BLASTX nr result

ID: Rehmannia23_contig00029149 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00029149
         (526 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004233113.1| PREDICTED: uncharacterized protein LOC101245...    62   6e-08
ref|XP_006365575.1| PREDICTED: F-box/kelch-repeat protein At3g23...    60   4e-07
gb|EOY33369.1| F-box and associated interaction domains-containi...    57   3e-06

>ref|XP_004233113.1| PREDICTED: uncharacterized protein LOC101245022 [Solanum
           lycopersicum]
          Length = 241

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
 Frame = +3

Query: 135 LDVWMFDDDEQIWRKNYSFGPIEVKVDRILQCSKNGKILGERPNDKLFVFDPETGCVKKV 314
           +DVW+ DD +  W K YS GP+ V  DRIL C +NG I+ +  N  +F+ DP T  VK+ 
Sbjct: 123 MDVWVMDDVDG-WSKKYSVGPL-VGFDRILGCLRNGDIVVKNENGVIFICDPITNSVKEN 180

Query: 315 W-LYGSQHLSFEIYGYTESLVYIKGMKEV 398
           + +  S+  S+ +  Y+ESL  I GM  V
Sbjct: 181 FSIDNSKDESYVVVDYSESLFLIGGMLPV 209


>ref|XP_006365575.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like, partial
           [Solanum tuberosum]
          Length = 409

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
 Frame = +3

Query: 135 LDVWMFDDDEQIWRKNYSFGPIEVKVDRILQCSKNGKILGERPNDKLFVFDPETGCVKKV 314
           +DVW+ DD +  W K YS GP+ V  D IL C +NG I+ +  N  +F+ DP T  +K+ 
Sbjct: 308 MDVWVMDDVDG-WSKKYSVGPL-VGFDLILGCLRNGDIVAKNENGVIFLCDPITSSIKEK 365

Query: 315 WLY-GSQHLSFEIYGYTESLVYIKGMKEV 398
           + +  ++  S+ I  Y+ESL  I GM  V
Sbjct: 366 FSFDNNKDGSYVIVDYSESLFLIGGMLPV 394


>gb|EOY33369.1| F-box and associated interaction domains-containing protein,
           putative isoform 1 [Theobroma cacao]
           gi|508786114|gb|EOY33370.1| F-box and associated
           interaction domains-containing protein, putative isoform
           1 [Theobroma cacao]
          Length = 387

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 38/113 (33%), Positives = 62/113 (54%)
 Frame = +3

Query: 57  QLVDWNGSLAALVCTVEKEVGSWVESLDVWMFDDDEQIWRKNYSFGPIEVKVDRILQCSK 236
           QL+D+NGSL A+V   E       +S+D+W+ +     W + +S   +   V+R L   K
Sbjct: 267 QLLDFNGSLGAIVYPRE----GTEKSIDLWVMNGS---WTRQFSIESVS-GVERPLGFWK 318

Query: 237 NGKILGERPNDKLFVFDPETGCVKKVWLYGSQHLSFEIYGYTESLVYIKGMKE 395
           NG++  E  N +L +FDP T  +K + ++  Q+ + ++  Y ESLV I G  E
Sbjct: 319 NGELFLESSNHELVLFDPATRELKNLGIHAYQN-TMQLIAYVESLVPINGRSE 370


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