BLASTX nr result
ID: Rehmannia23_contig00026518
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00026518
(553 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006467314.1| PREDICTED: heterogeneous nuclear ribonucleop... 71 2e-10
ref|XP_006449887.1| hypothetical protein CICLE_v10015098mg [Citr... 71 2e-10
gb|EMJ13214.1| hypothetical protein PRUPE_ppa004834mg [Prunus pe... 70 3e-10
ref|XP_002528240.1| Heterogeneous nuclear ribonucleoprotein 27C,... 70 3e-10
gb|ABB82570.1| putative RNA binding protein, partial [Primula vu... 70 3e-10
gb|EOX93430.1| RNA-binding family protein isoform 3 [Theobroma c... 69 7e-10
gb|EOX93428.1| HnRNP isoform 1 [Theobroma cacao] 69 7e-10
ref|XP_002320502.2| hypothetical protein POPTR_0014s15970g [Popu... 67 3e-09
gb|EMJ16519.1| hypothetical protein PRUPE_ppa005132mg [Prunus pe... 67 3e-09
gb|EOY28916.1| RNA-binding family protein isoform 4 [Theobroma c... 67 4e-09
gb|EOY28913.1| RNA-binding family protein isoform 1 [Theobroma c... 67 4e-09
ref|XP_006836782.1| hypothetical protein AMTR_s00088p00174110 [A... 66 5e-09
emb|CBI28407.3| unnamed protein product [Vitis vinifera] 66 5e-09
ref|XP_002272993.1| PREDICTED: uncharacterized protein LOC100246... 66 5e-09
ref|XP_006352343.1| PREDICTED: heterogeneous nuclear ribonucleop... 66 6e-09
gb|EOX93429.1| RNA-binding family protein isoform 2 [Theobroma c... 66 6e-09
gb|EMJ13215.1| hypothetical protein PRUPE_ppa004834mg [Prunus pe... 66 6e-09
ref|XP_004250279.1| PREDICTED: DAZ-associated protein 1-like [So... 66 6e-09
ref|XP_002529044.1| Heterogeneous nuclear ribonucleoprotein 27C,... 65 1e-08
ref|XP_002308799.1| hypothetical protein POPTR_0006s01680g [Popu... 65 1e-08
>ref|XP_006467314.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like isoform
X1 [Citrus sinensis] gi|568825901|ref|XP_006467315.1|
PREDICTED: heterogeneous nuclear ribonucleoprotein
1-like isoform X2 [Citrus sinensis]
Length = 475
Score = 70.9 bits (172), Expect = 2e-10
Identities = 35/64 (54%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Frame = -1
Query: 553 GNLYGGDSFYQDHAWHSSSRELEGPATFGYGRGRATADVTSDNSVGYVGDYSVT--RSNR 380
G++Y SFY D W SS ELEG +FG+G G +DV + NS GYVG YSVT ++NR
Sbjct: 412 GDIYESGSFYGDSTWRPSSSELEGSGSFGFGVGPTASDVMTKNSAGYVGGYSVTDRQANR 471
Query: 379 GIAA 368
GIAA
Sbjct: 472 GIAA 475
>ref|XP_006449887.1| hypothetical protein CICLE_v10015098mg [Citrus clementina]
gi|567915149|ref|XP_006449888.1| hypothetical protein
CICLE_v10015098mg [Citrus clementina]
gi|557552498|gb|ESR63127.1| hypothetical protein
CICLE_v10015098mg [Citrus clementina]
gi|557552499|gb|ESR63128.1| hypothetical protein
CICLE_v10015098mg [Citrus clementina]
Length = 475
Score = 70.9 bits (172), Expect = 2e-10
Identities = 35/64 (54%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Frame = -1
Query: 553 GNLYGGDSFYQDHAWHSSSRELEGPATFGYGRGRATADVTSDNSVGYVGDYSVT--RSNR 380
G++Y SFY D W SS ELEG +FG+G G +DV + NS GYVG YSVT ++NR
Sbjct: 412 GDIYESGSFYGDSTWRPSSSELEGSGSFGFGVGPTASDVMTKNSAGYVGGYSVTDRQANR 471
Query: 379 GIAA 368
GIAA
Sbjct: 472 GIAA 475
>gb|EMJ13214.1| hypothetical protein PRUPE_ppa004834mg [Prunus persica]
Length = 476
Score = 70.5 bits (171), Expect = 3e-10
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Frame = -1
Query: 553 GNLYGGDSFYQDHAWHSSSRELEGPATFGYGRGRATADVTSDNSVGYVGDYSVT--RSNR 380
G+LY DS Y D W S+S EL+G +TFGYG G AD+++ +S GY+G Y+VT + NR
Sbjct: 413 GDLYHSDSVYGDSTWRSTSPELDGSSTFGYGLGDLPADISAKSSGGYIGSYNVTSRQPNR 472
Query: 379 GIAA 368
GIAA
Sbjct: 473 GIAA 476
>ref|XP_002528240.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis] gi|223532357|gb|EEF34155.1| Heterogeneous
nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 456
Score = 70.1 bits (170), Expect = 3e-10
Identities = 35/64 (54%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Frame = -1
Query: 553 GNLYGGDSFYQDHAWHSSSRELEGPATFGYGRGRATADVTSDNSVGYVGDYSVT--RSNR 380
G++Y S Y D AW SS ELEG +FG+G G A +DV + NS GYVG YSV ++NR
Sbjct: 393 GDIYENISLYGDSAWRSSPLELEGSGSFGFGLGNAASDVVTKNSAGYVGGYSVASRQANR 452
Query: 379 GIAA 368
GIAA
Sbjct: 453 GIAA 456
>gb|ABB82570.1| putative RNA binding protein, partial [Primula vulgaris]
Length = 193
Score = 70.1 bits (170), Expect = 3e-10
Identities = 34/62 (54%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Frame = -1
Query: 553 GNLYGGDSFYQDHAWHSSSRELEGPATFGYGRGRATADVTSDNSVGYVGDYSVT-RSNRG 377
GN GG SFY+D W S+S ELEGP FG+G G+ DV + NS YV Y++T R+NRG
Sbjct: 131 GNFNGGGSFYRDPTWRSASPELEGPDAFGFGDGKMDPDVLATNSPAYVDAYNITNRANRG 190
Query: 376 IA 371
IA
Sbjct: 191 IA 192
>gb|EOX93430.1| RNA-binding family protein isoform 3 [Theobroma cacao]
Length = 390
Score = 68.9 bits (167), Expect = 7e-10
Identities = 34/62 (54%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Frame = -1
Query: 550 NLYGGDSFYQDHAWHSSSRELEGPATFGYGRGRATADVTSDNSVGYVGDYSVTR--SNRG 377
+LYGG S Y D W +S+ E +G +FGYG G AT+DV+ +S GYVG YSV + SNRG
Sbjct: 328 DLYGGASVYGDTTWRTSTSERDGSGSFGYGLGSATSDVSGKSSPGYVGGYSVNKRQSNRG 387
Query: 376 IA 371
IA
Sbjct: 388 IA 389
>gb|EOX93428.1| HnRNP isoform 1 [Theobroma cacao]
Length = 477
Score = 68.9 bits (167), Expect = 7e-10
Identities = 34/62 (54%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Frame = -1
Query: 550 NLYGGDSFYQDHAWHSSSRELEGPATFGYGRGRATADVTSDNSVGYVGDYSVTR--SNRG 377
+LYGG S Y D W +S+ E +G +FGYG G AT+DV+ +S GYVG YSV + SNRG
Sbjct: 415 DLYGGASVYGDTTWRTSTSERDGSGSFGYGLGSATSDVSGKSSPGYVGGYSVNKRQSNRG 474
Query: 376 IA 371
IA
Sbjct: 475 IA 476
>ref|XP_002320502.2| hypothetical protein POPTR_0014s15970g [Populus trichocarpa]
gi|550324302|gb|EEE98817.2| hypothetical protein
POPTR_0014s15970g [Populus trichocarpa]
Length = 479
Score = 67.0 bits (162), Expect = 3e-09
Identities = 34/60 (56%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Frame = -1
Query: 550 NLYGGDSFYQDHAWHSSSRELEGPATFGYGRGRATADVTSDNSVGYVGDYSVTR--SNRG 377
+LYGG S Y D AW SS+ E +G +FGYG G AT+DV S GYVG YSV + SNRG
Sbjct: 417 DLYGGSSDYGDPAWQSSNSERDGSVSFGYGLGNATSDVPVKTSPGYVGGYSVNKRQSNRG 476
>gb|EMJ16519.1| hypothetical protein PRUPE_ppa005132mg [Prunus persica]
Length = 476
Score = 67.0 bits (162), Expect = 3e-09
Identities = 34/63 (53%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Frame = -1
Query: 550 NLYGGDSFYQDHAWHSSSRELEGPATFGYGRGRATADVTSDNSVGYVGDYSVTR--SNRG 377
+ Y G+S Y D W SS+ E EG FGYG G AT+DV++ +S GYVG YSV + SN G
Sbjct: 414 DFYNGNSVYGDPTWRSSNSEREGSVPFGYGLGGATSDVSAKSSPGYVGGYSVNKRQSNTG 473
Query: 376 IAA 368
IAA
Sbjct: 474 IAA 476
>gb|EOY28916.1| RNA-binding family protein isoform 4 [Theobroma cacao]
Length = 439
Score = 66.6 bits (161), Expect = 4e-09
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Frame = -1
Query: 550 NLYGGDSFYQDHAWHSSSRELEGPATFGYGRGRATADVTSDNSVGYVGDYSVT--RSNRG 377
N+Y SFY D W SS +LE ++FG+G G A++DV ++NS Y+G YSVT ++NRG
Sbjct: 377 NIYENGSFYGDSTWRSSPSDLERSSSFGFGLGDASSDVMTNNSADYIGGYSVTNRQANRG 436
Query: 376 IAA 368
IAA
Sbjct: 437 IAA 439
>gb|EOY28913.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508781658|gb|EOY28914.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 476
Score = 66.6 bits (161), Expect = 4e-09
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Frame = -1
Query: 550 NLYGGDSFYQDHAWHSSSRELEGPATFGYGRGRATADVTSDNSVGYVGDYSVT--RSNRG 377
N+Y SFY D W SS +LE ++FG+G G A++DV ++NS Y+G YSVT ++NRG
Sbjct: 414 NIYENGSFYGDSTWRSSPSDLERSSSFGFGLGDASSDVMTNNSADYIGGYSVTNRQANRG 473
Query: 376 IAA 368
IAA
Sbjct: 474 IAA 476
>ref|XP_006836782.1| hypothetical protein AMTR_s00088p00174110 [Amborella trichopoda]
gi|548839342|gb|ERM99635.1| hypothetical protein
AMTR_s00088p00174110 [Amborella trichopoda]
Length = 472
Score = 66.2 bits (160), Expect = 5e-09
Identities = 32/64 (50%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Frame = -1
Query: 553 GNLYGGDSFYQDHAWHSSSRELEGPATFGYGRGRATADVTSDNSVGYVGDYSVT--RSNR 380
G+LYGG S Y D W S S EL+G ++F YG G +DV + S Y+G YSV+ +SNR
Sbjct: 409 GDLYGGSSVYGDPTWRSGSTELDGSSSFSYGLGTMASDVATKGSGSYMGGYSVSNRQSNR 468
Query: 379 GIAA 368
G+AA
Sbjct: 469 GVAA 472
>emb|CBI28407.3| unnamed protein product [Vitis vinifera]
Length = 401
Score = 66.2 bits (160), Expect = 5e-09
Identities = 33/61 (54%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Frame = -1
Query: 544 YGGDSFYQDHAWHSSSRELEGPATFGYGRGRATADVTSDNSVGYVGDYSVTR--SNRGIA 371
Y G S Y D W S+ E +G +FGYG G A +DV + +S GYVG YSVT+ SNRGIA
Sbjct: 341 YSGGSVYGDSTWRPSNAERDGSGSFGYGLGNAASDVPAKSSPGYVGGYSVTKRQSNRGIA 400
Query: 370 A 368
A
Sbjct: 401 A 401
>ref|XP_002272993.1| PREDICTED: uncharacterized protein LOC100246008 [Vitis vinifera]
Length = 478
Score = 66.2 bits (160), Expect = 5e-09
Identities = 33/61 (54%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Frame = -1
Query: 544 YGGDSFYQDHAWHSSSRELEGPATFGYGRGRATADVTSDNSVGYVGDYSVTR--SNRGIA 371
Y G S Y D W S+ E +G +FGYG G A +DV + +S GYVG YSVT+ SNRGIA
Sbjct: 418 YSGGSVYGDSTWRPSNAERDGSGSFGYGLGNAASDVPAKSSPGYVGGYSVTKRQSNRGIA 477
Query: 370 A 368
A
Sbjct: 478 A 478
>ref|XP_006352343.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Solanum
tuberosum]
Length = 465
Score = 65.9 bits (159), Expect = 6e-09
Identities = 38/66 (57%), Positives = 44/66 (66%), Gaps = 4/66 (6%)
Frame = -1
Query: 553 GNLYG---GDSFYQDHAWHSSSRELEGPATFGYGRGRATADVTSDNSVGYVGDYSV-TRS 386
GNLYG G SFY+D AW S+S EL+ A+FGYG G A S+GYVG YSV RS
Sbjct: 407 GNLYGNTVGASFYEDSAWRSASPELDDSASFGYGLGNA-------ESLGYVGGYSVANRS 459
Query: 385 NRGIAA 368
N+GIAA
Sbjct: 460 NKGIAA 465
>gb|EOX93429.1| RNA-binding family protein isoform 2 [Theobroma cacao]
Length = 391
Score = 65.9 bits (159), Expect = 6e-09
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Frame = -1
Query: 550 NLYGGDSFYQDHAWHSSSRELEGPATFGYGRGRATADVTSDNSVGYVGDYSVTR--SNRG 377
+LYGG S Y D W +S+ E +G +FGYG G AT+DV+ +S GYVG YSV + SNRG
Sbjct: 328 DLYGGASVYGDTTWRTSTSERDGSGSFGYGLGSATSDVSGKSSPGYVGGYSVNKRQSNRG 387
>gb|EMJ13215.1| hypothetical protein PRUPE_ppa004834mg [Prunus persica]
Length = 489
Score = 65.9 bits (159), Expect = 6e-09
Identities = 31/61 (50%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Frame = -1
Query: 553 GNLYGGDSFYQDHAWHSSSRELEGPATFGYGRGRATADVTSDNSVGYVGDYSVT--RSNR 380
G+LY DS Y D W S+S EL+G +TFGYG G AD+++ +S GY+G Y+VT + NR
Sbjct: 413 GDLYHSDSVYGDSTWRSTSPELDGSSTFGYGLGDLPADISAKSSGGYIGSYNVTSRQPNR 472
Query: 379 G 377
G
Sbjct: 473 G 473
>ref|XP_004250279.1| PREDICTED: DAZ-associated protein 1-like [Solanum lycopersicum]
Length = 465
Score = 65.9 bits (159), Expect = 6e-09
Identities = 38/66 (57%), Positives = 44/66 (66%), Gaps = 4/66 (6%)
Frame = -1
Query: 553 GNLYG---GDSFYQDHAWHSSSRELEGPATFGYGRGRATADVTSDNSVGYVGDYSV-TRS 386
GNLYG G SFY+D AW S+S EL+ A+FGYG G A S+GYVG YSV RS
Sbjct: 407 GNLYGNTVGASFYEDSAWRSTSPELDDSASFGYGLGNA-------ESLGYVGGYSVANRS 459
Query: 385 NRGIAA 368
N+GIAA
Sbjct: 460 NKGIAA 465
>ref|XP_002529044.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis] gi|223531524|gb|EEF33355.1| Heterogeneous
nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 478
Score = 65.1 bits (157), Expect = 1e-08
Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Frame = -1
Query: 553 GNLYGGDSFYQDHAWHSSSRELEGPATFGYGRGRATADVTSDNSVGYVGDYSVT--RSNR 380
G+LY S Y D W S + ELEG +FGYG ADVT+ +S GY+G Y VT +SNR
Sbjct: 415 GDLYRSGSVYGDSTWRSGTPELEGSGSFGYGLSNIAADVTAKSSEGYIGSYGVTSRQSNR 474
Query: 379 GI 374
GI
Sbjct: 475 GI 476
>ref|XP_002308799.1| hypothetical protein POPTR_0006s01680g [Populus trichocarpa]
gi|222854775|gb|EEE92322.1| hypothetical protein
POPTR_0006s01680g [Populus trichocarpa]
Length = 476
Score = 64.7 bits (156), Expect = 1e-08
Identities = 33/63 (52%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Frame = -1
Query: 550 NLYGGDSFYQDHAWHSSSRELEGPATFGYGRGRATADVTSDNSVGYVGDYSVT--RSNRG 377
+ Y S Y D+ W SS EL+ +FG+G G AT+DV + NS GYVG YSV +SNRG
Sbjct: 414 DFYEKGSLYGDNTWQSSPSELDVSGSFGFGLGNATSDVMTKNSAGYVGGYSVANRQSNRG 473
Query: 376 IAA 368
IAA
Sbjct: 474 IAA 476