BLASTX nr result
ID: Rehmannia23_contig00024161
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00024161
(341 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006351314.1| PREDICTED: exosome complex component RRP43 [... 154 9e-36
ref|XP_006381009.1| hypothetical protein POPTR_0006s04970g [Popu... 149 3e-34
ref|XP_002308947.1| 3' exoribonuclease domain 1-containing famil... 149 3e-34
ref|NP_001275073.1| 3'-5'-exoribonuclease/RNA binding protein-li... 147 1e-33
ref|XP_004241263.1| PREDICTED: exosome complex component RRP43-l... 145 4e-33
ref|NP_001275445.1| 3'-5'-exoribonuclease/RNA binding-like prote... 145 4e-33
emb|CBI29839.3| unnamed protein product [Vitis vinifera] 145 5e-33
ref|XP_002284088.1| PREDICTED: exosome complex component RRP43-l... 145 5e-33
gb|EOY09233.1| 3'-5'-exoribonuclease family protein [Theobroma c... 145 7e-33
ref|XP_002532079.1| exosome complex exonuclease rrp43, putative ... 144 2e-32
ref|XP_006365748.1| PREDICTED: exosome complex component RRP43 i... 143 2e-32
ref|XP_004149399.1| PREDICTED: exosome complex component RRP43-l... 142 6e-32
emb|CAN82224.1| hypothetical protein VITISV_011872 [Vitis vinifera] 141 8e-32
ref|XP_006489986.1| PREDICTED: exosome complex component RRP43-l... 141 1e-31
ref|XP_006421389.1| hypothetical protein CICLE_v10005512mg [Citr... 141 1e-31
ref|XP_006373782.1| hypothetical protein POPTR_0016s05590g [Popu... 140 2e-31
gb|EMJ03572.1| hypothetical protein PRUPE_ppa009278mg [Prunus pe... 140 2e-31
ref|XP_004304353.1| PREDICTED: exosome complex component RRP43-l... 136 3e-30
ref|XP_003531860.1| PREDICTED: exosome complex component RRP43-l... 135 6e-30
ref|XP_002322717.1| 3' exoribonuclease domain 1-containing famil... 134 1e-29
>ref|XP_006351314.1| PREDICTED: exosome complex component RRP43 [Solanum tuberosum]
Length = 303
Score = 154 bits (390), Expect = 9e-36
Identities = 74/94 (78%), Positives = 86/94 (91%)
Frame = -3
Query: 336 DKRKLKLNNIPFSLTCILHKDYILADPTSEEESIMETYLTVVLDSSFQLVSFNKPGGPGL 157
+KRKLKLN++PFSLTCILHK+YILADPT+EEESIMET +T+VLDSS+QLVS NKPGGP L
Sbjct: 210 EKRKLKLNSLPFSLTCILHKNYILADPTAEEESIMETIVTMVLDSSYQLVSLNKPGGPVL 269
Query: 156 ANTSAIQDCVTLTRRRVKELQKILNETISDMEVD 55
++TS IQDC+ L RRRVKELQ +LNE ISDMEVD
Sbjct: 270 SHTSVIQDCIALARRRVKELQSVLNEAISDMEVD 303
>ref|XP_006381009.1| hypothetical protein POPTR_0006s04970g [Populus trichocarpa]
gi|550335486|gb|ERP58806.1| hypothetical protein
POPTR_0006s04970g [Populus trichocarpa]
Length = 303
Score = 149 bits (377), Expect = 3e-34
Identities = 75/95 (78%), Positives = 86/95 (90%)
Frame = -3
Query: 339 KDKRKLKLNNIPFSLTCILHKDYILADPTSEEESIMETYLTVVLDSSFQLVSFNKPGGPG 160
K+KRKL L++IPFSLTCILHK+YILADPT+EEESIMET +TVVLDSS +LVSF KPGGP
Sbjct: 209 KEKRKLTLSSIPFSLTCILHKNYILADPTAEEESIMETLVTVVLDSSSRLVSFYKPGGPV 268
Query: 159 LANTSAIQDCVTLTRRRVKELQKILNETISDMEVD 55
LA TSA+QDCV LTR+RVKELQ IL+ETIS ME+D
Sbjct: 269 LAQTSAVQDCVALTRQRVKELQDILDETISGMEID 303
>ref|XP_002308947.1| 3' exoribonuclease domain 1-containing family protein [Populus
trichocarpa] gi|222854923|gb|EEE92470.1| 3'
exoribonuclease domain 1-containing family protein
[Populus trichocarpa]
Length = 318
Score = 149 bits (377), Expect = 3e-34
Identities = 75/95 (78%), Positives = 86/95 (90%)
Frame = -3
Query: 339 KDKRKLKLNNIPFSLTCILHKDYILADPTSEEESIMETYLTVVLDSSFQLVSFNKPGGPG 160
K+KRKL L++IPFSLTCILHK+YILADPT+EEESIMET +TVVLDSS +LVSF KPGGP
Sbjct: 224 KEKRKLTLSSIPFSLTCILHKNYILADPTAEEESIMETLVTVVLDSSSRLVSFYKPGGPV 283
Query: 159 LANTSAIQDCVTLTRRRVKELQKILNETISDMEVD 55
LA TSA+QDCV LTR+RVKELQ IL+ETIS ME+D
Sbjct: 284 LAQTSAVQDCVALTRQRVKELQDILDETISGMEID 318
>ref|NP_001275073.1| 3'-5'-exoribonuclease/RNA binding protein-like protein [Solanum
tuberosum] gi|83283957|gb|ABC01886.1|
3'-5'-exoribonuclease/RNA binding protein-like protein
[Solanum tuberosum]
Length = 314
Score = 147 bits (372), Expect = 1e-33
Identities = 72/93 (77%), Positives = 82/93 (88%)
Frame = -3
Query: 336 DKRKLKLNNIPFSLTCILHKDYILADPTSEEESIMETYLTVVLDSSFQLVSFNKPGGPGL 157
+KRKLKLN++PFSLTCILHK+YILADPT+EEE IMET +TVVLDSS QLVS NKPGGP L
Sbjct: 210 EKRKLKLNSLPFSLTCILHKNYILADPTAEEEPIMETIVTVVLDSSHQLVSLNKPGGPVL 269
Query: 156 ANTSAIQDCVTLTRRRVKELQKILNETISDMEV 58
++TS IQDC+ L RRR KELQ +LNE ISDMEV
Sbjct: 270 SHTSVIQDCIGLARRRAKELQSVLNEAISDMEV 302
>ref|XP_004241263.1| PREDICTED: exosome complex component RRP43-like [Solanum
lycopersicum]
Length = 303
Score = 145 bits (367), Expect = 4e-33
Identities = 72/94 (76%), Positives = 83/94 (88%)
Frame = -3
Query: 336 DKRKLKLNNIPFSLTCILHKDYILADPTSEEESIMETYLTVVLDSSFQLVSFNKPGGPGL 157
+KRKLKLN+ PFSLTC+LHK+YILADPT+EEESIMET +TVVLDSS+QLVS KPGGP
Sbjct: 210 EKRKLKLNSPPFSLTCLLHKNYILADPTAEEESIMETAVTVVLDSSYQLVSLYKPGGPVH 269
Query: 156 ANTSAIQDCVTLTRRRVKELQKILNETISDMEVD 55
A+TS IQDCV L +RRVKELQ +LNE ISDMEV+
Sbjct: 270 AHTSVIQDCVALAKRRVKELQSVLNEAISDMEVE 303
>ref|NP_001275445.1| 3'-5'-exoribonuclease/RNA binding-like protein [Solanum tuberosum]
gi|565400462|ref|XP_006365747.1| PREDICTED: exosome
complex component RRP43 isoform X2 [Solanum tuberosum]
gi|83283987|gb|ABC01901.1| 3'-5'-exoribonuclease/RNA
binding-like protein [Solanum tuberosum]
Length = 303
Score = 145 bits (367), Expect = 4e-33
Identities = 72/94 (76%), Positives = 83/94 (88%)
Frame = -3
Query: 336 DKRKLKLNNIPFSLTCILHKDYILADPTSEEESIMETYLTVVLDSSFQLVSFNKPGGPGL 157
+KRKLKLN+ PFSLTC+LHK+YILADPT+EEESIMET +TVVLDSS+QLVS KPGGP
Sbjct: 210 EKRKLKLNSPPFSLTCLLHKNYILADPTAEEESIMETAVTVVLDSSYQLVSLYKPGGPVH 269
Query: 156 ANTSAIQDCVTLTRRRVKELQKILNETISDMEVD 55
A+TS IQDCV L +RRVKELQ +LNE ISDMEV+
Sbjct: 270 AHTSVIQDCVALAKRRVKELQSVLNEAISDMEVE 303
>emb|CBI29839.3| unnamed protein product [Vitis vinifera]
Length = 311
Score = 145 bits (366), Expect = 5e-33
Identities = 73/95 (76%), Positives = 83/95 (87%)
Frame = -3
Query: 339 KDKRKLKLNNIPFSLTCILHKDYILADPTSEEESIMETYLTVVLDSSFQLVSFNKPGGPG 160
K KRKL L+++PFSLTCILHK+YILADPT+EEESIMET +TVVLDSS QLVS KPGGP
Sbjct: 217 KGKRKLTLSSLPFSLTCILHKNYILADPTAEEESIMETLVTVVLDSSGQLVSLYKPGGPV 276
Query: 159 LANTSAIQDCVTLTRRRVKELQKILNETISDMEVD 55
LA SA+QDC+ LTR+RVKEL+ ILNE ISDMEVD
Sbjct: 277 LAYASAVQDCIALTRQRVKELKSILNEAISDMEVD 311
>ref|XP_002284088.1| PREDICTED: exosome complex component RRP43-like [Vitis vinifera]
Length = 303
Score = 145 bits (366), Expect = 5e-33
Identities = 73/95 (76%), Positives = 83/95 (87%)
Frame = -3
Query: 339 KDKRKLKLNNIPFSLTCILHKDYILADPTSEEESIMETYLTVVLDSSFQLVSFNKPGGPG 160
K KRKL L+++PFSLTCILHK+YILADPT+EEESIMET +TVVLDSS QLVS KPGGP
Sbjct: 209 KGKRKLTLSSLPFSLTCILHKNYILADPTAEEESIMETLVTVVLDSSGQLVSLYKPGGPV 268
Query: 159 LANTSAIQDCVTLTRRRVKELQKILNETISDMEVD 55
LA SA+QDC+ LTR+RVKEL+ ILNE ISDMEVD
Sbjct: 269 LAYASAVQDCIALTRQRVKELKSILNEAISDMEVD 303
>gb|EOY09233.1| 3'-5'-exoribonuclease family protein [Theobroma cacao]
Length = 302
Score = 145 bits (365), Expect = 7e-33
Identities = 74/95 (77%), Positives = 83/95 (87%)
Frame = -3
Query: 339 KDKRKLKLNNIPFSLTCILHKDYILADPTSEEESIMETYLTVVLDSSFQLVSFNKPGGPG 160
K+KRKL L +IPFSLTCILHK+YILADPT+EEESIMET +T+VLDSS QLVS KPGGP
Sbjct: 208 KEKRKLTLCSIPFSLTCILHKNYILADPTAEEESIMETLVTIVLDSSSQLVSLYKPGGPV 267
Query: 159 LANTSAIQDCVTLTRRRVKELQKILNETISDMEVD 55
LA TSAIQDC+ +TR+RVKELQKIL E IS MEVD
Sbjct: 268 LAYTSAIQDCIAITRQRVKELQKILEEAISVMEVD 302
>ref|XP_002532079.1| exosome complex exonuclease rrp43, putative [Ricinus communis]
gi|223528261|gb|EEF30313.1| exosome complex exonuclease
rrp43, putative [Ricinus communis]
Length = 303
Score = 144 bits (362), Expect = 2e-32
Identities = 70/95 (73%), Positives = 84/95 (88%)
Frame = -3
Query: 339 KDKRKLKLNNIPFSLTCILHKDYILADPTSEEESIMETYLTVVLDSSFQLVSFNKPGGPG 160
K+KRKL L ++PFSLTC+LHK+YILADPT+EEESIMET +TVVLDSS +LVSF KPGGP
Sbjct: 209 KEKRKLTLRSLPFSLTCVLHKNYILADPTAEEESIMETLVTVVLDSSARLVSFYKPGGPV 268
Query: 159 LANTSAIQDCVTLTRRRVKELQKILNETISDMEVD 55
LA TSA+QDCV LTR+RVKELQ IL+E +S M++D
Sbjct: 269 LAYTSAVQDCVALTRQRVKELQNILDEALSGMQID 303
>ref|XP_006365748.1| PREDICTED: exosome complex component RRP43 isoform X3 [Solanum
tuberosum]
Length = 302
Score = 143 bits (361), Expect = 2e-32
Identities = 71/92 (77%), Positives = 81/92 (88%)
Frame = -3
Query: 336 DKRKLKLNNIPFSLTCILHKDYILADPTSEEESIMETYLTVVLDSSFQLVSFNKPGGPGL 157
+KRKLKLN+ PFSLTC+LHK+YILADPT+EEESIMET +TVVLDSS+QLVS KPGGP
Sbjct: 210 EKRKLKLNSPPFSLTCLLHKNYILADPTAEEESIMETAVTVVLDSSYQLVSLYKPGGPVH 269
Query: 156 ANTSAIQDCVTLTRRRVKELQKILNETISDME 61
A+TS IQDCV L +RRVKELQ +LNE ISDME
Sbjct: 270 AHTSVIQDCVALAKRRVKELQSVLNEAISDME 301
>ref|XP_004149399.1| PREDICTED: exosome complex component RRP43-like [Cucumis sativus]
gi|449503802|ref|XP_004162184.1| PREDICTED: exosome
complex component RRP43-like [Cucumis sativus]
Length = 304
Score = 142 bits (357), Expect = 6e-32
Identities = 71/95 (74%), Positives = 82/95 (86%)
Frame = -3
Query: 339 KDKRKLKLNNIPFSLTCILHKDYILADPTSEEESIMETYLTVVLDSSFQLVSFNKPGGPG 160
K+ RKLKLN+IPFSLTC+LHK YILADPT+EEES+MET +TVVLDSS QLVSF KPGG
Sbjct: 210 KENRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSV 269
Query: 159 LANTSAIQDCVTLTRRRVKELQKILNETISDMEVD 55
LA TSA+QDC+ LTR+R KELQ IL+E IS ME+D
Sbjct: 270 LAYTSAVQDCIALTRQRSKELQIILDEAISGMEID 304
>emb|CAN82224.1| hypothetical protein VITISV_011872 [Vitis vinifera]
Length = 1621
Score = 141 bits (356), Expect = 8e-32
Identities = 71/93 (76%), Positives = 81/93 (87%)
Frame = -3
Query: 339 KDKRKLKLNNIPFSLTCILHKDYILADPTSEEESIMETYLTVVLDSSFQLVSFNKPGGPG 160
K KRKL L+++PFSLTCILHK+YILADPT+EEESIMET +TVVLDSS QLVS KPGGP
Sbjct: 210 KGKRKLTLSSLPFSLTCILHKNYILADPTAEEESIMETLVTVVLDSSGQLVSLYKPGGPV 269
Query: 159 LANTSAIQDCVTLTRRRVKELQKILNETISDME 61
LA SA+QDC+ LTR+RVKEL+ ILNE ISDME
Sbjct: 270 LAYASAVQDCIALTRQRVKELKSILNEAISDME 302
>ref|XP_006489986.1| PREDICTED: exosome complex component RRP43-like isoform X1 [Citrus
sinensis] gi|568873742|ref|XP_006489987.1| PREDICTED:
exosome complex component RRP43-like isoform X2 [Citrus
sinensis]
Length = 302
Score = 141 bits (355), Expect = 1e-31
Identities = 72/95 (75%), Positives = 80/95 (84%)
Frame = -3
Query: 339 KDKRKLKLNNIPFSLTCILHKDYILADPTSEEESIMETYLTVVLDSSFQLVSFNKPGGPG 160
K+KRKL L IPFSLTCILHK+YILADPTSEEESIMET +TVVLDSS QLVS KPGG
Sbjct: 208 KEKRKLTLGGIPFSLTCILHKNYILADPTSEEESIMETLVTVVLDSSNQLVSLYKPGGAV 267
Query: 159 LANTSAIQDCVTLTRRRVKELQKILNETISDMEVD 55
LA TSA+QDC+ LTR+RVKEL +IL E IS ME+D
Sbjct: 268 LAYTSAVQDCIALTRQRVKELHQILEEAISGMEID 302
>ref|XP_006421389.1| hypothetical protein CICLE_v10005512mg [Citrus clementina]
gi|567857414|ref|XP_006421390.1| hypothetical protein
CICLE_v10005512mg [Citrus clementina]
gi|557523262|gb|ESR34629.1| hypothetical protein
CICLE_v10005512mg [Citrus clementina]
gi|557523263|gb|ESR34630.1| hypothetical protein
CICLE_v10005512mg [Citrus clementina]
Length = 302
Score = 141 bits (355), Expect = 1e-31
Identities = 72/95 (75%), Positives = 80/95 (84%)
Frame = -3
Query: 339 KDKRKLKLNNIPFSLTCILHKDYILADPTSEEESIMETYLTVVLDSSFQLVSFNKPGGPG 160
K+KRKL L IPFSLTCILHK+YILADPTSEEESIMET +TVVLDSS QLVS KPGG
Sbjct: 208 KEKRKLTLGGIPFSLTCILHKNYILADPTSEEESIMETLVTVVLDSSNQLVSLYKPGGAV 267
Query: 159 LANTSAIQDCVTLTRRRVKELQKILNETISDMEVD 55
LA TSA+QDC+ LTR+RVKEL +IL E IS ME+D
Sbjct: 268 LAYTSAVQDCIALTRQRVKELHQILEEAISGMEID 302
>ref|XP_006373782.1| hypothetical protein POPTR_0016s05590g [Populus trichocarpa]
gi|550320907|gb|ERP51579.1| hypothetical protein
POPTR_0016s05590g [Populus trichocarpa]
Length = 323
Score = 140 bits (353), Expect = 2e-31
Identities = 71/95 (74%), Positives = 83/95 (87%)
Frame = -3
Query: 339 KDKRKLKLNNIPFSLTCILHKDYILADPTSEEESIMETYLTVVLDSSFQLVSFNKPGGPG 160
K+KRKL L++IPFSLTCILHK+YILADPT+EEESIMET +TVVLDSS +LVSF KPGG
Sbjct: 229 KEKRKLTLSSIPFSLTCILHKNYILADPTAEEESIMETLVTVVLDSSARLVSFYKPGGSV 288
Query: 159 LANTSAIQDCVTLTRRRVKELQKILNETISDMEVD 55
A TSA++DCV LTR+RVKELQ+IL+E IS ME D
Sbjct: 289 FAYTSAVKDCVALTRQRVKELQEILDEAISGMETD 323
>gb|EMJ03572.1| hypothetical protein PRUPE_ppa009278mg [Prunus persica]
Length = 299
Score = 140 bits (352), Expect = 2e-31
Identities = 71/95 (74%), Positives = 81/95 (85%)
Frame = -3
Query: 339 KDKRKLKLNNIPFSLTCILHKDYILADPTSEEESIMETYLTVVLDSSFQLVSFNKPGGPG 160
K KRKL L++IPFSLTC+LHK+YILADPT+EEES+MET +TVVLDSS QLVS KPGGP
Sbjct: 205 KGKRKLTLSSIPFSLTCLLHKNYILADPTAEEESVMETLVTVVLDSSGQLVSLYKPGGPV 264
Query: 159 LANTSAIQDCVTLTRRRVKELQKILNETISDMEVD 55
LA TSAIQDCV LTR+R +ELQ IL+E S MEVD
Sbjct: 265 LAYTSAIQDCVALTRQRARELQTILDEVTSSMEVD 299
>ref|XP_004304353.1| PREDICTED: exosome complex component RRP43-like isoform 2 [Fragaria
vesca subsp. vesca]
Length = 300
Score = 136 bits (343), Expect = 3e-30
Identities = 71/95 (74%), Positives = 82/95 (86%)
Frame = -3
Query: 339 KDKRKLKLNNIPFSLTCILHKDYILADPTSEEESIMETYLTVVLDSSFQLVSFNKPGGPG 160
K+KRKL L +IPFSLTCIL+K++ILADPT+EEESIMET +TVVLDSS QLVS KPGGP
Sbjct: 206 KEKRKLTLCSIPFSLTCILYKNFILADPTAEEESIMETLVTVVLDSSGQLVSLYKPGGPV 265
Query: 159 LANTSAIQDCVTLTRRRVKELQKILNETISDMEVD 55
LA TSAIQDCV LTR+RV+ELQ IL+E + MEVD
Sbjct: 266 LAYTSAIQDCVALTRQRVRELQMILDEASAGMEVD 300
>ref|XP_003531860.1| PREDICTED: exosome complex component RRP43-like [Glycine max]
Length = 302
Score = 135 bits (340), Expect = 6e-30
Identities = 68/95 (71%), Positives = 81/95 (85%)
Frame = -3
Query: 339 KDKRKLKLNNIPFSLTCILHKDYILADPTSEEESIMETYLTVVLDSSFQLVSFNKPGGPG 160
K+KRKL L +IPFSLTCILHK+YILADPT+EEESIMET++TVVLD+S QL+S KPGGP
Sbjct: 208 KEKRKLTLRSIPFSLTCILHKNYILADPTAEEESIMETHVTVVLDTSGQLISLYKPGGPV 267
Query: 159 LANTSAIQDCVTLTRRRVKELQKILNETISDMEVD 55
LA TSAIQDC LTR+RVKEL+ L++ S MEV+
Sbjct: 268 LAYTSAIQDCAALTRQRVKELKSFLDKANSAMEVE 302
>ref|XP_002322717.1| 3' exoribonuclease domain 1-containing family protein [Populus
trichocarpa] gi|222867347|gb|EEF04478.1| 3'
exoribonuclease domain 1-containing family protein
[Populus trichocarpa]
Length = 439
Score = 134 bits (338), Expect = 1e-29
Identities = 68/90 (75%), Positives = 80/90 (88%)
Frame = -3
Query: 339 KDKRKLKLNNIPFSLTCILHKDYILADPTSEEESIMETYLTVVLDSSFQLVSFNKPGGPG 160
K+KRKL L++IPFSLTCILHK+YILADPT+EEESIMET +TVVLDSS +LVSF KPGG
Sbjct: 229 KEKRKLTLSSIPFSLTCILHKNYILADPTAEEESIMETLVTVVLDSSARLVSFYKPGGSV 288
Query: 159 LANTSAIQDCVTLTRRRVKELQKILNETIS 70
A TSA++DCV LTR+RVKELQ+IL+E IS
Sbjct: 289 FAYTSAVKDCVALTRQRVKELQEILDEAIS 318