BLASTX nr result

ID: Rehmannia23_contig00027258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00027258
         (551 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30061.3| unnamed protein product [Vitis vinifera]               57   3e-06
ref|XP_002274792.2| PREDICTED: uncharacterized protein LOC100241...    57   4e-06
emb|CAN64891.1| hypothetical protein VITISV_016440 [Vitis vinifera]    55   9e-06

>emb|CBI30061.3| unnamed protein product [Vitis vinifera]
          Length = 381

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 51/224 (22%), Positives = 88/224 (39%), Gaps = 43/224 (19%)
 Frame = +2

Query: 8   TGWGDDEETF----EVPANQDDANYGDSWGQNWE--------------WGNSCNNMAASG 133
           TGWGD EE      ++P+     ++  +    WE              WGN+   + A+G
Sbjct: 155 TGWGDAEEDIGKAADIPSGPGLWHHNQNVDNPWELSCTQNKGPVEATGWGNTNEPVKATG 214

Query: 134 WPDCNNNNNTWQYSD-----------GSGHGYMS---WEGGWNNDWGWSYADNNFNYVGP 271
           W + N       + D           G  +G M    W+ GWNN  GW+  +N +N +  
Sbjct: 215 WGNSNEPVKATGWGDWDHQPVEATGWGDYYGAMEVPIWKDGWNNSSGWNQYENKYNDLEN 274

Query: 272 VVEEQ--GMWNESNVRTTADAXXXXXXXXXXXXXQANEHCMNNMSRTNRG-RHKGPYRGN 442
           + + +  G+W   N  +  +                +    +N  + +RG R  G  R N
Sbjct: 275 LKDRRAGGVWGTGNGNSRGE-------EVGYMSRYRSSRFHDNEYQADRGWRSGGRKRAN 327

Query: 443 --------KDKRSTSREWKSINSCGGPVGQRAAIRDGQAWNREK 550
                    DK++ S+   +I+ C GPV    + + G +W+ +K
Sbjct: 328 FLFDEGSFLDKKAASQPRNTIHHC-GPVSHHGSGKAGNSWSWKK 370


>ref|XP_002274792.2| PREDICTED: uncharacterized protein LOC100241733 [Vitis vinifera]
          Length = 257

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 51/225 (22%), Positives = 88/225 (39%), Gaps = 44/225 (19%)
 Frame = +2

Query: 8   TGWGDDEETF----EVPANQDDANYGDSWGQNWE---------------WGNSCNNMAAS 130
           TGWGD EE      ++P+     ++  +    WE               WGN+   + A+
Sbjct: 38  TGWGDAEEDIGKAADIPSGPGLWHHNQNVDNPWELSCTQNKGAPVEATGWGNTNEPVKAT 97

Query: 131 GWPDCNNNNNTWQYSD-----------GSGHGYMS---WEGGWNNDWGWSYADNNFNYVG 268
           GW + N       + D           G  +G M    W+ GWNN  GW+  +N +N + 
Sbjct: 98  GWGNSNEPVKATGWGDWDHQPVEATGWGDYYGAMEVPIWKDGWNNSSGWNQYENKYNDLE 157

Query: 269 PVVEEQ--GMWNESNVRTTADAXXXXXXXXXXXXXQANEHCMNNMSRTNRG-RHKGPYRG 439
            + + +  G+W   N  +  +                +    +N  + +RG R  G  R 
Sbjct: 158 NLKDRRAGGVWGTGNGNSRGE-------EVGYMSRYRSSRFHDNEYQADRGWRSGGRKRA 210

Query: 440 N--------KDKRSTSREWKSINSCGGPVGQRAAIRDGQAWNREK 550
           N         DK++ S+   +I+ C GPV    + + G +W+ +K
Sbjct: 211 NFLFDEGSFLDKKAASQPRNTIHHC-GPVSHHGSGKAGNSWSWKK 254


>emb|CAN64891.1| hypothetical protein VITISV_016440 [Vitis vinifera]
          Length = 1088

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 49/187 (26%), Positives = 75/187 (40%), Gaps = 25/187 (13%)
 Frame = +2

Query: 8   TGWGDDEETFEVPANQD--DANYGDSWGQNWE------WGNSCNNMAASGWPDCNNNN-- 157
           TGWGD EE  E     D  +      WG   E      WGNS   + A+GW D ++    
Sbjct: 201 TGWGDSEEPVEATGWGDCGEPVEATGWGNTNEPVKATGWGNSNEPVKATGWGDWDHQPVE 260

Query: 158 -NTWQYSDGSGHGYMS---WEGGWNNDWGWSYADNNFNYVGPVVEEQ--GMWNESNVRTT 319
              W    G  +G M    W+ GWNN  GW+  +N +N +  + + +  G+W   N  + 
Sbjct: 261 ATGW----GDYYGTMEVPIWKDGWNNSSGWNQYENKYNDLENLKDRRAGGVWGTGNGNSR 316

Query: 320 ADAXXXXXXXXXXXXXQANEHCMNNMSRTNRG-RHKGPYRGN--------KDKRSTSREW 472
            +                +    +N  + +RG R  G  R N         DK++ S+  
Sbjct: 317 GE-------EVGYMSRYRSSRFHDNEYQADRGWRSGGRKRANFLFDEGSFLDKKAASQPR 369

Query: 473 KSINSCG 493
            +I+ CG
Sbjct: 370 NTIHHCG 376


Top