BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00030058
         (599 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004239184.1| PREDICTED: DNA polymerase alpha subunit B-li...   166   3e-51
ref|XP_006341754.1| PREDICTED: DNA polymerase alpha subunit B-li...   165   4e-50
gb|EPS73745.1| hypothetical protein M569_01012 [Genlisea aurea]       167   2e-39
ref|XP_006378282.1| DNA polymerase alpha subunit B family protei...   123   3e-31
ref|XP_004310044.1| PREDICTED: DNA polymerase alpha subunit B-li...   114   2e-30
ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus comm...   121   8e-30
gb|EOY00828.1| DNA polymerase alpha 2 [Theobroma cacao]               117   8e-30
gb|EMJ25471.1| hypothetical protein PRUPE_ppa018609mg [Prunus pe...   112   1e-27
ref|XP_004137446.1| PREDICTED: DNA polymerase alpha subunit B-li...   113   5e-27
ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [V...   122   7e-26
gb|AAG28895.1|AC008113_11 F12A21.24 [Arabidopsis thaliana]            114   5e-25
dbj|BAC43176.1| putative DNA polymerase alpha subunit [Arabidops...   114   5e-25
gb|AAG52305.1|AC011020_12 putative DNA polymerase alpha subunit ...   114   5e-25
ref|NP_176930.2| DNA polymerase alpha 2 [Arabidopsis thaliana] g...   114   5e-25
ref|XP_006484041.1| PREDICTED: DNA polymerase alpha subunit B-li...   119   6e-25
ref|XP_006438110.1| hypothetical protein CICLE_v10030973mg [Citr...   119   6e-25
ref|XP_006300633.1| hypothetical protein CARUB_v10019947mg, part...   115   1e-24
dbj|BAK05466.1| predicted protein [Hordeum vulgare subsp. vulgare]    110   1e-24
ref|XP_003578733.1| PREDICTED: DNA polymerase alpha subunit B-li...   110   3e-24
ref|XP_002888612.1| DNA polymerase alpha subunit B family [Arabi...   111   4e-24

>ref|XP_004239184.1| PREDICTED: DNA polymerase alpha subunit B-like [Solanum
           lycopersicum]
          Length = 617

 Score =  166 bits (421), Expect(2) = 3e-51
 Identities = 81/127 (63%), Positives = 102/127 (80%), Gaps = 1/127 (0%)
 Frame = +2

Query: 74  MEEEIKAEFTKSSFIFDDEEEILSKCLTFCIQYKLSASDLVSSWEAYSFTRGLESTVRSS 253
           MEEEIKAEF K+ F FDDE EIL+KCLTFCIQY LS SDLVSSW+ YS  RGL+ TV+SS
Sbjct: 1   MEEEIKAEFLKNGFSFDDETEILNKCLTFCIQYSLSPSDLVSSWDVYSLNRGLQLTVQSS 60

Query: 254 HMGAFLEQLQREQRDKVIGKDSGLHFYSNDVAMILNDNFEDTEG-ILDTPTDKRTLAHEK 430
           HMGAFL+QLQ E+R+ ++ K+ GLHFYS+D++M+LND +E+T+  IL TPTDKR  +  +
Sbjct: 61  HMGAFLQQLQNERREDIVKKEPGLHFYSSDISMMLNDEYENTKDIILGTPTDKRKTSQTE 120

Query: 431 PSDSAQK 451
              SA+K
Sbjct: 121 TIVSARK 127



 Score = 61.6 bits (148), Expect(2) = 3e-51
 Identities = 28/54 (51%), Positives = 39/54 (72%)
 Frame = +3

Query: 435 LIQHKKTNGSKFTFEKPLESVTPFGSRKNKFVVQAILNQHPSTQSIKVEEDSAN 596
           ++  +KTNGS  T  K LE++TPFG RKNKFVVQ  LN++ + +S+K+E D  N
Sbjct: 122 IVSARKTNGSISTSRKHLETITPFGQRKNKFVVQFTLNENANGESMKIENDEEN 175


>ref|XP_006341754.1| PREDICTED: DNA polymerase alpha subunit B-like [Solanum tuberosum]
          Length = 617

 Score =  165 bits (417), Expect(2) = 4e-50
 Identities = 81/127 (63%), Positives = 101/127 (79%), Gaps = 1/127 (0%)
 Frame = +2

Query: 74  MEEEIKAEFTKSSFIFDDEEEILSKCLTFCIQYKLSASDLVSSWEAYSFTRGLESTVRSS 253
           MEEEIKAEF K+ F  DDE EIL+KCLTFCIQY LS SDLVSSW+ YS  RGL+ TV+SS
Sbjct: 1   MEEEIKAEFLKNGFSLDDEAEILNKCLTFCIQYSLSPSDLVSSWDVYSLNRGLQLTVQSS 60

Query: 254 HMGAFLEQLQREQRDKVIGKDSGLHFYSNDVAMILNDNFEDT-EGILDTPTDKRTLAHEK 430
           HMGAFL+QLQ E+R+ ++ K+ GLHFYS+D++M+LND +E+T E IL TPTDKR  +  +
Sbjct: 61  HMGAFLQQLQNERREDIVKKEPGLHFYSSDISMMLNDEYENTKEIILGTPTDKRKTSQSE 120

Query: 431 PSDSAQK 451
              SA+K
Sbjct: 121 TIVSARK 127



 Score = 59.7 bits (143), Expect(2) = 4e-50
 Identities = 27/54 (50%), Positives = 39/54 (72%)
 Frame = +3

Query: 435 LIQHKKTNGSKFTFEKPLESVTPFGSRKNKFVVQAILNQHPSTQSIKVEEDSAN 596
           ++  +KTNGS  T  K LE++TPFG RK+KFVVQ  LN++ + +S+K+E D  N
Sbjct: 122 IVSARKTNGSISTSRKHLETITPFGQRKSKFVVQFTLNENANGESMKIENDEEN 175


>gb|EPS73745.1| hypothetical protein M569_01012 [Genlisea aurea]
          Length = 595

 Score =  167 bits (423), Expect = 2e-39
 Identities = 83/127 (65%), Positives = 96/127 (75%)
 Frame = +2

Query: 74  MEEEIKAEFTKSSFIFDDEEEILSKCLTFCIQYKLSASDLVSSWEAYSFTRGLESTVRSS 253
           MEEE+KAEF ++ F FDDEEEILSKCLTFCIQYKLSASDLVSSW+ YS  RGL+ TVRSS
Sbjct: 1   MEEELKAEFVRNGFSFDDEEEILSKCLTFCIQYKLSASDLVSSWDVYSINRGLDFTVRSS 60

Query: 254 HMGAFLEQLQREQRDKVIGKDSGLHFYSNDVAMILNDNFEDTEGILDTPTDKRTLAHEKP 433
           HM  FLE+L  EQ+DK+  K SGLH YSNDVAM+LN   ED E  L +P D+ T   +KP
Sbjct: 61  HMAPFLEELLNEQKDKLKEKQSGLHLYSNDVAMLLNVKNEDAEVTLGSPVDEITSPFDKP 120

Query: 434 SDSAQKN 454
            DS   +
Sbjct: 121 PDSVSSS 127


>ref|XP_006378282.1| DNA polymerase alpha subunit B family protein [Populus trichocarpa]
           gi|550329229|gb|ERP56079.1| DNA polymerase alpha subunit
           B family protein [Populus trichocarpa]
          Length = 618

 Score =  123 bits (309), Expect(2) = 3e-31
 Identities = 70/130 (53%), Positives = 86/130 (66%), Gaps = 3/130 (2%)
 Frame = +2

Query: 74  MEEEIKAEFTKSSFIFDDEEEILSKCLTFCIQYKLSASDLVSSWEAYSFTRGL-ESTVRS 250
           MEEEIK EF KS F  DDEEE+L KCLTFCI Y L  SDLVSSWE Y   R L ESTVR+
Sbjct: 1   MEEEIKEEFKKSGFSLDDEEEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRLLDESTVRN 60

Query: 251 SHMGAFLEQLQREQRDKVIGKDSGLHFYSN-DVAMILNDNFED-TEGILDTPTDKRTLAH 424
           + M  FL  LQ EQ++ V+ ++  L+ YS+ DV MILN + ED  E +  TPTDK    +
Sbjct: 61  AEMDGFLLHLQNEQKEAVVKEEPNLYIYSSKDVDMILNYDEEDLKEEVPGTPTDKSLKLN 120

Query: 425 EKPSDSAQKN 454
            +P +S  K+
Sbjct: 121 SEPFNSPPKS 130



 Score = 38.1 bits (87), Expect(2) = 3e-31
 Identities = 19/49 (38%), Positives = 29/49 (59%)
 Frame = +3

Query: 450 KTNGSKFTFEKPLESVTPFGSRKNKFVVQAILNQHPSTQSIKVEEDSAN 596
           K+ G+ ++  KP + VTPFG R +KFVV+  +N  P  ++   E D  N
Sbjct: 129 KSYGNGYSSGKPSKLVTPFGRRTDKFVVKFNINSLPVVENNDGEHDHGN 177


>ref|XP_004310044.1| PREDICTED: DNA polymerase alpha subunit B-like [Fragaria vesca
           subsp. vesca]
          Length = 620

 Score =  114 bits (284), Expect(2) = 2e-30
 Identities = 66/127 (51%), Positives = 80/127 (62%), Gaps = 4/127 (3%)
 Frame = +2

Query: 74  MEEEIKAEFTKSSFIFDDEEEILSKCLTFCIQYKLSASDLVSSWEAYSFTRGL-ESTVRS 250
           ME++IKAEF KS F  D E+EIL KCLTFCI YKL+ SDLVSSWE Y   R L E  VR 
Sbjct: 1   MEDQIKAEFIKSDFTLDQEDEILKKCLTFCINYKLTPSDLVSSWEIYYLNRQLNEPVVRD 60

Query: 251 SHMGAFLEQLQREQRDKVIGKDS-GLHFY-SNDVAMILN-DNFEDTEGILDTPTDKRTLA 421
             M  FL+ LQ EQ++ +  K+  GLH Y SNDV MILN ++ +  E +L TP  K    
Sbjct: 61  VEMEGFLQHLQNEQKEAINSKEEPGLHIYSSNDVDMILNGEDVDIEETVLHTPISKSQNR 120

Query: 422 HEKPSDS 442
           +    DS
Sbjct: 121 YSDSFDS 127



 Score = 44.7 bits (104), Expect(2) = 2e-30
 Identities = 19/49 (38%), Positives = 34/49 (69%)
 Frame = +3

Query: 450 KTNGSKFTFEKPLESVTPFGSRKNKFVVQAILNQHPSTQSIKVEEDSAN 596
           +TNG+  +  KP + +TPFG R +KFVV+  +   P+T+++K E+++ N
Sbjct: 130 QTNGNVPSSGKPTKLITPFGRRTDKFVVKFSIENMPNTENVKKEDENEN 178


>ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus communis]
           gi|223546049|gb|EEF47552.1| alpha DNA polymerase,
           putative [Ricinus communis]
          Length = 621

 Score =  121 bits (304), Expect(2) = 8e-30
 Identities = 71/131 (54%), Positives = 85/131 (64%), Gaps = 4/131 (3%)
 Frame = +2

Query: 74  MEEEIKAEFTKSSFIFDDEEE-ILSKCLTFCIQYKLSASDLVSSWEAYSFTRGL-ESTVR 247
           MEEEIKAEF KS F  D EEE IL KCLTFCI Y L  +DLVSSWE Y   R L ESTV+
Sbjct: 1   MEEEIKAEFNKSGFTLDHEEEQILKKCLTFCINYNLKPADLVSSWEVYYLNRQLDESTVQ 60

Query: 248 SSHMGAFLEQLQREQRDKVIGKDSGLHFYSN-DVAMILNDNFED-TEGILDTPTDKRTLA 421
           +  M  FL  LQ EQ++ +I ++  LH YS+ DV MILND  ED  E +  TPTD+    
Sbjct: 61  NGEMDGFLLHLQNEQKEAIIKEEPDLHIYSSKDVDMILNDEGEDLKEEVPGTPTDESQKL 120

Query: 422 HEKPSDSAQKN 454
           + +P DS  K+
Sbjct: 121 NSEPFDSIIKS 131



 Score = 35.0 bits (79), Expect(2) = 8e-30
 Identities = 16/40 (40%), Positives = 26/40 (65%)
 Frame = +3

Query: 450 KTNGSKFTFEKPLESVTPFGSRKNKFVVQAILNQHPSTQS 569
           K+ G+ ++  K  + VTPFG R +KFVV+  +N  P T++
Sbjct: 130 KSTGNGYSSGKRSKHVTPFGRRTDKFVVKFNINNLPDTEN 169


>gb|EOY00828.1| DNA polymerase alpha 2 [Theobroma cacao]
          Length = 621

 Score =  117 bits (292), Expect(2) = 8e-30
 Identities = 69/129 (53%), Positives = 80/129 (62%), Gaps = 3/129 (2%)
 Frame = +2

Query: 74  MEEEIKAEFTKSSFIFDDEEEILSKCLTFCIQYKLSASDLVSSWEAYSFTRGL-ESTVRS 250
           MEEEIKAEF K+ F  D+EEEIL KC  FC+ + L  SDLVSSWE Y   R L ES V+ 
Sbjct: 1   MEEEIKAEFLKNGFTLDEEEEILKKCHMFCLNFSLKPSDLVSSWEVYYLNRQLDESVVKD 60

Query: 251 SHMGAFLEQLQREQRDKVIGKDSGLHFYS-NDVAMILNDNFEDT-EGILDTPTDKRTLAH 424
           + M  F   LQ EQ + V+ K+  L+ YS  DV MIL+   EDT E IL TPTDK    H
Sbjct: 61  AEMDGFSGHLQNEQVEAVVKKEPDLYMYSFKDVDMILDAEDEDTKEVILRTPTDKSEKLH 120

Query: 425 EKPSDSAQK 451
               DSAQK
Sbjct: 121 SDLYDSAQK 129



 Score = 39.7 bits (91), Expect(2) = 8e-30
 Identities = 17/50 (34%), Positives = 32/50 (64%)
 Frame = +3

Query: 447 KKTNGSKFTFEKPLESVTPFGSRKNKFVVQAILNQHPSTQSIKVEEDSAN 596
           +KTN + ++  +  + VTPFG+R NKFVV+  ++  P+++++    D  N
Sbjct: 128 QKTNSNIYSSRRTPKQVTPFGTRSNKFVVKFNIDNLPTSETVNGMHDHEN 177


>gb|EMJ25471.1| hypothetical protein PRUPE_ppa018609mg [Prunus persica]
          Length = 612

 Score =  112 bits (279), Expect(2) = 1e-27
 Identities = 65/127 (51%), Positives = 81/127 (63%), Gaps = 4/127 (3%)
 Frame = +2

Query: 74  MEEEIKAEFTKSSFIFDDEEEILSKCLTFCIQYKLSASDLVSSWEAYSFTRGLEST-VRS 250
           ME+EIKAEF  S FIFD E+EIL KC TFCI +KL+ +DLVSSWE Y   R +  T V  
Sbjct: 1   MEDEIKAEFNNSGFIFDKEKEILQKCSTFCINFKLTPTDLVSSWEIYYLNRQINGTVVED 60

Query: 251 SHMGAFLEQLQREQRDKVIGKDSGLHFYSN-DVAMILNDNFED-TEGILDTPTDKRTLAH 424
           + M  FL  LQ +Q+  +  K+  LH YS+ DV MILND  ED  E +L TP   ++  H
Sbjct: 61  AEMDGFLGYLQSQQKVAIDEKELDLHIYSSRDVDMILNDEDEDIREDVLGTPPPFKSQNH 120

Query: 425 -EKPSDS 442
             +PSDS
Sbjct: 121 YSEPSDS 127



 Score = 37.4 bits (85), Expect(2) = 1e-27
 Identities = 16/39 (41%), Positives = 26/39 (66%)
 Frame = +3

Query: 480 KPLESVTPFGSRKNKFVVQAILNQHPSTQSIKVEEDSAN 596
           KP +  TPFG R +K VV+  +N  P+T++ + E+D+ N
Sbjct: 139 KPSKLATPFGRRTDKLVVKFSINNKPNTENREKEDDNEN 177


>ref|XP_004137446.1| PREDICTED: DNA polymerase alpha subunit B-like [Cucumis sativus]
           gi|449486914|ref|XP_004157440.1| PREDICTED: DNA
           polymerase alpha subunit B-like [Cucumis sativus]
          Length = 622

 Score =  113 bits (282), Expect(2) = 5e-27
 Identities = 63/125 (50%), Positives = 78/125 (62%), Gaps = 3/125 (2%)
 Frame = +2

Query: 74  MEEEIKAEFTKSSFIFDDEEEILSKCLTFCIQYKLSASDLVSSWEAYSFTRGLE-STVRS 250
           MEEEI  EF +S F FD+EEEIL KC+TFC+ Y L  SD+VSSWE Y   R L+ S V  
Sbjct: 1   MEEEIGEEFKRSGFTFDEEEEILKKCVTFCVNYNLKPSDIVSSWEVYYLNRLLDGSVVEL 60

Query: 251 SHMGAFLEQLQREQRDKVIGKDSGLHFYSN-DVAMILNDNFED-TEGILDTPTDKRTLAH 424
             +  FL+ LQ EQ++ VI  +  LH YS+ DV +ILND  ED  E IL TP  K    H
Sbjct: 61  EQLDGFLQHLQNEQKETVIKGEPDLHVYSSKDVDVILNDENEDLNEDILKTPNGKSQSLH 120

Query: 425 EKPSD 439
           ++  D
Sbjct: 121 KERLD 125



 Score = 34.3 bits (77), Expect(2) = 5e-27
 Identities = 18/48 (37%), Positives = 25/48 (52%)
 Frame = +3

Query: 453 TNGSKFTFEKPLESVTPFGSRKNKFVVQAILNQHPSTQSIKVEEDSAN 596
           TN   F+  KP +  TPFG R  KFVV+  +N  P   +    ++S N
Sbjct: 130 TNEGLFSSGKPSKHETPFGQRTEKFVVRFNINNMPDMVTAVKVDNSEN 177


>ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [Vitis vinifera]
           gi|297738371|emb|CBI27572.3| unnamed protein product
           [Vitis vinifera]
          Length = 623

 Score =  122 bits (306), Expect = 7e-26
 Identities = 74/143 (51%), Positives = 89/143 (62%), Gaps = 5/143 (3%)
 Frame = +2

Query: 74  MEEEIKAEFTKSSFIF--DDEEEILSKCLTFCIQYKLSASDLVSSWEAYSFTRGL-ESTV 244
           MEEEI  EF K  F F  ++EEE+L KCLTFCI YKLS SDLVSSWE Y   R L ES V
Sbjct: 1   MEEEIMLEFKKIGFSFHKEEEEEVLKKCLTFCINYKLSPSDLVSSWEVYYLNRQLDESVV 60

Query: 245 RSSHMGAFLEQLQREQRDKVIGKDSGLHFY-SNDVAMILNDNFED-TEGILDTPTDKRTL 418
            ++ M  FL  LQ EQ++ VI ++  LH Y SNDV MIL+D  E+  E IL TP+D+   
Sbjct: 61  GNALMDGFLLHLQNEQKEAVIKEEPHLHIYSSNDVDMILSDEHEEIKEDILGTPSDRSGR 120

Query: 419 AHEKPSDSAQKNKWQQVYF*KTS 487
            H  P DSAQ+       + K S
Sbjct: 121 HHADPFDSAQRTNGNSSSYGKPS 143


>gb|AAG28895.1|AC008113_11 F12A21.24 [Arabidopsis thaliana]
          Length = 803

 Score =  114 bits (285), Expect(2) = 5e-25
 Identities = 61/130 (46%), Positives = 84/130 (64%), Gaps = 3/130 (2%)
 Frame = +2

Query: 77  EEEIKAEFTKSSFIFDDEEEILSKCLTFCIQYKLSASDLVSSWEAYSFTRG-LESTVRSS 253
           +EEIK EF +S FI  +E+EIL +C+T CI Y L  SDLVSSWE Y   R  L+ TV+  
Sbjct: 4   DEEIKNEFKRSGFILVEEDEILKRCVTLCINYSLKPSDLVSSWELYHLNRQLLDQTVKKD 63

Query: 254 HMGAFLEQLQREQRDKVIG-KDSGLHFYSN-DVAMILNDNFEDTEGILDTPTDKRTLAHE 427
            M  F+  LQ EQ++ ++  +++GLH YSN DV M+L+   EDTE I+ TPT+K    H 
Sbjct: 64  DMDGFVLHLQNEQKESIMRVEEAGLHLYSNRDVDMLLDGVQEDTEEIVTTPTNKSQRLHP 123

Query: 428 KPSDSAQKNK 457
            P DS  +++
Sbjct: 124 DPFDSISRSR 133



 Score = 26.2 bits (56), Expect(2) = 5e-25
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +3

Query: 480 KPLESVTPFGSRKNKFVVQ 536
           K +  VTPFGSR  KFVV+
Sbjct: 141 KSVGHVTPFGSRIEKFVVK 159


>dbj|BAC43176.1| putative DNA polymerase alpha subunit [Arabidopsis thaliana]
           gi|29028994|gb|AAO64876.1| At1g67630 [Arabidopsis
           thaliana]
          Length = 620

 Score =  114 bits (285), Expect(2) = 5e-25
 Identities = 61/130 (46%), Positives = 84/130 (64%), Gaps = 3/130 (2%)
 Frame = +2

Query: 77  EEEIKAEFTKSSFIFDDEEEILSKCLTFCIQYKLSASDLVSSWEAYSFTRG-LESTVRSS 253
           +EEIK EF +S FI  +E+EIL +C+T CI Y L  SDLVSSWE Y   R  L+ TV+  
Sbjct: 4   DEEIKNEFKRSGFILVEEDEILKRCVTLCINYSLKPSDLVSSWELYHLNRQLLDQTVKKD 63

Query: 254 HMGAFLEQLQREQRDKVIG-KDSGLHFYSN-DVAMILNDNFEDTEGILDTPTDKRTLAHE 427
            M  F+  LQ EQ++ ++  +++GLH YSN DV M+L+   EDTE I+ TPT+K    H 
Sbjct: 64  DMDGFVLHLQNEQKESIMRVEEAGLHLYSNRDVDMLLDGVQEDTEEIVTTPTNKSQRLHP 123

Query: 428 KPSDSAQKNK 457
            P DS  +++
Sbjct: 124 DPFDSISRSR 133



 Score = 26.2 bits (56), Expect(2) = 5e-25
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +3

Query: 480 KPLESVTPFGSRKNKFVVQ 536
           K +  VTPFGSR  KFVV+
Sbjct: 141 KSVGHVTPFGSRIEKFVVK 159


>gb|AAG52305.1|AC011020_12 putative DNA polymerase alpha subunit [Arabidopsis thaliana]
          Length = 620

 Score =  114 bits (285), Expect(2) = 5e-25
 Identities = 61/130 (46%), Positives = 84/130 (64%), Gaps = 3/130 (2%)
 Frame = +2

Query: 77  EEEIKAEFTKSSFIFDDEEEILSKCLTFCIQYKLSASDLVSSWEAYSFTRG-LESTVRSS 253
           +EEIK EF +S FI  +E+EIL +C+T CI Y L  SDLVSSWE Y   R  L+ TV+  
Sbjct: 4   DEEIKNEFKRSGFILVEEDEILKRCVTLCINYSLKPSDLVSSWELYHLNRQLLDQTVKKD 63

Query: 254 HMGAFLEQLQREQRDKVIG-KDSGLHFYSN-DVAMILNDNFEDTEGILDTPTDKRTLAHE 427
            M  F+  LQ EQ++ ++  +++GLH YSN DV M+L+   EDTE I+ TPT+K    H 
Sbjct: 64  DMDGFVLHLQNEQKESIMRVEEAGLHLYSNRDVDMLLDGVQEDTEEIVTTPTNKSQRLHP 123

Query: 428 KPSDSAQKNK 457
            P DS  +++
Sbjct: 124 DPFDSISRSR 133



 Score = 26.2 bits (56), Expect(2) = 5e-25
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +3

Query: 480 KPLESVTPFGSRKNKFVVQ 536
           K +  VTPFGSR  KFVV+
Sbjct: 141 KSVGHVTPFGSRIEKFVVK 159


>ref|NP_176930.2| DNA polymerase alpha 2 [Arabidopsis thaliana]
           gi|332196552|gb|AEE34673.1| DNA polymerase alpha 2
           [Arabidopsis thaliana]
          Length = 620

 Score =  114 bits (285), Expect(2) = 5e-25
 Identities = 61/130 (46%), Positives = 84/130 (64%), Gaps = 3/130 (2%)
 Frame = +2

Query: 77  EEEIKAEFTKSSFIFDDEEEILSKCLTFCIQYKLSASDLVSSWEAYSFTRG-LESTVRSS 253
           +EEIK EF +S FI  +E+EIL +C+T CI Y L  SDLVSSWE Y   R  L+ TV+  
Sbjct: 4   DEEIKNEFKRSGFILVEEDEILKRCVTLCINYSLKPSDLVSSWELYHLNRQLLDQTVKKD 63

Query: 254 HMGAFLEQLQREQRDKVIG-KDSGLHFYSN-DVAMILNDNFEDTEGILDTPTDKRTLAHE 427
            M  F+  LQ EQ++ ++  +++GLH YSN DV M+L+   EDTE I+ TPT+K    H 
Sbjct: 64  DMDGFVLHLQNEQKESIMRVEEAGLHLYSNRDVDMLLDGVQEDTEEIVTTPTNKSQRLHP 123

Query: 428 KPSDSAQKNK 457
            P DS  +++
Sbjct: 124 DPFDSISRSR 133



 Score = 26.2 bits (56), Expect(2) = 5e-25
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +3

Query: 480 KPLESVTPFGSRKNKFVVQ 536
           K +  VTPFGSR  KFVV+
Sbjct: 141 KSVGHVTPFGSRIEKFVVK 159


>ref|XP_006484041.1| PREDICTED: DNA polymerase alpha subunit B-like [Citrus sinensis]
          Length = 620

 Score =  119 bits (298), Expect = 6e-25
 Identities = 73/154 (47%), Positives = 92/154 (59%), Gaps = 3/154 (1%)
 Frame = +2

Query: 74  MEEEIKAEFTKSSFIFDDEEEILSKCLTFCIQYKLSASDLVSSWEAYSFTRGL-ESTVRS 250
           MEEEIKAEF K+ F F DE E+L KCLTFCI Y L  SDLVSSWE Y   R L ESTV+ 
Sbjct: 1   MEEEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKD 60

Query: 251 SHMGAFLEQLQREQRDKVIGKDSGLHFYSN-DVAMILNDNFED-TEGILDTPTDKRTLAH 424
             M  F+  LQ EQ++ +I ++  LH YS+ DV MILN+  E+  E IL TPTD   L +
Sbjct: 61  DEMDGFMLHLQNEQKEAIIKEEPSLHIYSSKDVDMILNNEDENIAEDILGTPTDNLKL-Y 119

Query: 425 EKPSDSAQKNKWQQVYF*KTSRISDTFWVKKEQV 526
               DS  K         K S+++  F  + E++
Sbjct: 120 SDALDSTYKANANGYSSDKPSKLATPFGRRTEKL 153


>ref|XP_006438110.1| hypothetical protein CICLE_v10030973mg [Citrus clementina]
           gi|557540306|gb|ESR51350.1| hypothetical protein
           CICLE_v10030973mg [Citrus clementina]
          Length = 620

 Score =  119 bits (298), Expect = 6e-25
 Identities = 73/154 (47%), Positives = 92/154 (59%), Gaps = 3/154 (1%)
 Frame = +2

Query: 74  MEEEIKAEFTKSSFIFDDEEEILSKCLTFCIQYKLSASDLVSSWEAYSFTRGL-ESTVRS 250
           MEEEIKAEF K+ F F DE E+L KCLTFCI Y L  SDLVSSWE Y   R L ESTV+ 
Sbjct: 1   MEEEIKAEFQKNGFNFVDEGEVLKKCLTFCINYNLKPSDLVSSWEVYYLNRQLDESTVKD 60

Query: 251 SHMGAFLEQLQREQRDKVIGKDSGLHFYSN-DVAMILNDNFED-TEGILDTPTDKRTLAH 424
             M  F+  LQ EQ++ +I ++  LH YS+ DV MILN+  E+  E IL TPTD   L +
Sbjct: 61  DEMDGFMLHLQNEQKEAIIKEEPSLHIYSSKDVDMILNNEDENIAEDILGTPTDNLKL-Y 119

Query: 425 EKPSDSAQKNKWQQVYF*KTSRISDTFWVKKEQV 526
               DS  K         K S+++  F  + E++
Sbjct: 120 SDALDSTYKANANGYSSDKPSKLATPFGRRTEKL 153


>ref|XP_006300633.1| hypothetical protein CARUB_v10019947mg, partial [Capsella rubella]
           gi|482569343|gb|EOA33531.1| hypothetical protein
           CARUB_v10019947mg, partial [Capsella rubella]
          Length = 639

 Score =  115 bits (287), Expect(2) = 1e-24
 Identities = 62/135 (45%), Positives = 84/135 (62%), Gaps = 3/135 (2%)
 Frame = +2

Query: 62  RSRKMEEEIKAEFTKSSFIFDDEEEILSKCLTFCIQYKLSASDLVSSWEAYSFTRG-LES 238
           R+   +EEIK EF +S F   +E+EIL KC+T CI Y L  SDLVSSWE Y   R  L+ 
Sbjct: 18  RAMATDEEIKNEFKRSGFTLVEEDEILQKCVTLCINYSLKPSDLVSSWELYHLNRQLLDQ 77

Query: 239 TVRSSHMGAFLEQLQREQRDKVIGKD-SGLHFYSN-DVAMILNDNFEDTEGILDTPTDKR 412
           TV+   M  F+  LQ EQ++ ++ ++ SGLH YSN D+ M+L+   EDT  I+ TPT+K 
Sbjct: 78  TVKKDEMDGFVLHLQNEQKESIMREEASGLHLYSNRDIDMLLDKVHEDTGEIVTTPTNKS 137

Query: 413 TLAHEKPSDSAQKNK 457
              H  P DS  ++K
Sbjct: 138 QRLHPDPFDSISRSK 152



 Score = 24.3 bits (51), Expect(2) = 1e-24
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 480 KPLESVTPFGSRKNKFVVQ 536
           K +  VTPFG R  KFVV+
Sbjct: 160 KSVGHVTPFGRRIEKFVVK 178


>dbj|BAK05466.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 625

 Score =  110 bits (274), Expect(2) = 1e-24
 Identities = 60/130 (46%), Positives = 83/130 (63%), Gaps = 7/130 (5%)
 Frame = +2

Query: 74  MEEEIKAEFTKSSFIFD-----DEEEILSKCLTFCIQYKLSASDLVSSWEAYSFTRGLES 238
           MEEEI+AEF  + FI       D  +ILS  LT+C+ YK+S +DLVS+WE Y   R L+ 
Sbjct: 1   MEEEIRAEFQSNGFIIGGAGPADSAQILSTLLTYCVNYKMSPADLVSNWEVYYLNRQLDG 60

Query: 239 -TVRSSHMGAFLEQLQREQRDKVIGKDSGLHFY-SNDVAMILNDNFEDTEGILDTPTDKR 412
             V SS++  FL  LQ E ++K+I +++ LH Y SNDV M+L++   D EGILDTP+ K+
Sbjct: 61  LKVESSYLDGFLSHLQNEVKEKLIKEETDLHIYSSNDVDMLLSNTHTDEEGILDTPSTKQ 120

Query: 413 TLAHEKPSDS 442
              H   S+S
Sbjct: 121 EKPHVDSSNS 130



 Score = 29.3 bits (64), Expect(2) = 1e-24
 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
 Frame = +3

Query: 426 RSHLIQHKKTNGSKFTFEKPLESVTPFGSRKNKFVVQAILNQH-----PSTQSIKVEED 587
           R   I+  KTNG +         +TPF  R NKF    +LN       PS   ++  ED
Sbjct: 139 RPSSIRAAKTNGDR---------ITPFAQRVNKFTQHYVLNADNVASVPSKDEVETSED 188


>ref|XP_003578733.1| PREDICTED: DNA polymerase alpha subunit B-like [Brachypodium
           distachyon]
          Length = 625

 Score =  110 bits (275), Expect(2) = 3e-24
 Identities = 60/130 (46%), Positives = 82/130 (63%), Gaps = 7/130 (5%)
 Frame = +2

Query: 74  MEEEIKAEFTKSSFIF-----DDEEEILSKCLTFCIQYKLSASDLVSSWEAYSFTRGLES 238
           MEEEI+ EF  S F        D  +ILS  LT+CI YK+S +DLVS+WE Y   R L+ 
Sbjct: 1   MEEEIRTEFESSGFSIGGAGPSDSAQILSTLLTYCINYKMSPADLVSNWEVYYLNRQLDG 60

Query: 239 -TVRSSHMGAFLEQLQREQRDKVIGKDSGLHFY-SNDVAMILNDNFEDTEGILDTPTDKR 412
             V SS++  FL  LQ E +DK+I +++ LH Y SND+ M+LN+   + EG LDTP+ K 
Sbjct: 61  LKVESSYLDGFLTHLQNEVKDKLIKEETDLHVYSSNDIDMLLNNALTEEEGFLDTPSTKL 120

Query: 413 TLAHEKPSDS 442
             +H +PS+S
Sbjct: 121 EKSHGEPSNS 130



 Score = 27.7 bits (60), Expect(2) = 3e-24
 Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
 Frame = +3

Query: 450 KTNGSKFTFEKPLESVTPFGSRKNKFVVQAILNQH-----PSTQSIKVEED 587
           KTNG +         +TPF  R NKF    +LN       PS   ++  ED
Sbjct: 147 KTNGDR---------ITPFAQRVNKFAQHYVLNADDMANVPSKPEVETSED 188


>ref|XP_002888612.1| DNA polymerase alpha subunit B family [Arabidopsis lyrata subsp.
           lyrata] gi|297334453|gb|EFH64871.1| DNA polymerase alpha
           subunit B family [Arabidopsis lyrata subsp. lyrata]
          Length = 619

 Score =  111 bits (277), Expect(2) = 4e-24
 Identities = 58/130 (44%), Positives = 84/130 (64%), Gaps = 3/130 (2%)
 Frame = +2

Query: 77  EEEIKAEFTKSSFIFDDEEEILSKCLTFCIQYKLSASDLVSSWEAYSFTRG-LESTVRSS 253
           +EEIK EF +S F   +E++IL +C+T CI Y L+ SDLVSSWE Y   R  L+ TV+  
Sbjct: 4   DEEIKNEFKRSGFTLVEEDDILKRCVTLCINYSLNPSDLVSSWELYHLNRQLLDQTVKKD 63

Query: 254 HMGAFLEQLQREQRDKVI-GKDSGLHFYSN-DVAMILNDNFEDTEGILDTPTDKRTLAHE 427
            M  F+  LQ EQ++ ++  +++GLH YSN DV M+L+   EDTE I+ TPT++    H 
Sbjct: 64  EMDGFVLHLQNEQKESIMRAEEAGLHLYSNRDVDMLLDGVQEDTEEIVTTPTNESQRLHP 123

Query: 428 KPSDSAQKNK 457
            P DS  +++
Sbjct: 124 DPFDSISRSR 133



 Score = 26.2 bits (56), Expect(2) = 4e-24
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +3

Query: 480 KPLESVTPFGSRKNKFVVQ 536
           K +  VTPFGSR  KFVV+
Sbjct: 141 KSVGHVTPFGSRIEKFVVK 159