BLASTX nr result

ID: Rehmannia23_contig00028690 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00028690
         (814 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004233592.1| PREDICTED: sister chromatid cohesion 1 prote...    74   5e-11
ref|XP_006338678.1| PREDICTED: sister chromatid cohesion 1 prote...    74   6e-11
ref|XP_002270491.1| PREDICTED: sister chromatid cohesion 1 prote...    64   8e-08
ref|XP_001765599.1| predicted protein [Physcomitrella patens] gi...    57   6e-06
ref|XP_001765550.1| predicted protein [Physcomitrella patens] gi...    57   6e-06

>ref|XP_004233592.1| PREDICTED: sister chromatid cohesion 1 protein 2-like [Solanum
           lycopersicum]
          Length = 617

 Score = 74.3 bits (181), Expect = 5e-11
 Identities = 34/39 (87%), Positives = 36/39 (92%)
 Frame = +3

Query: 396 MFYSQLLLSKKGALGIVWMAAHCHKRLKKDQVQQTNISS 512
           MFYSQLLLSKKG LG +W+AAHCHKRLKKDQVQQTNI S
Sbjct: 1   MFYSQLLLSKKGPLGTIWIAAHCHKRLKKDQVQQTNIVS 39


>ref|XP_006338678.1| PREDICTED: sister chromatid cohesion 1 protein 2-like [Solanum
           tuberosum]
          Length = 627

 Score = 73.9 bits (180), Expect = 6e-11
 Identities = 33/39 (84%), Positives = 37/39 (94%)
 Frame = +3

Query: 396 MFYSQLLLSKKGALGIVWMAAHCHKRLKKDQVQQTNISS 512
           MFYSQLLLSKKG LG +W+AAHCHKRLKK+QVQQTNI+S
Sbjct: 1   MFYSQLLLSKKGPLGTIWIAAHCHKRLKKEQVQQTNIAS 39


>ref|XP_002270491.1| PREDICTED: sister chromatid cohesion 1 protein 2-like [Vitis
           vinifera]
          Length = 756

 Score = 63.5 bits (153), Expect = 8e-08
 Identities = 32/49 (65%), Positives = 39/49 (79%)
 Frame = +3

Query: 366 EANIGKQQKNMFYSQLLLSKKGALGIVWMAAHCHKRLKKDQVQQTNISS 512
           +A  G+++KNMF SQ LLS+KGAL  VW AA+ HK+LKK QV QTNISS
Sbjct: 100 KAEGGREEKNMFESQSLLSRKGALRSVWEAAYFHKKLKKAQVTQTNISS 148


>ref|XP_001765599.1| predicted protein [Physcomitrella patens]
           gi|162683237|gb|EDQ69649.1| predicted protein
           [Physcomitrella patens]
          Length = 201

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 24/38 (63%), Positives = 33/38 (86%)
 Frame = +3

Query: 396 MFYSQLLLSKKGALGIVWMAAHCHKRLKKDQVQQTNIS 509
           MFYSQL+L+KKG LG +W+AAH  ++L+K+QV +TNIS
Sbjct: 1   MFYSQLILAKKGPLGTIWIAAHLERKLRKNQVTETNIS 38


>ref|XP_001765550.1| predicted protein [Physcomitrella patens]
           gi|162683188|gb|EDQ69600.1| predicted protein
           [Physcomitrella patens]
          Length = 125

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 24/38 (63%), Positives = 33/38 (86%)
 Frame = +3

Query: 396 MFYSQLLLSKKGALGIVWMAAHCHKRLKKDQVQQTNIS 509
           MFYSQL+L+KKG LG +W+AAH  ++L+K+QV +TNIS
Sbjct: 1   MFYSQLILAKKGPLGTIWIAAHLERKLRKNQVTETNIS 38


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