BLASTX nr result
ID: Rehmannia23_contig00030267
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00030267
(346 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004240011.1| PREDICTED: structural maintenance of chromos... 169 3e-40
ref|XP_006355548.1| PREDICTED: structural maintenance of chromos... 169 3e-40
ref|XP_002278113.1| PREDICTED: structural maintenance of chromos... 152 6e-35
ref|XP_002510971.1| structural maintenance of chromosomes 6 smc6... 149 3e-34
ref|XP_002871281.1| structural maintenance of chromosomes family... 149 5e-34
ref|NP_196383.1| structural maintenance of chromosomes 6A [Arabi... 148 6e-34
gb|ACQ84165.1| truncated structural maintenance of chromosomes f... 148 6e-34
ref|XP_006421634.1| hypothetical protein CICLE_v100042042mg, par... 147 1e-33
ref|XP_006490140.1| PREDICTED: structural maintenance of chromos... 146 2e-33
gb|EMJ20939.1| hypothetical protein PRUPE_ppa026132mg, partial [... 145 4e-33
ref|XP_006394503.1| hypothetical protein EUTSA_v10003566mg [Eutr... 145 7e-33
ref|XP_004309038.1| PREDICTED: structural maintenance of chromos... 144 9e-33
ref|XP_004166709.1| PREDICTED: LOW QUALITY PROTEIN: structural m... 144 1e-32
ref|XP_004146918.1| PREDICTED: structural maintenance of chromos... 144 1e-32
ref|XP_006286959.1| hypothetical protein CARUB_v10000108mg [Caps... 144 2e-32
ref|XP_006399247.1| hypothetical protein EUTSA_v10012532mg [Eutr... 143 2e-32
ref|NP_200954.1| protein SMC6B [Arabidopsis thaliana] gi|7533391... 143 2e-32
ref|XP_006279856.1| hypothetical protein CARUB_v10028478mg [Caps... 142 3e-32
gb|EXC13936.1| hypothetical protein L484_006634 [Morus notabilis] 142 5e-32
ref|XP_002866437.1| hypothetical protein ARALYDRAFT_496305 [Arab... 142 6e-32
>ref|XP_004240011.1| PREDICTED: structural maintenance of chromosomes protein 6-like
[Solanum lycopersicum]
Length = 1054
Score = 169 bits (429), Expect = 3e-40
Identities = 80/90 (88%), Positives = 87/90 (96%)
Frame = -2
Query: 270 PTRRPNRMQAGIISRIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILTALCVAFGSR 91
PT RP R+QAGIIS+IRLENFMCHSNLEI+FGDWVNFITGQNGSGKSAILTALCVAFGSR
Sbjct: 6 PTGRPKRLQAGIISKIRLENFMCHSNLEIDFGDWVNFITGQNGSGKSAILTALCVAFGSR 65
Query: 90 ARGTQRANTMKDFIKTGCSHALVQVEIKNQ 1
ARGTQRAN++KDFIKTGCSHALV VE+KN+
Sbjct: 66 ARGTQRANSLKDFIKTGCSHALVHVEMKNR 95
>ref|XP_006355548.1| PREDICTED: structural maintenance of chromosomes protein 6B-like
[Solanum tuberosum]
Length = 1054
Score = 169 bits (428), Expect = 3e-40
Identities = 80/90 (88%), Positives = 86/90 (95%)
Frame = -2
Query: 270 PTRRPNRMQAGIISRIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILTALCVAFGSR 91
PT RP R+QAGIIS+IRLENFMCHSNLEI+FGDWVNFITGQNGSGKSAILTALCVAFGSR
Sbjct: 6 PTGRPKRLQAGIISKIRLENFMCHSNLEIDFGDWVNFITGQNGSGKSAILTALCVAFGSR 65
Query: 90 ARGTQRANTMKDFIKTGCSHALVQVEIKNQ 1
ARGTQRAN +KDFIKTGCSHALV VE+KN+
Sbjct: 66 ARGTQRANALKDFIKTGCSHALVHVEMKNR 95
>ref|XP_002278113.1| PREDICTED: structural maintenance of chromosomes protein 6-like
[Vitis vinifera]
Length = 1057
Score = 152 bits (383), Expect = 6e-35
Identities = 71/99 (71%), Positives = 85/99 (85%)
Frame = -2
Query: 297 MADSRVFIDPTRRPNRMQAGIISRIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILT 118
M DS VF P +R AGII +IRLENFMCHS+L+IE G+W+NF+TGQNGSGKSAILT
Sbjct: 1 MGDSTVFTQPLSASHRSSAGIILKIRLENFMCHSSLQIELGEWLNFVTGQNGSGKSAILT 60
Query: 117 ALCVAFGSRARGTQRANTMKDFIKTGCSHALVQVEIKNQ 1
ALCVAFGSRA+ TQRA T+K+FIKTGCS+A++QVEIKN+
Sbjct: 61 ALCVAFGSRAKETQRATTLKEFIKTGCSYAVIQVEIKNE 99
>ref|XP_002510971.1| structural maintenance of chromosomes 6 smc6, putative [Ricinus
communis] gi|223550086|gb|EEF51573.1| structural
maintenance of chromosomes 6 smc6, putative [Ricinus
communis]
Length = 1058
Score = 149 bits (377), Expect = 3e-34
Identities = 71/99 (71%), Positives = 85/99 (85%)
Frame = -2
Query: 297 MADSRVFIDPTRRPNRMQAGIISRIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILT 118
M DS VF + +R AG ++RIRLENFMCHSNL+IE WVNFITGQNGSGKSAILT
Sbjct: 1 MGDSTVFSECNPTRSRSGAGTVTRIRLENFMCHSNLQIELCPWVNFITGQNGSGKSAILT 60
Query: 117 ALCVAFGSRARGTQRANTMKDFIKTGCSHALVQVEIKNQ 1
ALC+AFGSRA+GTQRA+T+KDFIKTGCS+A+V+VE+KN+
Sbjct: 61 ALCIAFGSRAKGTQRASTLKDFIKTGCSYAVVEVEVKNE 99
>ref|XP_002871281.1| structural maintenance of chromosomes family protein [Arabidopsis
lyrata subsp. lyrata] gi|297317118|gb|EFH47540.1|
structural maintenance of chromosomes family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 1063
Score = 149 bits (375), Expect = 5e-34
Identities = 72/84 (85%), Positives = 76/84 (90%)
Frame = -2
Query: 252 RMQAGIISRIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILTALCVAFGSRARGTQR 73
R +G I RIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILTALCVAFG RARGTQR
Sbjct: 16 RPSSGTIVRIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILTALCVAFGCRARGTQR 75
Query: 72 ANTMKDFIKTGCSHALVQVEIKNQ 1
A T+KDFIK GCS+ALV VE+KNQ
Sbjct: 76 AATLKDFIKNGCSYALVHVELKNQ 99
>ref|NP_196383.1| structural maintenance of chromosomes 6A [Arabidopsis thaliana]
gi|75171524|sp|Q9FLR5.1|SMC6A_ARATH RecName:
Full=Structural maintenance of chromosomes protein 6A
gi|9759587|dbj|BAB11444.1| SMC-like protein [Arabidopsis
thaliana] gi|332003807|gb|AED91190.1| structural
maintenance of chromosomes 6A [Arabidopsis thaliana]
Length = 1058
Score = 148 bits (374), Expect = 6e-34
Identities = 72/81 (88%), Positives = 76/81 (93%)
Frame = -2
Query: 243 AGIISRIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILTALCVAFGSRARGTQRANT 64
+G I RIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILTALCVAFG RARGTQRA T
Sbjct: 20 SGKILRIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILTALCVAFGCRARGTQRAAT 79
Query: 63 MKDFIKTGCSHALVQVEIKNQ 1
+KDFIKTGCS+ALV VE+KNQ
Sbjct: 80 LKDFIKTGCSYALVYVELKNQ 100
>gb|ACQ84165.1| truncated structural maintenance of chromosomes family protein 6A
[Arabidopsis thaliana]
Length = 876
Score = 148 bits (374), Expect = 6e-34
Identities = 72/81 (88%), Positives = 76/81 (93%)
Frame = -2
Query: 243 AGIISRIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILTALCVAFGSRARGTQRANT 64
+G I RIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILTALCVAFG RARGTQRA T
Sbjct: 20 SGKILRIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILTALCVAFGCRARGTQRAAT 79
Query: 63 MKDFIKTGCSHALVQVEIKNQ 1
+KDFIKTGCS+ALV VE+KNQ
Sbjct: 80 LKDFIKTGCSYALVYVELKNQ 100
>ref|XP_006421634.1| hypothetical protein CICLE_v100042042mg, partial [Citrus
clementina] gi|557523507|gb|ESR34874.1| hypothetical
protein CICLE_v100042042mg, partial [Citrus clementina]
Length = 484
Score = 147 bits (372), Expect = 1e-33
Identities = 69/100 (69%), Positives = 84/100 (84%)
Frame = -2
Query: 300 QMADSRVFIDPTRRPNRMQAGIISRIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAIL 121
+M D R + P R AG I+R+RLENFMCHS+L+IE G+WVNFITGQNGSGKSAIL
Sbjct: 61 RMGDYRFISESGYGPQRSGAGTITRVRLENFMCHSSLQIELGEWVNFITGQNGSGKSAIL 120
Query: 120 TALCVAFGSRARGTQRANTMKDFIKTGCSHALVQVEIKNQ 1
TALC+AFG RA+GTQRA T+KDFIKTGCS+A+V+VE+KN+
Sbjct: 121 TALCIAFGCRAKGTQRAATLKDFIKTGCSYAMVEVELKNR 160
>ref|XP_006490140.1| PREDICTED: structural maintenance of chromosomes protein 6B-like
[Citrus sinensis]
Length = 1058
Score = 146 bits (369), Expect = 2e-33
Identities = 69/99 (69%), Positives = 83/99 (83%)
Frame = -2
Query: 297 MADSRVFIDPTRRPNRMQAGIISRIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILT 118
M D R + P R AG I+R+RLENFMCHS+L+IE G+WVNFITGQNGSGKSAILT
Sbjct: 1 MGDYRFSSESGYGPQRSGAGTITRVRLENFMCHSSLQIELGEWVNFITGQNGSGKSAILT 60
Query: 117 ALCVAFGSRARGTQRANTMKDFIKTGCSHALVQVEIKNQ 1
ALC+AFG RA+GTQRA T+KDFIKTGCS+A+V+VE+KN+
Sbjct: 61 ALCIAFGCRAKGTQRAATLKDFIKTGCSYAMVEVELKNR 99
>gb|EMJ20939.1| hypothetical protein PRUPE_ppa026132mg, partial [Prunus persica]
Length = 418
Score = 145 bits (367), Expect = 4e-33
Identities = 67/84 (79%), Positives = 78/84 (92%)
Frame = -2
Query: 252 RMQAGIISRIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILTALCVAFGSRARGTQR 73
R +GI+ R+RLENFMCHS+L+IE GDWVNFITGQNGSGKSAILTALCVAFG RA+GTQR
Sbjct: 11 RSGSGIVKRVRLENFMCHSSLQIELGDWVNFITGQNGSGKSAILTALCVAFGCRAKGTQR 70
Query: 72 ANTMKDFIKTGCSHALVQVEIKNQ 1
A+T+KDFIKTGCS+A+V VE+KNQ
Sbjct: 71 ASTLKDFIKTGCSYAVVHVELKNQ 94
>ref|XP_006394503.1| hypothetical protein EUTSA_v10003566mg [Eutrema salsugineum]
gi|557091142|gb|ESQ31789.1| hypothetical protein
EUTSA_v10003566mg [Eutrema salsugineum]
Length = 1057
Score = 145 bits (365), Expect = 7e-33
Identities = 68/84 (80%), Positives = 78/84 (92%)
Frame = -2
Query: 252 RMQAGIISRIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILTALCVAFGSRARGTQR 73
R +G I RI+LENFMCHSNL+IEFG+WVNFITGQNGSGKSAILTALCVAFG RA+GTQR
Sbjct: 16 RSGSGTILRIKLENFMCHSNLQIEFGEWVNFITGQNGSGKSAILTALCVAFGCRAKGTQR 75
Query: 72 ANTMKDFIKTGCSHALVQVEIKNQ 1
A+T+KDFIKTGCS+A+V VE+KNQ
Sbjct: 76 ASTLKDFIKTGCSYAVVHVEMKNQ 99
>ref|XP_004309038.1| PREDICTED: structural maintenance of chromosomes protein 6-like
[Fragaria vesca subsp. vesca]
Length = 1052
Score = 144 bits (364), Expect = 9e-33
Identities = 67/87 (77%), Positives = 79/87 (90%)
Frame = -2
Query: 261 RPNRMQAGIISRIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILTALCVAFGSRARG 82
R N +AGI+ +IRLENFMCH++L+IE GDWVNFITGQNGSGKSAILTALCVAFGSRA+
Sbjct: 8 RRNSSKAGIVQKIRLENFMCHTSLQIELGDWVNFITGQNGSGKSAILTALCVAFGSRAKE 67
Query: 81 TQRANTMKDFIKTGCSHALVQVEIKNQ 1
TQR +T+KDFIKTGCS+A+V VE+KNQ
Sbjct: 68 TQRGSTLKDFIKTGCSYAVVHVELKNQ 94
>ref|XP_004166709.1| PREDICTED: LOW QUALITY PROTEIN: structural maintenance of
chromosomes protein 6-like, partial [Cucumis sativus]
Length = 969
Score = 144 bits (363), Expect = 1e-32
Identities = 70/98 (71%), Positives = 81/98 (82%)
Frame = -2
Query: 297 MADSRVFIDPTRRPNRMQAGIISRIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILT 118
MADSR P+R AGI+ IRLENFMCHSNL I+FG+W+NFITGQNGSGKSAILT
Sbjct: 1 MADSRAL------PHRSGAGIVKSIRLENFMCHSNLYIQFGEWLNFITGQNGSGKSAILT 54
Query: 117 ALCVAFGSRARGTQRANTMKDFIKTGCSHALVQVEIKN 4
ALCVAFG RA+GTQRA T+KDFIKTGCSHA++ V ++N
Sbjct: 55 ALCVAFGCRAKGTQRAATLKDFIKTGCSHAVIHVVLQN 92
>ref|XP_004146918.1| PREDICTED: structural maintenance of chromosomes protein 6-like
[Cucumis sativus]
Length = 1052
Score = 144 bits (363), Expect = 1e-32
Identities = 70/98 (71%), Positives = 81/98 (82%)
Frame = -2
Query: 297 MADSRVFIDPTRRPNRMQAGIISRIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILT 118
MADSR P+R AGI+ IRLENFMCHSNL I+FG+W+NFITGQNGSGKSAILT
Sbjct: 1 MADSRAL------PHRSGAGIVKSIRLENFMCHSNLYIQFGEWLNFITGQNGSGKSAILT 54
Query: 117 ALCVAFGSRARGTQRANTMKDFIKTGCSHALVQVEIKN 4
ALCVAFG RA+GTQRA T+KDFIKTGCSHA++ V ++N
Sbjct: 55 ALCVAFGCRAKGTQRAATLKDFIKTGCSHAVIHVVLQN 92
>ref|XP_006286959.1| hypothetical protein CARUB_v10000108mg [Capsella rubella]
gi|482555665|gb|EOA19857.1| hypothetical protein
CARUB_v10000108mg [Capsella rubella]
Length = 1052
Score = 144 bits (362), Expect = 2e-32
Identities = 68/78 (87%), Positives = 73/78 (93%)
Frame = -2
Query: 234 ISRIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILTALCVAFGSRARGTQRANTMKD 55
I+RIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILTALCVAFG RA+GTQRA +KD
Sbjct: 18 IARIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILTALCVAFGCRAKGTQRATALKD 77
Query: 54 FIKTGCSHALVQVEIKNQ 1
FIK GCS+ALV VE+KNQ
Sbjct: 78 FIKIGCSYALVHVELKNQ 95
>ref|XP_006399247.1| hypothetical protein EUTSA_v10012532mg [Eutrema salsugineum]
gi|557100337|gb|ESQ40700.1| hypothetical protein
EUTSA_v10012532mg [Eutrema salsugineum]
Length = 1057
Score = 143 bits (361), Expect = 2e-32
Identities = 72/96 (75%), Positives = 80/96 (83%), Gaps = 5/96 (5%)
Frame = -2
Query: 273 DPTRRPNRMQ-----AGIISRIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILTALC 109
D RR N + +G I R+RLENFMCHSNLEIEFG+WVNFITGQNGSGKSAILTALC
Sbjct: 4 DGYRRSNPLDDQHSGSGKILRLRLENFMCHSNLEIEFGEWVNFITGQNGSGKSAILTALC 63
Query: 108 VAFGSRARGTQRANTMKDFIKTGCSHALVQVEIKNQ 1
VAFG RA+GTQRA+T+KDFIKTGCS ALV VE+ NQ
Sbjct: 64 VAFGCRAKGTQRASTLKDFIKTGCSDALVHVEMNNQ 99
>ref|NP_200954.1| protein SMC6B [Arabidopsis thaliana]
gi|75333915|sp|Q9FII7.1|SMC6B_ARATH RecName:
Full=Structural maintenance of chromosomes protein 6B;
AltName: Full=DNA repair protein RAD18; Short=AtRAD18
gi|10177176|dbj|BAB10445.1| SMC-like protein
[Arabidopsis thaliana] gi|332010088|gb|AED97471.1|
protein SMC6B [Arabidopsis thaliana]
Length = 1057
Score = 143 bits (361), Expect = 2e-32
Identities = 68/83 (81%), Positives = 77/83 (92%)
Frame = -2
Query: 252 RMQAGIISRIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILTALCVAFGSRARGTQR 73
R +G I RI++ENFMCHSNL+IEFG+WVNFITGQNGSGKSAILTALCVAFG RARGTQR
Sbjct: 16 RSGSGSILRIKVENFMCHSNLQIEFGEWVNFITGQNGSGKSAILTALCVAFGCRARGTQR 75
Query: 72 ANTMKDFIKTGCSHALVQVEIKN 4
A T+KDFIKTGCS+A+VQVE+KN
Sbjct: 76 AATLKDFIKTGCSYAVVQVEMKN 98
>ref|XP_006279856.1| hypothetical protein CARUB_v10028478mg [Capsella rubella]
gi|482548560|gb|EOA12754.1| hypothetical protein
CARUB_v10028478mg [Capsella rubella]
Length = 1057
Score = 142 bits (359), Expect = 3e-32
Identities = 68/84 (80%), Positives = 76/84 (90%)
Frame = -2
Query: 252 RMQAGIISRIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILTALCVAFGSRARGTQR 73
R +G I RI +ENFMCHSNL+IEFG+WVNFITGQNGSGKSAILTALCVAFG RARGTQR
Sbjct: 16 RSGSGTILRITVENFMCHSNLQIEFGEWVNFITGQNGSGKSAILTALCVAFGCRARGTQR 75
Query: 72 ANTMKDFIKTGCSHALVQVEIKNQ 1
A T+KDFIKTGCS+A+V VE+KNQ
Sbjct: 76 AATLKDFIKTGCSYAVVHVEMKNQ 99
>gb|EXC13936.1| hypothetical protein L484_006634 [Morus notabilis]
Length = 1025
Score = 142 bits (358), Expect = 5e-32
Identities = 69/84 (82%), Positives = 76/84 (90%)
Frame = -2
Query: 252 RMQAGIISRIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILTALCVAFGSRARGTQR 73
R +AGI+ RIRLENFMCHSNLEIE GD VNFITGQNGSGKSAILTALCVAFG RA+GTQR
Sbjct: 11 RPKAGIVKRIRLENFMCHSNLEIELGDRVNFITGQNGSGKSAILTALCVAFGCRAKGTQR 70
Query: 72 ANTMKDFIKTGCSHALVQVEIKNQ 1
A+T+KDFIK C +ALVQVEIKN+
Sbjct: 71 ASTLKDFIKKNCGYALVQVEIKNE 94
>ref|XP_002866437.1| hypothetical protein ARALYDRAFT_496305 [Arabidopsis lyrata subsp.
lyrata] gi|297312272|gb|EFH42696.1| hypothetical protein
ARALYDRAFT_496305 [Arabidopsis lyrata subsp. lyrata]
Length = 1057
Score = 142 bits (357), Expect = 6e-32
Identities = 67/83 (80%), Positives = 76/83 (91%)
Frame = -2
Query: 252 RMQAGIISRIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILTALCVAFGSRARGTQR 73
R +G I RI++ENFMCHSNL+IEFG+WVNFITGQNGSGKSAILTALCVAFG RARGTQR
Sbjct: 16 RSGSGTILRIKVENFMCHSNLQIEFGEWVNFITGQNGSGKSAILTALCVAFGCRARGTQR 75
Query: 72 ANTMKDFIKTGCSHALVQVEIKN 4
A T+KDFIKTGCS+A+V VE+KN
Sbjct: 76 AATLKDFIKTGCSYAVVHVEMKN 98