BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00027075
         (439 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004497405.1| PREDICTED: non-structural maintenance of chr...    88   1e-15
ref|XP_006307701.1| hypothetical protein CARUB_v10009330mg [Caps...    88   1e-15
ref|XP_002529957.1| Non-structural maintenance of chromosome ele...    88   1e-15
ref|XP_006346663.1| PREDICTED: non-structural maintenance of chr...    87   2e-15
ref|NP_175525.1| Nse4, component of Smc5/6 DNA repair complex [A...    86   4e-15
dbj|BAB02484.1| unnamed protein product [Arabidopsis thaliana]         85   1e-14
ref|XP_003592856.1| Non-structural maintenance of chromosomes el...    85   1e-14
ref|NP_188712.4| Nse4, component of Smc5/6 DNA repair complex [A...    85   1e-14
emb|CBI30028.3| unnamed protein product [Vitis vinifera]               84   1e-14
ref|XP_002279026.1| PREDICTED: non-structural maintenance of chr...    84   2e-14
ref|XP_002894295.1| hypothetical protein ARALYDRAFT_474228 [Arab...    84   3e-14
gb|EOY32462.1| Non-structural maintenance of chromosome element ...    82   6e-14
gb|EOY32461.1| Nse4, component of Smc5/6 DNA repair complex, put...    82   6e-14
ref|XP_002885402.1| hypothetical protein ARALYDRAFT_342232 [Arab...    82   6e-14
gb|EOY09479.1| Non-structural maintenance of chromosome element ...    82   7e-14
ref|XP_002304893.1| hypothetical protein POPTR_0003s21830g [Popu...    82   1e-13
ref|XP_006838288.1| hypothetical protein AMTR_s00103p00104910 [A...    81   1e-13
ref|XP_002437292.1| hypothetical protein SORBIDRAFT_10g024320 [S...    81   1e-13
ref|XP_006362231.1| PREDICTED: non-structural maintenance of chr...    81   2e-13
gb|EMJ06504.1| hypothetical protein PRUPE_ppa006782mg [Prunus pe...    80   2e-13

>ref|XP_004497405.1| PREDICTED: non-structural maintenance of chromosome element 4-like
           [Cicer arietinum]
          Length = 381

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 45/104 (43%), Positives = 67/104 (64%)
 Frame = +2

Query: 125 QREMEGKLKRERVADNGGDSDSVVVEETDELNQENDPVSKRRDIRSHYREIENRINEGKD 304
           + ++  ++KRER+++N   SD             +   + RR IRS + ++++ INE KD
Sbjct: 16  EEQVSRRVKRERLSENNAASD-------------HQDTTSRRIIRSEFLKLKSIINEKKD 62

Query: 305 EIANEDSDKFMAIMNEVENMHQHVKKPREQIADAEALLGLTRHL 436
           ++ N DSDKF +I+NE + +H  VKKPREQ+ADAEALL LTR L
Sbjct: 63  DLINSDSDKFESILNEFDKLHDQVKKPREQVADAEALLDLTRSL 106


>ref|XP_006307701.1| hypothetical protein CARUB_v10009330mg [Capsella rubella]
           gi|482576412|gb|EOA40599.1| hypothetical protein
           CARUB_v10009330mg [Capsella rubella]
          Length = 402

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 43/87 (49%), Positives = 59/87 (67%)
 Frame = +2

Query: 176 GDSDSVVVEETDELNQENDPVSKRRDIRSHYREIENRINEGKDEIANEDSDKFMAIMNEV 355
           GD    + E      +E   +S RR +RS Y  ++N+I++ KD++ + DSDKF  I+NEV
Sbjct: 41  GDGSVRIDEPPPTQEEEEQGISDRRILRSQYLALQNKISDCKDDLMSIDSDKFTRIINEV 100

Query: 356 ENMHQHVKKPREQIADAEALLGLTRHL 436
           EN+HQHV+KPREQIADAEALL +   L
Sbjct: 101 ENLHQHVRKPREQIADAEALLDIANTL 127


>ref|XP_002529957.1| Non-structural maintenance of chromosome element, putative [Ricinus
           communis] gi|223530555|gb|EEF32434.1| Non-structural
           maintenance of chromosome element, putative [Ricinus
           communis]
          Length = 391

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 48/105 (45%), Positives = 69/105 (65%)
 Frame = +2

Query: 122 TQREMEGKLKRERVADNGGDSDSVVVEETDELNQENDPVSKRRDIRSHYREIENRINEGK 301
           T RE+   +KRER++ N        VE + +   ++D V  RR +RS Y  + N+IN  +
Sbjct: 16  TARELRA-VKRERLSRNR-------VESSTQQPHQDDSVVDRRVLRSKYLALYNKINVER 67

Query: 302 DEIANEDSDKFMAIMNEVENMHQHVKKPREQIADAEALLGLTRHL 436
           D++A  DSDKF  I+ EVE++HQHV++PREQ+ADAEALLG+   L
Sbjct: 68  DDLAQVDSDKFATIIKEVEDLHQHVQRPREQVADAEALLGIASTL 112


>ref|XP_006346663.1| PREDICTED: non-structural maintenance of chromosomes element 4
           homolog A-like [Solanum tuberosum]
          Length = 377

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 44/77 (57%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
 Frame = +2

Query: 209 DELNQEND-PVSKRRDIRSHYREIENRINEGKDEIANEDSDKFMAIMNEVENMHQHVKKP 385
           +ELN   + P+S+ R +R  Y  I+N I+EGKD+I + DS+KF  IMNE+EN H  VKKP
Sbjct: 7   EELNGFTEQPISQARVVRCKYSTIQNSISEGKDDIGSVDSEKFKEIMNEIENSHNEVKKP 66

Query: 386 REQIADAEALLGLTRHL 436
           REQ+ADAEAL  LTR L
Sbjct: 67  REQVADAEALFDLTRTL 83


>ref|NP_175525.1| Nse4, component of Smc5/6 DNA repair complex [Arabidopsis thaliana]
           gi|75169065|sp|Q9C689.1|NSE4A_ARATH RecName:
           Full=Non-structural maintenance of chromosomes element 4
           homolog A; Short=Non-SMC element 4 homolog A
           gi|12320790|gb|AAG50545.1|AC079828_16 hypothetical
           protein [Arabidopsis thaliana]
           gi|28393397|gb|AAO42122.1| unknown protein [Arabidopsis
           thaliana] gi|29824223|gb|AAP04072.1| unknown protein
           [Arabidopsis thaliana] gi|332194504|gb|AEE32625.1| Nse4,
           component of Smc5/6 DNA repair complex [Arabidopsis
           thaliana]
          Length = 403

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 43/86 (50%), Positives = 58/86 (67%)
 Frame = +2

Query: 179 DSDSVVVEETDELNQENDPVSKRRDIRSHYREIENRINEGKDEIANEDSDKFMAIMNEVE 358
           ++DSV  +E     +E   +S RR +RS Y  ++N IN+ KD++   DSDKF  I+N VE
Sbjct: 37  EADSVRPDEPPPPQEEEQGISDRRILRSKYLSLQNEINDCKDDLMKIDSDKFSRIINAVE 96

Query: 359 NMHQHVKKPREQIADAEALLGLTRHL 436
           N+HQ V+KPREQIADAEALL +   L
Sbjct: 97  NLHQQVRKPREQIADAEALLDIANTL 122


>dbj|BAB02484.1| unnamed protein product [Arabidopsis thaliana]
          Length = 400

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 46/115 (40%), Positives = 66/115 (57%), Gaps = 14/115 (12%)
 Frame = +2

Query: 125 QREMEGKLKRERVADNGGDSDSVVVEETDELN--------------QENDPVSKRRDIRS 262
           + E+ G   R R AD   ++  +V +E                   +E   ++ RR IRS
Sbjct: 25  ETELTGDRSRRREADESSETPKIVKKEKRSKTVIASLRPQQPPIQEEEEQGIADRRAIRS 84

Query: 263 HYREIENRINEGKDEIANEDSDKFMAIMNEVENMHQHVKKPREQIADAEALLGLT 427
            Y  + ++I + KD++   DS+KF +I+NEVEN+HQ V+KPREQIADAEALL LT
Sbjct: 85  QYLALTHKIKDAKDDLTKIDSNKFNSIINEVENLHQKVRKPREQIADAEALLDLT 139


>ref|XP_003592856.1| Non-structural maintenance of chromosomes element-like protein
           [Medicago truncatula] gi|355481904|gb|AES63107.1|
           Non-structural maintenance of chromosomes element-like
           protein [Medicago truncatula]
          Length = 384

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 47/106 (44%), Positives = 72/106 (67%), Gaps = 2/106 (1%)
 Frame = +2

Query: 125 QREMEGKLKRERVADNGGDSDSVVVEETDELNQE--NDPVSKRRDIRSHYREIENRINEG 298
           ++++  ++KRER+      + +   EE DE  +E  N   S RR IRS + ++++ INE 
Sbjct: 8   EQQVFRRVKRERL------NAAAATEEKDEEEEEEENQDSSIRRIIRSEFFKLKSLINEE 61

Query: 299 KDEIANEDSDKFMAIMNEVENMHQHVKKPREQIADAEALLGLTRHL 436
           KD++ N DS+KF +I++E + +H+ VKKPREQ+ADAEALL LTR L
Sbjct: 62  KDDLMNGDSEKFDSILHEFDKLHEQVKKPREQVADAEALLDLTRTL 107


>ref|NP_188712.4| Nse4, component of Smc5/6 DNA repair complex [Arabidopsis thaliana]
           gi|558445932|sp|F4JET1.1|NSE4B_ARATH RecName:
           Full=Non-structural maintenance of chromosomes element 4
           homolog B; Short=Non-SMC element 4 homolog B
           gi|332642899|gb|AEE76420.1| Nse4, component of Smc5/6
           DNA repair complex [Arabidopsis thaliana]
          Length = 383

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 46/115 (40%), Positives = 66/115 (57%), Gaps = 14/115 (12%)
 Frame = +2

Query: 125 QREMEGKLKRERVADNGGDSDSVVVEETDELN--------------QENDPVSKRRDIRS 262
           + E+ G   R R AD   ++  +V +E                   +E   ++ RR IRS
Sbjct: 8   ETELTGDRSRRREADESSETPKIVKKEKRSKTVIASLRPQQPPIQEEEEQGIADRRAIRS 67

Query: 263 HYREIENRINEGKDEIANEDSDKFMAIMNEVENMHQHVKKPREQIADAEALLGLT 427
            Y  + ++I + KD++   DS+KF +I+NEVEN+HQ V+KPREQIADAEALL LT
Sbjct: 68  QYLALTHKIKDAKDDLTKIDSNKFNSIINEVENLHQKVRKPREQIADAEALLDLT 122


>emb|CBI30028.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 46/104 (44%), Positives = 65/104 (62%)
 Frame = +2

Query: 125 QREMEGKLKRERVADNGGDSDSVVVEETDELNQENDPVSKRRDIRSHYREIENRINEGKD 304
           Q  M   +KRE      G S      E    N  +  V++RR +RS Y  ++N+I +G++
Sbjct: 70  QNAMVRAVKREV-----GSSSRANANEAGADNSGHQGVTERRVLRSRYLAVKNQICDGRE 124

Query: 305 EIANEDSDKFMAIMNEVENMHQHVKKPREQIADAEALLGLTRHL 436
           +I   DSDKF +I+NEVE++HQ V+KPREQ+ADAEALL +T  L
Sbjct: 125 DITKVDSDKFKSIINEVESLHQQVQKPREQVADAEALLDITNTL 168


>ref|XP_002279026.1| PREDICTED: non-structural maintenance of chromosome element 4
           [Vitis vinifera]
          Length = 380

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 41/87 (47%), Positives = 59/87 (67%)
 Frame = +2

Query: 176 GDSDSVVVEETDELNQENDPVSKRRDIRSHYREIENRINEGKDEIANEDSDKFMAIMNEV 355
           G S      E    N  +  V++RR +RS Y  ++N+I +G+++I   DSDKF +I+NEV
Sbjct: 10  GSSSRANANEAGADNSGHQGVTERRVLRSRYLAVKNQICDGREDITKVDSDKFKSIINEV 69

Query: 356 ENMHQHVKKPREQIADAEALLGLTRHL 436
           E++HQ V+KPREQ+ADAEALL +T  L
Sbjct: 70  ESLHQQVQKPREQVADAEALLDITNTL 96


>ref|XP_002894295.1| hypothetical protein ARALYDRAFT_474228 [Arabidopsis lyrata subsp.
           lyrata] gi|297340137|gb|EFH70554.1| hypothetical protein
           ARALYDRAFT_474228 [Arabidopsis lyrata subsp. lyrata]
          Length = 406

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 39/75 (52%), Positives = 53/75 (70%)
 Frame = +2

Query: 200 EETDELNQENDPVSKRRDIRSHYREIENRINEGKDEIANEDSDKFMAIMNEVENMHQHVK 379
           +E     +E   +S RR +RS Y  ++N IN+ KD++   DSDKF  I+NEVEN+H+ V+
Sbjct: 47  DEPPPTQEEEQGISDRRILRSKYLSLQNEINDSKDDLMKIDSDKFSRIINEVENLHKQVR 106

Query: 380 KPREQIADAEALLGL 424
           KPREQIADAEALL +
Sbjct: 107 KPREQIADAEALLDI 121


>gb|EOY32462.1| Non-structural maintenance of chromosome element 4, putative
           isoform 2 [Theobroma cacao]
          Length = 424

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 46/100 (46%), Positives = 65/100 (65%)
 Frame = +2

Query: 137 EGKLKRERVADNGGDSDSVVVEETDELNQENDPVSKRRDIRSHYREIENRINEGKDEIAN 316
           E K  R RVA       + V  E+D+L+++ D  + RR +RS Y  +  +IN+ +DEI+ 
Sbjct: 16  EAKPLRTRVARPARHDSADV--ESDQLSRQED-AANRRLLRSKYLAVMTKINDARDEISK 72

Query: 317 EDSDKFMAIMNEVENMHQHVKKPREQIADAEALLGLTRHL 436
            DS+KF  I+NEV+N+HQ V KPREQ+ADAEALL +   L
Sbjct: 73  VDSNKFNIIINEVDNLHQQVSKPREQVADAEALLDIANTL 112


>gb|EOY32461.1| Nse4, component of Smc5/6 DNA repair complex, putative isoform 1
           [Theobroma cacao]
          Length = 391

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 46/100 (46%), Positives = 65/100 (65%)
 Frame = +2

Query: 137 EGKLKRERVADNGGDSDSVVVEETDELNQENDPVSKRRDIRSHYREIENRINEGKDEIAN 316
           E K  R RVA       + V  E+D+L+++ D  + RR +RS Y  +  +IN+ +DEI+ 
Sbjct: 16  EAKPLRTRVARPARHDSADV--ESDQLSRQED-AANRRLLRSKYLAVMTKINDARDEISK 72

Query: 317 EDSDKFMAIMNEVENMHQHVKKPREQIADAEALLGLTRHL 436
            DS+KF  I+NEV+N+HQ V KPREQ+ADAEALL +   L
Sbjct: 73  VDSNKFNIIINEVDNLHQQVSKPREQVADAEALLDIANTL 112


>ref|XP_002885402.1| hypothetical protein ARALYDRAFT_342232 [Arabidopsis lyrata subsp.
           lyrata] gi|297331242|gb|EFH61661.1| hypothetical protein
           ARALYDRAFT_342232 [Arabidopsis lyrata subsp. lyrata]
          Length = 395

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 44/106 (41%), Positives = 65/106 (61%), Gaps = 4/106 (3%)
 Frame = +2

Query: 119 TTQREMEGKLKRERVADNGGDSDSVVV----EETDELNQENDPVSKRRDIRSHYREIENR 286
           +++RE     +R ++      S +V+     +E     ++   ++ RR IRS Y  + ++
Sbjct: 16  SSRREAGESSERPKIVKKEKQSKTVIASLRPQEPPIQEEDEQGIADRRAIRSQYLALTHQ 75

Query: 287 INEGKDEIANEDSDKFMAIMNEVENMHQHVKKPREQIADAEALLGL 424
           I + KD++   DSDKF  I+NEVEN+HQ VKKPREQIADAEALL L
Sbjct: 76  IKDAKDDLTKIDSDKFKRIINEVENLHQKVKKPREQIADAEALLDL 121


>gb|EOY09479.1| Non-structural maintenance of chromosome element 4, putative
           [Theobroma cacao]
          Length = 346

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 40/78 (51%), Positives = 55/78 (70%)
 Frame = +2

Query: 203 ETDELNQENDPVSKRRDIRSHYREIENRINEGKDEIANEDSDKFMAIMNEVENMHQHVKK 382
           ETD  + ++   S RR +RS Y  ++N I + +D++   DS KF +I NEVE++HQHV+K
Sbjct: 12  ETDANDSDHQHFSDRRTLRSRYLAVKNLIFDERDDMCRADSAKFNSIFNEVESLHQHVQK 71

Query: 383 PREQIADAEALLGLTRHL 436
           PREQIADAEALL +T  L
Sbjct: 72  PREQIADAEALLDITNSL 89


>ref|XP_002304893.1| hypothetical protein POPTR_0003s21830g [Populus trichocarpa]
           gi|222842325|gb|EEE79872.1| hypothetical protein
           POPTR_0003s21830g [Populus trichocarpa]
          Length = 393

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 44/98 (44%), Positives = 64/98 (65%)
 Frame = +2

Query: 143 KLKRERVADNGGDSDSVVVEETDELNQENDPVSKRRDIRSHYREIENRINEGKDEIANED 322
           ++KRERV  + G S        +E NQ+ D    RR +RS YR ++NRI + +D++   D
Sbjct: 26  EMKRERVTRSRGKSG------VEEPNQQMD----RRVLRSMYRTLQNRIKDKRDDLTRHD 75

Query: 323 SDKFMAIMNEVENMHQHVKKPREQIADAEALLGLTRHL 436
            D+F  ++ EVE++H+ V+KPREQ+ADAEALLGL   L
Sbjct: 76  LDRFNTMIKEVEDLHKFVQKPREQVADAEALLGLANTL 113


>ref|XP_006838288.1| hypothetical protein AMTR_s00103p00104910 [Amborella trichopoda]
           gi|548840756|gb|ERN00857.1| hypothetical protein
           AMTR_s00103p00104910 [Amborella trichopoda]
          Length = 385

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 43/97 (44%), Positives = 62/97 (63%)
 Frame = +2

Query: 146 LKRERVADNGGDSDSVVVEETDELNQENDPVSKRRDIRSHYREIENRINEGKDEIANEDS 325
           +K+E+   +     S     TD   Q N   ++RR +RS Y  ++N IN+ +DEI   DS
Sbjct: 2   VKKEKHQASTSKEPSSKATHTD--TQGNQSTTERRVLRSRYLAVKNLINDERDEITCLDS 59

Query: 326 DKFMAIMNEVENMHQHVKKPREQIADAEALLGLTRHL 436
           DKF  I++EVE++H+HV+KPREQ+ADAEALL +   L
Sbjct: 60  DKFKTIISEVESLHRHVEKPREQVADAEALLDIANTL 96


>ref|XP_002437292.1| hypothetical protein SORBIDRAFT_10g024320 [Sorghum bicolor]
           gi|241915515|gb|EER88659.1| hypothetical protein
           SORBIDRAFT_10g024320 [Sorghum bicolor]
          Length = 417

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 38/72 (52%), Positives = 54/72 (75%)
 Frame = +2

Query: 221 QENDPVSKRRDIRSHYREIENRINEGKDEIANEDSDKFMAIMNEVENMHQHVKKPREQIA 400
           +E   V  RR +RS Y  ++  I++ KD++A+ DSDKF +I+N+VE++HQHV++PREQIA
Sbjct: 25  EETQAVDDRRMLRSQYHAVKGLISDEKDDMASVDSDKFCSIINKVESLHQHVQRPREQIA 84

Query: 401 DAEALLGLTRHL 436
           DAE LL LT  L
Sbjct: 85  DAETLLDLTASL 96


>ref|XP_006362231.1| PREDICTED: non-structural maintenance of chromosomes element 4
           homolog A-like [Solanum tuberosum]
          Length = 400

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 42/89 (47%), Positives = 59/89 (66%)
 Frame = +2

Query: 170 NGGDSDSVVVEETDELNQENDPVSKRRDIRSHYREIENRINEGKDEIANEDSDKFMAIMN 349
           N  +++S V EET         +  RR +RSHY   +NRI++ +D I+  DSD+F +I+ 
Sbjct: 39  NSNNNNSSVEEET---------IIGRRVLRSHYLNFKNRISDERDNISTVDSDRFKSIIE 89

Query: 350 EVENMHQHVKKPREQIADAEALLGLTRHL 436
           EVE +HQ V+KPREQ+ADAEALL +T  L
Sbjct: 90  EVERLHQQVQKPREQVADAEALLDITNTL 118


>gb|EMJ06504.1| hypothetical protein PRUPE_ppa006782mg [Prunus persica]
          Length = 395

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 44/97 (45%), Positives = 64/97 (65%)
 Frame = +2

Query: 146 LKRERVADNGGDSDSVVVEETDELNQENDPVSKRRDIRSHYREIENRINEGKDEIANEDS 325
           +KRERV  N G      VE   +L  E D V +RR +RS Y  ++N I+E +D++   +S
Sbjct: 26  VKRERVNANAGR-----VENESDLPSEQDSV-QRRTLRSDYLAVKNLISEKRDDLMCPES 79

Query: 326 DKFMAIMNEVENMHQHVKKPREQIADAEALLGLTRHL 436
           ++F  I+N+VE +H+ V+KPREQ+ADAEALL +T  L
Sbjct: 80  ERFCLIINKVEKLHEQVQKPREQVADAEALLDITNTL 116