BLASTX nr result
ID: Rehmannia23_contig00025366
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia23_contig00025366 (378 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006344460.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-... 58 1e-06 ref|XP_004236256.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-... 58 1e-06 dbj|BAC23030.1| ring H2 zinc finger [Solanum tuberosum] 57 2e-06 ref|XP_004230173.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-... 56 6e-06 ref|XP_006361868.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-... 55 7e-06 >ref|XP_006344460.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Solanum tuberosum] Length = 398 Score = 58.2 bits (139), Expect = 1e-06 Identities = 39/73 (53%), Positives = 45/73 (61%), Gaps = 6/73 (8%) Frame = -2 Query: 374 KSDRWGI------FTRGLSMRLRSPKVTADGGEASTPKRRGNRTPPSKLPSFKCLEPKAN 213 KSDRW + FTRG SM+ SPKV AD EAST R N K+PSFKCLEPK Sbjct: 329 KSDRWFLKIAPPFFTRGSSMK--SPKVRADNEEASTS--RSNVKVAVKMPSFKCLEPK-- 382 Query: 212 DGDETRLFSDESA 174 GDE L +++SA Sbjct: 383 -GDEPGLLANDSA 394 >ref|XP_004236256.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Solanum lycopersicum] Length = 398 Score = 58.2 bits (139), Expect = 1e-06 Identities = 39/73 (53%), Positives = 45/73 (61%), Gaps = 6/73 (8%) Frame = -2 Query: 374 KSDRWGI------FTRGLSMRLRSPKVTADGGEASTPKRRGNRTPPSKLPSFKCLEPKAN 213 KSDRW + FTRG SM+ SPKV AD EAST R N KLPSF+CLEPK Sbjct: 329 KSDRWFLKIAPPFFTRGSSMK--SPKVRADNEEASTS--RSNMKVAVKLPSFQCLEPK-- 382 Query: 212 DGDETRLFSDESA 174 GDE L +++SA Sbjct: 383 -GDEPGLMANDSA 394 >dbj|BAC23030.1| ring H2 zinc finger [Solanum tuberosum] Length = 154 Score = 57.0 bits (136), Expect = 2e-06 Identities = 38/73 (52%), Positives = 45/73 (61%), Gaps = 6/73 (8%) Frame = -2 Query: 374 KSDRWGI------FTRGLSMRLRSPKVTADGGEASTPKRRGNRTPPSKLPSFKCLEPKAN 213 KSDRW + FTRG SM+ SPK+ AD EAST R N K+PSFKCLEPK Sbjct: 85 KSDRWFLKIAPPFFTRGSSMK--SPKLRADNEEASTS--RSNVKVAVKMPSFKCLEPK-- 138 Query: 212 DGDETRLFSDESA 174 GDE L +++SA Sbjct: 139 -GDEPGLLANDSA 150 >ref|XP_004230173.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Solanum lycopersicum] Length = 432 Score = 55.8 bits (133), Expect = 6e-06 Identities = 37/73 (50%), Positives = 43/73 (58%), Gaps = 6/73 (8%) Frame = -2 Query: 374 KSDRW------GIFTRGLSMRLRSPKVTADGGEASTPKRRGNRTPPSKLPSFKCLEPKAN 213 KSDRW F+RG SM+ SP+V A+ GE ST G+ KLPSFKCLEPK Sbjct: 364 KSDRWIFTMTPPFFSRGSSMK--SPRVGAEAGEGSTS---GSMRTAVKLPSFKCLEPK-- 416 Query: 212 DGDETRLFSDESA 174 GDE L S +SA Sbjct: 417 -GDEASLMSTDSA 428 >ref|XP_006361868.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Solanum tuberosum] Length = 433 Score = 55.5 bits (132), Expect = 7e-06 Identities = 37/73 (50%), Positives = 43/73 (58%), Gaps = 6/73 (8%) Frame = -2 Query: 374 KSDRW------GIFTRGLSMRLRSPKVTADGGEASTPKRRGNRTPPSKLPSFKCLEPKAN 213 KSDRW F+RG SM+ SP+V A+ GE ST G+ KLPSFKCLEPK Sbjct: 365 KSDRWIFTMAPPFFSRGSSMK--SPRVGAEAGEGSTS---GSLRTAVKLPSFKCLEPK-- 417 Query: 212 DGDETRLFSDESA 174 GDE L S +SA Sbjct: 418 -GDEASLMSTDSA 429