BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00027411
         (472 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006363206.1| PREDICTED: pentatricopeptide repeat-containi...   197   2e-48
ref|XP_004233766.1| PREDICTED: pentatricopeptide repeat-containi...   196   2e-48
ref|XP_006448595.1| hypothetical protein CICLE_v10014221mg [Citr...   190   1e-46
gb|EMJ25188.1| hypothetical protein PRUPE_ppa014757mg [Prunus pe...   187   9e-46
ref|XP_006468579.1| PREDICTED: pentatricopeptide repeat-containi...   184   1e-44
ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containi...   178   6e-43
ref|XP_004295518.1| PREDICTED: pentatricopeptide repeat-containi...   174   1e-41
ref|XP_002299387.2| pentatricopeptide repeat-containing family p...   173   2e-41
ref|XP_002532711.1| pentatricopeptide repeat-containing protein,...   173   2e-41
gb|EXB83263.1| hypothetical protein L484_011557 [Morus notabilis]     171   1e-40
gb|EOX96826.1| Tetratricopeptide repeat (TPR)-like superfamily p...   169   3e-40
ref|XP_006402877.1| hypothetical protein EUTSA_v10005782mg [Eutr...   163   2e-38
ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arab...   162   4e-38
ref|NP_191302.2| protein ORGANELLE TRANSCRIPT PROCESSING 84 [Ara...   162   6e-38
gb|AAP40452.1| unknown protein [Arabidopsis thaliana]                 162   6e-38
ref|XP_006290586.1| hypothetical protein CARUB_v10016675mg [Caps...   161   9e-38
gb|ESW10852.1| hypothetical protein PHAVU_009G243400g [Phaseolus...   156   2e-36
ref|XP_006597752.1| PREDICTED: pentatricopeptide repeat-containi...   154   9e-36
ref|XP_004487896.1| PREDICTED: pentatricopeptide repeat-containi...   153   3e-35
emb|CBI27235.3| unnamed protein product [Vitis vinifera]              145   4e-33

>ref|XP_006363206.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Solanum tuberosum]
          Length = 889

 Score =  197 bits (500), Expect = 2e-48
 Identities = 99/156 (63%), Positives = 123/156 (78%), Gaps = 2/156 (1%)
 Frame = -2

Query: 462 LQIQNPSPPLIGKLC--EPTSSDIRSKHSWIESLRSQARSNSFREAITTFVEMQASGVLP 289
           L   +P+  LI K    EPTS +  S  SWI++LRSQ R N F+EAI T+++M + GV P
Sbjct: 33  LSTSSPTSTLIFKNFQQEPTS-ETPSAASWIDALRSQVRLNCFKEAIFTYIQMTSEGVRP 91

Query: 288 DNFAFPAVLKAATALQDLDLGKQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFK 109
           DNF FPAVLKAAT LQDL+LGKQI+G+VVK GYD+ SVTV N+++HL GRCG  +D V+K
Sbjct: 92  DNFVFPAVLKAATGLQDLNLGKQIYGAVVKFGYDTTSVTVANSVIHLLGRCGGSIDDVYK 151

Query: 108 VFDRIPQRDQVSWNSMINALCKYEEWLLALEAFRIM 1
           VFDRI QRDQVSWNS+INALCK+E+W LALEAFR++
Sbjct: 152 VFDRITQRDQVSWNSLINALCKFEKWELALEAFRLI 187



 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 3/124 (2%)
 Frame = -2

Query: 396 RSKHSWIESLRSQARSNSFREAITTFVEM-QASGVLPDNFAFPAVLKAATALQDLDLGKQ 220
           RS   W   L    ++  F EA+T F+EM + SG+ P+     +V  A    +   L + 
Sbjct: 364 RSIGIWNAMLAGYTQNGFFTEALTLFIEMMEFSGLSPNPTTVASVFPACVHCEAFTLKEV 423

Query: 219 IHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMIN--ALC 46
           IHG V+KLG+ S    V N L+ LY R G  ++    +FD +  +D VSWN+MI    +C
Sbjct: 424 IHGYVIKLGF-SDEKYVQNALMDLYSRMG-KINISKYIFDNMESKDIVSWNTMITGFVVC 481

Query: 45  KYEE 34
            Y E
Sbjct: 482 GYHE 485



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
 Frame = -2

Query: 396 RSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLD---LG 226
           R + SW   + +  +   +  A+  F  +   G    +F   ++  A + L   D   LG
Sbjct: 159 RDQVSWNSLINALCKFEKWELALEAFRLIGLDGFEASSFTLVSIALACSNLPRTDGLRLG 218

Query: 225 KQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALC 46
           KQ+HG  +++  D       N L+ +Y + G  VD    VF+    RD VSWN++I++  
Sbjct: 219 KQVHGHSLRI--DDRRTYTNNALMSMYAKLGR-VDDSRAVFELFADRDIVSWNTIISSFS 275

Query: 45  KYEEWLLALEAFRIM 1
           + +++  AL+ FR+M
Sbjct: 276 QNDQFREALDCFRVM 290


>ref|XP_004233766.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Solanum lycopersicum]
          Length = 889

 Score =  196 bits (499), Expect = 2e-48
 Identities = 96/155 (61%), Positives = 122/155 (78%), Gaps = 1/155 (0%)
 Frame = -2

Query: 462 LQIQNPSPPLI-GKLCEPTSSDIRSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPD 286
           L   +P+  LI  K  +  +S+  S  SWI++LRSQ R N F+EAI T+++M + GV PD
Sbjct: 33  LSTSSPTSTLIFKKFQQEHTSETPSSASWIDTLRSQVRLNCFKEAIFTYIQMTSEGVRPD 92

Query: 285 NFAFPAVLKAATALQDLDLGKQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKV 106
           NF FPAVLKAAT LQDL+LGKQI+G+VVK GYD+ SVTV N+++HL GRCG  +D V+K+
Sbjct: 93  NFVFPAVLKAATGLQDLNLGKQIYGAVVKFGYDTISVTVSNSVIHLLGRCGGSIDDVYKL 152

Query: 105 FDRIPQRDQVSWNSMINALCKYEEWLLALEAFRIM 1
           FDRI QRDQVSWNS+INALCK+E+W LALEAFR+M
Sbjct: 153 FDRITQRDQVSWNSLINALCKFEKWELALEAFRLM 187



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 42/124 (33%), Positives = 62/124 (50%), Gaps = 3/124 (2%)
 Frame = -2

Query: 396 RSKHSWIESLRSQARSNSFREAITTFVEM-QASGVLPDNFAFPAVLKAATALQDLDLGKQ 220
           RS   W   L    ++  F EA+  F+EM + SG+ P+     +V  A    +   L + 
Sbjct: 364 RSIGIWNAMLAGYTQNGFFTEALMLFIEMLEFSGLSPNPTTVASVFPACVHCEAFTLKEV 423

Query: 219 IHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMIN--ALC 46
           IHG V+KLG+      V N L+ LY R G  ++    +FD +  +D VSWN+MI    +C
Sbjct: 424 IHGYVIKLGFADEKY-VQNALMDLYSRMG-KINISKYIFDNMESKDIVSWNTMITGFVVC 481

Query: 45  KYEE 34
            Y E
Sbjct: 482 GYHE 485



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 3/135 (2%)
 Frame = -2

Query: 396 RSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLD---LG 226
           R + SW   + +  +   +  A+  F  M   G    +F   ++  A + L   D   LG
Sbjct: 159 RDQVSWNSLINALCKFEKWELALEAFRLMGFDGFEASSFTLVSIALACSNLPRTDGLRLG 218

Query: 225 KQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALC 46
           KQ+HG  +++  D       N L+ +Y + G  VD    VF+    RD VSWN++I++  
Sbjct: 219 KQVHGYSLRI--DDRRTYTNNALMSMYAKLGR-VDDSRAVFELFADRDIVSWNTIISSFS 275

Query: 45  KYEEWLLALEAFRIM 1
           + +++  AL++FR+M
Sbjct: 276 QNDQFREALDSFRVM 290


>ref|XP_006448595.1| hypothetical protein CICLE_v10014221mg [Citrus clementina]
           gi|557551206|gb|ESR61835.1| hypothetical protein
           CICLE_v10014221mg [Citrus clementina]
          Length = 882

 Score =  190 bits (483), Expect = 1e-46
 Identities = 96/156 (61%), Positives = 114/156 (73%)
 Frame = -2

Query: 468 NSLQIQNPSPPLIGKLCEPTSSDIRSKHSWIESLRSQARSNSFREAITTFVEMQASGVLP 289
           +SLQ   P       L  P  S  RSK SWIESLRSQ RSN FREAI +++EM  S + P
Sbjct: 17  SSLQTHQPPATTATSLPLP-GSQTRSKESWIESLRSQTRSNQFREAILSYIEMTRSDIQP 75

Query: 288 DNFAFPAVLKAATALQDLDLGKQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFK 109
           DNFAFPAVLKA   +QDL LGKQIH  VVK GY   SVTV NTL+++YG+CG D+  V+K
Sbjct: 76  DNFAFPAVLKAVAGIQDLSLGKQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYK 135

Query: 108 VFDRIPQRDQVSWNSMINALCKYEEWLLALEAFRIM 1
           VFDRI ++DQVSWNSMI  LC++E+W LALEAFR+M
Sbjct: 136 VFDRITEKDQVSWNSMIATLCRFEKWDLALEAFRMM 171



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 2/124 (1%)
 Frame = -2

Query: 384 SWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 205
           SW   + S ++++ F EA+    +M   G+ PD  +  +VL A + L+ LD GK+IH   
Sbjct: 250 SWNTIISSSSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDTGKEIHAYA 309

Query: 204 VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMIN--ALCKYEEW 31
           ++      +  V + L+ +Y  C  +V+   +VFD I  +    WN+MI   A  +Y+E 
Sbjct: 310 LRNDILIDNSFVGSALVDMYCNC-REVECGRRVFDFISDKKIALWNAMITGYAQNEYDEE 368

Query: 30  LLAL 19
            L L
Sbjct: 369 ALML 372


>gb|EMJ25188.1| hypothetical protein PRUPE_ppa014757mg [Prunus persica]
          Length = 901

 Score =  187 bits (476), Expect = 9e-46
 Identities = 100/170 (58%), Positives = 122/170 (71%), Gaps = 14/170 (8%)
 Frame = -2

Query: 468 NSLQIQNPSP---------PLIGKLCEPTS-----SDIRSKHSWIESLRSQARSNSFREA 331
           +SLQI  P+          P++ +    TS     S  R+  SWIE+LRSQ RSN FREA
Sbjct: 22  SSLQIHQPTTLKRNTLKQSPILNQPTTTTSPPKLLSHSRTPASWIETLRSQTRSNHFREA 81

Query: 330 ITTFVEMQASGVLPDNFAFPAVLKAATALQDLDLGKQIHGSVVKLGYDSHSVTVCNTLLH 151
           I T++EM  SG++PDNFAFPAVLKA T+LQDL+LGKQIH  +VK GY S SVTV NTL++
Sbjct: 82  ILTYIEMTLSGIVPDNFAFPAVLKAVTSLQDLNLGKQIHAHIVKFGYGSSSVTVANTLVN 141

Query: 150 LYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALCKYEEWLLALEAFRIM 1
           +YG+CG D+    KVFD I +RDQVSWNSMI ALC++EEW LALEAFR M
Sbjct: 142 VYGKCG-DIGDACKVFDGIIERDQVSWNSMIAALCRFEEWELALEAFRSM 190



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
 Frame = -2

Query: 432 IGKLCEPTSSDI-RSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKA 256
           IG  C+     I R + SW   + +  R   +  A+  F  M    + P +F   +V  A
Sbjct: 149 IGDACKVFDGIIERDQVSWNSMIAALCRFEEWELALEAFRSMLMENMEPSSFTLVSVALA 208

Query: 255 ATALQDLD---LGKQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQR 85
            + L   D   LGKQ+H   V++  +  + T+ N LL +Y + G+  +    +F+     
Sbjct: 209 CSNLHKRDGLRLGKQVHAYSVRMS-ECKTFTI-NALLAMYSKLGE-AEYSRALFELYEDC 265

Query: 84  DQVSWNSMINALCKYEEWLLALEAFRIM 1
           D VSWN+MI++L + ++++ ALE FR+M
Sbjct: 266 DMVSWNTMISSLSQNDQFMEALEFFRLM 293



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 37/125 (29%), Positives = 60/125 (48%)
 Frame = -2

Query: 384 SWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 205
           SW   + S ++++ F EA+  F  M  +G  PD     +VL A + L+ LD GK+IH   
Sbjct: 269 SWNTMISSLSQNDQFMEALEFFRLMVLAGFKPDGVTVASVLPACSHLEMLDTGKEIHAYA 328

Query: 204 VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALCKYEEWLL 25
           ++      +  V + L+ +Y  C   V    +VF+ + +R    WN+MI    + E    
Sbjct: 329 LRTNELIENSYVGSALVDMYCNC-RQVSSGCRVFNAVLERKIALWNAMITGYAQNEYNKE 387

Query: 24  ALEAF 10
           AL  F
Sbjct: 388 ALNLF 392


>ref|XP_006468579.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Citrus sinensis]
          Length = 882

 Score =  184 bits (467), Expect = 1e-44
 Identities = 88/135 (65%), Positives = 106/135 (78%)
 Frame = -2

Query: 405 SDIRSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDLG 226
           S  RSK SWIESLRSQ RSN FREAI +++EM  S + PDNFAFP+VLKA   +QDL LG
Sbjct: 37  SQTRSKESWIESLRSQTRSNQFREAILSYIEMTRSDIQPDNFAFPSVLKAVAGIQDLSLG 96

Query: 225 KQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALC 46
           KQIH  VVK GY   SVTV NTL+++YG+CG D+  V+KVFDRI ++DQVSWNSMI  LC
Sbjct: 97  KQIHAHVVKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLC 156

Query: 45  KYEEWLLALEAFRIM 1
           ++ +W LALEAFR+M
Sbjct: 157 RFGKWDLALEAFRMM 171



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 40/133 (30%), Positives = 70/133 (52%), Gaps = 5/133 (3%)
 Frame = -2

Query: 384 SWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLD---LGKQIH 214
           SW   + +  R   +  A+  F  M  S V P +F   +V  A + L   D   LG+Q+H
Sbjct: 147 SWNSMIATLCRFGKWDLALEAFRMMLYSNVEPSSFTLVSVALACSNLSRRDGLRLGRQVH 206

Query: 213 GSVVKLGYDSHSVTVCNTLLHLYGRCG--DDVDQVFKVFDRIPQRDQVSWNSMINALCKY 40
           G+ +++G    +  + N L+ +Y + G  DD   +FK F+    RD VSWN+++++L + 
Sbjct: 207 GNSLRVG--EWNTFIMNALMAMYAKLGRVDDAKTLFKSFE---DRDLVSWNTIVSSLSQN 261

Query: 39  EEWLLALEAFRIM 1
           +++L A+   R M
Sbjct: 262 DKFLEAVMFLRQM 274



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 2/132 (1%)
 Frame = -2

Query: 408 SSDIRSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDL 229
           S + R   SW   + S ++++ F EA+    +M   G+ PD  +  +VL A + L+ LD 
Sbjct: 242 SFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGIKPDGVSIASVLPACSHLEMLDT 301

Query: 228 GKQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINAL 49
           GK+IH   ++      +  V + L+ +Y  C  +V+   +VFD I  +    WN+MI   
Sbjct: 302 GKEIHAYALRNDILIDNSFVGSALVDMYCNC-REVECGRRVFDFISDKKIALWNAMITGY 360

Query: 48  --CKYEEWLLAL 19
              +Y+E  L L
Sbjct: 361 GQNEYDEEALML 372


>ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  178 bits (452), Expect = 6e-43
 Identities = 91/153 (59%), Positives = 111/153 (72%), Gaps = 1/153 (0%)
 Frame = -2

Query: 456 IQNPSP-PLIGKLCEPTSSDIRSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNF 280
           IQ P+  PL  K     +S  RS  SW+++LRS+ RSN FREAI+T++EM  SG  PDNF
Sbjct: 34  IQKPTASPLTSKTPPKPTSPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNF 93

Query: 279 AFPAVLKAATALQDLDLGKQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFD 100
           AFPAVLKA + LQDL  G+QIH + VK GY S SVTV NTL+++YG+CG  +  V KVFD
Sbjct: 94  AFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCG-GIGDVCKVFD 152

Query: 99  RIPQRDQVSWNSMINALCKYEEWLLALEAFRIM 1
           RI  RDQVSWNS I ALC++E+W  ALEAFR M
Sbjct: 153 RITDRDQVSWNSFIAALCRFEKWEQALEAFRAM 185



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 42/135 (31%), Positives = 69/135 (51%), Gaps = 3/135 (2%)
 Frame = -2

Query: 396 RSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATAL---QDLDLG 226
           R + SW   + +  R   + +A+  F  MQ   +   +F   +V  A + L     L LG
Sbjct: 157 RDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLG 216

Query: 225 KQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALC 46
           KQ+HG  +++G D  + T  N L+ +Y + G  VD    +F+    RD VSWN+MI++  
Sbjct: 217 KQLHGYSLRVG-DQKTFTN-NALMAMYAKLGR-VDDSKALFESFVDRDMVSWNTMISSFS 273

Query: 45  KYEEWLLALEAFRIM 1
           + + +  AL  FR+M
Sbjct: 274 QSDRFSEALAFFRLM 288



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
 Frame = -2

Query: 381 WIESLRSQARSNSFREAITTFVEM-QASGVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 205
           W   +   AR+    +A+  F+EM + +G+LP+     +V+ A    +     + IHG  
Sbjct: 367 WNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYA 426

Query: 204 VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMI 58
           VKLG+      V N L+ +Y R G  +D    +FD +  RD+VSWN+MI
Sbjct: 427 VKLGFKEDRY-VQNALMDMYSRMG-KMDISETIFDSMEVRDRVSWNTMI 473



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 38/118 (32%), Positives = 59/118 (50%)
 Frame = -2

Query: 396 RSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDLGKQI 217
           R   SW   + S ++S+ F EA+  F  M   GV  D     +VL A + L+ LD+GK+I
Sbjct: 260 RDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEI 319

Query: 216 HGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALCK 43
           H  V++      +  V + L+ +Y  C   V+   +VFD I  R    WN+MI+   +
Sbjct: 320 HAYVLRNNDLIENSFVGSALVDMYCNC-RQVESGRRVFDHILGRRIELWNAMISGYAR 376


>ref|XP_004295518.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 893

 Score =  174 bits (441), Expect = 1e-41
 Identities = 89/164 (54%), Positives = 117/164 (71%), Gaps = 8/164 (4%)
 Frame = -2

Query: 468 NSLQIQNP------SPPLIGKLCEPTSSD--IRSKHSWIESLRSQARSNSFREAITTFVE 313
           +SLQIQ P      +PP    +   TS+   I    +WI+++R+Q RS  + EAI+T++ 
Sbjct: 20  SSLQIQQPPTTPKTTPPKPITITTTTSTPKPISDSRTWIDTIRTQTRSGHYNEAISTYIN 79

Query: 312 MQASGVLPDNFAFPAVLKAATALQDLDLGKQIHGSVVKLGYDSHSVTVCNTLLHLYGRCG 133
           M  SG+ PDNFAFPAVLKA  AL DL LG+Q+H  VVK GY+S SVTV N+L+++YG+CG
Sbjct: 80  MTRSGIRPDNFAFPAVLKAVAALHDLRLGQQVHACVVKFGYESGSVTVANSLVNVYGKCG 139

Query: 132 DDVDQVFKVFDRIPQRDQVSWNSMINALCKYEEWLLALEAFRIM 1
            D+   +KVFD + +RDQVSWNSMI ALC++EEW LALEAFR M
Sbjct: 140 -DIGDAYKVFDGMTERDQVSWNSMIAALCRFEEWELALEAFRSM 182



 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 43/135 (31%), Positives = 71/135 (52%), Gaps = 3/135 (2%)
 Frame = -2

Query: 396 RSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLD---LG 226
           R + SW   + +  R   +  A+  F  M    V+P +F   +   A + L   D   LG
Sbjct: 154 RDQVSWNSMIAALCRFEEWELALEAFRSMFEDNVVPSSFTLVSAALACSNLDKRDGLRLG 213

Query: 225 KQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALC 46
           KQ+HG  V++  +S + TV N L+ +Y + G  V     VF+   + D VSWN+M+++L 
Sbjct: 214 KQVHGYSVRM-CESKTFTV-NALMSMYAKLGM-VGYSRGVFELFEECDLVSWNTMVSSLS 270

Query: 45  KYEEWLLALEAFRIM 1
           + + ++ ALE FR+M
Sbjct: 271 QNDRFMEALEFFRLM 285



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 36/125 (28%), Positives = 63/125 (50%)
 Frame = -2

Query: 384 SWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 205
           SW   + S ++++ F EA+  F  M   G+ PD     +VL A + L+ L+ GK+IH   
Sbjct: 261 SWNTMVSSLSQNDRFMEALEFFRLMILEGIRPDGVTIASVLPACSHLEMLEAGKEIHAYA 320

Query: 204 VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALCKYEEWLL 25
           ++    + +  V + L+ +Y  C  +V+   +VFD + +     WN+MI    + E    
Sbjct: 321 LRANELTGNSYVGSALVDMYCNC-REVESGRRVFDAVMEWKVPLWNAMITGYAQNEYDEE 379

Query: 24  ALEAF 10
           AL+ F
Sbjct: 380 ALDLF 384


>ref|XP_002299387.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550347073|gb|EEE84192.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 894

 Score =  173 bits (439), Expect = 2e-41
 Identities = 90/159 (56%), Positives = 116/159 (72%), Gaps = 8/159 (5%)
 Frame = -2

Query: 453 QNPSPPLIGKLCEPTSSDI-------RSKHSWIESLRSQARSNSFREAITTFVEMQASGV 295
           Q   PP+     +P SS          S+ SWIESLRS++RSN FREAI+T++EM  SGV
Sbjct: 27  QPTKPPISSSSPKPISSSSPKPISISHSQASWIESLRSRSRSNLFREAISTYIEMIGSGV 86

Query: 294 LPDNFAFPAVLKAATALQDLDLGKQIHGSVVKLGYDS-HSVTVCNTLLHLYGRCGDDVDQ 118
            PDNFAFPAVLKA   +Q+L LGKQIH  V K GY S  SVT+ NTL+++YG+CG  +  
Sbjct: 87  SPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCG-GLGD 145

Query: 117 VFKVFDRIPQRDQVSWNSMINALCKYEEWLLALEAFRIM 1
            +KVFDRI +RDQVSWNS+I+ALC++EEW +A++AFR+M
Sbjct: 146 AYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLM 184



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 5/137 (3%)
 Frame = -2

Query: 396 RSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLD---LG 226
           R + SW   + +  R   +  AI  F  M   G  P +F   ++  A + L+  D   LG
Sbjct: 156 RDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRDGLWLG 215

Query: 225 KQIHGSVVKLGYDSHSVTVCNTLLHLYGRCG--DDVDQVFKVFDRIPQRDQVSWNSMINA 52
           KQIHG   + G+        N L+ +Y + G  DD   +  +F+    RD V+WNSMI++
Sbjct: 216 KQIHGCCFRKGH--WRTFSNNALMAMYAKLGRLDDAKSLLVLFE---DRDLVTWNSMISS 270

Query: 51  LCKYEEWLLALEAFRIM 1
             + E ++ AL   R+M
Sbjct: 271 FSQNERFMEALMFLRLM 287


>ref|XP_002532711.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527557|gb|EEF29678.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 679

 Score =  173 bits (439), Expect = 2e-41
 Identities = 85/135 (62%), Positives = 106/135 (78%)
 Frame = -2

Query: 405 SDIRSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDLG 226
           S  RS+ SWIESLR   RSN FREAI+T+V+M  SGV PD++AFP VLKA T LQDL+LG
Sbjct: 37  SQSRSQASWIESLRFNTRSNLFREAISTYVDMILSGVSPDSYAFPVVLKAVTGLQDLNLG 96

Query: 225 KQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALC 46
           KQIH  VVK GY+S SV + N+L++ YG+C  ++D V+KVFDRI +RD VSWNS+I+A C
Sbjct: 97  KQIHAHVVKYGYESSSVAIANSLVNFYGKC-SELDDVYKVFDRINERDLVSWNSLISAFC 155

Query: 45  KYEEWLLALEAFRIM 1
           + +EW LALEAFR M
Sbjct: 156 RAQEWELALEAFRFM 170



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 41/129 (31%), Positives = 62/129 (48%)
 Frame = -2

Query: 396 RSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDLGKQI 217
           R+  SW   + S +++  F EA+ +   M   GV PD     +VL A + L+ L  GK+I
Sbjct: 245 RNLISWNTMISSFSQNERFVEALMSLRYMVLEGVKPDGVTLASVLPACSYLEMLGTGKEI 304

Query: 216 HGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALCKYE 37
           H   ++ G    +  V + L+ +Y  CG  V    +VFD I +R    WN+MI    + E
Sbjct: 305 HAYALRSGDLIENSFVGSALVDMYCNCG-QVGSGRRVFDGILERKTGLWNAMIAGYAQNE 363

Query: 36  EWLLALEAF 10
               AL  F
Sbjct: 364 HDEKALMLF 372



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 5/133 (3%)
 Frame = -2

Query: 384 SWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATAL---QDLDLGKQIH 214
           SW   + +  R+  +  A+  F  M A  + P +F   + + A + L   + L LGKQIH
Sbjct: 146 SWNSLISAFCRAQEWELALEAFRFMLAEDLEPSSFTLVSPVIACSNLRKHEGLRLGKQIH 205

Query: 213 GSVVKLGYDSHSVTVCNTLLHLYGRCG--DDVDQVFKVFDRIPQRDQVSWNSMINALCKY 40
           G   + G+   S    N L+ +Y   G  DD   +FK+F+    R+ +SWN+MI++  + 
Sbjct: 206 GYCFRNGH--WSTFTNNALMTMYANLGRLDDAKFLFKLFE---DRNLISWNTMISSFSQN 260

Query: 39  EEWLLALEAFRIM 1
           E ++ AL + R M
Sbjct: 261 ERFVEALMSLRYM 273


>gb|EXB83263.1| hypothetical protein L484_011557 [Morus notabilis]
          Length = 877

 Score =  171 bits (432), Expect = 1e-40
 Identities = 84/128 (65%), Positives = 101/128 (78%)
 Frame = -2

Query: 384 SWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 205
           SWIESLRSQ R+N FR+A++T+  M  + + PDNFAFP +LKAAT+L+DL LG+QIH  V
Sbjct: 43  SWIESLRSQVRNNLFRDAVSTYTSMTMA-IPPDNFAFPPILKAATSLRDLSLGRQIHAHV 101

Query: 204 VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALCKYEEWLL 25
            K GY S SVTV NTL+++YG+CG D+    KVFDRIPQRDQVSWNSMI ALC + EW L
Sbjct: 102 FKFGYASSSVTVANTLVNMYGKCG-DIGDAHKVFDRIPQRDQVSWNSMIAALCHFGEWAL 160

Query: 24  ALEAFRIM 1
           ALEAFR M
Sbjct: 161 ALEAFRAM 168


>gb|EOX96826.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao]
          Length = 955

 Score =  169 bits (428), Expect = 3e-40
 Identities = 87/140 (62%), Positives = 104/140 (74%), Gaps = 2/140 (1%)
 Frame = -2

Query: 414 PTSSDIRSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDL 235
           PT +   S+ SW ESLRS  RSN F +AI T+V M +SG+ PD+FAFPAVLKA TAL DL
Sbjct: 108 PTKTRSLSQGSWTESLRSNTRSNRFHQAILTYVSMSSSGIPPDHFAFPAVLKAVTALHDL 167

Query: 234 DLGKQIHGSVVKLGY--DSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSM 61
            LGKQIH  V+K GY   + SVTV NTL++ YG+CGD  D V+KVFDRI QRD VSWNS 
Sbjct: 168 ALGKQIHAQVLKFGYGFGTSSVTVANTLVNFYGKCGDIWD-VYKVFDRIHQRDTVSWNSF 226

Query: 60  INALCKYEEWLLALEAFRIM 1
           I+A C+ E+W  ALEAFR+M
Sbjct: 227 ISAFCRLEDWEAALEAFRLM 246


>ref|XP_006402877.1| hypothetical protein EUTSA_v10005782mg [Eutrema salsugineum]
           gi|557103976|gb|ESQ44330.1| hypothetical protein
           EUTSA_v10005782mg [Eutrema salsugineum]
          Length = 888

 Score =  163 bits (413), Expect = 2e-38
 Identities = 79/132 (59%), Positives = 99/132 (75%)
 Frame = -2

Query: 396 RSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDLGKQI 217
           RS   WI+SLRS+ RSN  REA+ T+++M   G+ PDNF FPA+LKA   LQD+DLGKQI
Sbjct: 58  RSTEWWIDSLRSKVRSNLLREAVFTYIDMVLLGIKPDNFVFPALLKAVADLQDMDLGKQI 117

Query: 216 HGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALCKYE 37
           H  V K GY   SVTV NTL++ Y +CG D   V+KVFDRI +R+QVSWNSMI++LC +E
Sbjct: 118 HAHVYKFGYGVDSVTVANTLVNFYRKCG-DFGAVYKVFDRISERNQVSWNSMISSLCSFE 176

Query: 36  EWLLALEAFRIM 1
           +W +ALEAFR M
Sbjct: 177 KWEMALEAFRCM 188



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 49/156 (31%), Positives = 69/156 (44%), Gaps = 7/156 (4%)
 Frame = -2

Query: 456 IQNPSPPLIGKLCEPTSSDI-------RSKHSWIESLRSQARSNSFREAITTFVEMQASG 298
           I N    + GKL +  SS I       R+  +W   L S  ++  F EA+    EM   G
Sbjct: 236 IINTLVAMYGKLGKLASSKILLGTFEGRNLVTWNTVLSSLCQNEQFLEALEYLREMVLKG 295

Query: 297 VLPDNFAFPAVLKAATALQDLDLGKQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQ 118
           V PD F   +VL   + L+ L  GK++H   +K G    +  V + L+ +Y  C   V  
Sbjct: 296 VEPDGFTISSVLPVCSHLEMLRTGKEMHAYALKNGSLDENSFVGSALVDMYCNC-KQVLS 354

Query: 117 VFKVFDRIPQRDQVSWNSMINALCKYEEWLLALEAF 10
             +VFD I  R    WN+MI    + E    AL  F
Sbjct: 355 ARRVFDVIFDRRIGLWNAMIAGYAQNEHDEEALSLF 390


>ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata] gi|297323990|gb|EFH54411.1| hypothetical protein
           ARALYDRAFT_486188 [Arabidopsis lyrata subsp. lyrata]
          Length = 886

 Score =  162 bits (410), Expect = 4e-38
 Identities = 79/135 (58%), Positives = 100/135 (74%)
 Frame = -2

Query: 405 SDIRSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDLG 226
           S   S   WI+ LRS+ RSN  REA+ T+++M   G+ PDNFAFPA+LKA   LQD+DLG
Sbjct: 53  SQSHSPEWWIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLG 112

Query: 225 KQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALC 46
           KQIH  V K GY   SVTV NTL++LY +CG D   V+KVFDRI +R+QVSWNS+I++LC
Sbjct: 113 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCG-DFGAVYKVFDRISERNQVSWNSLISSLC 171

Query: 45  KYEEWLLALEAFRIM 1
            +E+W +ALEAFR M
Sbjct: 172 SFEKWEMALEAFRCM 186



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 48/155 (30%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
 Frame = -2

Query: 456 IQNPSPPLIGKLCEPTSSDI-------RSKHSWIESLRSQARSNSFREAITTFVEMQASG 298
           I N    + GK+ +  SS +       R   +W   L S  ++  F EA+    EM   G
Sbjct: 234 IINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEG 293

Query: 297 VLPDNFAFPAVLKAATALQDLDLGKQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQ 118
           V PD F   +VL A + L+ L  GK++H   +K G    +  V + L+ +Y  C   V  
Sbjct: 294 VEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNC-KQVLS 352

Query: 117 VFKVFDRIPQRDQVSWNSMIN--ALCKYEEWLLAL 19
             +VFD +  R    WN+MI   A  +Y+E  L L
Sbjct: 353 GCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLL 387



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 4/131 (3%)
 Frame = -2

Query: 381 WIESLRSQARSNSFREAITTFVEMQAS-GVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 205
           W   +   A++    EA+  F+EM+ S G+L ++     V+ A          + IHG V
Sbjct: 368 WNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFV 427

Query: 204 VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALC---KYEE 34
           VK G D     V N L+ +Y R G  +D   ++F ++  RD V+WN++I       ++E+
Sbjct: 428 VKRGLDRDRF-VQNALMDMYSRLG-KIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHED 485

Query: 33  WLLALEAFRIM 1
            LL L   +I+
Sbjct: 486 ALLMLHKMQIL 496


>ref|NP_191302.2| protein ORGANELLE TRANSCRIPT PROCESSING 84 [Arabidopsis thaliana]
           gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g57430, chloroplastic; Flags: Precursor
           gi|332646133|gb|AEE79654.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score =  162 bits (409), Expect = 6e-38
 Identities = 79/135 (58%), Positives = 101/135 (74%)
 Frame = -2

Query: 405 SDIRSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDLG 226
           S  RS   WI+ LRS+ RSN  REA+ T+V+M   G+ PDN+AFPA+LKA   LQD++LG
Sbjct: 57  SQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELG 116

Query: 225 KQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALC 46
           KQIH  V K GY   SVTV NTL++LY +CG D   V+KVFDRI +R+QVSWNS+I++LC
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCG-DFGAVYKVFDRISERNQVSWNSLISSLC 175

Query: 45  KYEEWLLALEAFRIM 1
            +E+W +ALEAFR M
Sbjct: 176 SFEKWEMALEAFRCM 190



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
 Frame = -2

Query: 381 WIESLRSQARSNSFREAITTFVEMQAS-GVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 205
           W   +   +++   +EA+  F+ M+ S G+L ++     V+ A          + IHG V
Sbjct: 372 WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFV 431

Query: 204 VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMI 58
           VK G D     V NTL+ +Y R G  +D   ++F ++  RD V+WN+MI
Sbjct: 432 VKRGLDRDRF-VQNTLMDMYSRLGK-IDIAMRIFGKMEDRDLVTWNTMI 478


>gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
          Length = 890

 Score =  162 bits (409), Expect = 6e-38
 Identities = 79/135 (58%), Positives = 101/135 (74%)
 Frame = -2

Query: 405 SDIRSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDLG 226
           S  RS   WI+ LRS+ RSN  REA+ T+V+M   G+ PDN+AFPA+LKA   LQD++LG
Sbjct: 57  SQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELG 116

Query: 225 KQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALC 46
           KQIH  V K GY   SVTV NTL++LY +CG D   V+KVFDRI +R+QVSWNS+I++LC
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCG-DFGAVYKVFDRISERNQVSWNSLISSLC 175

Query: 45  KYEEWLLALEAFRIM 1
            +E+W +ALEAFR M
Sbjct: 176 SFEKWEMALEAFRCM 190



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
 Frame = -2

Query: 381 WIESLRSQARSNSFREAITTFVEMQAS-GVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 205
           W   +   +++   +EA+  F+ M+ S G+L ++     V+ A          + IHG V
Sbjct: 372 WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFV 431

Query: 204 VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMI 58
           VK G D     V NTL+ +Y R G  +D   ++F ++  RD V+WN+MI
Sbjct: 432 VKRGLDRDRF-VQNTLMDMYSRLGK-IDIAMRIFGKMEDRDLVTWNTMI 478


>ref|XP_006290586.1| hypothetical protein CARUB_v10016675mg [Capsella rubella]
           gi|482559293|gb|EOA23484.1| hypothetical protein
           CARUB_v10016675mg [Capsella rubella]
          Length = 882

 Score =  161 bits (407), Expect = 9e-38
 Identities = 78/135 (57%), Positives = 101/135 (74%)
 Frame = -2

Query: 405 SDIRSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDLG 226
           S  RS   WI+SLRS+ R++  REA+ T+++M   G+ PD FAFPA+LKA   LQD+DLG
Sbjct: 49  SQSRSPEWWIDSLRSKVRASLLREAVLTYIDMIVLGIKPDKFAFPALLKAVADLQDMDLG 108

Query: 225 KQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALC 46
           KQIH  V K GY   SVTV NTL++LY +CG D   V+KVFDRI +R+QVSWNS+I++LC
Sbjct: 109 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCG-DFGAVYKVFDRISERNQVSWNSLISSLC 167

Query: 45  KYEEWLLALEAFRIM 1
            +E+W +ALEAFR M
Sbjct: 168 SFEKWEMALEAFRCM 182



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 40/125 (32%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
 Frame = -2

Query: 381 WIESLRSQARSNSFREAITTFVEM-QASGVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 205
           W   +   A++    EA+  F+EM Q++G+L +      V+ A          + IHG V
Sbjct: 364 WNAMITGYAQNEHDVEALLLFIEMEQSAGLLANTTTMAGVVPACVRSDAFSKKEAIHGFV 423

Query: 204 VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINA---LCKYEE 34
           VK G D     V N L+ +Y R G  +D   ++F ++  RD V+WN+MI     L ++E+
Sbjct: 424 VKRGLDRDRF-VKNALMDMYSRLGK-IDIAKQIFSKMEDRDLVTWNTMITGYVFLERHED 481

Query: 33  WLLAL 19
            LL L
Sbjct: 482 ALLVL 486



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 3/135 (2%)
 Frame = -2

Query: 396 RSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATAL---QDLDLG 226
           R++ SW   + S      +  A+  F  M    V P +F   +V  A + +   + L LG
Sbjct: 154 RNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVALACSNVPMPEGLRLG 213

Query: 225 KQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALC 46
           KQ+H   ++ G    +  + NTL+ +YG+ G        +      RD V+WN+++++LC
Sbjct: 214 KQVHAYSLRKG--ELNSFIINTLVAMYGKLGKLASSK-SLLGSFEGRDLVTWNTLLSSLC 270

Query: 45  KYEEWLLALEAFRIM 1
           + E++L ALE  R M
Sbjct: 271 QNEQFLEALEYLREM 285



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 39/125 (31%), Positives = 58/125 (46%)
 Frame = -2

Query: 384 SWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDLGKQIHGSV 205
           +W   L S  ++  F EA+    EM   GV PD F   +VL   + L+ L  GK++H   
Sbjct: 261 TWNTLLSSLCQNEQFLEALEYLREMVLKGVEPDGFTISSVLPVCSHLEMLRTGKELHAYA 320

Query: 204 VKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALCKYEEWLL 25
           +K G    +  V + L+ +Y  C   V    +VFD +  R    WN+MI    + E  + 
Sbjct: 321 LKNGSLDENSFVGSALVDMYCNC-KRVLSARRVFDGMFDRKIGLWNAMITGYAQNEHDVE 379

Query: 24  ALEAF 10
           AL  F
Sbjct: 380 ALLLF 384


>gb|ESW10852.1| hypothetical protein PHAVU_009G243400g [Phaseolus vulgaris]
          Length = 882

 Score =  156 bits (395), Expect = 2e-36
 Identities = 85/159 (53%), Positives = 110/159 (69%), Gaps = 3/159 (1%)
 Frame = -2

Query: 468 NSLQIQNP--SPPLIGKLCEPTSS-DIRSKHSWIESLRSQARSNSFREAITTFVEMQASG 298
           ++L I  P  SPP       PT++ + RS   WI+ LRSQ +S+SFR+AI T+  M A+ 
Sbjct: 23  HTLTIPTPKHSPP-------PTAAVERRSPSQWIDLLRSQTQSSSFRDAIATYAAMLAAA 75

Query: 297 VLPDNFAFPAVLKAATALQDLDLGKQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQ 118
             PDNFAFPAVLKAATA+ DL LGKQ+H  V K G  + SV V NTLL++YG+CG D+  
Sbjct: 76  AAPDNFAFPAVLKAATAVHDLSLGKQLHAHVFKFG-QAPSVAVANTLLNMYGKCG-DLAA 133

Query: 117 VFKVFDRIPQRDQVSWNSMINALCKYEEWLLALEAFRIM 1
             ++FD IP+RD VSWNSMI  LC++EEW L+L  FR+M
Sbjct: 134 ARRLFDEIPERDHVSWNSMIATLCRFEEWELSLHLFRLM 172


>ref|XP_006597752.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 880

 Score =  154 bits (390), Expect = 9e-36
 Identities = 82/158 (51%), Positives = 107/158 (67%), Gaps = 1/158 (0%)
 Frame = -2

Query: 471 SNSLQIQNPSPPLIGKLCEPTSSDIRSKHSWIESLRSQARSNSFREAITTFVEMQASGVL 292
           ++ L +  P+PP       PT+ + RS   WI+ LRSQ  S+SFR+AI+T+  M A+   
Sbjct: 20  THPLTLTLPTPP-------PTTVERRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAP 72

Query: 291 PDNFAFPAVLKAATALQDLDLGKQIHGSVVKLGY-DSHSVTVCNTLLHLYGRCGDDVDQV 115
           PDNFAFPAVLKAA A+ DL LGKQIH  V K G+    SV V N+L+++YG+CG D+   
Sbjct: 73  PDNFAFPAVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCG-DLTAA 131

Query: 114 FKVFDRIPQRDQVSWNSMINALCKYEEWLLALEAFRIM 1
            +VFD IP RD VSWNSMI  LC++EEW L+L  FR+M
Sbjct: 132 RQVFDDIPDRDHVSWNSMIATLCRFEEWELSLHLFRLM 169



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
 Frame = -2

Query: 324 TFVEMQASGVLP---DNFAFPAVLKAATALQDLDLGKQIHGSVVKLGYDSHSVTVCNTLL 154
           TFV+ +  G +P   ++     VL    AL  L  GK+IH   VK    +  V V + L+
Sbjct: 485 TFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKL-AMDVAVGSALV 543

Query: 153 HLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALCKYEEWLLALEAFRIM 1
            +Y +CG  ++   +VFD++P R+ ++WN +I A   + +   ALE FRIM
Sbjct: 544 DMYAKCGC-LNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIM 593


>ref|XP_004487896.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like isoform X1 [Cicer arietinum]
           gi|502085351|ref|XP_004487897.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like isoform X2 [Cicer arietinum]
          Length = 872

 Score =  153 bits (386), Expect = 3e-35
 Identities = 75/139 (53%), Positives = 100/139 (71%), Gaps = 2/139 (1%)
 Frame = -2

Query: 411 TSSDIRSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLD 232
           TS++  S  +WI+ LRSQ +S+SF +AI+T+  M  +GV PDNFAFPAVLKA  A QDL+
Sbjct: 25  TSAEPHSPSAWIDRLRSQVQSSSFHQAISTYTNMVTAGVPPDNFAFPAVLKATAATQDLN 84

Query: 231 LGKQIHGSVVKLG--YDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMI 58
           LGKQIHG V K G    S +  V N+L+++YG+CG D+D   +VFD I  RD VSWNSMI
Sbjct: 85  LGKQIHGHVFKFGQALPSSAAAVANSLVNMYGKCG-DIDDARRVFDEISHRDDVSWNSMI 143

Query: 57  NALCKYEEWLLALEAFRIM 1
            A C++E+W L++  FR+M
Sbjct: 144 AAACRFEKWELSIHLFRLM 162


>emb|CBI27235.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  145 bits (367), Expect = 4e-33
 Identities = 79/172 (45%), Positives = 105/172 (61%), Gaps = 20/172 (11%)
 Frame = -2

Query: 456 IQNPSP-PLIGKLCEPTSSDIRSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNF 280
           IQ P+  PL  K     +S  RS  SW+++LRS+ RSN FREAI+T++EM  SG  PDNF
Sbjct: 34  IQKPTASPLTSKTPPKPTSPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNF 93

Query: 279 AFPAVLKAATALQDLDLGKQIHGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVF---- 112
           AFPAVLKA + LQDL  G+QIH + VK GY S SVTV NTL+++YG+CG   D+ F    
Sbjct: 94  AFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNA 153

Query: 111 ---------------KVFDRIPQRDQVSWNSMINALCKYEEWLLALEAFRIM 1
                           +F+    RD VSWN+MI++  + + +  AL  FR+M
Sbjct: 154 LMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLM 205



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 38/118 (32%), Positives = 59/118 (50%)
 Frame = -2

Query: 396 RSKHSWIESLRSQARSNSFREAITTFVEMQASGVLPDNFAFPAVLKAATALQDLDLGKQI 217
           R   SW   + S ++S+ F EA+  F  M   GV  D     +VL A + L+ LD+GK+I
Sbjct: 177 RDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEI 236

Query: 216 HGSVVKLGYDSHSVTVCNTLLHLYGRCGDDVDQVFKVFDRIPQRDQVSWNSMINALCK 43
           H  V++      +  V + L+ +Y  C   V+   +VFD I  R    WN+MI+   +
Sbjct: 237 HAYVLRNNDLIENSFVGSALVDMYCNC-RQVESGRRVFDHILGRRIELWNAMISGYAR 293