BLASTX nr result
ID: Rehmannia23_contig00023892
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00023892
(302 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002311445.2| hypothetical protein POPTR_0008s11650g [Popu... 108 1e-21
ref|XP_006573257.1| PREDICTED: mediator of RNA polymerase II tra... 106 4e-21
ref|XP_006573255.1| PREDICTED: mediator of RNA polymerase II tra... 106 4e-21
ref|XP_006574879.1| PREDICTED: mediator of RNA polymerase II tra... 105 6e-21
gb|EOY02123.1| Phytochrome and flowering time regulatory protein... 105 8e-21
gb|ESW25347.1| hypothetical protein PHAVU_003G028300g [Phaseolus... 103 3e-20
ref|XP_006354095.1| PREDICTED: mediator of RNA polymerase II tra... 102 7e-20
gb|EOY02124.1| Phytochrome and flowering time regulatory protein... 100 2e-19
ref|XP_002315956.1| PHYTOCHROME AND FLOWERING TIME 1 family prot... 99 4e-19
ref|XP_004513304.1| PREDICTED: mediator of RNA polymerase II tra... 99 6e-19
ref|XP_004513303.1| PREDICTED: mediator of RNA polymerase II tra... 99 6e-19
ref|XP_004252687.1| PREDICTED: mediator of RNA polymerase II tra... 99 8e-19
ref|XP_004297135.1| PREDICTED: mediator of RNA polymerase II tra... 97 3e-18
ref|XP_002529152.1| conserved hypothetical protein [Ricinus comm... 96 5e-18
ref|XP_006484420.1| PREDICTED: mediator of RNA polymerase II tra... 95 8e-18
ref|XP_006437725.1| hypothetical protein CICLE_v10030710mg [Citr... 95 8e-18
gb|AGM20684.1| PFT [Populus tomentosa] 92 5e-17
emb|CBI27055.3| unnamed protein product [Vitis vinifera] 92 9e-17
ref|XP_002278845.1| PREDICTED: uncharacterized protein LOC100259... 92 9e-17
ref|XP_004166861.1| PREDICTED: mediator of RNA polymerase II tra... 88 1e-15
>ref|XP_002311445.2| hypothetical protein POPTR_0008s11650g [Populus trichocarpa]
gi|550332870|gb|EEE88812.2| hypothetical protein
POPTR_0008s11650g [Populus trichocarpa]
Length = 896
Score = 108 bits (269), Expect = 1e-21
Identities = 57/100 (57%), Positives = 67/100 (67%), Gaps = 1/100 (1%)
Frame = -3
Query: 300 KNPHFLVLISEKFIEAHSSLSRSGVTSLPSNQNPVKVDVTXXXXXXXXXXXXXXXANGSV 121
KNPHFLVLISE F+EA ++LSR G TSLPSNQ PVKVD+ NGS+
Sbjct: 216 KNPHFLVLISENFMEARAALSRPGATSLPSNQTPVKVDIASVTSVTGPLPASIPSVNGSI 275
Query: 120 LVRQPISVGNIHPATVKPEPTALASV-TGPAFPHISSVPR 4
R PISVGN+ ATVK EP+ + S+ G AFPHI+SVPR
Sbjct: 276 TNRPPISVGNLPTATVKVEPSTITSMANGSAFPHITSVPR 315
>ref|XP_006573257.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like isoform X3 [Glycine max]
Length = 725
Score = 106 bits (264), Expect = 4e-21
Identities = 59/101 (58%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Frame = -3
Query: 300 KNPHFLVLISEKFIEAHSSLSRSGVTSLPSNQNPVKVDVTXXXXXXXXXXXXXXXANGSV 121
K PHFL+LISE F EA +LSRSG+TSLPSNQ+PVKVD NGS+
Sbjct: 108 KTPHFLILISEGFREAWGALSRSGITSLPSNQSPVKVDAV-SVTPVTEAPPTSMPVNGSI 166
Query: 120 LVRQPISVGNIHPATVKPEPTALAS-VTGPAFPHISSVPRA 1
RQP+ GN+ PATVK EP +AS V+GPAFPH SSVPRA
Sbjct: 167 PNRQPVPAGNVAPATVKVEPVLVASMVSGPAFPHNSSVPRA 207
>ref|XP_006573255.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like isoform X1 [Glycine max]
gi|571434654|ref|XP_006573256.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 25-like isoform
X2 [Glycine max]
Length = 832
Score = 106 bits (264), Expect = 4e-21
Identities = 59/101 (58%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Frame = -3
Query: 300 KNPHFLVLISEKFIEAHSSLSRSGVTSLPSNQNPVKVDVTXXXXXXXXXXXXXXXANGSV 121
K PHFL+LISE F EA +LSRSG+TSLPSNQ+PVKVD NGS+
Sbjct: 215 KTPHFLILISEGFREAWGALSRSGITSLPSNQSPVKVDAV-SVTPVTEAPPTSMPVNGSI 273
Query: 120 LVRQPISVGNIHPATVKPEPTALAS-VTGPAFPHISSVPRA 1
RQP+ GN+ PATVK EP +AS V+GPAFPH SSVPRA
Sbjct: 274 PNRQPVPAGNVAPATVKVEPVLVASMVSGPAFPHNSSVPRA 314
>ref|XP_006574879.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like [Glycine max]
Length = 877
Score = 105 bits (262), Expect = 6e-21
Identities = 58/101 (57%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Frame = -3
Query: 300 KNPHFLVLISEKFIEAHSSLSRSGVTSLPSNQNPVKVDVTXXXXXXXXXXXXXXXANGSV 121
K PHFL+LISE F EA +LSRSG+TSLPSNQ+PVKVD NGS+
Sbjct: 215 KTPHFLILISEGFREARGALSRSGITSLPSNQSPVKVDAV-SVTPVTGAPPTSMPVNGSI 273
Query: 120 LVRQPISVGNIHPATVKPEPTALAS-VTGPAFPHISSVPRA 1
RQP+ GN+ PATVK EP + S V+GPAFPH SSVPRA
Sbjct: 274 PNRQPVPAGNVAPATVKVEPVPVTSMVSGPAFPHNSSVPRA 314
>gb|EOY02123.1| Phytochrome and flowering time regulatory protein isoform 1
[Theobroma cacao]
Length = 871
Score = 105 bits (261), Expect = 8e-21
Identities = 54/101 (53%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Frame = -3
Query: 300 KNPHFLVLISEKFIEAHSSLSRSGVTSLPSNQNPVKVDVTXXXXXXXXXXXXXXXANGSV 121
+NP FLVLISE F+E ++LSR GV SL SNQ+PVK+D+ NGS+
Sbjct: 216 RNPPFLVLISENFMEGRAALSRPGVPSLASNQSPVKMDMASVTSGTGPPPTSVPSVNGSM 275
Query: 120 LVRQPISVGNIHPATVKPEPTALASV-TGPAFPHISSVPRA 1
+ RQP+SVGN+ AT+K EPT + S+ TGPAFPHI +VPRA
Sbjct: 276 MSRQPVSVGNVPTATIKVEPTTITSMGTGPAFPHIPAVPRA 316
>gb|ESW25347.1| hypothetical protein PHAVU_003G028300g [Phaseolus vulgaris]
Length = 863
Score = 103 bits (256), Expect = 3e-20
Identities = 57/102 (55%), Positives = 66/102 (64%), Gaps = 2/102 (1%)
Frame = -3
Query: 300 KNPHFLVLISEKFIEAHSSLSRSGVTSLPSNQNPVKVDVTXXXXXXXXXXXXXXXANGSV 121
K PHFL+LISE F EA S+LSRSG+TSLPSNQ+PVKVD NGS+
Sbjct: 215 KTPHFLILISESFREARSALSRSGITSLPSNQSPVKVDAVSVTPVTGAPPTSMPSVNGSI 274
Query: 120 LVRQPISVGNI-HPATVKPEPTALAS-VTGPAFPHISSVPRA 1
RQP+ GN+ PATVK E + S V+GP FPH SSVPRA
Sbjct: 275 ANRQPVPAGNVAPPATVKVEQVPVTSMVSGPPFPHNSSVPRA 316
>ref|XP_006354095.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like [Solanum tuberosum]
Length = 819
Score = 102 bits (253), Expect = 7e-20
Identities = 55/97 (56%), Positives = 66/97 (68%)
Frame = -3
Query: 300 KNPHFLVLISEKFIEAHSSLSRSGVTSLPSNQNPVKVDVTXXXXXXXXXXXXXXXANGSV 121
KNP+FLVLISE FIEA ++ SRSG+T+L SN +PVK+DV+ AN SV
Sbjct: 214 KNPNFLVLISENFIEARAAFSRSGMTNLASNHSPVKMDVSSVLPVSGTQSISNSAANVSV 273
Query: 120 LVRQPISVGNIHPATVKPEPTALASVTGPAFPHISSV 10
+ R PIS GNI PATVK EP + S+TGPAF HI SV
Sbjct: 274 MSRPPISAGNIPPATVKIEPNTVTSMTGPAFSHIPSV 310
>gb|EOY02124.1| Phytochrome and flowering time regulatory protein isoform 2
[Theobroma cacao]
Length = 860
Score = 100 bits (250), Expect = 2e-19
Identities = 54/101 (53%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Frame = -3
Query: 300 KNPHFLVLISEKFIEAHSSLSRSGVTSLPSNQNPVKVDVTXXXXXXXXXXXXXXXANGSV 121
+NP FLVLISE F+E ++LSR GV SL SNQ+PVK+D+ NGS+
Sbjct: 216 RNPPFLVLISENFMEGRAALSRPGVPSLASNQSPVKMDMA-----------SVTSVNGSM 264
Query: 120 LVRQPISVGNIHPATVKPEPTALASV-TGPAFPHISSVPRA 1
+ RQP+SVGN+ AT+K EPT + S+ TGPAFPHI +VPRA
Sbjct: 265 MSRQPVSVGNVPTATIKVEPTTITSMGTGPAFPHIPAVPRA 305
>ref|XP_002315956.1| PHYTOCHROME AND FLOWERING TIME 1 family protein [Populus
trichocarpa] gi|222864996|gb|EEF02127.1| PHYTOCHROME AND
FLOWERING TIME 1 family protein [Populus trichocarpa]
Length = 796
Score = 99.4 bits (246), Expect = 4e-19
Identities = 54/100 (54%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
Frame = -3
Query: 300 KNPHFLVLISEKFIEAHSSLSRSGVTSLPSNQNPVKVDVTXXXXXXXXXXXXXXXANGSV 121
KNPHFLVLISE F+EA ++LS GVTSL SNQ PVKVD+ NGS+
Sbjct: 207 KNPHFLVLISENFMEARAALSLPGVTSLTSNQTPVKVDIASVTSVTGPAPTSIPSVNGSI 266
Query: 120 LVRQPISVGNIHPATVKPEPTALASV-TGPAFPHISSVPR 4
R ISVGN+ ATVK EP+ + S+ GP FPH SVPR
Sbjct: 267 TNRPTISVGNVPTATVKVEPSTITSMANGPTFPHNPSVPR 306
>ref|XP_004513304.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like isoform X2 [Cicer arietinum]
Length = 751
Score = 99.0 bits (245), Expect = 6e-19
Identities = 53/101 (52%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Frame = -3
Query: 300 KNPHFLVLISEKFIEAHSSLSRSGVTSLPSNQNPVKVDVTXXXXXXXXXXXXXXXANGSV 121
K HFL+LISE F EA +LSRSG+T+LPSNQ+PVKVD NG++
Sbjct: 215 KTSHFLILISEGFREARGALSRSGITNLPSNQSPVKVDTVSVTPVTGGPPTSLPSVNGTI 274
Query: 120 LVRQPISVGNIHPATVKPEPTALAS-VTGPAFPHISSVPRA 1
RQPI GN+ PATVK E + S +TGPAFPH SS RA
Sbjct: 275 ANRQPIPAGNVTPATVKVEQVPVTSMITGPAFPHNSSAARA 315
>ref|XP_004513303.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like isoform X1 [Cicer arietinum]
Length = 818
Score = 99.0 bits (245), Expect = 6e-19
Identities = 53/101 (52%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Frame = -3
Query: 300 KNPHFLVLISEKFIEAHSSLSRSGVTSLPSNQNPVKVDVTXXXXXXXXXXXXXXXANGSV 121
K HFL+LISE F EA +LSRSG+T+LPSNQ+PVKVD NG++
Sbjct: 215 KTSHFLILISEGFREARGALSRSGITNLPSNQSPVKVDTVSVTPVTGGPPTSLPSVNGTI 274
Query: 120 LVRQPISVGNIHPATVKPEPTALAS-VTGPAFPHISSVPRA 1
RQPI GN+ PATVK E + S +TGPAFPH SS RA
Sbjct: 275 ANRQPIPAGNVTPATVKVEQVPVTSMITGPAFPHNSSAARA 315
>ref|XP_004252687.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like [Solanum lycopersicum]
Length = 805
Score = 98.6 bits (244), Expect = 8e-19
Identities = 53/97 (54%), Positives = 64/97 (65%)
Frame = -3
Query: 300 KNPHFLVLISEKFIEAHSSLSRSGVTSLPSNQNPVKVDVTXXXXXXXXXXXXXXXANGSV 121
KNP+FLVLISE FIEA ++ SRSG+T+L SN +PVK+DV+ AN SV
Sbjct: 214 KNPNFLVLISENFIEARAAFSRSGLTNLASNHSPVKMDVSSVLPVSGTQSISNSAANVSV 273
Query: 120 LVRQPISVGNIHPATVKPEPTALASVTGPAFPHISSV 10
+ R PIS GNI PATVK EP + +TGP F HI SV
Sbjct: 274 ISRPPISAGNIPPATVKIEPNTVTPMTGPGFSHIPSV 310
>ref|XP_004297135.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like [Fragaria vesca subsp. vesca]
Length = 855
Score = 96.7 bits (239), Expect = 3e-18
Identities = 52/98 (53%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Frame = -3
Query: 300 KNPHFLVLISEKFIEAHSSLSRSGVTSLPSNQNPVKVDVTXXXXXXXXXXXXXXXANGSV 121
KNPHFLVLISE FIEA ++LSR G T+LPS +PVK+D+ NGSV
Sbjct: 216 KNPHFLVLISENFIEARATLSRPGSTTLPSIPSPVKMDIAPVASVTGPPPTSMPSVNGSV 275
Query: 120 LVRQPISVGNIHPATVKPEPTALAS-VTGPAFPHISSV 10
+ R SVGN+ PATVK EP+ ++S V GPAF H+ SV
Sbjct: 276 MNRPSFSVGNVPPATVKVEPSTVSSMVAGPAFAHVPSV 313
>ref|XP_002529152.1| conserved hypothetical protein [Ricinus communis]
gi|223531431|gb|EEF33265.1| conserved hypothetical
protein [Ricinus communis]
Length = 561
Score = 95.9 bits (237), Expect = 5e-18
Identities = 52/97 (53%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Frame = -3
Query: 300 KNPHFLVLISEKFIEAHSSLSRSGVTSLPSNQNPVKVDVTXXXXXXXXXXXXXXXANGSV 121
KNPHFLVLISE F+EA ++LSR GV +LPSNQ+PVK+DV NGS+
Sbjct: 176 KNPHFLVLISENFMEARAALSRPGVANLPSNQSPVKMDVASVTSVAGPTSPSIPSVNGSI 235
Query: 120 LVRQPISVGNIHPATVKPEPTALASVT-GPAFPHISS 13
+ R S+GN+ ATVK EPT + S+ GPAFPHI S
Sbjct: 236 MSRP--SIGNVPTATVKVEPTTVTSMAPGPAFPHIPS 270
>ref|XP_006484420.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like isoform X2 [Citrus sinensis]
Length = 829
Score = 95.1 bits (235), Expect = 8e-18
Identities = 53/100 (53%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
Frame = -3
Query: 300 KNPHFLVLISEKFIEAHSSLSRSGVTSLPSNQNPVKVDVTXXXXXXXXXXXXXXXANGSV 121
KNPHFLVLISE F+EA ++LSR GV +L NQNPVK+D+ NG
Sbjct: 215 KNPHFLVLISENFMEARAALSRPGVANLAPNQNPVKMDIAPVTSVTGPAPTSIPSVNG-- 272
Query: 120 LVRQPISVGNIHPATVKPEPTALAS-VTGPAFPHISSVPR 4
+ R PISVGN+ ATVK EP+ + S V GP FPHI SV R
Sbjct: 273 INRPPISVGNVPTATVKVEPSTVTSMVNGPTFPHIPSVSR 312
>ref|XP_006437725.1| hypothetical protein CICLE_v10030710mg [Citrus clementina]
gi|568861864|ref|XP_006484419.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 25-like isoform
X1 [Citrus sinensis] gi|557539921|gb|ESR50965.1|
hypothetical protein CICLE_v10030710mg [Citrus
clementina]
Length = 830
Score = 95.1 bits (235), Expect = 8e-18
Identities = 53/100 (53%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
Frame = -3
Query: 300 KNPHFLVLISEKFIEAHSSLSRSGVTSLPSNQNPVKVDVTXXXXXXXXXXXXXXXANGSV 121
KNPHFLVLISE F+EA ++LSR GV +L NQNPVK+D+ NG
Sbjct: 216 KNPHFLVLISENFMEARAALSRPGVANLAPNQNPVKMDIAPVTSVTGPAPTSIPSVNG-- 273
Query: 120 LVRQPISVGNIHPATVKPEPTALAS-VTGPAFPHISSVPR 4
+ R PISVGN+ ATVK EP+ + S V GP FPHI SV R
Sbjct: 274 INRPPISVGNVPTATVKVEPSTVTSMVNGPTFPHIPSVSR 313
>gb|AGM20684.1| PFT [Populus tomentosa]
Length = 889
Score = 92.4 bits (228), Expect = 5e-17
Identities = 54/108 (50%), Positives = 63/108 (58%), Gaps = 9/108 (8%)
Frame = -3
Query: 300 KNPHFLVLISEKFIEAHSSLSRSGVTSLPSNQNPVKVDVT--------XXXXXXXXXXXX 145
KNPHFLVLISE F+EA ++LS GVTSL SNQ PVKVD+
Sbjct: 238 KNPHFLVLISENFLEARAALSLPGVTSLTSNQTPVKVDIASVTSVTGPAPTSIPSDLLSF 297
Query: 144 XXXANGSVLVRQPISVGNIHPATVKPEPTALASV-TGPAFPHISSVPR 4
NGS+ R ISVGN+ ATVK EP+ + S+ GP FPH SVPR
Sbjct: 298 KTSVNGSITNRPTISVGNVPTATVKVEPSTITSMANGPTFPHNPSVPR 345
>emb|CBI27055.3| unnamed protein product [Vitis vinifera]
Length = 815
Score = 91.7 bits (226), Expect = 9e-17
Identities = 48/101 (47%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Frame = -3
Query: 300 KNPHFLVLISEKFIEAHSSLSRSGVTSLPSNQNPVKVDVTXXXXXXXXXXXXXXXANGSV 121
KNPHFLVLIS+ F+EA ++LSR G++++ +NQ+PVK+D+ NG +
Sbjct: 216 KNPHFLVLISDSFMEARAALSRPGLSNMTANQSPVKMDIASVPQVSAAPPASIPSVNG-I 274
Query: 120 LVRQPISVGNIHPATVKPEPTALASVT-GPAFPHISSVPRA 1
+ R I+VG + ATVK EP+ + S+T GP FPHI SVPRA
Sbjct: 275 MNRPTIAVGAVPTATVKVEPSTVTSITSGPGFPHIPSVPRA 315
>ref|XP_002278845.1| PREDICTED: uncharacterized protein LOC100259509 [Vitis vinifera]
Length = 827
Score = 91.7 bits (226), Expect = 9e-17
Identities = 48/101 (47%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Frame = -3
Query: 300 KNPHFLVLISEKFIEAHSSLSRSGVTSLPSNQNPVKVDVTXXXXXXXXXXXXXXXANGSV 121
KNPHFLVLIS+ F+EA ++LSR G++++ +NQ+PVK+D+ NG +
Sbjct: 216 KNPHFLVLISDSFMEARAALSRPGLSNMTANQSPVKMDIASVPQVSAAPPASIPSVNG-I 274
Query: 120 LVRQPISVGNIHPATVKPEPTALASVT-GPAFPHISSVPRA 1
+ R I+VG + ATVK EP+ + S+T GP FPHI SVPRA
Sbjct: 275 MNRPTIAVGAVPTATVKVEPSTVTSITSGPGFPHIPSVPRA 315
>ref|XP_004166861.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like, partial [Cucumis sativus]
Length = 595
Score = 87.8 bits (216), Expect = 1e-15
Identities = 48/102 (47%), Positives = 66/102 (64%), Gaps = 2/102 (1%)
Frame = -3
Query: 300 KNPHFLVLISEKFIEAHSSLSRSGVTSLPSNQNPVKVDVTXXXXXXXXXXXXXXXANGSV 121
K+P +LVLISE F+EA ++LSR G+TSLP+NQ+PVK+D++ NG +
Sbjct: 214 KSPSYLVLISENFVEARAALSRPGITSLPANQSPVKMDISSVVPVTGPPPTTTPSVNGPI 273
Query: 120 LVRQPISVGNIHPATVKPEPTALASVT-GPAF-PHISSVPRA 1
+ RQP+SV N ATVK EP + S+T G + PH+ SV RA
Sbjct: 274 INRQPVSVPNGPTATVKVEPNTVTSMTNGSGYPPHMPSVVRA 315