BLASTX nr result
ID: Rehmannia23_contig00025002
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00025002
(330 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK21876.1| unknown [Picea sitchensis] gi|116782420|gb|ABK224... 85 1e-14
gb|ABK22359.1| unknown [Picea sitchensis] 85 1e-14
gb|ABK21852.1| unknown [Picea sitchensis] 85 1e-14
gb|ABK21347.1| unknown [Picea sitchensis] gi|116780861|gb|ABK218... 85 1e-14
gb|ABK26083.1| unknown [Picea sitchensis] 84 3e-14
gb|EMT25898.1| Ribulose bisphosphate carboxylase small chain PWS... 83 4e-14
gb|AAF06100.1| ribulose 1,5-bisphosphate carboxylase small chain... 82 6e-14
gb|ABK21690.1| unknown [Picea sitchensis] 82 6e-14
gb|AAF06098.1| ribulose 1,5-bisphosphate carboxylase small chain... 82 7e-14
gb|ABK25759.1| unknown [Picea sitchensis] 82 1e-13
sp|P19312.1|RBS6_LEMGI RecName: Full=Ribulose bisphosphate carbo... 81 1e-13
sp|Q41373.1|RBS_SACHY RecName: Full=Ribulose bisphosphate carbox... 81 1e-13
gb|AGJ76629.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 81 1e-13
ref|XP_004303137.1| PREDICTED: ribulose bisphosphate carboxylase... 81 1e-13
gb|AFO59569.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 81 1e-13
gb|ACN40169.1| unknown [Picea sitchensis] 81 1e-13
gb|ACN40080.1| unknown [Picea sitchensis] 81 1e-13
gb|ACN39774.1| unknown [Picea sitchensis] 81 1e-13
gb|ABR16912.1| unknown [Picea sitchensis] 81 1e-13
gb|ABK21447.1| unknown [Picea sitchensis] gi|116780594|gb|ABK217... 81 1e-13
>gb|ABK21876.1| unknown [Picea sitchensis] gi|116782420|gb|ABK22499.1| unknown
[Picea sitchensis] gi|116784603|gb|ABK23405.1| unknown
[Picea sitchensis] gi|116793621|gb|ABK26814.1| unknown
[Picea sitchensis] gi|116793637|gb|ABK26822.1| unknown
[Picea sitchensis] gi|116794195|gb|ABK27041.1| unknown
[Picea sitchensis] gi|148907673|gb|ABR16965.1| unknown
[Picea sitchensis] gi|224285721|gb|ACN40576.1| unknown
[Picea sitchensis]
Length = 193
Score = 84.7 bits (208), Expect = 1e-14
Identities = 39/71 (54%), Positives = 50/71 (70%)
Frame = +3
Query: 114 LELSKAPSSVAKGIKKSASTTKAMLVWPNKDMVKFETLSYLPPLTQEQLSKEIDYLLRNK 293
+++S A + + + + M VWP + KFETLSYLP LTQEQL KE++YLLRNK
Sbjct: 49 MKISNAGAEWERKTTSNGGRVRCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLRNK 108
Query: 294 WVPCLEFDEEG 326
WVPCLEFDE+G
Sbjct: 109 WVPCLEFDEDG 119
>gb|ABK22359.1| unknown [Picea sitchensis]
Length = 193
Score = 84.7 bits (208), Expect = 1e-14
Identities = 39/71 (54%), Positives = 50/71 (70%)
Frame = +3
Query: 114 LELSKAPSSVAKGIKKSASTTKAMLVWPNKDMVKFETLSYLPPLTQEQLSKEIDYLLRNK 293
+++S A + + + + M VWP + KFETLSYLP LTQEQL KE++YLLRNK
Sbjct: 49 MKISNAGAEWERKTTSNGGRVRCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLRNK 108
Query: 294 WVPCLEFDEEG 326
WVPCLEFDE+G
Sbjct: 109 WVPCLEFDEDG 119
>gb|ABK21852.1| unknown [Picea sitchensis]
Length = 193
Score = 84.7 bits (208), Expect = 1e-14
Identities = 39/71 (54%), Positives = 50/71 (70%)
Frame = +3
Query: 114 LELSKAPSSVAKGIKKSASTTKAMLVWPNKDMVKFETLSYLPPLTQEQLSKEIDYLLRNK 293
+++S A + + + + M VWP + KFETLSYLP LTQEQL KE++YLLRNK
Sbjct: 49 MKISNAGAEWERKTTSNGGRVRCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLRNK 108
Query: 294 WVPCLEFDEEG 326
WVPCLEFDE+G
Sbjct: 109 WVPCLEFDEDG 119
>gb|ABK21347.1| unknown [Picea sitchensis] gi|116780861|gb|ABK21851.1| unknown
[Picea sitchensis] gi|148905962|gb|ABR16142.1| unknown
[Picea sitchensis] gi|224284092|gb|ACN39783.1| unknown
[Picea sitchensis] gi|224284864|gb|ACN40162.1| unknown
[Picea sitchensis] gi|224285028|gb|ACN40243.1| unknown
[Picea sitchensis]
Length = 195
Score = 84.7 bits (208), Expect = 1e-14
Identities = 39/71 (54%), Positives = 50/71 (70%)
Frame = +3
Query: 114 LELSKAPSSVAKGIKKSASTTKAMLVWPNKDMVKFETLSYLPPLTQEQLSKEIDYLLRNK 293
+++S A + + + + M VWP + KFETLSYLP LTQEQL KE++YLLRNK
Sbjct: 51 MKISNAGAEWERKTTSNGGRVRCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLRNK 110
Query: 294 WVPCLEFDEEG 326
WVPCLEFDE+G
Sbjct: 111 WVPCLEFDEDG 121
>gb|ABK26083.1| unknown [Picea sitchensis]
Length = 159
Score = 83.6 bits (205), Expect = 3e-14
Identities = 41/67 (61%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Frame = +3
Query: 129 APSSVAKGIKKS-ASTTKAMLVWPNKDMVKFETLSYLPPLTQEQLSKEIDYLLRNKWVPC 305
AP + G S + M VWP + KFETLSYLP LTQEQL KE++YLLRNKWVPC
Sbjct: 19 APPKTSNGNGSSNGGRVRCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLRNKWVPC 78
Query: 306 LEFDEEG 326
LEFDE+G
Sbjct: 79 LEFDEDG 85
>gb|EMT25898.1| Ribulose bisphosphate carboxylase small chain PWS4.3, chloroplastic
[Aegilops tauschii]
Length = 170
Score = 82.8 bits (203), Expect = 4e-14
Identities = 37/71 (52%), Positives = 50/71 (70%)
Frame = +3
Query: 114 LELSKAPSSVAKGIKKSASTTKAMLVWPNKDMVKFETLSYLPPLTQEQLSKEIDYLLRNK 293
L +S+APS + G + + M VWP + + KFETLSYLPPL+ E L K++DYL+R+K
Sbjct: 20 LPVSRAPSGASLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSK 79
Query: 294 WVPCLEFDEEG 326
WVPCLEF + G
Sbjct: 80 WVPCLEFSKVG 90
>gb|AAF06100.1| ribulose 1,5-bisphosphate carboxylase small chain precursor
[Manihot esculenta]
Length = 184
Score = 82.4 bits (202), Expect = 6e-14
Identities = 42/89 (47%), Positives = 56/89 (62%), Gaps = 9/89 (10%)
Frame = +3
Query: 84 APAKTSLMRPLELSKAPSSVAKGIKKSASTT---------KAMLVWPNKDMVKFETLSYL 236
+PA+ S++ P K+ S+ K SA T + M VWP + KFETLSYL
Sbjct: 18 SPAQASMVAPFTGLKSTSAFTATTKTSADITSLASNGGRVQCMQVWPTRGKKKFETLSYL 77
Query: 237 PPLTQEQLSKEIDYLLRNKWVPCLEFDEE 323
PPL++EQL+ EIDYLLR+ W+PCLEF+ E
Sbjct: 78 PPLSREQLASEIDYLLRSGWIPCLEFELE 106
>gb|ABK21690.1| unknown [Picea sitchensis]
Length = 194
Score = 82.4 bits (202), Expect = 6e-14
Identities = 37/71 (52%), Positives = 50/71 (70%)
Frame = +3
Query: 114 LELSKAPSSVAKGIKKSASTTKAMLVWPNKDMVKFETLSYLPPLTQEQLSKEIDYLLRNK 293
++ + A + + + + + M VWP + KFETLSYLP LTQEQL KE++YLL+NK
Sbjct: 50 MKTNNAGAELEQKTTSNGGRVRCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLKNK 109
Query: 294 WVPCLEFDEEG 326
WVPCLEFDE+G
Sbjct: 110 WVPCLEFDEDG 120
>gb|AAF06098.1| ribulose 1,5-bisphosphate carboxylase small chain precursor
[Manihot esculenta] gi|6272551|gb|AAF06101.1| ribulose
1,5-bisphosphate carboxylase small chain precursor
[Manihot esculenta]
Length = 184
Score = 82.0 bits (201), Expect = 7e-14
Identities = 42/89 (47%), Positives = 56/89 (62%), Gaps = 9/89 (10%)
Frame = +3
Query: 84 APAKTSLMRPLELSKAPSSVAKGIKKSASTT---------KAMLVWPNKDMVKFETLSYL 236
+PA+ S++ P K+ S+ K SA T + M VWP + KFETLSYL
Sbjct: 18 SPAQASMVAPFTGLKSTSAFPATTKTSADITSLASNGGRVQCMQVWPTRGKKKFETLSYL 77
Query: 237 PPLTQEQLSKEIDYLLRNKWVPCLEFDEE 323
PPL++EQL+ EIDYLLR+ W+PCLEF+ E
Sbjct: 78 PPLSREQLASEIDYLLRSGWIPCLEFELE 106
>gb|ABK25759.1| unknown [Picea sitchensis]
Length = 142
Score = 81.6 bits (200), Expect = 1e-13
Identities = 38/69 (55%), Positives = 48/69 (69%)
Frame = +3
Query: 114 LELSKAPSSVAKGIKKSASTTKAMLVWPNKDMVKFETLSYLPPLTQEQLSKEIDYLLRNK 293
+++S A + + + + M VWP + KFETLSYLP LTQEQL KE++YLLRNK
Sbjct: 51 MKISNAGAEWERKTTSNGGRVRCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLRNK 110
Query: 294 WVPCLEFDE 320
WVPCLEFDE
Sbjct: 111 WVPCLEFDE 119
>sp|P19312.1|RBS6_LEMGI RecName: Full=Ribulose bisphosphate carboxylase small chain SSU5B,
chloroplastic; Short=RuBisCO small subunit SSU5B; Flags:
Precursor gi|295821|emb|CAA35100.1| ribulose
bisphosphate carboxylase [Lemna gibba]
Length = 177
Score = 81.3 bits (199), Expect = 1e-13
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 9/91 (9%)
Frame = +3
Query: 81 VAPAKTSLMRP---LELSKAPSSVAKG------IKKSASTTKAMLVWPNKDMVKFETLSY 233
V PA+T+++ P L S A + K + + M VWP + + KFETLSY
Sbjct: 15 VGPAQTNMVAPFNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSY 74
Query: 234 LPPLTQEQLSKEIDYLLRNKWVPCLEFDEEG 326
LPPL+ E L+KE+DYLLRN WVPC+EF +EG
Sbjct: 75 LPPLSVEDLAKEVDYLLRNDWVPCIEFSKEG 105
>sp|Q41373.1|RBS_SACHY RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|485507|pir||S33613 ribulose-bisphosphate
carboxylase (EC 4.1.1.39) small chain precursor -
sugarcane gi|169842|gb|AAA33922.1| ribulose
1,5-bisphosphate carboxylase/oxygenase small subunit
[Saccharum hybrid cultivar H32-8560]
Length = 168
Score = 81.3 bits (199), Expect = 1e-13
Identities = 39/67 (58%), Positives = 48/67 (71%)
Frame = +3
Query: 126 KAPSSVAKGIKKSASTTKAMLVWPNKDMVKFETLSYLPPLTQEQLSKEIDYLLRNKWVPC 305
++ +S+AK + + M VWP KFETLSYLPPLTQEQL K++DYLLRN WVPC
Sbjct: 30 RSTTSLAK--VSNGGRIRCMQVWPAYGNKKFETLSYLPPLTQEQLLKQVDYLLRNNWVPC 87
Query: 306 LEFDEEG 326
LEF +EG
Sbjct: 88 LEFSKEG 94
>gb|AGJ76629.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Echinochloa crus-galli]
Length = 170
Score = 81.3 bits (199), Expect = 1e-13
Identities = 37/71 (52%), Positives = 49/71 (69%)
Frame = +3
Query: 114 LELSKAPSSVAKGIKKSASTTKAMLVWPNKDMVKFETLSYLPPLTQEQLSKEIDYLLRNK 293
L +S+ +S G + + M +WP ++ KFETLSYLPPLTQE+L K+IDYL+RN
Sbjct: 25 LPVSRRTTSTGFGNVSNGGRIRCMQIWPVENNKKFETLSYLPPLTQEELLKQIDYLIRNN 84
Query: 294 WVPCLEFDEEG 326
WVPCLEF + G
Sbjct: 85 WVPCLEFSKIG 95
>ref|XP_004303137.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 182
Score = 81.3 bits (199), Expect = 1e-13
Identities = 42/89 (47%), Positives = 56/89 (62%), Gaps = 9/89 (10%)
Frame = +3
Query: 84 APAKTSLMRPLELSKAPSSVAKGIKKSASTT---------KAMLVWPNKDMVKFETLSYL 236
+PA+ S++ P K+ S+ K ++ T + M VWP + KFETLSYL
Sbjct: 18 SPAQASMVAPFTGLKSASAFPITRKTNSDITSLPSNGGRVQCMQVWPPVGLKKFETLSYL 77
Query: 237 PPLTQEQLSKEIDYLLRNKWVPCLEFDEE 323
PPLT E L+KE+D+LLRNKWVPCLEF+ E
Sbjct: 78 PPLTSESLAKEVDFLLRNKWVPCLEFELE 106
>gb|AFO59569.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Saccharum hybrid cultivar GT28]
Length = 169
Score = 81.3 bits (199), Expect = 1e-13
Identities = 39/67 (58%), Positives = 48/67 (71%)
Frame = +3
Query: 126 KAPSSVAKGIKKSASTTKAMLVWPNKDMVKFETLSYLPPLTQEQLSKEIDYLLRNKWVPC 305
++ +S+AK + + M VWP KFETLSYLPPLTQEQL K++DYLLRN WVPC
Sbjct: 30 RSTTSLAK--VSNGGRIRCMQVWPAYGNKKFETLSYLPPLTQEQLLKQVDYLLRNNWVPC 87
Query: 306 LEFDEEG 326
LEF +EG
Sbjct: 88 LEFSKEG 94
>gb|ACN40169.1| unknown [Picea sitchensis]
Length = 194
Score = 81.3 bits (199), Expect = 1e-13
Identities = 36/50 (72%), Positives = 42/50 (84%)
Frame = +3
Query: 177 KAMLVWPNKDMVKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEG 326
+ M VWP + KFETLSYLP LTQEQL KE++YLL+NKWVPCLEFDE+G
Sbjct: 71 RCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLKNKWVPCLEFDEDG 120
>gb|ACN40080.1| unknown [Picea sitchensis]
Length = 183
Score = 81.3 bits (199), Expect = 1e-13
Identities = 36/50 (72%), Positives = 42/50 (84%)
Frame = +3
Query: 177 KAMLVWPNKDMVKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEG 326
+ M VWP + KFETLSYLP LTQEQL KE++YLL+NKWVPCLEFDE+G
Sbjct: 60 RCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLKNKWVPCLEFDEDG 109
>gb|ACN39774.1| unknown [Picea sitchensis]
Length = 136
Score = 81.3 bits (199), Expect = 1e-13
Identities = 36/50 (72%), Positives = 42/50 (84%)
Frame = +3
Query: 177 KAMLVWPNKDMVKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEG 326
+ M VWP + KFETLSYLP LTQEQL KE++YLL+NKWVPCLEFDE+G
Sbjct: 13 RCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLKNKWVPCLEFDEDG 62
>gb|ABR16912.1| unknown [Picea sitchensis]
Length = 188
Score = 81.3 bits (199), Expect = 1e-13
Identities = 36/50 (72%), Positives = 42/50 (84%)
Frame = +3
Query: 177 KAMLVWPNKDMVKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEG 326
+ M VWP + KFETLSYLP LTQEQL KE++YLL+NKWVPCLEFDE+G
Sbjct: 71 RCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLKNKWVPCLEFDEDG 120
>gb|ABK21447.1| unknown [Picea sitchensis] gi|116780594|gb|ABK21733.1| unknown
[Picea sitchensis] gi|116782047|gb|ABK22347.1| unknown
[Picea sitchensis] gi|116783228|gb|ABK22845.1| unknown
[Picea sitchensis] gi|116785645|gb|ABK23805.1| unknown
[Picea sitchensis] gi|116785985|gb|ABK23931.1| unknown
[Picea sitchensis] gi|116786044|gb|ABK23949.1| unknown
[Picea sitchensis] gi|116790039|gb|ABK25479.1| unknown
[Picea sitchensis] gi|116793644|gb|ABK26825.1| unknown
[Picea sitchensis] gi|224284814|gb|ACN40137.1| unknown
[Picea sitchensis] gi|224285468|gb|ACN40456.1| unknown
[Picea sitchensis] gi|224285619|gb|ACN40528.1| unknown
[Picea sitchensis] gi|224285683|gb|ACN40557.1| unknown
[Picea sitchensis]
Length = 194
Score = 81.3 bits (199), Expect = 1e-13
Identities = 36/50 (72%), Positives = 42/50 (84%)
Frame = +3
Query: 177 KAMLVWPNKDMVKFETLSYLPPLTQEQLSKEIDYLLRNKWVPCLEFDEEG 326
+ M VWP + KFETLSYLP LTQEQL KE++YLL+NKWVPCLEFDE+G
Sbjct: 71 RCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLKNKWVPCLEFDEDG 120