAFSFVKKNMPG 241
           P R+ SP+++  + P   + IPRNHL++ D   CKR L+K  DD ET++A  ++ ++MP 
Sbjct: 553 PPRARSPDVFSFETPGPSYQIPRNHLKSEDQPTCKRLLNKRPDDSETKEAVRYLTRSMPS 612

Query: 242 SRGQQMLDALRRSKTEASVNRKK---------GRKSGQDDSSIRPVLRPLVA 370
           SRG ++LDA+ R ++E +  +K+         G  SG+  S+      P+VA
Sbjct: 613 SRGSRLLDAMFRPQSEGAARKKRKFEFPCKGAGPASGRHKSNNGSAAHPVVA 664


>ref|XP_004165982.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Cucumis
           sativus]
          Length = 621

 Score = 65.9 bits (159), Expect = 9e-09
 Identities = 37/89 (41%), Positives = 59/89 (66%), Gaps = 2/89 (2%)
 Frame = +2

Query: 62  PLRSPSPE-IYREDPPDAGFSIPRNHLRTVDSIACKRRLDKDMDDLETRQAFSFVKKNMP 238
           P+RSPSP+ ++R   P+  + IP +HL+T         L+K ++D E + A  +VKKNMP
Sbjct: 516 PVRSPSPDNVFRT--PEPQYRIPVDHLKTEKCSTSGSPLNKGVEDSERKAAMRYVKKNMP 573

Query: 239 GSRGQQMLDALRRSKTE-ASVNRKKGRKS 322
           GSRG +M+ A+  S++E +S+N+KK  +S
Sbjct: 574 GSRGSKMIAAILGSQSEGSSLNKKKRLRS 602


>ref|XP_004148760.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Cucumis
           sativus]
          Length = 676

 Score = 65.9 bits (159), Expect = 9e-09
 Identities = 37/89 (41%), Positives = 59/89 (66%), Gaps = 2/89 (2%)
 Frame = +2

Query: 62  PLRSPSPE-IYREDPPDAGFSIPRNHLRTVDSIACKRRLDKDMDDLETRQAFSFVKKNMP 238
           P+RSPSP+ ++R   P+  + IP +HL+T         L+K ++D E + A  +VKKNMP
Sbjct: 571 PVRSPSPDNVFRT--PEPQYRIPVDHLKTEKCSTSGSPLNKGVEDSERKAAMRYVKKNMP 628

Query: 239 GSRGQQMLDALRRSKTE-ASVNRKKGRKS 322
           GSRG +M+ A+  S++E +S+N+KK  +S
Sbjct: 629 GSRGSKMIAAILGSQSEGSSLNKKKRLRS 657


>ref|XP_006491731.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like isoform X2
           [Citrus sinensis]
          Length = 682

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 32/87 (36%), Positives = 52/87 (59%)
 Frame = +2

Query: 62  PLRSPSPEIYREDPPDAGFSIPRNHLRTVDSIACKRRLDKDMDDLETRQAFSFVKKNMPG 241
           P RSPSP+I+   P +  + +PR HL+     ACK +L+++  DLE ++A   +KK M G
Sbjct: 575 PPRSPSPDIHSGKPRET-YQVPREHLKLESKGACKTQLERNGKDLERQEAVRCIKKTMTG 633

Query: 242 SRGQQMLDALRRSKTEASVNRKKGRKS 322
            R  +++ A+     + S+NRK+  KS
Sbjct: 634 ERYMKLMAAV----NDVSLNRKRRLKS 656


>ref|XP_006428428.1| hypothetical protein CICLE_v10013784mg [Citrus clementina]
           gi|568877407|ref|XP_006491730.1| PREDICTED: ubiquitin
           carboxyl-terminal hydrolase 21-like isoform X1 [Citrus
           sinensis] gi|557530485|gb|ESR41668.1| hypothetical
           protein CICLE_v10013784mg [Citrus clementina]
          Length = 683

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 32/87 (36%), Positives = 52/87 (59%)
 Frame = +2

Query: 62  PLRSPSPEIYREDPPDAGFSIPRNHLRTVDSIACKRRLDKDMDDLETRQAFSFVKKNMPG 241
           P RSPSP+I+   P +  + +PR HL+     ACK +L+++  DLE ++A   +KK M G
Sbjct: 576 PPRSPSPDIHSGKPRET-YQVPREHLKLESKGACKTQLERNGKDLERQEAVRCIKKTMTG 634

Query: 242 SRGQQMLDALRRSKTEASVNRKKGRKS 322
            R  +++ A+     + S+NRK+  KS
Sbjct: 635 ERYMKLMAAV----NDVSLNRKRRLKS 657


>gb|EMJ10281.1| hypothetical protein PRUPE_ppa003467mg [Prunus persica]
          Length = 572

 Score = 59.3 bits (142), Expect = 9e-07
 Identities = 34/118 (28%), Positives = 61/118 (51%), Gaps = 22/118 (18%)
 Frame = +2

Query: 62  PLRSPSPEIYREDPPDAGFSIPRNHLRTVDSIACKRRL---------------------D 178
           P RSPSP++   + P+  + +PR+H ++VD++ACKR L                     +
Sbjct: 439 PPRSPSPDLPSFESPEPIYCLPRDHSKSVDNVACKRSLNNIIRSDHLKSADNALCKRPSN 498

Query: 179 KDMDDLETRQAFSFV-KKNMPGSRGQQMLDALRRSKTEASVNRKKGRKSGQDDSSIRP 349
            D+DD +  +AF ++ KK++   RG Q+L A+   ++E S N+++ R        + P
Sbjct: 499 NDVDDSKRIEAFRYLSKKSLTRDRGSQLLAAMVGPQSEGSSNKRRKRVGSSPCKKVSP 556


Top