BLASTX nr result
ID: Rehmannia23_contig00027231
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00027231
(832 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002303480.2| pentatricopeptide repeat-containing family p... 192 2e-46
ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containi... 189 1e-45
emb|CBI29222.3| unnamed protein product [Vitis vinifera] 189 1e-45
ref|XP_006432869.1| hypothetical protein CICLE_v10000274mg [Citr... 188 2e-45
ref|XP_004249905.1| PREDICTED: pentatricopeptide repeat-containi... 187 4e-45
ref|XP_006351033.1| PREDICTED: pentatricopeptide repeat-containi... 183 6e-44
gb|EMJ18352.1| hypothetical protein PRUPE_ppa001463mg [Prunus pe... 176 9e-42
ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containi... 161 2e-37
gb|EOY25407.1| Tetratricopeptide repeat-like superfamily protein... 158 2e-36
gb|AHB18408.1| pentatricopeptide repeat-containing protein [Goss... 157 6e-36
ref|XP_003548529.2| PREDICTED: pentatricopeptide repeat-containi... 145 2e-32
ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arab... 133 7e-29
sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-c... 132 1e-28
emb|CAA18631.1| putative protein [Arabidopsis thaliana] gi|72687... 132 1e-28
ref|NP_567587.1| pentatricopeptide repeat-containing protein [Ar... 132 1e-28
ref|XP_004509525.1| PREDICTED: pentatricopeptide repeat-containi... 130 6e-28
ref|XP_006413978.1| hypothetical protein EUTSA_v10024401mg [Eutr... 125 1e-26
ref|XP_006282558.1| hypothetical protein CARUB_v10004123mg [Caps... 125 2e-26
gb|ESW28323.1| hypothetical protein PHAVU_003G277400g [Phaseolus... 125 2e-26
ref|XP_003628993.1| Pentatricopeptide repeat-containing protein ... 119 1e-24
>ref|XP_002303480.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550342907|gb|EEE78459.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 842
Score = 192 bits (487), Expect = 2e-46
Identities = 118/253 (46%), Positives = 150/253 (59%)
Frame = -2
Query: 765 MDMRRLTVHKXXXXXXXXXXXAVLFLPIKRPLTVSPHPLQKLQNPRPEPLEVGPSNIEAT 586
MDMRRLT+ K P+KRPLT LQK P+ P + T
Sbjct: 5 MDMRRLTITKPIFIQS----------PLKRPLTCITTTLQKQHQIHPQAPP--PPPLLQT 52
Query: 585 PPAPAAFDQSFQYKKCVSSILSCPNLNSCQCKDLLTHLTPHQFDSHFWEIHKYVDPSTAL 406
P A +QS K VS ILS P+L+ +CK+L+ HL+P +FDS F + V+P TAL
Sbjct: 53 QTNPQALNQSLL--KRVSLILSNPSLDCAKCKELVPHLSPQEFDSCFLALKSNVNPKTAL 110
Query: 405 KFFYFACNSCGFRFTLISYCVLFHLLVSKNLDSAARLLLIRVIDGKLPITLRDDVVKVHK 226
FF+F +C FRFT SYCVL HLLV +L S ARLLLIR+IDGK+P + H
Sbjct: 111 NFFHFVSETCKFRFTARSYCVLIHLLVGNDLLSPARLLLIRLIDGKVPAFYARNFESRHF 170
Query: 225 EIAVVLVDTCLGSEIFRNGIRGFDILVHVYASEFKSLGFDVAMEVFRILAGRGLVPSFKT 46
EIA ++ D L E G++ D+LVHVY+++FK LGF A +VF +LA +GL PS KT
Sbjct: 171 EIAQIMADFNLVFEPV-IGVKIADLLVHVYSTQFKHLGFGFAADVFSLLAKKGLFPSLKT 229
Query: 45 CNFLMSSLVKAGE 7
C FL+SSLVKA E
Sbjct: 230 CTFLLSSLVKANE 242
>ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 189 bits (480), Expect = 1e-45
Identities = 114/238 (47%), Positives = 149/238 (62%), Gaps = 6/238 (2%)
Frame = -2
Query: 696 LFLPIKRPLT----VSPHPLQKLQNPRPEPLEVGPSNIEATPPAPAAFDQSFQYKKCVSS 529
+F PI RPLT +PHP P PL PS + P + D + K V+S
Sbjct: 81 IFCPIARPLTCVTSAAPHP--------PSPL---PSQNQ-----PPSSDHALL--KSVTS 122
Query: 528 ILSCPNLNSCQCKDLLTHLTPHQFDSHFWEIHKYVDPSTALKFFYFACNSCGFRFTLISY 349
ILS P+L+S QCK L+ HL+PHQFDS F+ + + V+P TAL FFYFA +SCGFRFTL SY
Sbjct: 123 ILSNPSLDSTQCKQLIPHLSPHQFDSVFFSVRRNVNPKTALNFFYFASDSCGFRFTLRSY 182
Query: 348 CVLFHLLVSKNLDSAARLLLIRVIDGKLPITLRDDVVKVHKEIAVVLVDTCLGSEIFRNG 169
CVL L+ S ARLLLIR+ID KLP+ L D H EIA + D +E+ +G
Sbjct: 183 CVLMRSLIVSGFVSPARLLLIRLIDRKLPV-LFGDPKNRHIEIASAMADL---NEVGESG 238
Query: 168 --IRGFDILVHVYASEFKSLGFDVAMEVFRILAGRGLVPSFKTCNFLMSSLVKAGEPE 1
+ D+L+HVY ++F+++GF A+ VFR LA +G+ P+ KTC FL+SSLVKA E E
Sbjct: 239 VAVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELE 296
>emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 189 bits (480), Expect = 1e-45
Identities = 114/238 (47%), Positives = 149/238 (62%), Gaps = 6/238 (2%)
Frame = -2
Query: 696 LFLPIKRPLT----VSPHPLQKLQNPRPEPLEVGPSNIEATPPAPAAFDQSFQYKKCVSS 529
+F PI RPLT +PHP P PL PS + P + D + K V+S
Sbjct: 14 IFCPIARPLTCVTSAAPHP--------PSPL---PSQNQ-----PPSSDHALL--KSVTS 55
Query: 528 ILSCPNLNSCQCKDLLTHLTPHQFDSHFWEIHKYVDPSTALKFFYFACNSCGFRFTLISY 349
ILS P+L+S QCK L+ HL+PHQFDS F+ + + V+P TAL FFYFA +SCGFRFTL SY
Sbjct: 56 ILSNPSLDSTQCKQLIPHLSPHQFDSVFFSVRRNVNPKTALNFFYFASDSCGFRFTLRSY 115
Query: 348 CVLFHLLVSKNLDSAARLLLIRVIDGKLPITLRDDVVKVHKEIAVVLVDTCLGSEIFRNG 169
CVL L+ S ARLLLIR+ID KLP+ L D H EIA + D +E+ +G
Sbjct: 116 CVLMRSLIVSGFVSPARLLLIRLIDRKLPV-LFGDPKNRHIEIASAMADL---NEVGESG 171
Query: 168 --IRGFDILVHVYASEFKSLGFDVAMEVFRILAGRGLVPSFKTCNFLMSSLVKAGEPE 1
+ D+L+HVY ++F+++GF A+ VFR LA +G+ P+ KTC FL+SSLVKA E E
Sbjct: 172 VAVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELE 229
>ref|XP_006432869.1| hypothetical protein CICLE_v10000274mg [Citrus clementina]
gi|568835123|ref|XP_006471629.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X1 [Citrus sinensis]
gi|568835125|ref|XP_006471630.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X2 [Citrus sinensis]
gi|557534991|gb|ESR46109.1| hypothetical protein
CICLE_v10000274mg [Citrus clementina]
Length = 833
Score = 188 bits (478), Expect = 2e-45
Identities = 113/253 (44%), Positives = 155/253 (61%)
Frame = -2
Query: 765 MDMRRLTVHKXXXXXXXXXXXAVLFLPIKRPLTVSPHPLQKLQNPRPEPLEVGPSNIEAT 586
MD+RRL++ K L + + RPLT Q+ Q E+ N +
Sbjct: 1 MDLRRLSIPKPCS----------LSIAVSRPLTHVTSTAQQQQ-------ELHNRNQQQQ 43
Query: 585 PPAPAAFDQSFQYKKCVSSILSCPNLNSCQCKDLLTHLTPHQFDSHFWEIHKYVDPSTAL 406
PP P + +QS K VSS+LS +L+ +CK L +L+P +FD+ F+ I V+P TAL
Sbjct: 44 PPPPQSSNQSLL--KWVSSVLSKQSLDPSKCKLFLPNLSPQEFDTLFFSIRSNVNPKTAL 101
Query: 405 KFFYFACNSCGFRFTLISYCVLFHLLVSKNLDSAARLLLIRVIDGKLPITLRDDVVKVHK 226
KFFYFA SC FRFT+ SYC+L LL+ NL S ARLLLIR+IDGK+P+ + H
Sbjct: 102 KFFYFASQSCNFRFTVRSYCLLIRLLLFSNLLSPARLLLIRLIDGKMPVLYASNPSIRHI 161
Query: 225 EIAVVLVDTCLGSEIFRNGIRGFDILVHVYASEFKSLGFDVAMEVFRILAGRGLVPSFKT 46
EIA +VD + SE G++ D+LVHVY ++FK+LGF A++VF I + +G+ PS KT
Sbjct: 162 EIASQMVDLNVTSEP-ALGVQIADLLVHVYCTQFKNLGFGYAIDVFSIFSNKGIFPSLKT 220
Query: 45 CNFLMSSLVKAGE 7
CNFL++SLVKA E
Sbjct: 221 CNFLLNSLVKANE 233
>ref|XP_004249905.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Solanum lycopersicum]
Length = 839
Score = 187 bits (475), Expect = 4e-45
Identities = 116/258 (44%), Positives = 154/258 (59%), Gaps = 5/258 (1%)
Frame = -2
Query: 765 MDMRRLTVHKXXXXXXXXXXXAVLFLPIKRPLTVSPHPLQKLQNPRPEPLEVGPSNIEAT 586
MD+RRL + K +F IKRPLT + Q EPL+ G SN
Sbjct: 1 MDVRRLKIPKTI----------AIFSHIKRPLTCVIYTASSDQIS--EPLQKGDSN---- 44
Query: 585 PPAPAAFDQSFQ-----YKKCVSSILSCPNLNSCQCKDLLTHLTPHQFDSHFWEIHKYVD 421
P P++ + + +K V S+LS P ++S + KDLLT L P QFD+ F EIH +
Sbjct: 45 KPNPSSEKKQIKGLDLNLRKWVVSVLSDPPVDSLKIKDLLTLLNPQQFDAIFLEIHSSLK 104
Query: 420 PSTALKFFYFACNSCGFRFTLISYCVLFHLLVSKNLDSAARLLLIRVIDGKLPITLRDDV 241
P LKFF+ A +C F FT+ SYC L LL++ N D+ ARLLLIR+IDGKLP L D +
Sbjct: 105 PLNVLKFFHVASGTCSFSFTVRSYCTLVRLLIASNHDAPARLLLIRLIDGKLP-ALFDSL 163
Query: 240 VKVHKEIAVVLVDTCLGSEIFRNGIRGFDILVHVYASEFKSLGFDVAMEVFRILAGRGLV 61
+ H E+AV L + G F +R FD+L+H+ ++FKS+GFD A++VFR LA RG+
Sbjct: 164 QQKHVEVAVSLAELS-GVSDFGVAVRTFDLLLHLCCTQFKSVGFDAALDVFRSLASRGVY 222
Query: 60 PSFKTCNFLMSSLVKAGE 7
PS KTCNFL+SSLVK E
Sbjct: 223 PSLKTCNFLLSSLVKENE 240
>ref|XP_006351033.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Solanum tuberosum]
Length = 928
Score = 183 bits (465), Expect = 6e-44
Identities = 115/264 (43%), Positives = 151/264 (57%), Gaps = 9/264 (3%)
Frame = -2
Query: 771 IYMDMRRLTVHKXXXXXXXXXXXAVLFLPIKRPLTVSPH---------PLQKLQNPRPEP 619
I MD+RRL + K +F IKRPLT + PLQK Q+ +P P
Sbjct: 88 IRMDVRRLKIPKTI----------AIFSHIKRPLTCVIYTASSDQISEPLQKAQSNKPNP 137
Query: 618 LEVGPSNIEATPPAPAAFDQSFQYKKCVSSILSCPNLNSCQCKDLLTHLTPHQFDSHFWE 439
+ +K V S+LS P ++S + KDLLT LTP QFD+ F E
Sbjct: 138 ----------SSEKKQKNGLDLNLRKWVVSVLSNPPVDSLKIKDLLTLLTPQQFDAIFLE 187
Query: 438 IHKYVDPSTALKFFYFACNSCGFRFTLISYCVLFHLLVSKNLDSAARLLLIRVIDGKLPI 259
I+ + P LKFF+ A +CGF F++ SYC L LLV+ N D ARLLLIR+IDGKLP
Sbjct: 188 IYSSLKPLNVLKFFHVASGTCGFSFSVRSYCTLLRLLVASNHDVPARLLLIRLIDGKLP- 246
Query: 258 TLRDDVVKVHKEIAVVLVDTCLGSEIFRNGIRGFDILVHVYASEFKSLGFDVAMEVFRIL 79
L D + H E+AV L + G F +R FD+L+H+ ++FK++GFD A++VFR L
Sbjct: 247 ALFDTSQQKHVEVAVSLAELS-GVSDFGVAVRTFDLLLHLCCTQFKNVGFDAALDVFRSL 305
Query: 78 AGRGLVPSFKTCNFLMSSLVKAGE 7
A RG+ PS KTCNFL+SSLVK E
Sbjct: 306 ASRGVYPSLKTCNFLLSSLVKENE 329
>gb|EMJ18352.1| hypothetical protein PRUPE_ppa001463mg [Prunus persica]
Length = 821
Score = 176 bits (446), Expect = 9e-42
Identities = 110/254 (43%), Positives = 151/254 (59%), Gaps = 1/254 (0%)
Frame = -2
Query: 765 MDMRRLTVHKXXXXXXXXXXXAVLFLPIKRPLTVSPHPLQKLQNP-RPEPLEVGPSNIEA 589
MD+RRL++ K L I RPLT LQ+ + P +P PL+V
Sbjct: 1 MDLRRLSISKP-----------TLLFRINRPLTCVTCNLQRPKEPPQPPPLQV------- 42
Query: 588 TPPAPAAFDQSFQYKKCVSSILSCPNLNSCQCKDLLTHLTPHQFDSHFWEIHKYVDPSTA 409
P P +QS VSSILS P+L+S +CK L+ L+ H+FD F I V+P TA
Sbjct: 43 -PKEPQPPNQSLH--NWVSSILSKPSLDSSKCKALIPLLSSHEFDRVFCSISSNVNPKTA 99
Query: 408 LKFFYFACNSCGFRFTLISYCVLFHLLVSKNLDSAARLLLIRVIDGKLPITLRDDVVKVH 229
L FFYFA S F+FT+ S+CVL LL+ NL S ARLLLIR+IDG +P+ + + H
Sbjct: 100 LHFFYFASESFKFQFTVRSFCVLVRLLILSNLVSPARLLLIRLIDGNVPVLYANHNQR-H 158
Query: 228 KEIAVVLVDTCLGSEIFRNGIRGFDILVHVYASEFKSLGFDVAMEVFRILAGRGLVPSFK 49
EIA+ ++D S G++ D+L+HVY ++FK++GF A++ F I + +G+ PS K
Sbjct: 159 MEIAIAMLDLNTVS-TQGLGVQALDLLIHVYCTQFKNMGFGYAIDAFVIFSKKGVFPSLK 217
Query: 48 TCNFLMSSLVKAGE 7
TCNFL+SSLVKA E
Sbjct: 218 TCNFLLSSLVKANE 231
>ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 161 bits (408), Expect = 2e-37
Identities = 93/180 (51%), Positives = 118/180 (65%), Gaps = 1/180 (0%)
Frame = -2
Query: 537 VSSILSCPNLNSCQCKDLLTHLTPHQFDSHFWEIHKYVDPSTALKFFYFACNSCGFRFTL 358
VSS+LS +L+S +C LL HL+P QFD F+ I +P T L FFYFA NS FRFT+
Sbjct: 50 VSSVLSHSSLDSSKCSALLPHLSPSQFDQLFFSIGLKANPMTCLNFFYFASNSFKFRFTI 109
Query: 357 ISYCVLFHLLVSKNLDSAARLLLIRVIDGKLPITLRDDVVKVHKEIAVVLVDTCLGSEIF 178
SYC L LL+ ARLLLIR+IDG LP+ L D K H EIA L L S +
Sbjct: 110 HSYCTLILLLIRSKFIPPARLLLIRLIDGNLPV-LNLDSEKFHIEIANALFG--LTSVVG 166
Query: 177 R-NGIRGFDILVHVYASEFKSLGFDVAMEVFRILAGRGLVPSFKTCNFLMSSLVKAGEPE 1
R + FD+L+HVY+++F++LGF A++VF +LA +G PS KTCNFL+SSLVKA E E
Sbjct: 167 RFEWTQAFDLLIHVYSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFE 226
>gb|EOY25407.1| Tetratricopeptide repeat-like superfamily protein, putative isoform
1 [Theobroma cacao] gi|508778152|gb|EOY25408.1|
Tetratricopeptide repeat-like superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|508778153|gb|EOY25409.1| Tetratricopeptide
repeat-like superfamily protein, putative isoform 1
[Theobroma cacao] gi|508778154|gb|EOY25410.1|
Tetratricopeptide repeat-like superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|508778155|gb|EOY25411.1| Tetratricopeptide
repeat-like superfamily protein, putative isoform 1
[Theobroma cacao] gi|508778156|gb|EOY25412.1|
Tetratricopeptide repeat-like superfamily protein,
putative isoform 1 [Theobroma cacao]
Length = 845
Score = 158 bits (400), Expect = 2e-36
Identities = 104/260 (40%), Positives = 146/260 (56%), Gaps = 7/260 (2%)
Frame = -2
Query: 765 MDMRRLTVHKXXXXXXXXXXXAVLFLPIKRPLT-----VSPHPLQKLQNPRPEPLEVGPS 601
MD+RRL V+K ++ PI RPLT S + NP+ +P P
Sbjct: 1 MDLRRLAVNKPIY----------IYTPITRPLTCVTSTTSAAAAAQQFNPQQQPQP--PL 48
Query: 600 NIEATPPAPAAFDQSFQ-YKKCVSSILSCPNLNSCQCKDLLTHLTPHQFDSHFWEIHKYV 424
N+ + + + + + Q +S ILS +L+S +CK LL L+P FD F I ++
Sbjct: 49 NLTDSDSSNDSNNNNNQGLLGRLSCILSKSSLDSSKCKQLLPLLSPLDFDRFFSAISSHL 108
Query: 423 DPSTALKFFYFACNSCGFRFTLISYCVLFHLLVSKNLDSAARLLLIRVIDGKLPITLRDD 244
+P T L FFY A S FRFTL SYC+L LL+ N S ARLL IR+IDGKLP++ ++
Sbjct: 109 NPKTTLHFFYLASQSFNFRFTLRSYCILILLLLLANHSSPARLLFIRLIDGKLPLSSPNN 168
Query: 243 VVKVHKEIAVVLVD-TCLGSEIFRNGIRGFDILVHVYASEFKSLGFDVAMEVFRILAGRG 67
H +I L D L + R + G D+L+H+Y ++FK+ GF A++VF LA +G
Sbjct: 169 TTIDHIQITTALADLNTLSKGVPR--VMGVDMLLHLYCTQFKNAGFTSAIDVFFTLADKG 226
Query: 66 LVPSFKTCNFLMSSLVKAGE 7
+ PS KTCNF +SSLVKA E
Sbjct: 227 MFPSSKTCNFFLSSLVKANE 246
>gb|AHB18408.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
Length = 846
Score = 157 bits (396), Expect = 6e-36
Identities = 99/233 (42%), Positives = 138/233 (59%), Gaps = 3/233 (1%)
Frame = -2
Query: 696 LFLPIKRPLT--VSPHPLQKLQNPRPEPLEVGPSNIEATPPAPAAFDQSFQYKKCVSSIL 523
++ PI RPLT S P+ P P ++ P + P +P +QS +SSIL
Sbjct: 38 IYTPITRPLTCATSSSPI-----PSPAAPQIDP---QRQPSSPPPVNQSLL--DTLSSIL 87
Query: 522 SCPNLNSCQCKDLLTHLTPHQFDSHFWEIHKYVDPSTALKFFYFACNSCGFRFTLISYCV 343
S P+L+S + K LL L+P FD F + DP T L FF+ A FRFTL SY +
Sbjct: 88 SKPSLDSSKSKQLLPLLSPSDFDRFFIALSPRADPKTTLNFFHLASRCFNFRFTLRSYYI 147
Query: 342 LFHLLVSKNLDSAARLLLIRVIDGKLPITLRDDVVKV-HKEIAVVLVDTCLGSEIFRNGI 166
L LL+ N SAARLLLIR+IDGKLP+ ++ V H +IA+ L D L + G+
Sbjct: 148 LILLLLLSNNSSAARLLLIRLIDGKLPLFSPNNPPTVNHIQIAIALAD--LNTSF--KGV 203
Query: 165 RGFDILVHVYASEFKSLGFDVAMEVFRILAGRGLVPSFKTCNFLMSSLVKAGE 7
G D+L+H+Y ++FK++GF A++VF LA +G+ PS KTCNF ++SL+KA E
Sbjct: 204 AGVDLLLHLYCTQFKNVGFTYAIDVFFTLAYKGIFPSTKTCNFFLNSLLKANE 256
>ref|XP_003548529.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Glycine max]
Length = 840
Score = 145 bits (366), Expect = 2e-32
Identities = 85/217 (39%), Positives = 120/217 (55%), Gaps = 3/217 (1%)
Frame = -2
Query: 648 QKLQNPRPEPLEVGPSNIEATPPAPAAFDQSFQYKKCVSSILSCPNLNSCQCKDLLTHLT 469
++L P P PL P + PP P+ + SIL+ L+S +CK +L HLT
Sbjct: 36 RQLSPPPPPPLP--PPSPPPPPPHPSL--------SSIPSILTSKTLDSSKCKSILPHLT 85
Query: 468 PHQFDSHFWEIHKYVDPSTALKFFYFACNSCGFRFTLISYCVLFHLLVSKNLDSAARLLL 289
PH FD F +H+ V+P T +FF FA C FRFT+ SYC+L L++ + AR LL
Sbjct: 86 PHHFDRLFLSLHRTVNPKTTHEFFRFATRHCNFRFTVRSYCLLLRSLLADSFVPRARFLL 145
Query: 288 IRVIDGKLPITLRDDVVKVH---KEIAVVLVDTCLGSEIFRNGIRGFDILVHVYASEFKS 118
R+IDG +P H +EIA +++ GS+ R G D+L+H+ S+FK
Sbjct: 146 ARLIDGHVPTWSSKTTTSFHDRLREIASSMLELNQGSDEQRLG--ELDLLLHILCSQFKC 203
Query: 117 LGFDVAMEVFRILAGRGLVPSFKTCNFLMSSLVKAGE 7
LG A ++F + + RG+ P KTCN L+SSLVKA E
Sbjct: 204 LGSRCAFDIFVMFSKRGVFPCLKTCNLLLSSLVKANE 240
>ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata] gi|297313772|gb|EFH44195.1| hypothetical protein
ARALYDRAFT_492917 [Arabidopsis lyrata subsp. lyrata]
Length = 817
Score = 133 bits (335), Expect = 7e-29
Identities = 79/183 (43%), Positives = 114/183 (62%), Gaps = 6/183 (3%)
Frame = -2
Query: 537 VSSILSCPNLNSCQCKDLLTHLTPHQFDSHFWEIHKYVDPSTALKFFYFACNSCGFRFTL 358
+SS+LS +L+ QCK L+T L+PH+FD F E V+P TAL FF A +S F F+L
Sbjct: 56 LSSVLSKRSLDYEQCKQLITVLSPHEFDRLFPEFRFKVNPKTALDFFRLASDSFSFSFSL 115
Query: 357 ISYCVLFHLLVSKNLDSAARLLLIRVIDGKLPIT------LRDDVVKVHKEIAVVLVDTC 196
SYC+L LL+ NL S AR++LIR+I+G +P+ LRD V + A+ + C
Sbjct: 116 RSYCLLIGLLLDANLSSPARVVLIRLINGNVPVLPCGNGGLRDSRVAIAD--AMASLSLC 173
Query: 195 LGSEIFRNGIRGFDILVHVYASEFKSLGFDVAMEVFRILAGRGLVPSFKTCNFLMSSLVK 16
EI R + D+L+ VY ++FK G +A++VF +LA +G+ PS TCN L++SLV+
Sbjct: 174 FDEEIRR---KMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVR 230
Query: 15 AGE 7
A E
Sbjct: 231 ATE 233
>sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19440, chloroplastic; Flags: Precursor
Length = 838
Score = 132 bits (333), Expect = 1e-28
Identities = 79/180 (43%), Positives = 114/180 (63%), Gaps = 3/180 (1%)
Frame = -2
Query: 537 VSSILSCPNLNSCQCKDLLTHLTPHQFDSHFWEIHKYVDPSTALKFFYFACNSCGFRFTL 358
+SS+LS +L+ QCK L+T L+P +FD F E V+P TAL FF A +S F F+L
Sbjct: 80 LSSVLSKRSLDYEQCKQLITVLSPLEFDRLFPEFRSKVNPKTALDFFRLASDSFSFSFSL 139
Query: 357 ISYCVLFHLLVSKNLDSAARLLLIRVIDGKLPIT---LRDDVVKVHKEIAVVLVDTCLGS 187
SYC+L LL+ NL SAAR++LIR+I+G +P+ LRD V + A+ + C
Sbjct: 140 RSYCLLIGLLLDANLLSAARVVLIRLINGNVPVLPCGLRDSRVAIAD--AMASLSLCFDE 197
Query: 186 EIFRNGIRGFDILVHVYASEFKSLGFDVAMEVFRILAGRGLVPSFKTCNFLMSSLVKAGE 7
EI R + D+L+ VY ++FK G +A++VF +LA +G+ PS TCN L++SLV+A E
Sbjct: 198 EIRR---KMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANE 254
>emb|CAA18631.1| putative protein [Arabidopsis thaliana] gi|7268739|emb|CAB78946.1|
putative protein [Arabidopsis thaliana]
Length = 814
Score = 132 bits (333), Expect = 1e-28
Identities = 79/180 (43%), Positives = 114/180 (63%), Gaps = 3/180 (1%)
Frame = -2
Query: 537 VSSILSCPNLNSCQCKDLLTHLTPHQFDSHFWEIHKYVDPSTALKFFYFACNSCGFRFTL 358
+SS+LS +L+ QCK L+T L+P +FD F E V+P TAL FF A +S F F+L
Sbjct: 56 LSSVLSKRSLDYEQCKQLITVLSPLEFDRLFPEFRSKVNPKTALDFFRLASDSFSFSFSL 115
Query: 357 ISYCVLFHLLVSKNLDSAARLLLIRVIDGKLPIT---LRDDVVKVHKEIAVVLVDTCLGS 187
SYC+L LL+ NL SAAR++LIR+I+G +P+ LRD V + A+ + C
Sbjct: 116 RSYCLLIGLLLDANLLSAARVVLIRLINGNVPVLPCGLRDSRVAIAD--AMASLSLCFDE 173
Query: 186 EIFRNGIRGFDILVHVYASEFKSLGFDVAMEVFRILAGRGLVPSFKTCNFLMSSLVKAGE 7
EI R + D+L+ VY ++FK G +A++VF +LA +G+ PS TCN L++SLV+A E
Sbjct: 174 EIRR---KMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANE 230
>ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186696|ref|NP_001190771.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis
thaliana] gi|332658782|gb|AEE84182.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|332658783|gb|AEE84183.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 132 bits (333), Expect = 1e-28
Identities = 79/180 (43%), Positives = 114/180 (63%), Gaps = 3/180 (1%)
Frame = -2
Query: 537 VSSILSCPNLNSCQCKDLLTHLTPHQFDSHFWEIHKYVDPSTALKFFYFACNSCGFRFTL 358
+SS+LS +L+ QCK L+T L+P +FD F E V+P TAL FF A +S F F+L
Sbjct: 67 LSSVLSKRSLDYEQCKQLITVLSPLEFDRLFPEFRSKVNPKTALDFFRLASDSFSFSFSL 126
Query: 357 ISYCVLFHLLVSKNLDSAARLLLIRVIDGKLPIT---LRDDVVKVHKEIAVVLVDTCLGS 187
SYC+L LL+ NL SAAR++LIR+I+G +P+ LRD V + A+ + C
Sbjct: 127 RSYCLLIGLLLDANLLSAARVVLIRLINGNVPVLPCGLRDSRVAIAD--AMASLSLCFDE 184
Query: 186 EIFRNGIRGFDILVHVYASEFKSLGFDVAMEVFRILAGRGLVPSFKTCNFLMSSLVKAGE 7
EI R + D+L+ VY ++FK G +A++VF +LA +G+ PS TCN L++SLV+A E
Sbjct: 185 EIRR---KMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANE 241
>ref|XP_004509525.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X1 [Cicer arietinum]
gi|502153968|ref|XP_004509526.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X2 [Cicer arietinum]
gi|502153970|ref|XP_004509527.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X3 [Cicer arietinum]
gi|502153972|ref|XP_004509528.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X4 [Cicer arietinum]
gi|502153974|ref|XP_004509529.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X5 [Cicer arietinum]
gi|502153976|ref|XP_004509530.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X6 [Cicer arietinum]
gi|502153978|ref|XP_004509531.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X7 [Cicer arietinum]
gi|502153980|ref|XP_004509532.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X8 [Cicer arietinum]
gi|502153982|ref|XP_004509533.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X9 [Cicer arietinum]
gi|502153984|ref|XP_004509534.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like isoform X10 [Cicer arietinum]
Length = 835
Score = 130 bits (327), Expect = 6e-28
Identities = 88/229 (38%), Positives = 120/229 (52%), Gaps = 5/229 (2%)
Frame = -2
Query: 678 RPLT--VSPHPL-QKLQNPRPEPLEVGPSNIEATPPAPAAFDQSFQYKKCVSSILSCPNL 508
RPLT S P Q+ P P P P PP + + SILS L
Sbjct: 21 RPLTWITSNTPRHQRRHFPPPPPPPPHPPPDSNKPPLTS-----------LPSILSHKIL 69
Query: 507 NSCQCKDLLTHLTPHQFDSHFWEIHKYVDPSTALKFFYFACNSCGFRFTLISYCVLFHLL 328
+S +CK +L HLTPHQFD+ F+ H V+ T L FF FA N F FT+ SYC+L LL
Sbjct: 70 DSSKCKSILPHLTPHQFDTLFFTHHSTVNLKTTLDFFRFASNQFKFCFTVRSYCLLIRLL 129
Query: 327 VSKNLDSAARLLLIRVIDGKL--PITLRDDVVKVHKEIAVVLVDTCLGSEIFRNGIRGFD 154
+ N AR + R+IDG + P+ RDD + E+A ++ S + D
Sbjct: 130 LCSNHLPRARFFMKRLIDGNVSTPLLNRDDRL---SEMASSFLEL---SRLTERSHGELD 183
Query: 153 ILVHVYASEFKSLGFDVAMEVFRILAGRGLVPSFKTCNFLMSSLVKAGE 7
+L+H+ S+F+ LGF A ++F + G+ PS KTCNFL+SSLVK+ E
Sbjct: 184 LLLHILCSQFQHLGFHWAFDIFTLFTSNGVFPSLKTCNFLLSSLVKSNE 232
>ref|XP_006413978.1| hypothetical protein EUTSA_v10024401mg [Eutrema salsugineum]
gi|557115148|gb|ESQ55431.1| hypothetical protein
EUTSA_v10024401mg [Eutrema salsugineum]
Length = 837
Score = 125 bits (315), Expect = 1e-26
Identities = 75/182 (41%), Positives = 111/182 (60%), Gaps = 5/182 (2%)
Frame = -2
Query: 537 VSSILSCPNLNSCQCKDLLTHLTPHQFDSHFWEIHKYVDPSTALKFFYFACNSCGFRFTL 358
+S+ LS +L+ QCK L+ L+PH+FD F + V+P TAL FF A +S F F+L
Sbjct: 77 LSAALSRRSLDYEQCKQLIATLSPHEFDRLFPDFRSKVNPKTALDFFRLASDSFSFSFSL 136
Query: 357 ISYCVLFHLLVSKNLDSAARLLLIRVIDGKLPI-----TLRDDVVKVHKEIAVVLVDTCL 193
SYC+L LL+ +L S ARL+LIR+I+G +P+ RD V + A+ + C
Sbjct: 137 RSYCLLIGLLLDASLLSPARLVLIRLINGNVPVLPSANDSRDGRVAIAD--AMASLSLCF 194
Query: 192 GSEIFRNGIRGFDILVHVYASEFKSLGFDVAMEVFRILAGRGLVPSFKTCNFLMSSLVKA 13
EI +R D+L+ VY ++FK G +A+++F +LA +GL PS TCN L++SLV+A
Sbjct: 195 DPEI---RMRISDLLIEVYCTQFKRAGCYLALDIFPLLANKGLFPSRTTCNILLTSLVRA 251
Query: 12 GE 7
E
Sbjct: 252 NE 253
>ref|XP_006282558.1| hypothetical protein CARUB_v10004123mg [Capsella rubella]
gi|482551263|gb|EOA15456.1| hypothetical protein
CARUB_v10004123mg [Capsella rubella]
Length = 838
Score = 125 bits (314), Expect = 2e-26
Identities = 77/183 (42%), Positives = 110/183 (60%), Gaps = 6/183 (3%)
Frame = -2
Query: 537 VSSILSCPNLNSCQCKDLLTHLTPHQFDSHFWEIHKYVDPSTALKFFYFACNSCGFRFTL 358
+SS+LS +L+ CK L+T L+P +FD F E V+P TAL FF A +S F F+L
Sbjct: 77 LSSVLSKRSLDYELCKQLITVLSPLEFDRLFPEFRSKVNPKTALNFFRLASDSFSFSFSL 136
Query: 357 ISYCVLFHLLVSKNLDSAARLLLIRVIDGKLPIT------LRDDVVKVHKEIAVVLVDTC 196
SYC+L LL+ NL S AR+ LIR+I+G +P+ LRD V + A+ + C
Sbjct: 137 RSYCLLIGLLLDANLLSPARVTLIRLINGNVPVLPCGDGGLRDSRVAIAD--AMARLSLC 194
Query: 195 LGSEIFRNGIRGFDILVHVYASEFKSLGFDVAMEVFRILAGRGLVPSFKTCNFLMSSLVK 16
EI R + D+L+ VY ++FK G +A++VF LA +G+ PS TCN L++SLV+
Sbjct: 195 FDEEIRR---KMSDLLIEVYCTQFKRDGCYLALDVFPFLANKGMFPSKTTCNILLTSLVR 251
Query: 15 AGE 7
A E
Sbjct: 252 ANE 254
>gb|ESW28323.1| hypothetical protein PHAVU_003G277400g [Phaseolus vulgaris]
Length = 837
Score = 125 bits (313), Expect = 2e-26
Identities = 79/225 (35%), Positives = 121/225 (53%), Gaps = 1/225 (0%)
Frame = -2
Query: 678 RPLT-VSPHPLQKLQNPRPEPLEVGPSNIEATPPAPAAFDQSFQYKKCVSSILSCPNLNS 502
RPLT V+ L+ + P P P TPP + + S+L+ L+S
Sbjct: 21 RPLTWVTSTALRHQRRHLPPPTPPPPPPPHPTPPQTT----NHALLTLLPSLLTTGVLDS 76
Query: 501 CQCKDLLTHLTPHQFDSHFWEIHKYVDPSTALKFFYFACNSCGFRFTLISYCVLFHLLVS 322
+CK +L HL+P +FD F+ IH V+P T L FF A N F FT SYC+L L++
Sbjct: 77 SKCKSILPHLSPLEFDRLFFPIHHTVNPITTLDFFRLATNRFKFPFTFRSYCLLLRSLLA 136
Query: 321 KNLDSAARLLLIRVIDGKLPITLRDDVVKVHKEIAVVLVDTCLGSEIFRNGIRGFDILVH 142
+L AR L+ R+IDG +P + D ++ +EIA +++ +++ D+L++
Sbjct: 137 SSLLPRARSLVTRLIDGHVPTSFHDRENRL-REIASSMLEL---NQVLDTRHGELDLLLY 192
Query: 141 VYASEFKSLGFDVAMEVFRILAGRGLVPSFKTCNFLMSSLVKAGE 7
+ S +K GF A ++F + + RG+ P KTCNFL+SSLV A E
Sbjct: 193 ILCSRYKDFGFRCAFDIFIMFSKRGVFPCLKTCNFLLSSLVTANE 237
>ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523015|gb|AET03469.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 819
Score = 119 bits (299), Expect = 1e-24
Identities = 74/209 (35%), Positives = 111/209 (53%)
Frame = -2
Query: 633 PRPEPLEVGPSNIEATPPAPAAFDQSFQYKKCVSSILSCPNLNSCQCKDLLTHLTPHQFD 454
P P+P P PP+P + SIL+ L+S +CK L+ +LTPH+F+
Sbjct: 33 PPPQPPPPPPQ-----PPSPPP--------TTLPSILAHKVLDSSKCKTLIPNLTPHEFE 79
Query: 453 SHFWEIHKYVDPSTALKFFYFACNSCGFRFTLISYCVLFHLLVSKNLDSAARLLLIRVID 274
F+ H V+ T L FF FA + FRFT+ SYC+L LL++ N A+ L R+I+
Sbjct: 80 HSFFTHHTTVNLKTTLDFFSFASKNFKFRFTVRSYCILIRLLLASNHIPRAKFTLKRLIE 139
Query: 273 GKLPITLRDDVVKVHKEIAVVLVDTCLGSEIFRNGIRGFDILVHVYASEFKSLGFDVAME 94
G L+ ++ EIA + E+ D+L+++ S+F+ LGF A +
Sbjct: 140 GNANTPLKKTDARL-SEIASAFL------ELGERSHGELDLLIYILCSQFQHLGFHWAFD 192
Query: 93 VFRILAGRGLVPSFKTCNFLMSSLVKAGE 7
F + +G+ PS K+CNFLMSSLVK+ E
Sbjct: 193 TFMLFTSKGVFPSLKSCNFLMSSLVKSNE 221