BLASTX nr result
ID: Rehmannia23_contig00027334
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00027334
(701 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006345495.1| PREDICTED: RNA polymerase sigma factor sigD,... 187 2e-45
ref|XP_004231123.1| PREDICTED: RNA polymerase sigma factor sigD,... 182 7e-44
emb|CBI24961.3| unnamed protein product [Vitis vinifera] 182 7e-44
ref|XP_002272444.1| PREDICTED: RNA polymerase sigma factor rpoD-... 182 7e-44
ref|XP_006482924.1| PREDICTED: RNA polymerase sigma factor sigD,... 168 1e-39
ref|XP_006438958.1| hypothetical protein CICLE_v10033747mg [Citr... 168 1e-39
gb|EXB95293.1| RNA polymerase sigma factor rpoD [Morus notabilis] 167 2e-39
ref|XP_006379084.1| hypothetical protein POPTR_0009s06210g [Popu... 156 7e-36
ref|XP_006379080.1| hypothetical protein POPTR_0009s06210g [Popu... 156 7e-36
ref|XP_004308689.1| PREDICTED: RNA polymerase sigma factor sigD,... 156 7e-36
ref|XP_006399871.1| hypothetical protein EUTSA_v10013654mg [Eutr... 154 3e-35
ref|XP_006851106.1| hypothetical protein AMTR_s00025p00248060 [A... 151 2e-34
gb|EMJ20400.1| hypothetical protein PRUPE_ppa017025mg [Prunus pe... 151 2e-34
ref|NP_196877.1| sigma factor 4 [Arabidopsis thaliana] gi|752165... 151 2e-34
ref|XP_006379082.1| hypothetical protein POPTR_0009s06210g [Popu... 148 2e-33
ref|XP_006379081.1| hypothetical protein POPTR_0009s06210g [Popu... 148 2e-33
ref|XP_006287834.1| hypothetical protein CARUB_v10001054mg [Caps... 148 2e-33
ref|XP_006379083.1| hypothetical protein POPTR_0009s06210g [Popu... 147 2e-33
ref|XP_002517769.1| RNA polymerase sigma factor rpoD, putative [... 145 2e-32
ref|XP_004169825.1| PREDICTED: RNA polymerase sigma factor sigD,... 143 6e-32
>ref|XP_006345495.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
[Solanum tuberosum]
Length = 421
Score = 187 bits (476), Expect = 2e-45
Identities = 105/185 (56%), Positives = 127/185 (68%), Gaps = 3/185 (1%)
Frame = -1
Query: 551 ECVKTDLEDDKFVFVDKKAGKSRFMTPKEEATFSWYLKERARIEGVRT---EMGGQELSS 381
EC+ ++E + K ++T +EEA +SWYLKE ARIE +R E +LSS
Sbjct: 102 ECL--EMEKGDRILNSKPLKTGFYLTHEEEAKYSWYLKEEARIEILRKMVEETSEIDLSS 159
Query: 380 SQWAKAAGISQHKLDKILCNGRESEEKITSSYQRLVVSVASSYQGRGLSLQDLTQEGSIG 201
Q AKAAG+S +LDK+L N +ES++KI Y+ LVVSVA+SYQG+GLSLQDL QEGSIG
Sbjct: 160 KQLAKAAGMSTQRLDKLLINAKESQKKIIQCYRGLVVSVAASYQGKGLSLQDLIQEGSIG 219
Query: 200 LLRGAIKFNPERGNKLSTYAYWWIRQXXXXXXXXXXXXIRLPGSISALVPKICETITVLS 21
LL GA KFNP++G KLSTYAYWWIRQ IRLPGSIS LVPKIC T LS
Sbjct: 220 LLHGAKKFNPKKGYKLSTYAYWWIRQAISRAVANKSRVIRLPGSISELVPKICNANTELS 279
Query: 20 RKLQR 6
RKL+R
Sbjct: 280 RKLRR 284
>ref|XP_004231123.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
[Solanum lycopersicum]
Length = 442
Score = 182 bits (463), Expect = 7e-44
Identities = 109/206 (52%), Positives = 130/206 (63%), Gaps = 24/206 (11%)
Frame = -1
Query: 551 ECVKTDLEDDKFVFVDKKAGKSRFMTPKEEATFSWYLK---------------------E 435
EC++ + ED+ F K G ++T KEEA +SWYLK E
Sbjct: 102 ECLEMEKEDNIFNLKPLKTGF--YLTHKEEAKYSWYLKVNNNVYHRELDAGAESGWVKRE 159
Query: 434 RARIEGVRT---EMGGQELSSSQWAKAAGISQHKLDKILCNGRESEEKITSSYQRLVVSV 264
ARIE +R E +LSS Q AKAAG+S +LDK+L N +ES++KI Y+ LVVSV
Sbjct: 160 EARIEILRKMVEETSEIDLSSKQLAKAAGMSTRRLDKLLINAKESQKKIIQCYRGLVVSV 219
Query: 263 ASSYQGRGLSLQDLTQEGSIGLLRGAIKFNPERGNKLSTYAYWWIRQXXXXXXXXXXXXI 84
A+SYQG+GLSLQDL QEGSIGLL GA KFNP++G KLSTYAYWWIRQ I
Sbjct: 220 AASYQGKGLSLQDLIQEGSIGLLHGAKKFNPKKGYKLSTYAYWWIRQAISRAVANKSRVI 279
Query: 83 RLPGSISALVPKICETITVLSRKLQR 6
RLPGSIS LVPKIC T LSRKL+R
Sbjct: 280 RLPGSISELVPKICNANTELSRKLRR 305
>emb|CBI24961.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 182 bits (463), Expect = 7e-44
Identities = 97/167 (58%), Positives = 117/167 (70%), Gaps = 3/167 (1%)
Frame = -1
Query: 497 AGKSRFMTPKEEATFSWYLKERARIEGVR---TEMGGQELSSSQWAKAAGISQHKLDKIL 327
A +S +TP+EEA F LKE A +E R E E +S+QWA+A GI + LDK+L
Sbjct: 17 AARSAVLTPREEAEFCLCLKEEAGLEAARRRIAETREHEPTSNQWAEAVGIKRSSLDKML 76
Query: 326 CNGRESEEKITSSYQRLVVSVASSYQGRGLSLQDLTQEGSIGLLRGAIKFNPERGNKLST 147
CNGRES E+I SY+RLVVS+A+ YQG+GLSLQDL QEGSIGLLRGA +F+P+RG KLST
Sbjct: 77 CNGRESRERINQSYRRLVVSIAARYQGKGLSLQDLIQEGSIGLLRGAERFDPDRGYKLST 136
Query: 146 YAYWWIRQXXXXXXXXXXXXIRLPGSISALVPKICETITVLSRKLQR 6
Y YWWIRQ IRLPGSI +V KI E TVLSR+L+R
Sbjct: 137 YVYWWIRQAIVRAIANKSRIIRLPGSICEMVAKIAEARTVLSRRLRR 183
>ref|XP_002272444.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
Length = 426
Score = 182 bits (463), Expect = 7e-44
Identities = 97/167 (58%), Positives = 117/167 (70%), Gaps = 3/167 (1%)
Frame = -1
Query: 497 AGKSRFMTPKEEATFSWYLKERARIEGVR---TEMGGQELSSSQWAKAAGISQHKLDKIL 327
A +S +TP+EEA F LKE A +E R E E +S+QWA+A GI + LDK+L
Sbjct: 124 AARSAVLTPREEAEFCLCLKEEAGLEAARRRIAETREHEPTSNQWAEAVGIKRSSLDKML 183
Query: 326 CNGRESEEKITSSYQRLVVSVASSYQGRGLSLQDLTQEGSIGLLRGAIKFNPERGNKLST 147
CNGRES E+I SY+RLVVS+A+ YQG+GLSLQDL QEGSIGLLRGA +F+P+RG KLST
Sbjct: 184 CNGRESRERINQSYRRLVVSIAARYQGKGLSLQDLIQEGSIGLLRGAERFDPDRGYKLST 243
Query: 146 YAYWWIRQXXXXXXXXXXXXIRLPGSISALVPKICETITVLSRKLQR 6
Y YWWIRQ IRLPGSI +V KI E TVLSR+L+R
Sbjct: 244 YVYWWIRQAIVRAIANKSRIIRLPGSICEMVAKIAEARTVLSRRLRR 290
>ref|XP_006482924.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
[Citrus sinensis]
Length = 436
Score = 168 bits (426), Expect = 1e-39
Identities = 94/183 (51%), Positives = 119/183 (65%), Gaps = 14/183 (7%)
Frame = -1
Query: 512 FVDKKAGK-----------SRFMTPKEEATFSWYLKERARIEGVRTEMGG---QELSSSQ 375
F+DK+ G+ + ++TP EEA + LKE A++E R + E S Q
Sbjct: 118 FLDKENGELDYNLVKCKTSNLYLTPSEEAEICYSLKEGAKLEEARKTVAQAEEHESISKQ 177
Query: 374 WAKAAGISQHKLDKILCNGRESEEKITSSYQRLVVSVASSYQGRGLSLQDLTQEGSIGLL 195
AKA G+ Q K+DKILC RES+E+I SY+ LVVS+A+ YQG+GLSL+DL QEGSIGLL
Sbjct: 178 LAKATGMKQSKVDKILCKERESQERIIRSYRSLVVSIATGYQGKGLSLKDLIQEGSIGLL 237
Query: 194 RGAIKFNPERGNKLSTYAYWWIRQXXXXXXXXXXXXIRLPGSISALVPKICETITVLSRK 15
RGA +FNPERG KLSTY YWWI+Q IRLPGS+S +V KI E VLSR+
Sbjct: 238 RGAKRFNPERGYKLSTYVYWWIKQAIIRTIANKSRTIRLPGSMSGMVAKIAEANNVLSRR 297
Query: 14 LQR 6
L+R
Sbjct: 298 LRR 300
>ref|XP_006438958.1| hypothetical protein CICLE_v10033747mg [Citrus clementina]
gi|557541154|gb|ESR52198.1| hypothetical protein
CICLE_v10033747mg [Citrus clementina]
Length = 436
Score = 168 bits (426), Expect = 1e-39
Identities = 94/183 (51%), Positives = 119/183 (65%), Gaps = 14/183 (7%)
Frame = -1
Query: 512 FVDKKAGK-----------SRFMTPKEEATFSWYLKERARIEGVRTEMGG---QELSSSQ 375
F+DK+ G+ + ++TP EEA + LKE A++E R + E S Q
Sbjct: 118 FLDKENGELDYNLVKCKTSNLYLTPSEEAEICYSLKEGAKLEEARKTVAQAEEHESISKQ 177
Query: 374 WAKAAGISQHKLDKILCNGRESEEKITSSYQRLVVSVASSYQGRGLSLQDLTQEGSIGLL 195
AKA G+ Q K+DKILC RES+E+I SY+ LVVS+A+ YQG+GLSL+DL QEGSIGLL
Sbjct: 178 LAKATGMKQSKVDKILCKERESQERIIRSYRSLVVSIATGYQGKGLSLKDLIQEGSIGLL 237
Query: 194 RGAIKFNPERGNKLSTYAYWWIRQXXXXXXXXXXXXIRLPGSISALVPKICETITVLSRK 15
RGA +FNPERG KLSTY YWWI+Q IRLPGS+S +V KI E VLSR+
Sbjct: 238 RGAKRFNPERGYKLSTYVYWWIKQAIIRTIANKSRTIRLPGSMSGMVAKIAEANNVLSRR 297
Query: 14 LQR 6
L+R
Sbjct: 298 LRR 300
>gb|EXB95293.1| RNA polymerase sigma factor rpoD [Morus notabilis]
Length = 422
Score = 167 bits (424), Expect = 2e-39
Identities = 89/183 (48%), Positives = 121/183 (66%), Gaps = 3/183 (1%)
Frame = -1
Query: 542 KTDLEDDKFVFVDKKAGKSRFMTPKEEATFSWYLKERARIEGVRTEMGGQE---LSSSQW 372
K+D ED +F K G +++P+EEA LKE A++E R M E +S +
Sbjct: 105 KSDGEDMRFSIGPMKLG---YLSPREEAECCLILKEGAKLEATRLRMTNSEDHEPTSKEL 161
Query: 371 AKAAGISQHKLDKILCNGRESEEKITSSYQRLVVSVASSYQGRGLSLQDLTQEGSIGLLR 192
AKA G+ +DK+LC+ RES+E+I+ SY+RLVVSVA+ YQG+GLS DL QEGS+GLLR
Sbjct: 162 AKAMGMEMRSIDKMLCDKRESQERISRSYRRLVVSVAAGYQGKGLSFPDLIQEGSVGLLR 221
Query: 191 GAIKFNPERGNKLSTYAYWWIRQXXXXXXXXXXXXIRLPGSISALVPKICETITVLSRKL 12
GA KF+P+RGNKLSTY YWWIRQ +RLPG++ +V K+ E VL+++L
Sbjct: 222 GAQKFDPQRGNKLSTYVYWWIRQAIIRAIENKSRVVRLPGNMCGIVAKVTEANNVLNKRL 281
Query: 11 QRF 3
+RF
Sbjct: 282 RRF 284
>ref|XP_006379084.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
gi|550331146|gb|ERP56881.1| hypothetical protein
POPTR_0009s06210g [Populus trichocarpa]
Length = 423
Score = 156 bits (394), Expect = 7e-36
Identities = 88/165 (53%), Positives = 109/165 (66%), Gaps = 3/165 (1%)
Frame = -1
Query: 491 KSRFMTPKEEATFSWYLKERARIEGVRTEMGG-QEL--SSSQWAKAAGISQHKLDKILCN 321
K +++PKEEA FS LK ARIE R +G QEL +S Q AKA + ++ +D +LC
Sbjct: 122 KRGYLSPKEEAEFSMCLKHEARIEAARRRIGEVQELDPTSKQLAKALRMEKNSVDNVLCK 181
Query: 320 GRESEEKITSSYQRLVVSVASSYQGRGLSLQDLTQEGSIGLLRGAIKFNPERGNKLSTYA 141
GRES EKI SY+RLVVS+A+SYQ +GLSLQDL QEGSIGLLRGA +F+P+RG KLSTY
Sbjct: 182 GRESREKIIRSYRRLVVSIATSYQDKGLSLQDLIQEGSIGLLRGAERFDPQRGYKLSTYV 241
Query: 140 YWWIRQXXXXXXXXXXXXIRLPGSISALVPKICETITVLSRKLQR 6
YWWI++ +RLP LV KI LS KL+R
Sbjct: 242 YWWIKEAILTAISNNTRMVRLPRRWWMLVAKIAGANNDLSNKLRR 286
>ref|XP_006379080.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
gi|550331142|gb|ERP56877.1| hypothetical protein
POPTR_0009s06210g [Populus trichocarpa]
Length = 331
Score = 156 bits (394), Expect = 7e-36
Identities = 88/165 (53%), Positives = 109/165 (66%), Gaps = 3/165 (1%)
Frame = -1
Query: 491 KSRFMTPKEEATFSWYLKERARIEGVRTEMGG-QEL--SSSQWAKAAGISQHKLDKILCN 321
K +++PKEEA FS LK ARIE R +G QEL +S Q AKA + ++ +D +LC
Sbjct: 122 KRGYLSPKEEAEFSMCLKHEARIEAARRRIGEVQELDPTSKQLAKALRMEKNSVDNVLCK 181
Query: 320 GRESEEKITSSYQRLVVSVASSYQGRGLSLQDLTQEGSIGLLRGAIKFNPERGNKLSTYA 141
GRES EKI SY+RLVVS+A+SYQ +GLSLQDL QEGSIGLLRGA +F+P+RG KLSTY
Sbjct: 182 GRESREKIIRSYRRLVVSIATSYQDKGLSLQDLIQEGSIGLLRGAERFDPQRGYKLSTYV 241
Query: 140 YWWIRQXXXXXXXXXXXXIRLPGSISALVPKICETITVLSRKLQR 6
YWWI++ +RLP LV KI LS KL+R
Sbjct: 242 YWWIKEAILTAISNNTRMVRLPRRWWMLVAKIAGANNDLSNKLRR 286
>ref|XP_004308689.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 452
Score = 156 bits (394), Expect = 7e-36
Identities = 90/180 (50%), Positives = 113/180 (62%), Gaps = 3/180 (1%)
Frame = -1
Query: 536 DLEDDKFVFVDKKAGKSRFMTPKEEATFSWYLKERARIEGVRT---EMGGQELSSSQWAK 366
+LED +F F G +++P+EEA LKE A++E RT E E +S Q A
Sbjct: 140 ELEDGRFSFGVVSYG---YLSPREEADCCMSLKEGAKLESERTRFTEAQEHEPTSKQLAN 196
Query: 365 AAGISQHKLDKILCNGRESEEKITSSYQRLVVSVASSYQGRGLSLQDLTQEGSIGLLRGA 186
A I +DK++CN RES+E+I SY+ LVVSVASSYQG+GLSLQDL QEGSIGLLRGA
Sbjct: 197 AMRIKMSSIDKVICNRRESQERIIKSYRGLVVSVASSYQGKGLSLQDLIQEGSIGLLRGA 256
Query: 185 IKFNPERGNKLSTYAYWWIRQXXXXXXXXXXXXIRLPGSISALVPKICETITVLSRKLQR 6
KF+PERG KLSTY YWWIRQ IRLPG + ++ KI +++ QR
Sbjct: 257 EKFDPERGLKLSTYVYWWIRQAIIRAIENKSRIIRLPGHMCGVMAKITRAKKNFNQRFQR 316
>ref|XP_006399871.1| hypothetical protein EUTSA_v10013654mg [Eutrema salsugineum]
gi|557100961|gb|ESQ41324.1| hypothetical protein
EUTSA_v10013654mg [Eutrema salsugineum]
Length = 421
Score = 154 bits (388), Expect = 3e-35
Identities = 81/170 (47%), Positives = 108/170 (63%)
Frame = -1
Query: 515 VFVDKKAGKSRFMTPKEEATFSWYLKERARIEGVRTEMGGQELSSSQWAKAAGISQHKLD 336
+ V A +S F++ EE YLKE A++E V T + E+ S + G + +
Sbjct: 113 ISVPVAASRSGFLSRLEEVQLCLYLKEGAKLENVGTSVEENEIVSVLLSSGKGKKKRSAN 172
Query: 335 KILCNGRESEEKITSSYQRLVVSVASSYQGRGLSLQDLTQEGSIGLLRGAIKFNPERGNK 156
+ILC RE+ EKIT Y+RLVVS+A+ YQG+GL+LQDL QEGSIGLLRGA +F+PERG K
Sbjct: 173 EILCRRREAREKITRCYRRLVVSIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPERGYK 232
Query: 155 LSTYAYWWIRQXXXXXXXXXXXXIRLPGSISALVPKICETITVLSRKLQR 6
LSTY YWWI+Q ++LPGS+ L K+ E VL+RKL+R
Sbjct: 233 LSTYVYWWIKQAILRAIAHKSRLVKLPGSMWELTAKVAEASNVLTRKLKR 282
>ref|XP_006851106.1| hypothetical protein AMTR_s00025p00248060 [Amborella trichopoda]
gi|548854777|gb|ERN12687.1| hypothetical protein
AMTR_s00025p00248060 [Amborella trichopoda]
Length = 449
Score = 151 bits (382), Expect = 2e-34
Identities = 80/170 (47%), Positives = 110/170 (64%), Gaps = 3/170 (1%)
Frame = -1
Query: 506 DKKAGKSRFMTPKEEATFSWYLKERARIEGVRT---EMGGQELSSSQWAKAAGISQHKLD 336
+K + ++T +EEA FS L+E AR+EG+R E G+E S QWA+A G+ + ++
Sbjct: 142 EKSSSSEDYLTRREEAEFSLCLREGARLEGIRRKLREKRGREPSRGQWAEAVGMRESSME 201
Query: 335 KILCNGRESEEKITSSYQRLVVSVASSYQGRGLSLQDLTQEGSIGLLRGAIKFNPERGNK 156
+ L RE +IT+SY+RLVVS+A+SY G+G+SL DL QEGS+GLLRGA +F+ RG K
Sbjct: 202 RRLGIARECRNRITNSYRRLVVSIATSYPGKGMSLSDLIQEGSLGLLRGAERFDHRRGYK 261
Query: 155 LSTYAYWWIRQXXXXXXXXXXXXIRLPGSISALVPKICETITVLSRKLQR 6
LSTY YWWI+Q +RLPGS+ A V K+ E VL +L R
Sbjct: 262 LSTYVYWWIKQAIIKAIATKSRIVRLPGSMCATVAKVSEASGVLMSRLGR 311
>gb|EMJ20400.1| hypothetical protein PRUPE_ppa017025mg [Prunus persica]
Length = 440
Score = 151 bits (381), Expect = 2e-34
Identities = 92/187 (49%), Positives = 114/187 (60%), Gaps = 5/187 (2%)
Frame = -1
Query: 551 ECVKTDLEDD--KFVFVDKKAGKSRFMTPKEEATFSWYLKERARIEGVR---TEMGGQEL 387
E +K D+ED F FV + ++P+EEA LKE AR+E R E E
Sbjct: 123 EEMKRDVEDGMVSFGFV-----RYEHLSPREEAECCLSLKEGARLESERFRVVEAQKHEP 177
Query: 386 SSSQWAKAAGISQHKLDKILCNGRESEEKITSSYQRLVVSVASSYQGRGLSLQDLTQEGS 207
+S Q AKA G+ +DK+LC RES+EKI SY+ LVVSVASSYQG+GLS QDL QEGS
Sbjct: 178 TSKQLAKAMGMKMRSIDKVLCKRRESQEKIIRSYRGLVVSVASSYQGKGLSFQDLIQEGS 237
Query: 206 IGLLRGAIKFNPERGNKLSTYAYWWIRQXXXXXXXXXXXXIRLPGSISALVPKICETITV 27
IGLLRGA KF+ ER KLSTY YWWIRQ IRLPG + ++ KI +
Sbjct: 238 IGLLRGAEKFDHEREWKLSTYVYWWIRQAIIRAIENKSRIIRLPGHVCGMMAKITKAQNS 297
Query: 26 LSRKLQR 6
L+++ QR
Sbjct: 298 LNQRFQR 304
>ref|NP_196877.1| sigma factor 4 [Arabidopsis thaliana]
gi|75216509|sp|Q9ZSL6.1|SIGD_ARATH RecName: Full=RNA
polymerase sigma factor sigD, chloroplastic; Short=Sigma
factor D; Short=Sigma-D; AltName: Full=RNA polymerase
sigma factor sig4; Short=Atsig4; Short=Sigma factor 4;
Flags: Precursor gi|3983260|gb|AAC97954.1| sigma-like
factor [Arabidopsis thaliana] gi|4972296|dbj|BAA78110.1|
RNA polymerase sigma subunit SigD [Arabidopsis thaliana]
gi|9758039|dbj|BAB08700.1| sigma-like factor
[Arabidopsis thaliana] gi|332004550|gb|AED91933.1| sigma
factor 4 [Arabidopsis thaliana]
Length = 419
Score = 151 bits (381), Expect = 2e-34
Identities = 78/164 (47%), Positives = 106/164 (64%)
Frame = -1
Query: 497 AGKSRFMTPKEEATFSWYLKERARIEGVRTEMGGQELSSSQWAKAAGISQHKLDKILCNG 318
A +S F++ EE YLKE A++E + T + E+ S A G + ++ILC
Sbjct: 117 ASRSGFLSRLEEVQLCLYLKEGAKLENLGTSVEENEMVSVLLASGRGKKKRSANEILCRR 176
Query: 317 RESEEKITSSYQRLVVSVASSYQGRGLSLQDLTQEGSIGLLRGAIKFNPERGNKLSTYAY 138
+E+ EKIT Y+RLVVS+A+ YQG+GL+LQDL QEGSIGLLRGA +F+P+RG KLSTY Y
Sbjct: 177 KEAREKITRCYRRLVVSIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPDRGYKLSTYVY 236
Query: 137 WWIRQXXXXXXXXXXXXIRLPGSISALVPKICETITVLSRKLQR 6
WWI+Q ++LPGS+ L K+ E VL+RKL+R
Sbjct: 237 WWIKQAILRAIAHKSRLVKLPGSMWELTAKVAEASNVLTRKLRR 280
>ref|XP_006379082.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
gi|550331144|gb|ERP56879.1| hypothetical protein
POPTR_0009s06210g [Populus trichocarpa]
Length = 284
Score = 148 bits (373), Expect = 2e-33
Identities = 79/142 (55%), Positives = 99/142 (69%), Gaps = 3/142 (2%)
Frame = -1
Query: 491 KSRFMTPKEEATFSWYLKERARIEGVRTEMGG-QEL--SSSQWAKAAGISQHKLDKILCN 321
K +++PKEEA FS LK ARIE R +G QEL +S Q AKA + ++ +D +LC
Sbjct: 122 KRGYLSPKEEAEFSMCLKHEARIEAARRRIGEVQELDPTSKQLAKALRMEKNSVDNVLCK 181
Query: 320 GRESEEKITSSYQRLVVSVASSYQGRGLSLQDLTQEGSIGLLRGAIKFNPERGNKLSTYA 141
GRES EKI SY+RLVVS+A+SYQ +GLSLQDL QEGSIGLLRGA +F+P+RG KLSTY
Sbjct: 182 GRESREKIIRSYRRLVVSIATSYQDKGLSLQDLIQEGSIGLLRGAERFDPQRGYKLSTYV 241
Query: 140 YWWIRQXXXXXXXXXXXXIRLP 75
YWWI++ +RLP
Sbjct: 242 YWWIKEAILTAISNNTRMVRLP 263
>ref|XP_006379081.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
gi|550331143|gb|ERP56878.1| hypothetical protein
POPTR_0009s06210g [Populus trichocarpa]
Length = 276
Score = 148 bits (373), Expect = 2e-33
Identities = 79/142 (55%), Positives = 99/142 (69%), Gaps = 3/142 (2%)
Frame = -1
Query: 491 KSRFMTPKEEATFSWYLKERARIEGVRTEMGG-QEL--SSSQWAKAAGISQHKLDKILCN 321
K +++PKEEA FS LK ARIE R +G QEL +S Q AKA + ++ +D +LC
Sbjct: 122 KRGYLSPKEEAEFSMCLKHEARIEAARRRIGEVQELDPTSKQLAKALRMEKNSVDNVLCK 181
Query: 320 GRESEEKITSSYQRLVVSVASSYQGRGLSLQDLTQEGSIGLLRGAIKFNPERGNKLSTYA 141
GRES EKI SY+RLVVS+A+SYQ +GLSLQDL QEGSIGLLRGA +F+P+RG KLSTY
Sbjct: 182 GRESREKIIRSYRRLVVSIATSYQDKGLSLQDLIQEGSIGLLRGAERFDPQRGYKLSTYV 241
Query: 140 YWWIRQXXXXXXXXXXXXIRLP 75
YWWI++ +RLP
Sbjct: 242 YWWIKEAILTAISNNTRMVRLP 263
>ref|XP_006287834.1| hypothetical protein CARUB_v10001054mg [Capsella rubella]
gi|482556540|gb|EOA20732.1| hypothetical protein
CARUB_v10001054mg [Capsella rubella]
Length = 419
Score = 148 bits (373), Expect = 2e-33
Identities = 76/164 (46%), Positives = 105/164 (64%)
Frame = -1
Query: 497 AGKSRFMTPKEEATFSWYLKERARIEGVRTEMGGQELSSSQWAKAAGISQHKLDKILCNG 318
A +S F++ EE YLKE A++E + T E+ S + G + ++ILC
Sbjct: 117 ASRSGFLSRLEEVQLCLYLKEGAKLENLGTSAQENEMVSVLLSSGKGKKKRSANEILCRR 176
Query: 317 RESEEKITSSYQRLVVSVASSYQGRGLSLQDLTQEGSIGLLRGAIKFNPERGNKLSTYAY 138
+E+ EKIT Y+RLVVS+A+ YQG+GL+LQDL QEGSIGLLRGA +F+P+RG KLSTY Y
Sbjct: 177 KEAREKITRCYRRLVVSIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPDRGYKLSTYVY 236
Query: 137 WWIRQXXXXXXXXXXXXIRLPGSISALVPKICETITVLSRKLQR 6
WWI+Q ++LPGS+ L ++ E VL+RKL+R
Sbjct: 237 WWIKQAILRAIAHKSRLVKLPGSMWELTARVAEASNVLTRKLRR 280
>ref|XP_006379083.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
gi|550331145|gb|ERP56880.1| hypothetical protein
POPTR_0009s06210g [Populus trichocarpa]
Length = 419
Score = 147 bits (372), Expect = 2e-33
Identities = 86/165 (52%), Positives = 106/165 (64%), Gaps = 3/165 (1%)
Frame = -1
Query: 491 KSRFMTPKEEATFSWYLKERARIEGVRTEMGG-QEL--SSSQWAKAAGISQHKLDKILCN 321
K +++PKEEA FS LK ARIE R +G QEL +S Q AKA + ++ +D +LC
Sbjct: 122 KRGYLSPKEEAEFSMCLKHEARIEAARRRIGEVQELDPTSKQLAKALRMEKNSVDNVLCK 181
Query: 320 GRESEEKITSSYQRLVVSVASSYQGRGLSLQDLTQEGSIGLLRGAIKFNPERGNKLSTYA 141
GRES EKI SY+RLVVS+A+SYQ +GLSLQDL QEGSIGLLRGA +F+P+RG KLSTY
Sbjct: 182 GRESREKIIRSYRRLVVSIATSYQDKGLSLQDLIQEGSIGLLRGAERFDPQRGYKLSTYV 241
Query: 140 YWWIRQXXXXXXXXXXXXIRLPGSISALVPKICETITVLSRKLQR 6
YWWI++ R LV KI LS KL+R
Sbjct: 242 YWWIKEAILTAISNNTRMRRW----WMLVAKIAGANNDLSNKLRR 282
>ref|XP_002517769.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
gi|223543041|gb|EEF44576.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 389
Score = 145 bits (365), Expect = 2e-32
Identities = 82/187 (43%), Positives = 116/187 (62%), Gaps = 4/187 (2%)
Frame = -1
Query: 554 LECVKTDLE-DDKFVFVDKKAGKSRFMTPKEEATFSWYLKERARIEGVR---TEMGGQEL 387
+EC+K + E DD+ + + +++ EEA F LK+ AR+E R E E
Sbjct: 91 IECLKVEEERDDQCEGALFQPVNNGYLSSIEEAEFCLCLKDHARVEAARRRIAETQEHEP 150
Query: 386 SSSQWAKAAGISQHKLDKILCNGRESEEKITSSYQRLVVSVASSYQGRGLSLQDLTQEGS 207
+S Q A+A + + +DKILC GR+S E+IT +Y+RLV+S+A+ Y+G+GLSLQDL QEGS
Sbjct: 151 TSKQLAEALRMRKKNVDKILCKGRQSRERITGNYRRLVLSIANRYRGKGLSLQDLIQEGS 210
Query: 206 IGLLRGAIKFNPERGNKLSTYAYWWIRQXXXXXXXXXXXXIRLPGSISALVPKICETITV 27
IGLLRGA +F+P+RGNKLSTY YWWI++ +R P S+ KI E
Sbjct: 211 IGLLRGAERFDPKRGNKLSTYVYWWIKEAIITSISINSRIVRQPRSLWDRTTKIAEAKIS 270
Query: 26 LSRKLQR 6
L+ +L R
Sbjct: 271 LTERLGR 277
>ref|XP_004169825.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
[Cucumis sativus]
Length = 341
Score = 143 bits (360), Expect = 6e-32
Identities = 76/162 (46%), Positives = 101/162 (62%), Gaps = 3/162 (1%)
Frame = -1
Query: 482 FMTPKEEATFSWYLKERARIEGVRT---EMGGQELSSSQWAKAAGISQHKLDKILCNGRE 312
+++PKEEA LKE +E V+T E E ++ Q A A G +D+ILC RE
Sbjct: 44 YLSPKEEAELCLCLKEAVLLENVKTRIMETQEHEPTNKQLAIAMGTKSGCIDRILCRARE 103
Query: 311 SEEKITSSYQRLVVSVASSYQGRGLSLQDLTQEGSIGLLRGAIKFNPERGNKLSTYAYWW 132
S +++ Y +LV+S+A+ YQG+GLSLQDLTQEG+IGLL+GA +F P RG+KLSTYAYWW
Sbjct: 104 SRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWW 163
Query: 131 IRQXXXXXXXXXXXXIRLPGSISALVPKICETITVLSRKLQR 6
IRQ +RLPG + +V +I E L KL R
Sbjct: 164 IRQAIIRALDKKSRLVRLPGHMGQMVARIAEENNHLGIKLSR 205