BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00030093
         (387 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    84   3e-14
gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]          77   3e-12
gb|EMJ10237.1| hypothetical protein PRUPE_ppa014970mg [Prunus pe...    76   4e-12
ref|XP_004306191.1| PREDICTED: putative ribonuclease H protein A...    76   5e-12
gb|EMJ12186.1| hypothetical protein PRUPE_ppa021345mg [Prunus pe...    75   7e-12
gb|EMJ00800.1| hypothetical protein PRUPE_ppa023095mg, partial [...    75   9e-12
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    75   1e-11
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...    75   1e-11
gb|AAP53315.2| retrotransposon protein, putative, unclassified [...    75   1e-11
ref|XP_004292479.1| PREDICTED: putative ribonuclease H protein A...    74   2e-11
ref|XP_003621614.1| DNA-directed RNA polymerase III subunit RPC6...    74   2e-11
gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japo...    74   3e-11
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...    74   3e-11
gb|EEC81662.1| hypothetical protein OsI_25211 [Oryza sativa Indi...    74   3e-11
gb|EEC84030.1| hypothetical protein OsI_30257 [Oryza sativa Indi...    73   3e-11
gb|EMJ20613.1| hypothetical protein PRUPE_ppa021915mg, partial [...    73   4e-11
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...    72   6e-11
gb|ABA91325.1| retrotransposon protein, putative, unclassified [...    72   1e-10
ref|XP_002466618.1| hypothetical protein SORBIDRAFT_01g011130 [S...    72   1e-10
gb|EEC72938.1| hypothetical protein OsI_06800 [Oryza sativa Indi...    72   1e-10

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
 Frame = +2

Query: 50   SSSSGPN-PAWKSLWKLNIPPRIKLFLWKCCTDTIATTDNLARRGIINSEPCPLCSAPEN 226
            S+S GPN   W+ +WK  IPP++KLF WK   + +A   N+ +RG+     CP C   E 
Sbjct: 1041 STSRGPNLKLWQKIWKAKIPPKVKLFSWKAIHNGLAVYTNMRKRGMNIDGACPRCGEKEE 1100

Query: 227  SATHIFFSCPFASQVWYNAGLYHFLAQFEQPSWRLWIQEIISSPRD 364
            +  H+ + C  +S+ WY + L       E  S+R+W++ ++ + +D
Sbjct: 1101 TTEHLIWGCDESSRAWYISPLRIHTGNIEAGSFRIWVESLLDTHKD 1146


>gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]
          Length = 593

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 29/66 (43%), Positives = 39/66 (59%)
 Frame = +2

Query: 77  WKSLWKLNIPPRIKLFLWKCCTDTIATTDNLARRGIINSEPCPLCSAPENSATHIFFSCP 256
           WK+ W L  PPRIK  LW+   + ++   NL RRGI   E CP C+ P  +A H+FF CP
Sbjct: 281 WKTCWGLRCPPRIKTLLWRLIDNNLSVRTNLTRRGIQVDEVCPCCAGPSETAAHLFFCCP 340

Query: 257 FASQVW 274
           +   +W
Sbjct: 341 YTLDIW 346


>gb|EMJ10237.1| hypothetical protein PRUPE_ppa014970mg [Prunus persica]
          Length = 352

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
 Frame = +2

Query: 50  SSSSGPNPA-WKSLWKLNIPPRIKLFLWKCCTDTIATTDNLARRGIINSEPCPLCSAPEN 226
           SSS   +P  WK +WK ++PP+I+ FLW+   + +AT+ NL ++ I  S  CPLC+    
Sbjct: 29  SSSMAIDPRLWKQIWKADVPPKIRNFLWRALRNCLATSANLHKKKIARSPVCPLCNDHPE 88

Query: 227 SATHIFFSCPFASQVWYNAGLYHFLAQFEQPSWRLWIQEII 349
           +A HI   CP+   VW+   L   + +    S+  W+  +I
Sbjct: 89  TAEHILLLCPWVEPVWFGCSLNLRINRQAVTSFGQWLGNVI 129


>ref|XP_004306191.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 755

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 35/116 (30%), Positives = 63/116 (54%)
 Frame = +2

Query: 5   MLNSVLSPLTDTEAASSSSGPNPAWKSLWKLNIPPRIKLFLWKCCTDTIATTDNLARRGI 184
           +  + ++ +   +A+SS S  +  WK +W L   P+IK+F+WK  ++ +AT  NL  R I
Sbjct: 490 LAQATMTSIPKLKASSSHSVTSAVWKWIWNLQTLPKIKIFIWKAVSNFVATKGNLHFRHI 549

Query: 185 INSEPCPLCSAPENSATHIFFSCPFASQVWYNAGLYHFLAQFEQPSWRLWIQEIIS 352
             S  CP+C+A   +  H+ F+CP+   VW+       +   +  +   WIQ++I+
Sbjct: 550 SQSSLCPICNAFPETIEHVLFTCPWVVCVWFAHPFGIHVQCSQITTLDAWIQQLIN 605


>gb|EMJ12186.1| hypothetical protein PRUPE_ppa021345mg [Prunus persica]
          Length = 759

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
 Frame = +2

Query: 50  SSSSGPNPA-WKSLWKLNIPPRIKLFLWKCCTDTIATTDNLARRGIINSEPCPLCSAPEN 226
           SSS   +P  WK +WK ++PP+I+ FLW+   + +AT+ NL ++ I  S  CPLC+    
Sbjct: 430 SSSMTIDPRLWKQIWKADVPPKIRNFLWRALRNCLATSANLHKKKIARSPMCPLCNDHPE 489

Query: 227 SATHIFFSCPFASQVWYNAGLYHFLAQFEQPSWRLWIQEII 349
           +A HI   CP+   VW+   L   + +    S+  W+  +I
Sbjct: 490 TAEHILLLCPWVEPVWFRCSLNLRINRQAVTSFGQWLGNVI 530


>gb|EMJ00800.1| hypothetical protein PRUPE_ppa023095mg, partial [Prunus persica]
          Length = 933

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 33/101 (32%), Positives = 55/101 (54%)
 Frame = +2

Query: 47  ASSSSGPNPAWKSLWKLNIPPRIKLFLWKCCTDTIATTDNLARRGIINSEPCPLCSAPEN 226
           +SS +     WK +WK ++PP+I+ FLW+   + +AT+ NL ++ I  S  CPLC+    
Sbjct: 608 SSSMAIDQRLWKQIWKADVPPKIQNFLWRALRNCLATSANLHKKKIARSPMCPLCNDHPK 667

Query: 227 SATHIFFSCPFASQVWYNAGLYHFLAQFEQPSWRLWIQEII 349
           +A HI   CP+   VW+   L   + +    S+  W+  +I
Sbjct: 668 TAEHILLLCPWVEPVWFGCSLNLRINRQAVTSFGQWLGNVI 708


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 39/109 (35%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
 Frame = +2

Query: 59   SGPNPAWKSLWKLNIPPRIKLFLWKCCTDTIATTDNLARRGIINSEPCPLCSAPENSATH 238
            SG +  WK LWKL +P +IK FLW+ C +T+A   NL  RG+     C +C      A H
Sbjct: 1296 SGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAGH 1355

Query: 239  IFFSCPFASQVWYNAGLYHFLAQFE-QPSWRLWIQEIISSPRDAPTELI 382
            +FF C    +VW    L    +  E Q S +  +Q I   P +  T  I
Sbjct: 1356 LFFKCKPVKKVWQALNLEELRSMLEQQTSGKNVLQSIYCRPENERTSAI 1404


>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 39/109 (35%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
 Frame = +2

Query: 59   SGPNPAWKSLWKLNIPPRIKLFLWKCCTDTIATTDNLARRGIINSEPCPLCSAPENSATH 238
            SG +  WK LWKL +P +IK FLW+ C +T+A   NL  RG+     C +C      A H
Sbjct: 1241 SGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAGH 1300

Query: 239  IFFSCPFASQVWYNAGLYHFLAQFE-QPSWRLWIQEIISSPRDAPTELI 382
            +FF C    +VW    L    +  E Q S +  +Q I   P +  T  I
Sbjct: 1301 LFFKCKPVKKVWQALNLEELRSMLEQQTSGKNVLQSIYCRPENERTSAI 1349


>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1505

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 39/109 (35%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
 Frame = +2

Query: 59   SGPNPAWKSLWKLNIPPRIKLFLWKCCTDTIATTDNLARRGIINSEPCPLCSAPENSATH 238
            SG +  WK LWKL +P +IK FLW+ C +T+A   NL  RG+     C +C      A H
Sbjct: 1237 SGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAGH 1296

Query: 239  IFFSCPFASQVWYNAGLYHFLAQFE-QPSWRLWIQEIISSPRDAPTELI 382
            +FF C    +VW    L    +  E Q S +  +Q I   P +  T  I
Sbjct: 1297 LFFKCKPVKKVWQALNLEELRSMLEQQTSGKNVLQSIYCRPENERTSAI 1345


>ref|XP_004292479.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 473

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 36/115 (31%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
 Frame = +2

Query: 8   LNSVLSPLTDTEAASSSSGPNPAWKSLWKLNIPPRIKLF--LWKCCTDTIATTDNLARRG 181
           +NS    +   + +SS S     W+ LWK+  PP++  F  LWK  +  IAT  N+  R 
Sbjct: 227 INSKCRVINPPKCSSSHSVETAVWRQLWKIRAPPKVNFFFFLWKAISGAIATFKNMFIRK 286

Query: 182 IINSEPCPLCSAPENSATHIFFSCPFASQVWYNAGLYHFLAQFEQPSWRLWIQEI 346
           + ++  CP+C A E S  H+   CP+A  VW+ + L   + +    +   W++EI
Sbjct: 287 LASTPLCPICGAYEESNEHMLLLCPWAEAVWFGSSLGLKINKNHISTLDSWLKEI 341


>ref|XP_003621614.1| DNA-directed RNA polymerase III subunit RPC6 [Medicago truncatula]
           gi|355496629|gb|AES77832.1| DNA-directed RNA polymerase
           III subunit RPC6 [Medicago truncatula]
          Length = 456

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 30/71 (42%), Positives = 43/71 (60%)
 Frame = +2

Query: 77  WKSLWKLNIPPRIKLFLWKCCTDTIATTDNLARRGIINSEPCPLCSAPENSATHIFFSCP 256
           WK +WKL +P R++ F+WK   + I T  NL RRG++    CPLC   + S+ H F +CP
Sbjct: 260 WKLIWKLPLPTRVRNFMWKLARNIIPTRCNLRRRGVVLDTVCPLCFDADESSNHRFMACP 319

Query: 257 FASQVWYNAGL 289
              QVW+ + L
Sbjct: 320 MTLQVWFASPL 330


>gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japonica Group]
          Length = 639

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 39/109 (35%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
 Frame = +2

Query: 59  SGPNPAWKSLWKLNIPPRIKLFLWKCCTDTIATTDNLARRGIINSEPCPLCSAPENSATH 238
           SG +  WK LWKL +P +IK FLW+ C +T+A   NL  RG+     C +C      A H
Sbjct: 236 SGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLQHRGMDVDTRCVMCGRYNEDAGH 295

Query: 239 IFFSCPFASQVWYNAGLYHFLAQFE-QPSWRLWIQEIISSPRDAPTELI 382
           +FF C    +VW    L    +  E Q S +  +Q I   P    T  I
Sbjct: 296 LFFKCKPVKKVWQALNLEELRSMLEQQTSGKNVLQSIYCRPEIERTSAI 344


>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 39/109 (35%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
 Frame = +2

Query: 59   SGPNPAWKSLWKLNIPPRIKLFLWKCCTDTIATTDNLARRGIINSEPCPLCSAPENSATH 238
            SG +  WK LWKL +P +IK FLW+ C +T+A   NL  RG+     C +C      A H
Sbjct: 1269 SGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLQHRGMDVDTRCVMCGRYNEDAGH 1328

Query: 239  IFFSCPFASQVWYNAGLYHFLAQFE-QPSWRLWIQEIISSPRDAPTELI 382
            +FF C    +VW    L    +  E Q S +  +Q I   P    T  I
Sbjct: 1329 LFFKCKPVKKVWQALNLEELRSMLEQQTSGKNVLQSIYCRPEIERTSAI 1377


>gb|EEC81662.1| hypothetical protein OsI_25211 [Oryza sativa Indica Group]
          Length = 561

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 38/109 (34%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
 Frame = +2

Query: 59  SGPNPAWKSLWKLNIPPRIKLFLWKCCTDTIATTDNLARRGIINSEPCPLCSAPENSATH 238
           SG +  WK LWKL +P +IK FLW+ C +T+A   NL  RG+     C +C      A H
Sbjct: 236 SGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAGH 295

Query: 239 IFFSCPFASQVWYNAGLYHFLAQF-EQPSWRLWIQEIISSPRDAPTELI 382
           +FF C    +VW    L    +   +Q S +  +Q I   P +  T  I
Sbjct: 296 LFFKCKPVKKVWQALNLEELRSMLKQQTSGKNVLQSIYCRPENERTSAI 344


>gb|EEC84030.1| hypothetical protein OsI_30257 [Oryza sativa Indica Group]
          Length = 285

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 28/80 (35%), Positives = 46/80 (57%)
 Frame = +2

Query: 35  DTEAASSSSGPNPAWKSLWKLNIPPRIKLFLWKCCTDTIATTDNLARRGIINSEPCPLCS 214
           D  ++SS +G + AW +LWK N P ++K+F W+  T+++ T +N  +R +  S+ C +C 
Sbjct: 163 DDGSSSSGNGSSRAWNALWKCNAPQKVKIFAWRAITNSLTTLENKKKRKLEVSDICTICG 222

Query: 215 APENSATHIFFSCPFASQVW 274
                  H  F CP A Q+W
Sbjct: 223 VESEYVVHALFRCPHARQLW 242


>gb|EMJ20613.1| hypothetical protein PRUPE_ppa021915mg, partial [Prunus persica]
          Length = 509

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 31/71 (43%), Positives = 42/71 (59%)
 Frame = +2

Query: 77  WKSLWKLNIPPRIKLFLWKCCTDTIATTDNLARRGIINSEPCPLCSAPENSATHIFFSCP 256
           WK LWKL   P+IK F W+  ++ IAT  NL +R I  S  CP+C   E S  H+F  CP
Sbjct: 238 WKGLWKLKSLPKIKFFCWRILSNAIATKLNLFKRKISQSPMCPVCENNEESVEHLFLLCP 297

Query: 257 FASQVWYNAGL 289
           + + VW+ + L
Sbjct: 298 WTAAVWFGSPL 308


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 27/79 (34%), Positives = 44/79 (55%)
 Frame = +2

Query: 77   WKSLWKLNIPPRIKLFLWKCCTDTIATTDNLARRGIINSEPCPLCSAPENSATHIFFSCP 256
            W  LW LN+ P+++ FLW+ CT ++     L RR +I+   CP C+  + +  H+F+ CP
Sbjct: 1039 WNILWSLNVSPKVRHFLWRACTSSLPVRKVLQRRHLIDEAGCPCCAREDETQFHLFYRCP 1098

Query: 257  FASQVWYNAGLYHFLAQFE 313
             + ++W   G Y  L   E
Sbjct: 1099 MSLKLWEELGSYILLPGIE 1117


>gb|ABA91325.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 658

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
 Frame = +2

Query: 8   LNSVLSPLTDT---EAASSSSGPNPAWKSLWKLNIPPRIKLFLWKCCTDTIATTDNLARR 178
           LN+ L  LT     +  S    P+P WK +W    P +IKLF W    D ++T  NL ++
Sbjct: 518 LNNRLGNLTTKTIYDLRSPPGFPSPNWKFIWDCRTPLKIKLFAWLLVRDRLSTKLNLLKK 577

Query: 179 GIINSEPCPLCSAPENSATHIFFSCPFASQVW 274
            I+ +  C +CS  + +A H+ FSCPFA   W
Sbjct: 578 KIVQTATCDICSTTDETADHLSFSCPFAISFW 609


>ref|XP_002466618.1| hypothetical protein SORBIDRAFT_01g011130 [Sorghum bicolor]
           gi|241920472|gb|EER93616.1| hypothetical protein
           SORBIDRAFT_01g011130 [Sorghum bicolor]
          Length = 463

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 37/96 (38%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
 Frame = +2

Query: 41  EAASSSSGPNPAWKSLWKLNIPPRIKLFLWKCCTDTIATTDNLARRGIINSEPCPLCSAP 220
           +   S+ GP   WK +WKL+ P +IK FLW+   ++    DNL RRG+     CP+C+  
Sbjct: 130 QQGGSNPGPLSLWKRVWKLSCPNKIKHFLWRFLHNSHPLRDNLIRRGMEIVPRCPVCNQV 189

Query: 221 ENSATHIFFSCPFASQVWYNAGL---YHFLAQFEQP 319
                H+FF C  A QVW   GL      LA F  P
Sbjct: 190 GEDGGHLFFKCGMARQVWELLGLSTEREVLANFYTP 225


>gb|EEC72938.1| hypothetical protein OsI_06800 [Oryza sativa Indica Group]
          Length = 556

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 28/80 (35%), Positives = 45/80 (56%)
 Frame = +2

Query: 35  DTEAASSSSGPNPAWKSLWKLNIPPRIKLFLWKCCTDTIATTDNLARRGIINSEPCPLCS 214
           D  ++SS +G + AW +LWK N P ++K+F W+  T+++ T +N  +R +  S+ C +C 
Sbjct: 434 DEGSSSSGNGNSRAWNALWKCNAPQKVKIFAWRAITNSLPTLENKKKRKLEVSDICTICG 493

Query: 215 APENSATHIFFSCPFASQVW 274
                  H  F CP A Q W
Sbjct: 494 VESEYVVHALFRCPHARQFW 513