BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00023827
         (464 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006347856.1| PREDICTED: pentatricopeptide repeat-containi...   228   5e-58
ref|XP_004231236.1| PREDICTED: pentatricopeptide repeat-containi...   227   1e-57
gb|EPS60295.1| hypothetical protein M569_14504, partial [Genlise...   219   3e-55
ref|XP_002321443.2| hypothetical protein POPTR_0015s02060g [Popu...   215   4e-54
ref|XP_006422178.1| hypothetical protein CICLE_v10006927mg [Citr...   208   5e-52
gb|EOY23498.1| Tetratricopeptide repeat-like superfamily protein...   204   8e-51
ref|XP_003634143.1| PREDICTED: pentatricopeptide repeat-containi...   203   2e-50
ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containi...   202   3e-50
emb|CBI23556.3| unnamed protein product [Vitis vinifera]              202   3e-50
ref|XP_006290593.1| hypothetical protein CARUB_v10016682mg [Caps...   194   1e-47
ref|XP_006404168.1| hypothetical protein EUTSA_v10010119mg [Eutr...   194   1e-47
ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   192   3e-47
ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containi...   192   4e-47
ref|NP_190486.2| pentatricopeptide repeat-containing protein [Ar...   189   3e-46
emb|CAB66396.1| putative protein [Arabidopsis thaliana]               189   3e-46
gb|EMJ18239.1| hypothetical protein PRUPE_ppa001611mg [Prunus pe...   186   2e-45
ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arab...   186   3e-45
gb|EXC74714.1| hypothetical protein L484_000366 [Morus notabilis]     184   8e-45
gb|EXC31503.1| hypothetical protein L484_001299 [Morus notabilis]     184   8e-45
ref|XP_002522011.1| pentatricopeptide repeat-containing protein,...   181   1e-43

>ref|XP_006347856.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Solanum tuberosum]
          Length = 849

 Score =  228 bits (582), Expect = 5e-58
 Identities = 107/153 (69%), Positives = 127/153 (83%)
 Frame = -3

Query: 459 AEEIFSSMEKTRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRACS 280
           AE+IF SM + RDLVSWSAMISCYAH G+ LE+V  FF+MVEFGE PN+FCFSA I+AC 
Sbjct: 121 AEKIFESMGEKRDLVSWSAMISCYAHCGMELESVFTFFDMVEFGEYPNQFCFSAVIQACC 180

Query: 279 NREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVSW 100
           + E G +GL IFGF++KTGYFESD+CVGCALIDLF KGF DL  A KVFD MP +N V+W
Sbjct: 181 SAELGWVGLAIFGFVIKTGYFESDICVGCALIDLFAKGFSDLRSAKKVFDRMPERNLVTW 240

Query: 99  TLMITRFTQMGSPRDAILLFLDMVIAGFVPDRF 1
           TLMITRF+Q+G+ +DA+ LFL+MV  GFVPDRF
Sbjct: 241 TLMITRFSQLGASKDAVRLFLEMVSEGFVPDRF 273



 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 55/156 (35%), Positives = 91/156 (58%), Gaps = 3/156 (1%)
 Frame = -3

Query: 459 AEEIFSSMEKTRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRACS 280
           A+++F  M + R+LV+W+ MI+ ++  G + +AV +F EMV  G  P+ F FS  + AC+
Sbjct: 225 AKKVFDRMPE-RNLVTWTLMITRFSQLGASKDAVRLFLEMVSEGFVPDRFTFSGVLSACA 283

Query: 279 NREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGF--GDLELALKVFDEMPVKNSV 106
                 +G  + G ++K+    +DVCVGC+L+D++ K    G ++ + KVFD M   N +
Sbjct: 284 EPGLSLLGRQLHGGVIKS-RLSADVCVGCSLVDMYAKSTMDGSMDDSRKVFDRMADHNVM 342

Query: 105 SWTLMITRFTQMGS-PRDAILLFLDMVIAGFVPDRF 1
           SWT +IT + Q G    +AI L+  M+     P+ F
Sbjct: 343 SWTAIITGYVQSGHYDMEAIKLYCRMIDNPVKPNHF 378



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 42/141 (29%), Positives = 79/141 (56%), Gaps = 1/141 (0%)
 Frame = -3

Query: 459 AEEIFSSMEKTRDLVSWSAMISCYAHNG-LNLEAVLMFFEMVEFGERPNEFCFSAAIRAC 283
           + ++F  M    +++SW+A+I+ Y  +G  ++EA+ ++  M++   +PN F FS+ ++AC
Sbjct: 329 SRKVFDRMAD-HNVMSWTAIITGYVQSGHYDMEAIKLYCRMIDNPVKPNHFTFSSLLKAC 387

Query: 282 SNREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVS 103
            N     IG  I+   +K G   S  CV  +LI ++ K  G +E A K F+ +  KN VS
Sbjct: 388 GNLSNPAIGEQIYNHAVKLG-LASVNCVANSLISMYAKS-GRMEEARKAFELLFEKNLVS 445

Query: 102 WTLMITRFTQMGSPRDAILLF 40
           + +++  +++     +A  LF
Sbjct: 446 YNIIVDGYSKSLDSAEAFELF 466


>ref|XP_004231236.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Solanum lycopersicum]
          Length = 844

 Score =  227 bits (578), Expect = 1e-57
 Identities = 107/153 (69%), Positives = 126/153 (82%)
 Frame = -3

Query: 459 AEEIFSSMEKTRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRACS 280
           AE+IF SM + RDLVSWSAMISCYAH G+ LE+V  F++MVEFGE PN+FCFSA I+AC 
Sbjct: 116 AEKIFESMGEKRDLVSWSAMISCYAHCGMELESVFTFYDMVEFGEYPNQFCFSAVIQACC 175

Query: 279 NREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVSW 100
           + E G +GL IFGF +KTGYFESDVCVGCALIDLF KGF DL  A KVFD MP +N V+W
Sbjct: 176 SAELGWVGLAIFGFAIKTGYFESDVCVGCALIDLFAKGFSDLRSAKKVFDRMPERNLVTW 235

Query: 99  TLMITRFTQMGSPRDAILLFLDMVIAGFVPDRF 1
           TLMITRF+Q+G+ +DA+ LFL+MV  GFVPDRF
Sbjct: 236 TLMITRFSQLGASKDAVRLFLEMVSEGFVPDRF 268



 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 55/156 (35%), Positives = 91/156 (58%), Gaps = 3/156 (1%)
 Frame = -3

Query: 459 AEEIFSSMEKTRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRACS 280
           A+++F  M + R+LV+W+ MI+ ++  G + +AV +F EMV  G  P+ F FS  + AC+
Sbjct: 220 AKKVFDRMPE-RNLVTWTLMITRFSQLGASKDAVRLFLEMVSEGFVPDRFTFSGVLSACA 278

Query: 279 NREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGF--GDLELALKVFDEMPVKNSV 106
                 +G  + G ++K+    +DVCVGC+L+D++ K    G ++ + KVFD M   N +
Sbjct: 279 EPGLSALGRQLHGGVIKS-RLSADVCVGCSLVDMYAKSTMDGSMDDSRKVFDRMADHNVM 337

Query: 105 SWTLMITRFTQMGS-PRDAILLFLDMVIAGFVPDRF 1
           SWT +IT + Q G    +AI L+  M+     P+ F
Sbjct: 338 SWTAIITGYVQRGHYDMEAIKLYCRMIDGLVKPNHF 373



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 41/141 (29%), Positives = 76/141 (53%), Gaps = 1/141 (0%)
 Frame = -3

Query: 459 AEEIFSSMEKTRDLVSWSAMISCYAHNG-LNLEAVLMFFEMVEFGERPNEFCFSAAIRAC 283
           + ++F  M    +++SW+A+I+ Y   G  ++EA+ ++  M++   +PN F FS+ ++AC
Sbjct: 324 SRKVFDRMAD-HNVMSWTAIITGYVQRGHYDMEAIKLYCRMIDGLVKPNHFTFSSLLKAC 382

Query: 282 SNREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVS 103
            N     IG  I+   +K G   S  CV  +LI ++ K  G +E A K F+ +  KN  S
Sbjct: 383 GNLSNPAIGEQIYNHAVKLG-LASVNCVANSLISMYAKS-GRMEEARKAFELLFEKNLAS 440

Query: 102 WTLMITRFTQMGSPRDAILLF 40
           + +++   ++     +A  LF
Sbjct: 441 YNIIVDGCSKSLDSAEAFELF 461


>gb|EPS60295.1| hypothetical protein M569_14504, partial [Genlisea aurea]
          Length = 819

 Score =  219 bits (558), Expect = 3e-55
 Identities = 105/154 (68%), Positives = 124/154 (80%)
 Frame = -3

Query: 462 KAEEIFSSMEKTRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRAC 283
           KA+EIF SM + +DLVSWSAM+SCY+ NGLN  A+ +F EMV  GE PNE+CFS A+RAC
Sbjct: 82  KADEIFGSMGEMKDLVSWSAMVSCYSLNGLNSRAISLFIEMVISGENPNEYCFSGALRAC 141

Query: 282 SNREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVS 103
            NRE+   GLVIFGFL KTG+F SDV VGCALI+ F KGF DL+ A KVFDEMP KNSV+
Sbjct: 142 WNREFAATGLVIFGFLTKTGHFHSDVSVGCALIETFAKGFADLDSAKKVFDEMPDKNSVT 201

Query: 102 WTLMITRFTQMGSPRDAILLFLDMVIAGFVPDRF 1
           WTL+ITRF Q+G P +AI LFLDMVIAGF PD++
Sbjct: 202 WTLIITRFAQLGCPEEAIELFLDMVIAGFQPDQY 235



 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 55/157 (35%), Positives = 92/157 (58%), Gaps = 4/157 (2%)
 Frame = -3

Query: 459 AEEIFSSMEKTRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRACS 280
           A+++F  M   ++ V+W+ +I+ +A  G   EA+ +F +MV  G +P+++ FS+ + AC+
Sbjct: 187 AKKVFDEMPD-KNSVTWTLIITRFAQLGCPEEAIELFLDMVIAGFQPDQYTFSSCLSACA 245

Query: 279 NREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGF--GDLELALKVFDEMPVKNSV 106
                 +G  +  + +K G   SDVCVGC+L+D++VK    G +  + KVFD M   N +
Sbjct: 246 ELGSAAVGRQLHSWAIKNGSI-SDVCVGCSLVDMYVKSCLNGSVAESRKVFDAMLEHNVM 304

Query: 105 SWTLMITRFTQMGS-PRDAILLFLDMVIAGFV-PDRF 1
           SWT +IT   Q G  P +A+ L+  M+  G V P+ F
Sbjct: 305 SWTAIITGCAQNGGLPDEALRLYCRMMTEGTVKPNHF 341



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 49/142 (34%), Positives = 78/142 (54%), Gaps = 2/142 (1%)
 Frame = -3

Query: 426 RDLVSWSAMISCYAHNGLNLEA--VLMFFEMVEFGERPNEFCFSAAIRACSNREYGRIGL 253
           ++LVS++A+I  Y+ +  + EA  +L   E  EFG   + F F++ +   ++      G 
Sbjct: 404 KNLVSYNALIDGYSKSTDSHEAFDLLNRVETSEFGI--DAFTFASLLSGAASIGAVGKGE 461

Query: 252 VIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVSWTLMITRFTQ 73
            + G L+K+G FESD+CV  ALI ++ +  GDL    K+FD +  +N VSWT +IT   +
Sbjct: 462 QLHGRLLKSG-FESDLCVSNALISMYTR-CGDLRSGFKIFDGIENRNIVSWTSIITGCAK 519

Query: 72  MGSPRDAILLFLDMVIAGFVPD 7
            G    A+ LF  M   G  P+
Sbjct: 520 HGFAETALELFHRMTETGIRPN 541



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 45/156 (28%), Positives = 87/156 (55%), Gaps = 2/156 (1%)
 Frame = -3

Query: 462 KAEEIFSSMEKTRDLVSWSAMIS-CYAHNGLNLEAVLMFFEMVEFGE-RPNEFCFSAAIR 289
           ++ ++F +M +  +++SW+A+I+ C  + GL  EA+ ++  M+  G  +PN F FSA ++
Sbjct: 290 ESRKVFDAMLE-HNVMSWTAIITGCAQNGGLPDEALRLYCRMMTEGTVKPNHFTFSAVLK 348

Query: 288 ACSNREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNS 109
           AC +    R+G  I+G  +K G F +  CVG +LI ++ +    ++ A + F+ +  KN 
Sbjct: 349 ACGDLFNPRLGEAIYGQSVKLG-FATVNCVGNSLISMYTRN-DRMDEARRAFEFLVHKNL 406

Query: 108 VSWTLMITRFTQMGSPRDAILLFLDMVIAGFVPDRF 1
           VS+  +I  +++     +A  L   +  + F  D F
Sbjct: 407 VSYNALIDGYSKSTDSHEAFDLLNRVETSEFGIDAF 442


>ref|XP_002321443.2| hypothetical protein POPTR_0015s02060g [Populus trichocarpa]
           gi|550321785|gb|EEF05570.2| hypothetical protein
           POPTR_0015s02060g [Populus trichocarpa]
          Length = 931

 Score =  215 bits (548), Expect = 4e-54
 Identities = 103/154 (66%), Positives = 123/154 (79%)
 Frame = -3

Query: 462 KAEEIFSSMEKTRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRAC 283
           +A EIF SM   RDLVSWSA+ISCYA+N    EA+  FF+M+E G  PNE+CF+   RAC
Sbjct: 201 QAHEIFESMGNKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRAC 260

Query: 282 SNREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVS 103
           SN+E   +G +IFGFL+KTGYFESDVCVGCALID+FVKG GDLE A KVFD MP +N V+
Sbjct: 261 SNKENISLGKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVT 320

Query: 102 WTLMITRFTQMGSPRDAILLFLDMVIAGFVPDRF 1
           WTLMITRF Q+G  RDA+ LFLDMV++G+VPDRF
Sbjct: 321 WTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRF 354



 Score =  101 bits (251), Expect = 1e-19
 Identities = 60/156 (38%), Positives = 91/156 (58%), Gaps = 3/156 (1%)
 Frame = -3

Query: 459 AEEIFSSMEKTRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRACS 280
           A ++F  M   R++V+W+ MI+ +   G + +AV +F +MV  G  P+ F  S  + AC+
Sbjct: 306 AYKVFDRMPD-RNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACA 364

Query: 279 NREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVK--GFGDLELALKVFDEMPVKNSV 106
                 +G      +MK+G  + DVCVGC+L+D++ K    G ++ A KVFD MPV N +
Sbjct: 365 EMGLLSLGRQFHCLVMKSG-LDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVM 423

Query: 105 SWTLMITRFTQMGS-PRDAILLFLDMVIAGFVPDRF 1
           SWT +IT + Q G   R+AI LFL+MV     P+ F
Sbjct: 424 SWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHF 459



 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 46/148 (31%), Positives = 85/148 (57%), Gaps = 1/148 (0%)
 Frame = -3

Query: 459 AEEIFSSMEKTRDLVSWSAMISCYAHNG-LNLEAVLMFFEMVEFGERPNEFCFSAAIRAC 283
           A ++F  M    +++SW+A+I+ Y  +G  + EA+ +F EMV+   +PN F FS+ ++AC
Sbjct: 410 ARKVFDRMP-VHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKAC 468

Query: 282 SNREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVS 103
           +N     +G  ++  ++K     S  CVG +LI ++ +  G++E A K FD +  KN VS
Sbjct: 469 ANLSDIWLGEQVYALVVKM-RLASINCVGNSLISMYSR-CGNMENARKAFDVLFEKNLVS 526

Query: 102 WTLMITRFTQMGSPRDAILLFLDMVIAG 19
           +  ++  + +  +  +A  LF ++  AG
Sbjct: 527 YNTIVNAYAKSLNSEEAFELFNEIEGAG 554



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 45/140 (32%), Positives = 79/140 (56%)
 Frame = -3

Query: 426 RDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRACSNREYGRIGLVI 247
           ++LVS++ +++ YA +  + EA  +F E+   G   N F F++ +   S+      G  I
Sbjct: 522 KNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQI 581

Query: 246 FGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVSWTLMITRFTQMG 67
              ++K+G F+S++ +  ALI ++ +  G++E A +VF+EM   N +SWT MIT F + G
Sbjct: 582 HSRILKSG-FKSNLHICNALISMYSR-CGNIEAAFQVFNEMGDGNVISWTSMITGFAKHG 639

Query: 66  SPRDAILLFLDMVIAGFVPD 7
               A+  F  M+ AG  P+
Sbjct: 640 FATRALETFHKMLEAGVSPN 659


>ref|XP_006422178.1| hypothetical protein CICLE_v10006927mg [Citrus clementina]
           gi|568874825|ref|XP_006490514.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Citrus sinensis]
           gi|557524051|gb|ESR35418.1| hypothetical protein
           CICLE_v10006927mg [Citrus clementina]
          Length = 861

 Score =  208 bits (530), Expect = 5e-52
 Identities = 100/154 (64%), Positives = 122/154 (79%)
 Frame = -3

Query: 462 KAEEIFSSMEKTRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRAC 283
           +A +IF SM   RD+VSWS+MIS Y + G  ++A+ MF EM+E G  PNE+CFSA IRAC
Sbjct: 131 EANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRAC 190

Query: 282 SNREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVS 103
           SN E   IG +I+GFL+K GYF+SDVCVGCALID+FVKG  DLE A KVFD+M  KN+V 
Sbjct: 191 SNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVG 250

Query: 102 WTLMITRFTQMGSPRDAILLFLDMVIAGFVPDRF 1
           WTLMITR TQ+G PRDAI LFLDM+++GF+PDRF
Sbjct: 251 WTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRF 284



 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 52/156 (33%), Positives = 85/156 (54%), Gaps = 3/156 (1%)
 Frame = -3

Query: 459 AEEIFSSMEKTRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRACS 280
           A ++F  M + ++ V W+ MI+     G   +A+ +F +M+  G  P+ F  S  + ACS
Sbjct: 236 AYKVFDKMTE-KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294

Query: 279 NREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGF--GDLELALKVFDEMPVKNSV 106
             E    G  +  + ++TG    DVCVGC+L+D++ K    G ++ + KVFD M   N +
Sbjct: 295 ELELFTSGKQLHSWAIRTG-LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353

Query: 105 SWTLMITRFTQMGS-PRDAILLFLDMVIAGFVPDRF 1
           SWT +IT + Q G   ++A+ LF DM+     P+ F
Sbjct: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHF 389



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 46/151 (30%), Positives = 83/151 (54%)
 Frame = -3

Query: 459 AEEIFSSMEKTRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRACS 280
           A + F S+ + ++LVS++ M+  YA N  + +A  +  E+ + G   + + F++ +   S
Sbjct: 442 ARKAFESLFE-KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500

Query: 279 NREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVSW 100
           +      G  I   ++K+G FES+ C+  ALI ++ +   ++E A +VF EM  +N +SW
Sbjct: 501 SIGAIGKGEQIHARIIKSG-FESNHCIYNALISMYSR-CANVEAAFQVFKEMEDRNVISW 558

Query: 99  TLMITRFTQMGSPRDAILLFLDMVIAGFVPD 7
           T MIT F + G    A+ +F  M+  G  P+
Sbjct: 559 TSMITGFAKHGFAARALEIFYKMLADGIKPN 589



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 36/118 (30%), Positives = 67/118 (56%), Gaps = 1/118 (0%)
 Frame = -3

Query: 423 DLVSWSAMISCYAHNG-LNLEAVLMFFEMVEFGERPNEFCFSAAIRACSNREYGRIGLVI 247
           +++SW+A+I+ Y  +G  + EAV +F +M++    PN F F++ ++AC N     +   +
Sbjct: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSSVAEQV 410

Query: 246 FGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVSWTLMITRFTQ 73
           +   +K G    D CVG +LI ++ +  G +E A K F+ +  KN VS+  M+  + +
Sbjct: 411 YTHAVKRGRALDD-CVGNSLISMYARS-GRMEDARKAFESLFEKNLVSYNTMVDAYAK 466


>gb|EOY23498.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
          Length = 860

 Score =  204 bits (520), Expect = 8e-51
 Identities = 98/154 (63%), Positives = 120/154 (77%)
 Frame = -3

Query: 462 KAEEIFSSMEKTRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRAC 283
           +A +IF  ME  RDLVSWSAMISC+A+N +  +A+L F +M+E G  PNE+CF+A +RAC
Sbjct: 128 RAHKIFQRMEDKRDLVSWSAMISCFANNKMEFKAILTFLDMLENGFYPNEYCFTAVVRAC 187

Query: 282 SNREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVS 103
           S  E+  IG +I GFL+K+GY ESD  VGCALID+FVKG  DL  A KVFD+MP KN V+
Sbjct: 188 SKAEFFSIGEIILGFLVKSGYLESDTNVGCALIDMFVKGNSDLASAFKVFDKMPAKNVVA 247

Query: 102 WTLMITRFTQMGSPRDAILLFLDMVIAGFVPDRF 1
           WTLMITR TQ+G PRDAI LFLDMV+ G+VPDRF
Sbjct: 248 WTLMITRCTQLGYPRDAIDLFLDMVLGGYVPDRF 281



 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 51/158 (32%), Positives = 87/158 (55%), Gaps = 5/158 (3%)
 Frame = -3

Query: 459 AEEIFSSMEKTRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRACS 280
           A ++F  M   +++V+W+ MI+     G   +A+ +F +MV  G  P+ F  S  I AC+
Sbjct: 233 AFKVFDKMP-AKNVVAWTLMITRCTQLGYPRDAIDLFLDMVLGGYVPDRFTLSGIISACT 291

Query: 279 NREYGRIGL--VIFGFLMKTGYFESDVCVGCALIDLFVKGF--GDLELALKVFDEMPVKN 112
             E   + L   +  +++++G F  DVC+GC+L+D++ K    G L+ + KVF  M   N
Sbjct: 292 ELESESLSLGKQLHSWVIRSG-FALDVCIGCSLVDMYAKCTVGGSLDDSRKVFGRMEEHN 350

Query: 111 SVSWTLMITRFTQMGS-PRDAILLFLDMVIAGFVPDRF 1
            +SWT +IT + Q G   ++A+ LF  M+     P+ F
Sbjct: 351 VMSWTAIITGYVQCGGRDKEALELFSKMMGGPVQPNHF 388



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 47/151 (31%), Positives = 84/151 (55%)
 Frame = -3

Query: 459 AEEIFSSMEKTRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRACS 280
           A++ F S+ + ++LVS++ ++   A N  +  A  +F E+ +     N F F++ +   S
Sbjct: 441 AQKAFESLFE-KNLVSYNTIVDACAKNLDSEGAFELFHELTDSKIELNAFTFASLLSGAS 499

Query: 279 NREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVSW 100
           +      G  I   ++K+GY +S+ C+  ALI ++ +  G +E A  VF+EM  +N +SW
Sbjct: 500 SVGAIGKGEQIHARVLKSGY-QSNQCICNALISMYAR-CGHIEAAFLVFNEMGDRNVISW 557

Query: 99  TLMITRFTQMGSPRDAILLFLDMVIAGFVPD 7
           T MIT F + G    A+ +F +M+ AG  P+
Sbjct: 558 TSMITGFAKHGFATRALEIFHEMLEAGIRPN 588



 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 43/144 (29%), Positives = 78/144 (54%), Gaps = 1/144 (0%)
 Frame = -3

Query: 459 AEEIFSSMEKTRDLVSWSAMISCYAH-NGLNLEAVLMFFEMVEFGERPNEFCFSAAIRAC 283
           + ++F  ME+  +++SW+A+I+ Y    G + EA+ +F +M+    +PN F FS+ ++AC
Sbjct: 339 SRKVFGRMEE-HNVMSWTAIITGYVQCGGRDKEALELFSKMMGGPVQPNHFTFSSVLKAC 397

Query: 282 SNREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVS 103
            N      G   +   +K G F SD CVG +LI ++ +  G ++ A K F+ +  KN VS
Sbjct: 398 GNLSDSCTGEQFYAHAVKHG-FASDDCVGNSLISMYARS-GRMDNAQKAFESLFEKNLVS 455

Query: 102 WTLMITRFTQMGSPRDAILLFLDM 31
           +  ++    +      A  LF ++
Sbjct: 456 YNTIVDACAKNLDSEGAFELFHEL 479


>ref|XP_003634143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Vitis vinifera]
          Length = 631

 Score =  203 bits (516), Expect = 2e-50
 Identities = 94/153 (61%), Positives = 119/153 (77%)
 Frame = -3

Query: 459 AEEIFSSMEKTRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRACS 280
           A  IF  M   RDLVSWSAM+SC+A+N + L+A+  F +M+E G  PNE+CF+A IRACS
Sbjct: 129 ARLIFEGMGNKRDLVSWSAMVSCFANNSMELQAIWTFLDMLELGFYPNEYCFAAVIRACS 188

Query: 279 NREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVSW 100
           N  +  +G +I+GF++KTGY E+DVCVGC LID+FVKG GDL  A KVFD+MP +N V+W
Sbjct: 189 NANHAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTW 248

Query: 99  TLMITRFTQMGSPRDAILLFLDMVIAGFVPDRF 1
           TLMITRF Q+G  RDAI LFLDM ++G+VPDRF
Sbjct: 249 TLMITRFAQLGCARDAIDLFLDMELSGYVPDRF 281



 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 52/156 (33%), Positives = 89/156 (57%), Gaps = 3/156 (1%)
 Frame = -3

Query: 459 AEEIFSSMEKTRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRACS 280
           A ++F  M + R+LV+W+ MI+ +A  G   +A+ +F +M   G  P+ F +S+ + AC+
Sbjct: 233 AYKVFDKMPE-RNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACT 291

Query: 279 NREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVK--GFGDLELALKVFDEMPVKNSV 106
                 +G  +   +++ G    DVCVGC+L+D++ K    G ++ + KVF+ MP  N +
Sbjct: 292 ELGLLALGKQLHSRVIRLG-LALDVCVGCSLVDMYAKCAADGSVDDSRKVFERMPEHNVM 350

Query: 105 SWTLMITRFTQMGS-PRDAILLFLDMVIAGFVPDRF 1
           SWT +IT + Q G   ++AI LF  M+     P+ F
Sbjct: 351 SWTAIITAYVQSGECDKEAIELFCKMISGHIWPNHF 386



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 44/148 (29%), Positives = 81/148 (54%), Gaps = 1/148 (0%)
 Frame = -3

Query: 459 AEEIFSSMEKTRDLVSWSAMISCYAHNG-LNLEAVLMFFEMVEFGERPNEFCFSAAIRAC 283
           + ++F  M +  +++SW+A+I+ Y  +G  + EA+ +F +M+     PN F FS+ ++AC
Sbjct: 337 SRKVFERMPE-HNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIWPNHFSFSSVLKAC 395

Query: 282 SNREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVS 103
            N      G  ++ + +K G   S  CVG +LI ++ +  G +E A K FD +  KN VS
Sbjct: 396 GNLSDPYTGEQVYSYAVKLG-IASVNCVGNSLISMYARS-GRMEDARKAFDILFEKNLVS 453

Query: 102 WTLMITRFTQMGSPRDAILLFLDMVIAG 19
           +  ++  + +     +A LLF ++   G
Sbjct: 454 YNAIVDGYAKNLKSEEAFLLFNEIADTG 481


>ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score =  202 bits (515), Expect = 3e-50
 Identities = 94/153 (61%), Positives = 118/153 (77%)
 Frame = -3

Query: 459 AEEIFSSMEKTRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRACS 280
           A  IF  M   RDLVSWSAM+SC+A+N +  +A+  F +M+E G  PNE+CF+A IRACS
Sbjct: 80  ARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACS 139

Query: 279 NREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVSW 100
           N  Y  +G +I+GF++KTGY E+DVCVGC LID+FVKG GDL  A KVFD+MP +N V+W
Sbjct: 140 NANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTW 199

Query: 99  TLMITRFTQMGSPRDAILLFLDMVIAGFVPDRF 1
           TLMITRF Q+G  RDAI LFLDM ++G+VPDRF
Sbjct: 200 TLMITRFAQLGCARDAIDLFLDMELSGYVPDRF 232



 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 52/156 (33%), Positives = 90/156 (57%), Gaps = 3/156 (1%)
 Frame = -3

Query: 459 AEEIFSSMEKTRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRACS 280
           A ++F  M + R+LV+W+ MI+ +A  G   +A+ +F +M   G  P+ F +S+ + AC+
Sbjct: 184 AYKVFDKMPE-RNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACT 242

Query: 279 NREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVK--GFGDLELALKVFDEMPVKNSV 106
                 +G  +   +++ G    DVCVGC+L+D++ K    G ++ + KVF++MP  N +
Sbjct: 243 ELGLLALGKQLHSRVIRLG-LALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVM 301

Query: 105 SWTLMITRFTQMGS-PRDAILLFLDMVIAGFVPDRF 1
           SWT +IT + Q G   ++AI LF  M+     P+ F
Sbjct: 302 SWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHF 337



 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 48/140 (34%), Positives = 82/140 (58%)
 Frame = -3

Query: 426 RDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRACSNREYGRIGLVI 247
           ++LVS++A++  YA N  + EA L+F E+ + G   + F F++ +   ++      G  I
Sbjct: 400 KNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQI 459

Query: 246 FGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVSWTLMITRFTQMG 67
            G L+K GY +S+ C+  ALI ++ +  G++E A +VF+EM  +N +SWT MIT F + G
Sbjct: 460 HGRLLKGGY-KSNQCICNALISMYSR-CGNIEAAFQVFNEMEDRNVISWTSMITGFAKHG 517

Query: 66  SPRDAILLFLDMVIAGFVPD 7
               A+ +F  M+  G  P+
Sbjct: 518 FATRALEMFHKMLETGTKPN 537



 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 45/148 (30%), Positives = 82/148 (55%), Gaps = 1/148 (0%)
 Frame = -3

Query: 459 AEEIFSSMEKTRDLVSWSAMISCYAHNG-LNLEAVLMFFEMVEFGERPNEFCFSAAIRAC 283
           + ++F  M +  +++SW+A+I+ Y  +G  + EA+ +F +M+    RPN F FS+ ++AC
Sbjct: 288 SRKVFEQMPE-HNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKAC 346

Query: 282 SNREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVS 103
            N      G  ++ + +K G   S  CVG +LI ++ +  G +E A K FD +  KN VS
Sbjct: 347 GNLSDPYTGEQVYSYAVKLG-IASVNCVGNSLISMYARS-GRMEDARKAFDILFEKNLVS 404

Query: 102 WTLMITRFTQMGSPRDAILLFLDMVIAG 19
           +  ++  + +     +A LLF ++   G
Sbjct: 405 YNAIVDGYAKNLKSEEAFLLFNEIADTG 432


>emb|CBI23556.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  202 bits (515), Expect = 3e-50
 Identities = 94/153 (61%), Positives = 118/153 (77%)
 Frame = -3

Query: 459 AEEIFSSMEKTRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRACS 280
           A  IF  M   RDLVSWSAM+SC+A+N +  +A+  F +M+E G  PNE+CF+A IRACS
Sbjct: 98  ARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACS 157

Query: 279 NREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVSW 100
           N  Y  +G +I+GF++KTGY E+DVCVGC LID+FVKG GDL  A KVFD+MP +N V+W
Sbjct: 158 NANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTW 217

Query: 99  TLMITRFTQMGSPRDAILLFLDMVIAGFVPDRF 1
           TLMITRF Q+G  RDAI LFLDM ++G+VPDRF
Sbjct: 218 TLMITRFAQLGCARDAIDLFLDMELSGYVPDRF 250



 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 52/156 (33%), Positives = 90/156 (57%), Gaps = 3/156 (1%)
 Frame = -3

Query: 459 AEEIFSSMEKTRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRACS 280
           A ++F  M + R+LV+W+ MI+ +A  G   +A+ +F +M   G  P+ F +S+ + AC+
Sbjct: 202 AYKVFDKMPE-RNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACT 260

Query: 279 NREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVK--GFGDLELALKVFDEMPVKNSV 106
                 +G  +   +++ G    DVCVGC+L+D++ K    G ++ + KVF++MP  N +
Sbjct: 261 ELGLLALGKQLHSRVIRLG-LALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVM 319

Query: 105 SWTLMITRFTQMGS-PRDAILLFLDMVIAGFVPDRF 1
           SWT +IT + Q G   ++AI LF  M+     P+ F
Sbjct: 320 SWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHF 355



 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 48/140 (34%), Positives = 82/140 (58%)
 Frame = -3

Query: 426 RDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRACSNREYGRIGLVI 247
           ++LVS++A++  YA N  + EA L+F E+ + G   + F F++ +   ++      G  I
Sbjct: 418 KNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQI 477

Query: 246 FGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVSWTLMITRFTQMG 67
            G L+K GY +S+ C+  ALI ++ +  G++E A +VF+EM  +N +SWT MIT F + G
Sbjct: 478 HGRLLKGGY-KSNQCICNALISMYSR-CGNIEAAFQVFNEMEDRNVISWTSMITGFAKHG 535

Query: 66  SPRDAILLFLDMVIAGFVPD 7
               A+ +F  M+  G  P+
Sbjct: 536 FATRALEMFHKMLETGTKPN 555



 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 45/148 (30%), Positives = 82/148 (55%), Gaps = 1/148 (0%)
 Frame = -3

Query: 459 AEEIFSSMEKTRDLVSWSAMISCYAHNG-LNLEAVLMFFEMVEFGERPNEFCFSAAIRAC 283
           + ++F  M +  +++SW+A+I+ Y  +G  + EA+ +F +M+    RPN F FS+ ++AC
Sbjct: 306 SRKVFEQMPE-HNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKAC 364

Query: 282 SNREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVS 103
            N      G  ++ + +K G   S  CVG +LI ++ +  G +E A K FD +  KN VS
Sbjct: 365 GNLSDPYTGEQVYSYAVKLG-IASVNCVGNSLISMYARS-GRMEDARKAFDILFEKNLVS 422

Query: 102 WTLMITRFTQMGSPRDAILLFLDMVIAG 19
           +  ++  + +     +A LLF ++   G
Sbjct: 423 YNAIVDGYAKNLKSEEAFLLFNEIADTG 450


>ref|XP_006290593.1| hypothetical protein CARUB_v10016682mg [Capsella rubella]
           gi|482559300|gb|EOA23491.1| hypothetical protein
           CARUB_v10016682mg [Capsella rubella]
          Length = 850

 Score =  194 bits (493), Expect = 1e-47
 Identities = 93/156 (59%), Positives = 121/156 (77%), Gaps = 2/156 (1%)
 Frame = -3

Query: 462 KAEEIFSSMEK--TRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIR 289
           KAE++F +M +   RD+VSWSAM++C+ +NG  L+A+ +F E +E G  PN++C++A IR
Sbjct: 115 KAEDVFETMGRFGKRDVVSWSAMMACFGNNGRELDAIRLFVEFLELGLVPNDYCYTAVIR 174

Query: 288 ACSNREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNS 109
           ACSN EY  +G VI GFLMKTG+FESDVCVGC+LID+FVKG  +LE A KVFD+M   N 
Sbjct: 175 ACSNSEYVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGDNNLESAYKVFDKMSELNV 234

Query: 108 VSWTLMITRFTQMGSPRDAILLFLDMVIAGFVPDRF 1
           V+WTLMITR  QMG PR+AI  FLDMV++GF  D+F
Sbjct: 235 VTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKF 270



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 47/157 (29%), Positives = 82/157 (52%), Gaps = 4/157 (2%)
 Frame = -3

Query: 459 AEEIFSSMEKTRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRACS 280
           A ++F  M +  ++V+W+ MI+     G   EA+  F +MV  G   ++F  S+   AC+
Sbjct: 222 AYKVFDKMSEL-NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACA 280

Query: 279 NREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGD--LELALKVFDEMPVKNSV 106
             E   +G  +  + +++G  +    V C+L+D++ K   D  ++   KVFD M   + +
Sbjct: 281 ELENLSLGKQLHSWAIRSGLADD---VECSLVDMYAKCSVDSSVDDCRKVFDRMQHHSVM 337

Query: 105 SWTLMITRFTQ-MGSPRDAILLFLDMVIAGFV-PDRF 1
           SWT +IT + Q      +AI LF +M+  G V P+ F
Sbjct: 338 SWTALITGYMQNCNLAAEAINLFCEMITQGHVEPNHF 374



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 2/124 (1%)
 Frame = -3

Query: 453 EIFSSMEKTRDLVSWSAMISCYAHN-GLNLEAVLMFFEMVEFGE-RPNEFCFSAAIRACS 280
           ++F  M+    ++SW+A+I+ Y  N  L  EA+ +F EM+  G   PN F FS+AI+AC 
Sbjct: 326 KVFDRMQH-HSVMSWTALITGYMQNCNLAAEAINLFCEMITQGHVEPNHFTFSSAIKACG 384

Query: 279 NREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVSW 100
           N    R+G  + G   K G   S+  V  ++I +FVK    +E A + F+ +  KN VS+
Sbjct: 385 NILDPRVGKQVLGHAFKRG-LASNSSVANSVISMFVKS-DRMEDARRAFESLSEKNLVSY 442

Query: 99  TLMI 88
              +
Sbjct: 443 NTFL 446


>ref|XP_006404168.1| hypothetical protein EUTSA_v10010119mg [Eutrema salsugineum]
           gi|557105287|gb|ESQ45621.1| hypothetical protein
           EUTSA_v10010119mg [Eutrema salsugineum]
          Length = 850

 Score =  194 bits (492), Expect = 1e-47
 Identities = 94/156 (60%), Positives = 120/156 (76%), Gaps = 2/156 (1%)
 Frame = -3

Query: 462 KAEEIFSSMEK--TRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIR 289
           +AE++F +ME+   RD+VSWSAM+ C+A+NG  L A+ +F   +E G  PN++C++A IR
Sbjct: 115 RAEDVFETMERFGKRDVVSWSAMMVCFANNGKELNAIELFVRFLELGFVPNDYCYTAVIR 174

Query: 288 ACSNREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNS 109
           ACSN EY  IG VI GFLMKTG+FESDVCVGC+LID+FVKG  +LE A KVFD+M   N 
Sbjct: 175 ACSNSEYVSIGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENNLENAYKVFDQMSELNV 234

Query: 108 VSWTLMITRFTQMGSPRDAILLFLDMVIAGFVPDRF 1
           V+WTLMITR  QMG PR+AI  FLDMV++GF  D+F
Sbjct: 235 VTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKF 270



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 48/157 (30%), Positives = 83/157 (52%), Gaps = 4/157 (2%)
 Frame = -3

Query: 459 AEEIFSSMEKTRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRACS 280
           A ++F  M +  ++V+W+ MI+     G   EA+  F +MV  G   ++F  S+   AC+
Sbjct: 222 AYKVFDQMSEL-NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACA 280

Query: 279 NREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGD--LELALKVFDEMPVKNSV 106
             E   +G  +  + +++G  +    VGC+L+D++ K   D  L+   KVFD +   + +
Sbjct: 281 ELENLSLGKQLHSWAIRSGLADD---VGCSLVDMYAKCSVDDSLDDCRKVFDRIQDHSVM 337

Query: 105 SWTLMITRFTQ-MGSPRDAILLFLDMVIAGFV-PDRF 1
           SWT +IT + Q      +AI LF +M+  G V P+ F
Sbjct: 338 SWTALITGYMQNCNLDTEAISLFCEMITQGRVQPNHF 374



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 40/113 (35%), Positives = 63/113 (55%), Gaps = 2/113 (1%)
 Frame = -3

Query: 420 LVSWSAMISCYAHN-GLNLEAVLMFFEMVEFGE-RPNEFCFSAAIRACSNREYGRIGLVI 247
           ++SW+A+I+ Y  N  L+ EA+ +F EM+  G  +PN F FS+A +AC N    R G  +
Sbjct: 336 VMSWTALITGYMQNCNLDTEAISLFCEMITQGRVQPNHFTFSSAFKACGNLSDPRGGKQV 395

Query: 246 FGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVSWTLMI 88
                K G   S+ CV  ++I +FVK    +E A + F+ +  KN VS+   +
Sbjct: 396 LAHAFKRG-LASNNCVANSVISMFVKA-DRMEDARRAFESLSEKNLVSYNTFL 446


>ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49170, chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  192 bits (489), Expect = 3e-47
 Identities = 90/154 (58%), Positives = 116/154 (75%)
 Frame = -3

Query: 462 KAEEIFSSMEKTRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRAC 283
           KA  IF  M  +RDL+SWSAM+SC+A+N +   A+L F +M+E G  PNE+CF+AA RAC
Sbjct: 119 KATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRAC 178

Query: 282 SNREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVS 103
           S  E+  +G  IFGF++KTGY +SDVCVGC LID+FVKG GDL  A KVF++MP +N+V+
Sbjct: 179 STAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVT 238

Query: 102 WTLMITRFTQMGSPRDAILLFLDMVIAGFVPDRF 1
           WTLMITR  Q G   +AI LFLDM+ +G+ PDRF
Sbjct: 239 WTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRF 272



 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 52/156 (33%), Positives = 83/156 (53%), Gaps = 3/156 (1%)
 Frame = -3

Query: 459 AEEIFSSMEKTRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRACS 280
           A ++F  M + R+ V+W+ MI+     G   EA+ +F +M+  G  P+ F  S  I AC+
Sbjct: 224 AFKVFEKMPE-RNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACA 282

Query: 279 NREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGF--GDLELALKVFDEMPVKNSV 106
           N E   +G  +    ++ G    D CVGC LI+++ K    G +  A K+FD++   N  
Sbjct: 283 NMELLLLGQQLHSQAIRHG-LTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVF 341

Query: 105 SWTLMITRFTQMGS-PRDAILLFLDMVIAGFVPDRF 1
           SWT MIT + Q G    +A+ LF  M++   +P+ F
Sbjct: 342 SWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHF 377



 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 48/154 (31%), Positives = 81/154 (52%), Gaps = 1/154 (0%)
 Frame = -3

Query: 459 AEEIFSSMEKTRDLVSWSAMISCYAHNG-LNLEAVLMFFEMVEFGERPNEFCFSAAIRAC 283
           A +IF  +    ++ SW+AMI+ Y   G  + EA+ +F  M+     PN F FS+ ++AC
Sbjct: 328 ARKIFDQI-LDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKAC 386

Query: 282 SNREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVS 103
           +N    RIG  +F   +K G F S  CV  +LI ++ +  G ++ A K FD +  KN +S
Sbjct: 387 ANLAALRIGEQVFTHAVKLG-FSSVNCVANSLISMYARS-GRIDDARKAFDILFEKNLIS 444

Query: 102 WTLMITRFTQMGSPRDAILLFLDMVIAGFVPDRF 1
           +  +I  + +  +  +A+ LF ++   G     F
Sbjct: 445 YNTVIDAYAKNLNSEEALELFNEIEDQGMGASAF 478



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 42/141 (29%), Positives = 77/141 (54%), Gaps = 1/141 (0%)
 Frame = -3

Query: 426 RDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRACSNREYGRIGLVI 247
           ++L+S++ +I  YA N  + EA+ +F E+ + G   + F F++ +   ++      G  I
Sbjct: 440 KNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQI 499

Query: 246 FGFLMKTGY-FESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVSWTLMITRFTQM 70
              ++K+G      VC   ALI ++ +  G++E A +VF++M  +N +SWT +IT F + 
Sbjct: 500 HARVIKSGLKLNQSVCN--ALISMYSR-CGNIESAFQVFEDMEDRNVISWTSIITGFAKH 556

Query: 69  GSPRDAILLFLDMVIAGFVPD 7
           G    A+ LF  M+  G  P+
Sbjct: 557 GFATQALELFHKMLEEGVRPN 577



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 5/120 (4%)
 Frame = -3

Query: 459 AEEIFSSMEKTRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRACS 280
           A ++F  ME  R+++SW+++I+ +A +G   +A+ +F +M+E G RPNE  + A + ACS
Sbjct: 531 AFQVFEDMED-RNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACS 589

Query: 279 NREYGRIGLVIFGFL-MKTGYFESDVCVG----CALIDLFVKGFGDLELALKVFDEMPVK 115
           +     +GLV  G+   K+ Y E  V         ++D+  +  G L  A++  + MP K
Sbjct: 590 H-----VGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRS-GSLSEAIQFINSMPYK 643


>ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  192 bits (488), Expect = 4e-47
 Identities = 89/154 (57%), Positives = 117/154 (75%)
 Frame = -3

Query: 462 KAEEIFSSMEKTRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRAC 283
           KA  IF  M  +RDL+SWSAM+SC+A+N +   A+L F +M+E G  PNE+CF+AA RAC
Sbjct: 119 KATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRAC 178

Query: 282 SNREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVS 103
           S  E+  +G  IFGF++KTGY +SDVCVGC LID+FVKG GDL  A KVF++MP +N+V+
Sbjct: 179 STAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVT 238

Query: 102 WTLMITRFTQMGSPRDAILLFLDMVIAGFVPDRF 1
           WTLMITR  Q G   +AI LFL+M+++G+ PDRF
Sbjct: 239 WTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRF 272



 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 53/156 (33%), Positives = 83/156 (53%), Gaps = 3/156 (1%)
 Frame = -3

Query: 459 AEEIFSSMEKTRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRACS 280
           A ++F  M + R+ V+W+ MI+     G   EA+ +F EM+  G  P+ F  S  I AC+
Sbjct: 224 AFKVFEKMPE-RNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACA 282

Query: 279 NREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGF--GDLELALKVFDEMPVKNSV 106
           N E   +G  +    ++ G    D CVGC LI+++ K    G +  A K+FD++   N  
Sbjct: 283 NMELLLLGQQLHSQAIRHG-LTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVF 341

Query: 105 SWTLMITRFTQMGS-PRDAILLFLDMVIAGFVPDRF 1
           SWT MIT + Q G    +A+ LF  M++   +P+ F
Sbjct: 342 SWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHF 377



 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 48/154 (31%), Positives = 81/154 (52%), Gaps = 1/154 (0%)
 Frame = -3

Query: 459 AEEIFSSMEKTRDLVSWSAMISCYAHNG-LNLEAVLMFFEMVEFGERPNEFCFSAAIRAC 283
           A +IF  +    ++ SW+AMI+ Y   G  + EA+ +F  M+     PN F FS+ ++AC
Sbjct: 328 ARKIFDQI-LDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKAC 386

Query: 282 SNREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVS 103
           +N    RIG  +F   +K G F S  CV  +LI ++ +  G ++ A K FD +  KN +S
Sbjct: 387 ANLAALRIGEQVFTHAVKLG-FSSVNCVANSLISMYARS-GRIDDARKAFDILFEKNLIS 444

Query: 102 WTLMITRFTQMGSPRDAILLFLDMVIAGFVPDRF 1
           +  +I  + +  +  +A+ LF ++   G     F
Sbjct: 445 YNTVIDAYAKNLNSEEALELFNEIEDQGMGASAF 478



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 42/141 (29%), Positives = 77/141 (54%), Gaps = 1/141 (0%)
 Frame = -3

Query: 426 RDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRACSNREYGRIGLVI 247
           ++L+S++ +I  YA N  + EA+ +F E+ + G   + F F++ +   ++      G  I
Sbjct: 440 KNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQI 499

Query: 246 FGFLMKTGY-FESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVSWTLMITRFTQM 70
              ++K+G      VC   ALI ++ +  G++E A +VF++M  +N +SWT +IT F + 
Sbjct: 500 HARVIKSGLKLNQSVCN--ALISMYSR-CGNIESAFQVFEDMEDRNVISWTSIITGFAKH 556

Query: 69  GSPRDAILLFLDMVIAGFVPD 7
           G    A+ LF  M+  G  P+
Sbjct: 557 GFATQALELFHKMLEEGVRPN 577


>ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
           DEFECTIVE 2261; Flags: Precursor
           gi|58013018|gb|AAW62962.1| embryo-defective 2261
           [Arabidopsis thaliana] gi|58013020|gb|AAW62963.1|
           embryo-defective 2261 [Arabidopsis thaliana]
           gi|332644986|gb|AEE78507.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  189 bits (480), Expect = 3e-46
 Identities = 90/156 (57%), Positives = 118/156 (75%), Gaps = 2/156 (1%)
 Frame = -3

Query: 462 KAEEIFSSMEK--TRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIR 289
           KAE++F +M +   RD+VSWSAM++CY +NG  L+A+ +F E +E G  PN++C++A IR
Sbjct: 115 KAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIR 174

Query: 288 ACSNREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNS 109
           ACSN ++  +G V  GFLMKTG+FESDVCVGC+LID+FVKG    E A KVFD+M   N 
Sbjct: 175 ACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNV 234

Query: 108 VSWTLMITRFTQMGSPRDAILLFLDMVIAGFVPDRF 1
           V+WTLMITR  QMG PR+AI  FLDMV++GF  D+F
Sbjct: 235 VTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKF 270



 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 46/157 (29%), Positives = 82/157 (52%), Gaps = 4/157 (2%)
 Frame = -3

Query: 459 AEEIFSSMEKTRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRACS 280
           A ++F  M +  ++V+W+ MI+     G   EA+  F +MV  G   ++F  S+   AC+
Sbjct: 222 AYKVFDKMSEL-NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACA 280

Query: 279 NREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVK--GFGDLELALKVFDEMPVKNSV 106
             E   +G  +  + +++G  +    V C+L+D++ K    G ++   KVFD M   + +
Sbjct: 281 ELENLSLGKQLHSWAIRSGLVDD---VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVM 337

Query: 105 SWTLMITRFTQ-MGSPRDAILLFLDMVIAGFV-PDRF 1
           SWT +IT + +      +AI LF +M+  G V P+ F
Sbjct: 338 SWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHF 374



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 2/124 (1%)
 Frame = -3

Query: 453 EIFSSMEKTRDLVSWSAMISCYAHN-GLNLEAVLMFFEMVEFGE-RPNEFCFSAAIRACS 280
           ++F  ME    ++SW+A+I+ Y  N  L  EA+ +F EM+  G   PN F FS+A +AC 
Sbjct: 326 KVFDRMED-HSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACG 384

Query: 279 NREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVSW 100
           N    R+G  + G   K G   S+  V  ++I +FVK    +E A + F+ +  KN VS+
Sbjct: 385 NLSDPRVGKQVLGQAFKRG-LASNSSVANSVISMFVKS-DRMEDAQRAFESLSEKNLVSY 442

Query: 99  TLMI 88
              +
Sbjct: 443 NTFL 446


>emb|CAB66396.1| putative protein [Arabidopsis thaliana]
          Length = 1113

 Score =  189 bits (480), Expect = 3e-46
 Identities = 90/156 (57%), Positives = 118/156 (75%), Gaps = 2/156 (1%)
 Frame = -3

Query: 462 KAEEIFSSMEK--TRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIR 289
           KAE++F +M +   RD+VSWSAM++CY +NG  L+A+ +F E +E G  PN++C++A IR
Sbjct: 115 KAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIR 174

Query: 288 ACSNREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNS 109
           ACSN ++  +G V  GFLMKTG+FESDVCVGC+LID+FVKG    E A KVFD+M   N 
Sbjct: 175 ACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNV 234

Query: 108 VSWTLMITRFTQMGSPRDAILLFLDMVIAGFVPDRF 1
           V+WTLMITR  QMG PR+AI  FLDMV++GF  D+F
Sbjct: 235 VTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKF 270



 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 46/157 (29%), Positives = 82/157 (52%), Gaps = 4/157 (2%)
 Frame = -3

Query: 459 AEEIFSSMEKTRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRACS 280
           A ++F  M +  ++V+W+ MI+     G   EA+  F +MV  G   ++F  S+   AC+
Sbjct: 222 AYKVFDKMSEL-NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACA 280

Query: 279 NREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVK--GFGDLELALKVFDEMPVKNSV 106
             E   +G  +  + +++G  +    V C+L+D++ K    G ++   KVFD M   + +
Sbjct: 281 ELENLSLGKQLHSWAIRSGLVDD---VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVM 337

Query: 105 SWTLMITRFTQ-MGSPRDAILLFLDMVIAGFV-PDRF 1
           SWT +IT + +      +AI LF +M+  G V P+ F
Sbjct: 338 SWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHF 374



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 2/124 (1%)
 Frame = -3

Query: 453 EIFSSMEKTRDLVSWSAMISCYAHN-GLNLEAVLMFFEMVEFGE-RPNEFCFSAAIRACS 280
           ++F  ME    ++SW+A+I+ Y  N  L  EA+ +F EM+  G   PN F FS+A +AC 
Sbjct: 326 KVFDRMED-HSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACG 384

Query: 279 NREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVSW 100
           N    R+G  + G   K G   S+  V  ++I +FVK    +E A + F+ +  KN VS+
Sbjct: 385 NLSDPRVGKQVLGQAFKRG-LASNSSVANSVISMFVKS-DRMEDAQRAFESLSEKNLVSY 442

Query: 99  TLMI 88
              +
Sbjct: 443 NTFL 446


>gb|EMJ18239.1| hypothetical protein PRUPE_ppa001611mg [Prunus persica]
          Length = 793

 Score =  186 bits (473), Expect = 2e-45
 Identities = 87/154 (56%), Positives = 119/154 (77%)
 Frame = -3

Query: 462 KAEEIFSSMEKTRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRAC 283
           KA  IF +M   R+LVSWSAM+SC+A+N + LEA+L F +M+E G  PNE+CF++ IRAC
Sbjct: 63  KANSIFENMGNKRNLVSWSAMVSCFANNDMGLEAILTFLDMLEDGFYPNEYCFASVIRAC 122

Query: 282 SNREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVS 103
           SN +  RIG +IFG ++K+GY  SDVCVGC+LID+F KG G+L+ A KVF+ MP  ++V+
Sbjct: 123 SNAQNIRIGNIIFGSVIKSGYLGSDVCVGCSLIDMFAKGSGELDDAYKVFETMPETDAVT 182

Query: 102 WTLMITRFTQMGSPRDAILLFLDMVIAGFVPDRF 1
           WTLMITR  QMG P +AI L++DM+ +G +PD+F
Sbjct: 183 WTLMITRLAQMGCPGEAIDLYVDMLWSGLMPDQF 216



 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 52/156 (33%), Positives = 87/156 (55%), Gaps = 3/156 (1%)
 Frame = -3

Query: 459 AEEIFSSMEKTRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRACS 280
           A ++F +M +T D V+W+ MI+  A  G   EA+ ++ +M+  G  P++F  S  I AC+
Sbjct: 168 AYKVFETMPET-DAVTWTLMITRLAQMGCPGEAIDLYVDMLWSGLMPDQFTLSGVISACT 226

Query: 279 NREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVK--GFGDLELALKVFDEMPVKNSV 106
             +   +G  +  +++++G      CVGC L+D++ K    G ++ A KVFD MP  N +
Sbjct: 227 KLDSLSLGQQLHSWVIRSG-LALGHCVGCCLVDMYAKCAADGSMDDARKVFDRMPNHNVL 285

Query: 105 SWTLMITRFTQMG-SPRDAILLFLDMVIAGFVPDRF 1
           SWT +I  + Q G    +AI LF+ M+     P+ F
Sbjct: 286 SWTSIINGYVQSGEGDEEAIKLFVGMMTGHVPPNHF 321



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 44/154 (28%), Positives = 80/154 (51%), Gaps = 1/154 (0%)
 Frame = -3

Query: 459 AEEIFSSMEKTRDLVSWSAMISCYAHNGL-NLEAVLMFFEMVEFGERPNEFCFSAAIRAC 283
           A ++F  M    +++SW+++I+ Y  +G  + EA+ +F  M+     PN F FS+ ++AC
Sbjct: 272 ARKVFDRMPN-HNVLSWTSIINGYVQSGEGDEEAIKLFVGMMTGHVPPNHFTFSSILKAC 330

Query: 282 SNREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVS 103
           +N    R G  +    +K G   S  CVG +LI ++ +  G +E A K FD +  KN +S
Sbjct: 331 ANLSDLRKGDQVHSLAVKLG-LASVNCVGNSLISMYSRS-GQVEDARKAFDILYEKNLIS 388

Query: 102 WTLMITRFTQMGSPRDAILLFLDMVIAGFVPDRF 1
           +  ++  + +     +A  +F ++   GF    F
Sbjct: 389 YNTIVDAYAKHSDTEEAFGIFHEIQDTGFGASAF 422



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 42/140 (30%), Positives = 77/140 (55%)
 Frame = -3

Query: 426 RDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRACSNREYGRIGLVI 247
           ++L+S++ ++  YA +    EA  +F E+ + G   + F FS+ +   ++      G  I
Sbjct: 384 KNLISYNTIVDAYAKHSDTEEAFGIFHEIQDTGFGASAFTFSSLLSGAASICAVGKGEQI 443

Query: 246 FGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVSWTLMITRFTQMG 67
              ++K+G FES+  +  AL+ ++ +  G+++ A  VF+EM   N +SWT MIT F + G
Sbjct: 444 HARIIKSG-FESNQGICNALVSMYSR-CGNIDAAFAVFNEMEDWNVISWTSMITGFAKHG 501

Query: 66  SPRDAILLFLDMVIAGFVPD 7
               A+ +F  M+ AG  P+
Sbjct: 502 YAAAAVEMFNKMLEAGLKPN 521


>ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata] gi|297323492|gb|EFH53913.1| hypothetical protein
           ARALYDRAFT_323502 [Arabidopsis lyrata subsp. lyrata]
          Length = 1112

 Score =  186 bits (472), Expect = 3e-45
 Identities = 88/156 (56%), Positives = 118/156 (75%), Gaps = 2/156 (1%)
 Frame = -3

Query: 462 KAEEIFSSMEK--TRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIR 289
           KA+++F +M +   RD+VSWSAM++C+ +NG   +A+ +F E +E G  PN++C++A IR
Sbjct: 115 KAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAVIR 174

Query: 288 ACSNREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNS 109
           ACSN ++  +G VI GFLMKTG+FESDVCVGC+LID+FVKG    E A KVFD+M   N 
Sbjct: 175 ACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNV 234

Query: 108 VSWTLMITRFTQMGSPRDAILLFLDMVIAGFVPDRF 1
           V+WTLMITR  QMG PR+AI  FLDMV++GF  D+F
Sbjct: 235 VTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKF 270



 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 47/157 (29%), Positives = 82/157 (52%), Gaps = 4/157 (2%)
 Frame = -3

Query: 459 AEEIFSSMEKTRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRACS 280
           A ++F  M +  ++V+W+ MI+     G   EA+  F +MV  G   ++F  S+   AC+
Sbjct: 222 AYKVFDKMSEL-NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACA 280

Query: 279 NREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVK--GFGDLELALKVFDEMPVKNSV 106
             E   +G  +  + +++G  +    V C+L+D++ K    G ++   KVFD M   + +
Sbjct: 281 ELENLSLGRQLHSWAIRSGLADD---VECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVM 337

Query: 105 SWTLMITRFTQ-MGSPRDAILLFLDMVIAGFV-PDRF 1
           SWT +IT + Q      +AI LF +M+  G V P+ F
Sbjct: 338 SWTALITGYMQNCNLATEAINLFSEMITQGHVEPNHF 374



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 2/124 (1%)
 Frame = -3

Query: 453 EIFSSMEKTRDLVSWSAMISCYAHN-GLNLEAVLMFFEMVEFGE-RPNEFCFSAAIRACS 280
           ++F  M+    ++SW+A+I+ Y  N  L  EA+ +F EM+  G   PN F FS+A +AC 
Sbjct: 326 KVFDRMQD-HSVMSWTALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACG 384

Query: 279 NREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVSW 100
           N    R+G  + G   K G   S+  V  ++I +FVK    +E A   F+ +  KN VS+
Sbjct: 385 NVSDPRVGKQVLGHAFKRG-LASNSSVSNSVISMFVK-CDRMEDARTAFESLSEKNLVSY 442

Query: 99  TLMI 88
              +
Sbjct: 443 NTFL 446


>gb|EXC74714.1| hypothetical protein L484_000366 [Morus notabilis]
          Length = 841

 Score =  184 bits (468), Expect = 8e-45
 Identities = 86/154 (55%), Positives = 118/154 (76%)
 Frame = -3

Query: 462 KAEEIFSSMEKTRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRAC 283
           KA+ IF SM   R+LVSW++++SC+A+N L  EA++ F +M+E G  P+E+CF+A  RAC
Sbjct: 111 KADSIFRSMGNKRNLVSWTSIVSCFANNDLGFEAIVAFLDMLENGFWPDEYCFAAVFRAC 170

Query: 282 SNREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVS 103
            +     IG  IFGF++K+GYF++D+CVGC+LID+F KG GDL  A KVFD+MP KN V+
Sbjct: 171 LDTGDLSIGETIFGFVIKSGYFKADLCVGCSLIDMFAKGGGDLNSAYKVFDKMPEKNVVT 230

Query: 102 WTLMITRFTQMGSPRDAILLFLDMVIAGFVPDRF 1
           WTLMITRF Q+G  R+A+ LFLDMV++  VPD+F
Sbjct: 231 WTLMITRFAQLGFAREAVDLFLDMVLSDLVPDQF 264



 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 51/156 (32%), Positives = 85/156 (54%), Gaps = 3/156 (1%)
 Frame = -3

Query: 459 AEEIFSSMEKTRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRACS 280
           A ++F  M + +++V+W+ MI+ +A  G   EAV +F +MV     P++F FS+ + AC+
Sbjct: 216 AYKVFDKMPE-KNVVTWTLMITRFAQLGFAREAVDLFLDMVLSDLVPDQFTFSSVMSACA 274

Query: 279 NREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVK--GFGDLELALKVFDEMPVKNSV 106
             E    G  +   +++ G    +  VGC L+DL+ K    G ++ + KVFD M   N  
Sbjct: 275 ELELLSFGKQLHSQVIRRG-LAFNHYVGCCLVDLYAKCAADGSMDESRKVFDHMTNHNVT 333

Query: 105 SWTLMITRFTQMGSP-RDAILLFLDMVIAGFVPDRF 1
           SWT +IT + + G    +AI LF +M+     P+ F
Sbjct: 334 SWTALITGYVRNGGRYHEAIKLFCEMISGHVRPNHF 369



 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 41/142 (28%), Positives = 75/142 (52%), Gaps = 1/142 (0%)
 Frame = -3

Query: 462 KAEEIFSSMEKTRDLVSWSAMISCYAHNGLNL-EAVLMFFEMVEFGERPNEFCFSAAIRA 286
           ++ ++F  M    ++ SW+A+I+ Y  NG    EA+ +F EM+    RPN F FS+ ++A
Sbjct: 319 ESRKVFDHMTN-HNVTSWTALITGYVRNGGRYHEAIKLFCEMISGHVRPNHFTFSSILKA 377

Query: 285 CSNREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSV 106
            ++      G  +    +K G   SD CVG +LI ++ +    +E + K FD +  KN +
Sbjct: 378 SASLSDLSTGKQVHSLAVKLG-LASDNCVGNSLISMYAQS-RQMEYSRKAFDNLFDKNLI 435

Query: 105 SWTLMITRFTQMGSPRDAILLF 40
           S+  ++  + +    ++A  LF
Sbjct: 436 SYNTIVDAYVKSFESKEAFDLF 457


>gb|EXC31503.1| hypothetical protein L484_001299 [Morus notabilis]
          Length = 348

 Score =  184 bits (468), Expect = 8e-45
 Identities = 86/154 (55%), Positives = 118/154 (76%)
 Frame = -3

Query: 462 KAEEIFSSMEKTRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRAC 283
           KA+ IF SM   R+LVSW++++SC+A+N L  EA++ F +M+E G  P+E+CF+A  RAC
Sbjct: 111 KADSIFRSMGNKRNLVSWTSIVSCFANNDLGFEAIVAFLDMLENGFWPDEYCFAAVFRAC 170

Query: 282 SNREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVS 103
            +     IG  IFGF++K+GYF++D+CVGC+LID+F KG GDL  A KVFD+MP KN V+
Sbjct: 171 LDTGDLSIGETIFGFVIKSGYFKADLCVGCSLIDMFAKGGGDLNSAYKVFDKMPEKNVVT 230

Query: 102 WTLMITRFTQMGSPRDAILLFLDMVIAGFVPDRF 1
           WTLMITRF Q+G  R+A+ LFLDMV++  VPD+F
Sbjct: 231 WTLMITRFAQLGFAREAVDLFLDMVLSDLVPDQF 264



 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 44/133 (33%), Positives = 74/133 (55%), Gaps = 2/133 (1%)
 Frame = -3

Query: 459 AEEIFSSMEKTRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRACS 280
           A ++F  M + +++V+W+ MI+ +A  G   EAV +F +MV     P++F FS+ + AC+
Sbjct: 216 AYKVFDKMPE-KNVVTWTLMITRFAQLGFAREAVDLFLDMVLSDLVPDQFTFSSVMSACA 274

Query: 279 NREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVK--GFGDLELALKVFDEMPVKNSV 106
             E    G  +   +++ G    +  VGC L+DL+ K    G ++ + KVFD M   N  
Sbjct: 275 ELELLSFGKQLHSQVIRRG-LAFNHYVGCCLVDLYAKCAADGSMDESRKVFDHMTNHNVT 333

Query: 105 SWTLMITRFTQMG 67
           SWT +IT + + G
Sbjct: 334 SWTALITGYVRNG 346


>ref|XP_002522011.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538815|gb|EEF40415.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 585

 Score =  181 bits (458), Expect = 1e-43
 Identities = 87/153 (56%), Positives = 112/153 (73%)
 Frame = -3

Query: 459 AEEIFSSMEKTRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRACS 280
           A +IF SM   RDLVSWSA+ISCYA NGL  +A+ ++ +M+  G  PNE+C+SA I++CS
Sbjct: 129 ANDIFISMGNKRDLVSWSALISCYATNGLEFDAIRVYIDMLVSGFFPNEYCYSAVIKSCS 188

Query: 279 NREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVSW 100
           NRE    G +IFG L+K GY  S VCVGCALID++ KG GD+E A KVFD M  +N V+W
Sbjct: 189 NRENFSYGEIIFGSLIKCGYLNSHVCVGCALIDMYAKGCGDVEGACKVFDNMSERNIVTW 248

Query: 99  TLMITRFTQMGSPRDAILLFLDMVIAGFVPDRF 1
           TLMI+RF Q+G  RDAI LF  M+ +GF+PD +
Sbjct: 249 TLMISRFQQLGYYRDAIDLFNHMIFSGFMPDNY 281



 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 52/154 (33%), Positives = 87/154 (56%), Gaps = 3/154 (1%)
 Frame = -3

Query: 453 EIFSSMEKTRDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRACSNR 274
           ++F +M + R++V+W+ MIS +   G   +A+ +F  M+  G  P+ +  S  + AC+  
Sbjct: 235 KVFDNMSE-RNIVTWTLMISRFQQLGYYRDAIDLFNHMIFSGFMPDNYTLSGVVSACAEL 293

Query: 273 EYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGF--GDLELALKVFDEMPVKNSVSW 100
               +G  +  + +K+G    DVCVGC+L+D++ K    G L+ + KVFD M   N +SW
Sbjct: 294 GLLSLGKELHSWAIKSG-LVYDVCVGCSLVDMYAKCAVDGSLDDSRKVFDRMTNHNVMSW 352

Query: 99  TLMITRFTQMG-SPRDAILLFLDMVIAGFVPDRF 1
           T +IT + Q G S  +A  LFL+M+     P+ F
Sbjct: 353 TAIITGYVQNGRSDMEATELFLEMIEGHVKPNHF 386



 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 49/154 (31%), Positives = 87/154 (56%), Gaps = 1/154 (0%)
 Frame = -3

Query: 459 AEEIFSSMEKTRDLVSWSAMISCYAHNGLN-LEAVLMFFEMVEFGERPNEFCFSAAIRAC 283
           + ++F  M    +++SW+A+I+ Y  NG + +EA  +F EM+E   +PN F FS+ ++AC
Sbjct: 337 SRKVFDRMTN-HNVMSWTAIITGYVQNGRSDMEATELFLEMIEGHVKPNHFTFSSILKAC 395

Query: 282 SNREYGRIGLVIFGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVS 103
           +N     +G   +   +K G F S  CVG +LI ++ +   ++E A K FD +  KN VS
Sbjct: 396 ANLSDLHLGEQFYAHAVKLG-FASVNCVGNSLISMYSR-CDNMENARKAFDVLFEKNLVS 453

Query: 102 WTLMITRFTQMGSPRDAILLFLDMVIAGFVPDRF 1
           +  ++  + +  +  +A  LF ++   GFV + F
Sbjct: 454 YNTIVEAYAKGLNSEEAFELFNEIEDTGFVVNAF 487



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 39/133 (29%), Positives = 73/133 (54%)
 Frame = -3

Query: 426 RDLVSWSAMISCYAHNGLNLEAVLMFFEMVEFGERPNEFCFSAAIRACSNREYGRIGLVI 247
           ++LVS++ ++  YA    + EA  +F E+ + G   N F F++ +   S+      G  I
Sbjct: 449 KNLVSYNTIVEAYAKGLNSEEAFELFNEIEDTGFVVNAFTFASLLSGASSIGAIGKGEQI 508

Query: 246 FGFLMKTGYFESDVCVGCALIDLFVKGFGDLELALKVFDEMPVKNSVSWTLMITRFTQMG 67
              ++K+  F++++ +  ALI ++ +  GD+E A +VF+ M  +N +SWT MIT + + G
Sbjct: 509 HARILKSD-FKTNLHISNALISMYSR-CGDIEAAFQVFNGMGDRNVISWTSMITGYAKHG 566

Query: 66  SPRDAILLFLDMV 28
               A+  F  M+
Sbjct: 567 FAVRALETFHKML 579