BLASTX nr result

ID: Rehmannia23_contig00025305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00025305
         (386 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520335.1| DNA binding protein, putative [Ricinus commu...    57   3e-06
gb|EOY16366.1| SWITCH/sucrose nonfermenting 3C [Theobroma cacao]       56   6e-06
ref|XP_002306648.1| SWIRM domain-containing family protein [Popu...    56   6e-06
ref|XP_006472818.1| PREDICTED: SWI/SNF complex subunit SWI3C-lik...    55   1e-05
ref|XP_006434250.1| hypothetical protein CICLE_v10000405mg [Citr...    55   1e-05
ref|XP_006434249.1| hypothetical protein CICLE_v10000405mg [Citr...    55   1e-05

>ref|XP_002520335.1| DNA binding protein, putative [Ricinus communis]
           gi|223540554|gb|EEF42121.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 771

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/58 (44%), Positives = 37/58 (63%)
 Frame = +2

Query: 203 DDDPHNNRGYRANQMSREKESEMLVDGGLRICEFPIAIKRVVNRPHSLVFGIVEAERA 376
           D +P+ N     N    + E+E+++DGG+RIC+FP   K +VNRPH+ V  IV  ERA
Sbjct: 65  DPNPNPNPNSNHNPTQPDHETEVVIDGGVRICDFPCVTKLLVNRPHASVSAIVALERA 122


>gb|EOY16366.1| SWITCH/sucrose nonfermenting 3C [Theobroma cacao]
          Length = 779

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/39 (66%), Positives = 29/39 (74%)
 Frame = +2

Query: 260 ESEMLVDGGLRICEFPIAIKRVVNRPHSLVFGIVEAERA 376
           ESE+L DGG+RI EFP  +KR VNRPH  V  IV AERA
Sbjct: 73  ESEVLADGGVRISEFPAVVKRTVNRPHGSVMAIVAAERA 111


>ref|XP_002306648.1| SWIRM domain-containing family protein [Populus trichocarpa]
           gi|222856097|gb|EEE93644.1| SWIRM domain-containing
           family protein [Populus trichocarpa]
          Length = 796

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/60 (45%), Positives = 39/60 (65%)
 Frame = +2

Query: 197 ETDDDPHNNRGYRANQMSREKESEMLVDGGLRICEFPIAIKRVVNRPHSLVFGIVEAERA 376
           E  DDP+ N+   +      +E+E+L+DGG+R+C+FP   +  VNRPH+ V  IV AERA
Sbjct: 62  EDSDDPNPNQ-QPSGPDPNPQETEVLIDGGVRLCDFPPVTRLAVNRPHASVMAIVAAERA 120


>ref|XP_006472818.1| PREDICTED: SWI/SNF complex subunit SWI3C-like [Citrus sinensis]
          Length = 773

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/39 (64%), Positives = 30/39 (76%)
 Frame = +2

Query: 260 ESEMLVDGGLRICEFPIAIKRVVNRPHSLVFGIVEAERA 376
           E+E+L+DGG RICEFP A++RVVNRPH  V  IV  E A
Sbjct: 76  ETEVLIDGGTRICEFPTAVQRVVNRPHVSVMDIVAIEAA 114


>ref|XP_006434250.1| hypothetical protein CICLE_v10000405mg [Citrus clementina]
           gi|557536372|gb|ESR47490.1| hypothetical protein
           CICLE_v10000405mg [Citrus clementina]
          Length = 731

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/39 (64%), Positives = 30/39 (76%)
 Frame = +2

Query: 260 ESEMLVDGGLRICEFPIAIKRVVNRPHSLVFGIVEAERA 376
           E+E+L+DGG RICEFP A++RVVNRPH  V  IV  E A
Sbjct: 76  ETEVLIDGGTRICEFPTAVQRVVNRPHVSVMDIVAIEAA 114


>ref|XP_006434249.1| hypothetical protein CICLE_v10000405mg [Citrus clementina]
           gi|557536371|gb|ESR47489.1| hypothetical protein
           CICLE_v10000405mg [Citrus clementina]
          Length = 576

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/39 (64%), Positives = 30/39 (76%)
 Frame = +2

Query: 260 ESEMLVDGGLRICEFPIAIKRVVNRPHSLVFGIVEAERA 376
           E+E+L+DGG RICEFP A++RVVNRPH  V  IV  E A
Sbjct: 76  ETEVLIDGGTRICEFPTAVQRVVNRPHVSVMDIVAIEAA 114


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