BLASTX nr result

ID: Rehmannia23_contig00027191 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00027191
         (433 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314375.1| predicted protein [Populus trichocarpa]            67   3e-09

>ref|XP_002314375.1| predicted protein [Populus trichocarpa]
          Length = 1335

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 48/141 (34%), Positives = 64/141 (45%), Gaps = 6/141 (4%)
 Frame = +3

Query: 24   GKKVRRTSVFDRLGPIQKLKSKGTIHQRLGISTSSKYWKRSRHPRATEKLRSLVPSRMKR 203
            GK ++RTSVF RLG       K T+  +  + + SK             LRS +PS MKR
Sbjct: 1114 GKALKRTSVFARLGQSMSKDDKHTLDHQSSLMSDSKV------------LRSKIPSHMKR 1161

Query: 204  QTTLLISCERVLKAKFQTVVFTQPQDNEDDKESVAST-YHITLSXXXXXXXXXXXXXXXX 380
            Q   ++S E  LK K +T+V T P + E + E +  T  HIT+                 
Sbjct: 1162 QCEWVVSAEETLKGKTRTIVITNPSNEEKEDEIMCLTSNHITIEEDDNDKFVVEEDVEEA 1221

Query: 381  XGI-----KATVDELKEINLG 428
                    K T+DELKE NLG
Sbjct: 1222 SPSLEAENKPTMDELKEANLG 1242


Top