BLASTX nr result

ID: Rehmannia23_contig00029384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00029384
         (352 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004231582.1| PREDICTED: ATP synthase mitochondrial F1 com...    60   4e-07
ref|XP_006356890.1| PREDICTED: ATP synthase mitochondrial F1 com...    58   1e-06

>ref|XP_004231582.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           1-like [Solanum lycopersicum]
          Length = 252

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 30/75 (40%), Positives = 43/75 (57%)
 Frame = -3

Query: 227 MHHLITKVSRRVFSSVGSLCRNACTSMVTKHYFSTIPALQRQFESTQKVAVPSNLLKWGS 48
           MHHL + VS+R+ SS  +  RN  +  V          LQ+  + + + A+PS+ LKW S
Sbjct: 2   MHHLSSSVSKRILSSAMAFYRNRSSFSVVSRQAYRSSTLQQIVDKSPRHAIPSDFLKWRS 61

Query: 47  LGSCRTLSFATGFAP 3
           LG  RT  FA+GF+P
Sbjct: 62  LGCIRTSKFASGFSP 76


>ref|XP_006356890.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           1-like isoform X1 [Solanum tuberosum]
           gi|565381041|ref|XP_006356891.1| PREDICTED: ATP synthase
           mitochondrial F1 complex assembly factor 1-like isoform
           X2 [Solanum tuberosum] gi|565381043|ref|XP_006356892.1|
           PREDICTED: ATP synthase mitochondrial F1 complex
           assembly factor 1-like isoform X3 [Solanum tuberosum]
          Length = 252

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
 Frame = -3

Query: 227 MHHLITKVSRRVFSSVGSLCRNACT-SMVTKHYFSTIPALQRQFESTQKVAVPSNLLKWG 51
           MHHL + VS+R+ SS  +  RN  + SMV++  + +   LQ+  + + + A+PS+ LKW 
Sbjct: 2   MHHLSSSVSKRILSSAMAFYRNGSSFSMVSRQAYRS-STLQQIVDKSPRNAIPSDFLKWR 60

Query: 50  SLGSCRTLSFATGFAP 3
            LG  RT  FA+GF+P
Sbjct: 61  LLGCIRTSKFASGFSP 76


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