BLASTX nr result

ID: Rehmannia23_contig00025366 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00025366
         (378 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006344460.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    58   1e-06
ref|XP_004236256.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    58   1e-06
dbj|BAC23030.1| ring H2 zinc finger [Solanum tuberosum]                57   2e-06
ref|XP_004230173.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    56   6e-06
ref|XP_006361868.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    55   7e-06

>ref|XP_006344460.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Solanum
           tuberosum]
          Length = 398

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 39/73 (53%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
 Frame = -2

Query: 374 KSDRWGI------FTRGLSMRLRSPKVTADGGEASTPKRRGNRTPPSKLPSFKCLEPKAN 213
           KSDRW +      FTRG SM+  SPKV AD  EAST   R N     K+PSFKCLEPK  
Sbjct: 329 KSDRWFLKIAPPFFTRGSSMK--SPKVRADNEEASTS--RSNVKVAVKMPSFKCLEPK-- 382

Query: 212 DGDETRLFSDESA 174
            GDE  L +++SA
Sbjct: 383 -GDEPGLLANDSA 394


>ref|XP_004236256.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Solanum
           lycopersicum]
          Length = 398

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 39/73 (53%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
 Frame = -2

Query: 374 KSDRWGI------FTRGLSMRLRSPKVTADGGEASTPKRRGNRTPPSKLPSFKCLEPKAN 213
           KSDRW +      FTRG SM+  SPKV AD  EAST   R N     KLPSF+CLEPK  
Sbjct: 329 KSDRWFLKIAPPFFTRGSSMK--SPKVRADNEEASTS--RSNMKVAVKLPSFQCLEPK-- 382

Query: 212 DGDETRLFSDESA 174
            GDE  L +++SA
Sbjct: 383 -GDEPGLMANDSA 394


>dbj|BAC23030.1| ring H2 zinc finger [Solanum tuberosum]
          Length = 154

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 38/73 (52%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
 Frame = -2

Query: 374 KSDRWGI------FTRGLSMRLRSPKVTADGGEASTPKRRGNRTPPSKLPSFKCLEPKAN 213
           KSDRW +      FTRG SM+  SPK+ AD  EAST   R N     K+PSFKCLEPK  
Sbjct: 85  KSDRWFLKIAPPFFTRGSSMK--SPKLRADNEEASTS--RSNVKVAVKMPSFKCLEPK-- 138

Query: 212 DGDETRLFSDESA 174
            GDE  L +++SA
Sbjct: 139 -GDEPGLLANDSA 150


>ref|XP_004230173.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Solanum
           lycopersicum]
          Length = 432

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 37/73 (50%), Positives = 43/73 (58%), Gaps = 6/73 (8%)
 Frame = -2

Query: 374 KSDRW------GIFTRGLSMRLRSPKVTADGGEASTPKRRGNRTPPSKLPSFKCLEPKAN 213
           KSDRW        F+RG SM+  SP+V A+ GE ST    G+     KLPSFKCLEPK  
Sbjct: 364 KSDRWIFTMTPPFFSRGSSMK--SPRVGAEAGEGSTS---GSMRTAVKLPSFKCLEPK-- 416

Query: 212 DGDETRLFSDESA 174
            GDE  L S +SA
Sbjct: 417 -GDEASLMSTDSA 428


>ref|XP_006361868.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Solanum
           tuberosum]
          Length = 433

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 37/73 (50%), Positives = 43/73 (58%), Gaps = 6/73 (8%)
 Frame = -2

Query: 374 KSDRW------GIFTRGLSMRLRSPKVTADGGEASTPKRRGNRTPPSKLPSFKCLEPKAN 213
           KSDRW        F+RG SM+  SP+V A+ GE ST    G+     KLPSFKCLEPK  
Sbjct: 365 KSDRWIFTMAPPFFSRGSSMK--SPRVGAEAGEGSTS---GSLRTAVKLPSFKCLEPK-- 417

Query: 212 DGDETRLFSDESA 174
            GDE  L S +SA
Sbjct: 418 -GDEASLMSTDSA 429


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