BLASTX nr result
ID: Rehmannia23_contig00029131
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00029131
(346 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AGQ49469.1| reverse transcriptase [Dahlia mosaic virus] 97 2e-18
gb|AEA39176.1| polyprotein [Dahlia mosaic virus] 96 5e-18
gb|AEB54984.1| polyprotein [Dahlia mosaic virus D10] 96 6e-18
gb|ABW80581.1| polyprotein [Dahlia mosaic virus] 96 6e-18
ref|NP_659397.1| hypothetical protein [Mirabilis mosaic virus] g... 94 1e-17
gb|AEL30041.1| polymerase polyprotein [Dahlia common mosaic virus] 93 3e-17
gb|ABW81763.1| reverse transcriptase [Dahlia mosaic virus-Holland] 93 3e-17
gb|ADZ44590.1| polyprotein [Dahlia mosaic virus] 92 5e-17
gb|AGT41978.1| reverse transcriptase [Dahlia mosaic virus] 91 2e-16
ref|NP_619548.1| Enzymatic polyprotein [Contains: Aspartic prote... 88 1e-15
ref|NP_612577.1| Enzymatic polyprotein [Contains: Aspartic prote... 88 1e-15
emb|CCG14716.1| ORF V protein [Strawberry vein banding virus] 88 1e-15
ref|NP_043933.1| hypothetical protein [Strawberry vein banding v... 87 2e-15
ref|YP_001931967.1| replicase [Eupatorium vein clearing virus] g... 85 1e-14
emb|CAH68829.1| polyprotein [Carnation etched ring virus] 84 3e-14
gb|AGT42182.1| reverse transcriptase [Cauliflower mosaic virus] 83 3e-14
gb|AGT42056.1| reverse transcriptase [Cauliflower mosaic virus] ... 83 3e-14
ref|NP_861410.1| putative multifunctional pol protein [Cestrum y... 83 3e-14
sp|Q02964.1|POL_CAMVE RecName: Full=Enzymatic polyprotein; Inclu... 83 4e-14
sp|P03556.1|POL_CAMVD RecName: Full=Enzymatic polyprotein; Inclu... 83 4e-14
>gb|AGQ49469.1| reverse transcriptase [Dahlia mosaic virus]
Length = 814
Score = 97.1 bits (240), Expect = 2e-18
Identities = 47/109 (43%), Positives = 69/109 (63%)
Frame = +1
Query: 1 PKLAIPQDEDELVLYTDASDDWWAAVLTKVTPNEEVPCRYCSGLFTDSEANRWHINEKEF 180
PKL +P++E+ L++ TDAS+D+W VL T ++E CRY SG F +E N +H NEKE
Sbjct: 677 PKLYLPKEEEFLIIETDASNDFWGGVLKAKTADKEEVCRYTSGSFKTAEKN-YHSNEKEL 735
Query: 181 FAVRKAFKKWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARLLRWQ 327
AV+ K+ ++L KF ++ DN + FLK KI ++ RL+RWQ
Sbjct: 736 LAVKNTISKFSIYLTPVKFLVRTDNRNFTYFLKTKISGDNKQGRLVRWQ 784
>gb|AEA39176.1| polyprotein [Dahlia mosaic virus]
Length = 808
Score = 95.9 bits (237), Expect = 5e-18
Identities = 46/109 (42%), Positives = 69/109 (63%)
Frame = +1
Query: 1 PKLAIPQDEDELVLYTDASDDWWAAVLTKVTPNEEVPCRYCSGLFTDSEANRWHINEKEF 180
PKL +P++++ L++ TDAS+D+W VL T ++E CRY SG F +E N +H NEKE
Sbjct: 671 PKLYLPKEKEFLIIETDASNDFWGGVLKAKTADKEEVCRYTSGSFKTAEKN-YHSNEKEL 729
Query: 181 FAVRKAFKKWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARLLRWQ 327
AV+ K+ ++L KF ++ DN + FLK KI ++ RL+RWQ
Sbjct: 730 LAVKNTISKFSIYLTPVKFLVRTDNKNFTYFLKTKISGDNKQGRLVRWQ 778
>gb|AEB54984.1| polyprotein [Dahlia mosaic virus D10]
Length = 810
Score = 95.5 bits (236), Expect = 6e-18
Identities = 46/109 (42%), Positives = 69/109 (63%)
Frame = +1
Query: 1 PKLAIPQDEDELVLYTDASDDWWAAVLTKVTPNEEVPCRYCSGLFTDSEANRWHINEKEF 180
PKL +P++++ L++ TDAS+D+W VL T +E CRY SG F +E N +H NEKE
Sbjct: 673 PKLYLPKEKEFLIIETDASNDYWGGVLKAKTAEKEEVCRYTSGSFKTAEKN-YHSNEKEL 731
Query: 181 FAVRKAFKKWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARLLRWQ 327
AV+ A K+ ++L KF ++ D+ + FLK KI ++ RL+RWQ
Sbjct: 732 LAVKNAISKFSIYLTPVKFLVRTDSKNFTYFLKTKISGDNKQGRLVRWQ 780
>gb|ABW80581.1| polyprotein [Dahlia mosaic virus]
Length = 812
Score = 95.5 bits (236), Expect = 6e-18
Identities = 46/109 (42%), Positives = 69/109 (63%)
Frame = +1
Query: 1 PKLAIPQDEDELVLYTDASDDWWAAVLTKVTPNEEVPCRYCSGLFTDSEANRWHINEKEF 180
PKL +P++++ L++ TDAS+D+W VL T ++E CRY SG F +E N +H NEKE
Sbjct: 675 PKLYLPKEKEFLIIETDASNDFWGGVLKAKTADKEEVCRYTSGSFKTAERN-YHSNEKEL 733
Query: 181 FAVRKAFKKWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARLLRWQ 327
AV+ K+ ++L KF ++ DN + FLK KI ++ RL+RWQ
Sbjct: 734 LAVKNTISKFSIYLTPVKFLVRTDNRNFTYFLKTKISGDNKQGRLVRWQ 782
>ref|NP_659397.1| hypothetical protein [Mirabilis mosaic virus]
gi|21427196|gb|AAM53128.1| ORFV [Mirabilis mosaic virus]
Length = 674
Score = 94.4 bits (233), Expect = 1e-17
Identities = 49/117 (41%), Positives = 72/117 (61%), Gaps = 2/117 (1%)
Frame = +1
Query: 1 PKLAIPQDEDELVLYTDASDDWWAAVL-TKVTPNEEVPCRYCSGLFTDSEANRWHINEKE 177
PKL +P+ ED L++ TDASD +W VL + T EE+ CRY SG F +E N +H NEKE
Sbjct: 528 PKLYLPKKEDSLIIETDASDHFWGGVLKAQTTEGEELICRYSSGTFKPAELN-YHSNEKE 586
Query: 178 FFAVRKAFKKWPLFLLAKKFTLKIDN-SSVKAFLKNKIESKPEKARLLRWQAECQYY 345
AV++ K+ ++L FT++ DN + +K F+ KI ++ RL+RWQ +Y
Sbjct: 587 LLAVKQVITKFSIYLTPVCFTVRTDNVNLLKGFMNKKITGDSKQGRLIRWQMWFSHY 643
>gb|AEL30041.1| polymerase polyprotein [Dahlia common mosaic virus]
Length = 673
Score = 93.2 bits (230), Expect = 3e-17
Identities = 48/117 (41%), Positives = 71/117 (60%), Gaps = 2/117 (1%)
Frame = +1
Query: 1 PKLAIPQDEDELVLYTDASDDWWAAVL-TKVTPNEEVPCRYCSGLFTDSEANRWHINEKE 177
PKL +P+ ED L++ TDASD +W VL + T E+ CRY SG F +E N +H NEKE
Sbjct: 530 PKLYLPKKEDSLIIETDASDHFWGGVLKAQTTEGNELICRYSSGTFKPAELN-YHSNEKE 588
Query: 178 FFAVRKAFKKWPLFLLAKKFTLKIDN-SSVKAFLKNKIESKPEKARLLRWQAECQYY 345
AV++ K+ ++L FT++ DN + +K F+ KI ++ RL+RWQ +Y
Sbjct: 589 LLAVKQVITKFSIYLTPVTFTVRTDNVNLLKRFMNTKITGDSKQGRLIRWQMWLSHY 645
>gb|ABW81763.1| reverse transcriptase [Dahlia mosaic virus-Holland]
Length = 673
Score = 93.2 bits (230), Expect = 3e-17
Identities = 48/117 (41%), Positives = 71/117 (60%), Gaps = 2/117 (1%)
Frame = +1
Query: 1 PKLAIPQDEDELVLYTDASDDWWAAVL-TKVTPNEEVPCRYCSGLFTDSEANRWHINEKE 177
PKL +P+ ED L++ TDASD +W VL + T E+ CRY SG F +E N +H NEKE
Sbjct: 530 PKLYLPKKEDSLIIETDASDHFWGGVLKAQTTEGNELICRYSSGTFKPAELN-YHSNEKE 588
Query: 178 FFAVRKAFKKWPLFLLAKKFTLKIDN-SSVKAFLKNKIESKPEKARLLRWQAECQYY 345
AV++ K+ ++L FT++ DN + +K F+ KI ++ RL+RWQ +Y
Sbjct: 589 LLAVKQVITKFSIYLTPVTFTVRTDNVNLLKRFMNTKITGDSKQGRLIRWQMWLSHY 645
>gb|ADZ44590.1| polyprotein [Dahlia mosaic virus]
Length = 806
Score = 92.4 bits (228), Expect = 5e-17
Identities = 44/109 (40%), Positives = 68/109 (62%)
Frame = +1
Query: 1 PKLAIPQDEDELVLYTDASDDWWAAVLTKVTPNEEVPCRYCSGLFTDSEANRWHINEKEF 180
PKL +P++++ ++ TDAS+D+W VL T ++E CRY SG F +E N +H NEK+
Sbjct: 669 PKLYLPKEKEFPIIETDASNDFWGGVLKAKTADKEAVCRYTSGSFKTAEKN-YHSNEKKL 727
Query: 181 FAVRKAFKKWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARLLRWQ 327
AV+ K+ ++L KF ++ DN + FLK KI ++ RL+RWQ
Sbjct: 728 LAVKNTISKFSIYLTPVKFLVRTDNRNFTYFLKTKISGDNKQGRLIRWQ 776
>gb|AGT41978.1| reverse transcriptase [Dahlia mosaic virus]
Length = 825
Score = 90.9 bits (224), Expect = 2e-16
Identities = 45/109 (41%), Positives = 65/109 (59%)
Frame = +1
Query: 1 PKLAIPQDEDELVLYTDASDDWWAAVLTKVTPNEEVPCRYCSGLFTDSEANRWHINEKEF 180
PKL +P ED L++ T AS+++W VL T E C+Y SG F +E N +H NEKE
Sbjct: 684 PKLYLPNKEDFLIIETGASNEFWGGVLKVKTAETEEICKYTSGSFKTAEKN-YHSNEKEL 742
Query: 181 FAVRKAFKKWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARLLRWQ 327
AV+ K+ ++L+ KF ++ DN + FLK KI ++ RL+RWQ
Sbjct: 743 LAVKNTISKFSIYLIPVKFLVRTDNRNFTYFLKTKISGDNKQGRLVRWQ 791
>ref|NP_619548.1| Enzymatic polyprotein [Contains: Aspartic protease; Endonuclease;
Reverse transcriptase] [Figwort mosaic virus]
gi|130600|sp|P09523.1|POL_FMVD RecName: Full=Enzymatic
polyprotein; Includes: RecName: Full=Aspartic protease;
Includes: RecName: Full=Endonuclease; Includes: RecName:
Full=Reverse transcriptase gi|58813|emb|CAA29527.1|
unnamed protein product [Figwort mosaic virus]
Length = 666
Score = 88.2 bits (217), Expect = 1e-15
Identities = 43/110 (39%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Frame = +1
Query: 1 PKLAIPQDEDELVLYTDASDDWWAAVL-TKVTPNEEVPCRYCSGLFTDSEANRWHINEKE 177
PKL +P+ ED L++ TDASD +W VL + E+ CRY SG F +E N +H N+KE
Sbjct: 528 PKLYLPKPEDHLIIETDASDSFWGGVLKARALDGVELICRYSSGSFKQAEKN-YHSNDKE 586
Query: 178 FFAVRKAFKKWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARLLRWQ 327
AV++ K+ +L +FT++ DN + FL+ ++ ++ RL+RWQ
Sbjct: 587 LLAVKQVITKFSAYLTPVRFTVRTDNKNFTYFLRINLKGDSKQGRLVRWQ 636
>ref|NP_612577.1| Enzymatic polyprotein [Contains: Aspartic protease; Endonuclease;
Reverse transcriptase] [Carnation etched ring virus]
gi|130593|sp|P05400.1|POL_CERV RecName: Full=Enzymatic
polyprotein; Includes: RecName: Full=Aspartic protease;
Includes: RecName: Full=Endonuclease; Includes: RecName:
Full=Reverse transcriptase gi|58863|emb|CAA28360.1|
unnamed protein product [Carnation etched ring virus]
gi|225356|prf||1301227E ORF 5
Length = 659
Score = 87.8 bits (216), Expect = 1e-15
Identities = 42/115 (36%), Positives = 67/115 (58%)
Frame = +1
Query: 1 PKLAIPQDEDELVLYTDASDDWWAAVLTKVTPNEEVPCRYCSGLFTDSEANRWHINEKEF 180
PKL P+ D+LV+ TDAS+++W +L + + E CRY SG F +E N +H NEKE
Sbjct: 519 PKLYHPEPNDKLVIETDASEEFWGGILKAIHNSHEYICRYASGSFKAAERN-YHSNEKEL 577
Query: 181 FAVRKAFKKWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARLLRWQAECQYY 345
AV + KK+ ++L +F ++ DN + F+ ++ ++ RL+RWQ Y
Sbjct: 578 LAVIRVIKKFSIYLTPSRFLIRTDNKNFTHFVNINLKGDRKQGRLVRWQMWLSQY 632
>emb|CCG14716.1| ORF V protein [Strawberry vein banding virus]
Length = 699
Score = 87.8 bits (216), Expect = 1e-15
Identities = 46/116 (39%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Frame = +1
Query: 1 PKLAIPQDEDELVLYTDASDDWWAAVL-TKVTPNEEVPCRYCSGLFTDSEANRWHINEKE 177
P L P ED+ ++ DASDD W AVL K+ +EV CRY SG F +E N +H NEKE
Sbjct: 559 PDLYNPSPEDKPIIECDASDDHWGAVLKAKLPEGKEVICRYASGTFKPAEKN-YHSNEKE 617
Query: 178 FFAVRKAFKKWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARLLRWQAECQYY 345
++ KA K + ++L KF ++ DN++ F++ I +++RL+RWQ + Y
Sbjct: 618 ILSIIKAIKAFRAYILPYKFLVRTDNTNAAYFVRTNIAGDYKQSRLVRWQMALREY 673
>ref|NP_043933.1| hypothetical protein [Strawberry vein banding virus]
gi|1360613|emb|CAA65970.1| ORF V [Strawberry vein
banding virus]
Length = 708
Score = 87.4 bits (215), Expect = 2e-15
Identities = 45/116 (38%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Frame = +1
Query: 1 PKLAIPQDEDELVLYTDASDDWWAAVL-TKVTPNEEVPCRYCSGLFTDSEANRWHINEKE 177
P L P ED+ ++ DASDD W A+L K+ +EV CRY SG F +E N +H NEKE
Sbjct: 568 PDLYNPSPEDKPIIECDASDDHWGAILKAKLPEGKEVICRYASGTFKPAEKN-YHSNEKE 626
Query: 178 FFAVRKAFKKWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARLLRWQAECQYY 345
++ KA K + ++L KF ++ DN++ F++ I +++RL+RWQ + Y
Sbjct: 627 ILSIIKAIKAFRAYILPYKFLVRTDNTNAAYFVRTNIAGDYKQSRLVRWQMALREY 682
>ref|YP_001931967.1| replicase [Eupatorium vein clearing virus]
gi|172041764|gb|ACB69773.1| replicase [Eupatorium vein
clearing virus]
Length = 674
Score = 84.7 bits (208), Expect = 1e-14
Identities = 45/120 (37%), Positives = 70/120 (58%), Gaps = 5/120 (4%)
Frame = +1
Query: 1 PKLAIPQDEDELVLYTDASDDWWAAVLTK--VTPNEEVP---CRYCSGLFTDSEANRWHI 165
PKL IPQ +L+L TDAS +W +L + N E+ C Y SG F +E N +H
Sbjct: 531 PKLHIPQPGQQLILETDASQKYWGGILKAEVIHSNNEITEEICCYASGTFKQAELN-YHS 589
Query: 166 NEKEFFAVRKAFKKWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARLLRWQAECQYY 345
NEKE AV ++ + +P++L +F ++ DN +++ FL +K E + RL+RWQ ++Y
Sbjct: 590 NEKEILAVIRSIQSFPVYLTPVEFIVRTDNKTMEHFLTSKFELGTKSGRLVRWQMWFKHY 649
>emb|CAH68829.1| polyprotein [Carnation etched ring virus]
Length = 656
Score = 83.6 bits (205), Expect = 3e-14
Identities = 41/115 (35%), Positives = 66/115 (57%)
Frame = +1
Query: 1 PKLAIPQDEDELVLYTDASDDWWAAVLTKVTPNEEVPCRYCSGLFTDSEANRWHINEKEF 180
PKL P+ D+LV+ TDAS+++W +L + + E CRY SG F +E N +H NEKE
Sbjct: 516 PKLYHPEPNDKLVIETDASEEFWGGILKAIHNSHEYICRYASGSFKAAERN-YHSNEKEL 574
Query: 181 FAVRKAFKKWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARLLRWQAECQYY 345
AV + K+ ++L +F ++ DN + F+ ++ ++ RL+RWQ Y
Sbjct: 575 LAVFRVIYKFSIYLTPCRFLIRSDNKNFTHFVNINLKGDRKQGRLVRWQMWLSQY 629
>gb|AGT42182.1| reverse transcriptase [Cauliflower mosaic virus]
Length = 675
Score = 83.2 bits (204), Expect = 3e-14
Identities = 44/119 (36%), Positives = 67/119 (56%), Gaps = 4/119 (3%)
Frame = +1
Query: 1 PKLAIPQDEDELVLYTDASDDWWAAVLTKVTPNE----EVPCRYCSGLFTDSEANRWHIN 168
P L P E++L++ TDASDD+W +L + NE E+ CRY SG F +E N +H N
Sbjct: 531 PSLHHPLPEEKLIIETDASDDYWGGMLKAIKINEGTNTELICRYASGSFKAAEKN-YHSN 589
Query: 169 EKEFFAVRKAFKKWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARLLRWQAECQYY 345
+KE AV KK+ ++L F ++ DN+ K+F+ + + R +RWQA +Y
Sbjct: 590 DKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHY 648
>gb|AGT42056.1| reverse transcriptase [Cauliflower mosaic virus]
gi|530722419|gb|AGT42084.1| reverse transcriptase
[Cauliflower mosaic virus]
Length = 675
Score = 83.2 bits (204), Expect = 3e-14
Identities = 44/119 (36%), Positives = 67/119 (56%), Gaps = 4/119 (3%)
Frame = +1
Query: 1 PKLAIPQDEDELVLYTDASDDWWAAVLTKVTPNE----EVPCRYCSGLFTDSEANRWHIN 168
P L P E++L++ TDASDD+W +L + NE E+ CRY SG F +E N +H N
Sbjct: 531 PPLHHPLPEEKLIIETDASDDYWGGMLKAIKINEGTNTELICRYASGSFKTAEKN-YHSN 589
Query: 169 EKEFFAVRKAFKKWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARLLRWQAECQYY 345
+KE AV KK+ ++L F ++ DN+ K+F+ + + R +RWQA +Y
Sbjct: 590 DKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHY 648
>ref|NP_861410.1| putative multifunctional pol protein [Cestrum yellow leaf curling
virus] gi|75559686|sp|Q7TD08.1|POL_CYLCV RecName:
Full=Enzymatic polyprotein; Includes: RecName:
Full=Aspartic protease; Includes: RecName:
Full=Endonuclease; Includes: RecName: Full=Reverse
transcriptase gi|32305282|gb|AAP78924.1| putative
multifunctional pol protein [Cestrum yellow leaf curling
virus]
Length = 643
Score = 83.2 bits (204), Expect = 3e-14
Identities = 47/122 (38%), Positives = 70/122 (57%), Gaps = 9/122 (7%)
Frame = +1
Query: 7 LAIPQDEDELVLYTDASDDWWAAVLT-------KVTPNEEVP--CRYCSGLFTDSEANRW 159
L P+ ED L++ TDAS D WA L K T N+ V C+Y SG+F+ +E ++
Sbjct: 498 LYFPKPEDYLIIETDASGDTWAGCLKAAELLFPKGTKNKVVERLCKYTSGIFSSAE-QKY 556
Query: 160 HINEKEFFAVRKAFKKWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARLLRWQAECQ 339
++EKE A K +KW LL K+FTL+ D+S V F ++ +++ + RL+RWQ E
Sbjct: 557 TVHEKETLAALKTMRKWKAELLPKEFTLRTDSSYVTGFARHNLKANYNQGRLVRWQLEFL 616
Query: 340 YY 345
Y
Sbjct: 617 QY 618
>sp|Q02964.1|POL_CAMVE RecName: Full=Enzymatic polyprotein; Includes: RecName:
Full=Aspartic protease; Includes: RecName:
Full=Endonuclease; Includes: RecName: Full=Reverse
transcriptase gi|293185|gb|AAA62375.1| reverse
transcriptase [Cauliflower mosaic virus]
Length = 679
Score = 82.8 bits (203), Expect = 4e-14
Identities = 44/119 (36%), Positives = 67/119 (56%), Gaps = 4/119 (3%)
Frame = +1
Query: 1 PKLAIPQDEDELVLYTDASDDWWAAVLTKVTPNE----EVPCRYCSGLFTDSEANRWHIN 168
P L P E++L++ TDASDD+W +L + NE E+ CRY SG F +E N +H N
Sbjct: 535 PPLHHPLPEEKLIIETDASDDYWGGMLKAIKINEGTNTELICRYASGSFKAAERN-YHSN 593
Query: 169 EKEFFAVRKAFKKWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARLLRWQAECQYY 345
+KE AV KK+ ++L F ++ DN+ K+F+ + + R +RWQA +Y
Sbjct: 594 DKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHY 652
>sp|P03556.1|POL_CAMVD RecName: Full=Enzymatic polyprotein; Includes: RecName:
Full=Aspartic protease; Includes: RecName:
Full=Endonuclease; Includes: RecName: Full=Reverse
transcriptase
Length = 674
Score = 82.8 bits (203), Expect = 4e-14
Identities = 44/119 (36%), Positives = 67/119 (56%), Gaps = 4/119 (3%)
Frame = +1
Query: 1 PKLAIPQDEDELVLYTDASDDWWAAVLTKVTPNE----EVPCRYCSGLFTDSEANRWHIN 168
P L P E++L++ TDASDD+W +L + NE E+ CRY SG F +E N +H N
Sbjct: 530 PPLHHPLPEEKLIIETDASDDYWGGMLKAIKINEGTNTELICRYASGSFKAAEKN-YHSN 588
Query: 169 EKEFFAVRKAFKKWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARLLRWQAECQYY 345
+KE AV KK+ ++L F ++ DN+ K+F+ + + R +RWQA +Y
Sbjct: 589 DKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYKGDSKLGRNIRWQAWLSHY 647