BLASTX nr result
ID: Rehmannia23_contig00023740
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00023740
(428 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ18298.1| hypothetical protein PRUPE_ppa022877mg, partial [... 137 1e-30
ref|XP_006446854.1| hypothetical protein CICLE_v10018065mg [Citr... 136 3e-30
ref|XP_002512787.1| pentatricopeptide repeat-containing protein,... 134 9e-30
ref|XP_002336618.1| predicted protein [Populus trichocarpa] 130 1e-28
ref|XP_006468953.1| PREDICTED: pentatricopeptide repeat-containi... 129 4e-28
gb|EXB41428.1| hypothetical protein L484_007578 [Morus notabilis] 128 9e-28
gb|EPS63217.1| hypothetical protein M569_11569 [Genlisea aurea] 124 1e-26
ref|XP_002337269.1| predicted protein [Populus trichocarpa] 123 3e-26
ref|XP_003553320.1| PREDICTED: pentatricopeptide repeat-containi... 117 1e-24
ref|XP_003548483.1| PREDICTED: pentatricopeptide repeat-containi... 117 1e-24
ref|XP_006291116.1| hypothetical protein CARUB_v10017228mg [Caps... 115 6e-24
gb|ESW33780.1| hypothetical protein PHAVU_001G097900g [Phaseolus... 114 1e-23
ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226... 114 2e-23
ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212... 114 2e-23
ref|XP_003624556.1| Pentatricopeptide repeat-containing protein ... 112 7e-23
ref|XP_002876985.1| pentatricopeptide repeat-containing protein ... 110 2e-22
ref|NP_189297.1| pentatricopeptide repeat-containing protein [Ar... 109 4e-22
ref|XP_002889462.1| pentatricopeptide repeat-containing protein ... 107 2e-21
ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containi... 106 3e-21
ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containi... 106 3e-21
>gb|EMJ18298.1| hypothetical protein PRUPE_ppa022877mg, partial [Prunus persica]
Length = 347
Score = 137 bits (346), Expect = 1e-30
Identities = 65/102 (63%), Positives = 80/102 (78%)
Frame = +1
Query: 4 AKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITFTGILRACLQ 183
A+RVF++M IKS+ATWNAMITSLGVHG EEALA F +ME++N++PDAITF G+L ACL
Sbjct: 237 ARRVFDEMRIKSLATWNAMITSLGVHGFGEEALALFAEMEKVNVRPDAITFVGVLSACLH 296
Query: 184 TGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRVAKLLD 309
T N+E G YF YM +HYGI P EHY C+ +YSR A +LD
Sbjct: 297 TNNLEAGCMYFKYMSKHYGITPILEHYTCMIELYSR-ADMLD 337
>ref|XP_006446854.1| hypothetical protein CICLE_v10018065mg [Citrus clementina]
gi|557549465|gb|ESR60094.1| hypothetical protein
CICLE_v10018065mg [Citrus clementina]
Length = 438
Score = 136 bits (342), Expect = 3e-30
Identities = 64/107 (59%), Positives = 81/107 (75%)
Frame = +1
Query: 4 AKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITFTGILRACLQ 183
A++VF+KMEIK++ATWN+MITSLGVHG EEALA F ME N++PDAITF G+L AC+
Sbjct: 314 ARKVFDKMEIKNLATWNSMITSLGVHGHGEEALALFAQMENANVQPDAITFVGVLCACVH 373
Query: 184 TGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRVAKLLDPKSSD 324
T N+ +G +YF YM EHYGI P EHY CL +Y+R AK+ D S +
Sbjct: 374 TNNVNEGYRYFRYMREHYGISPIEEHYTCLIELYNR-AKMKDEVSEE 419
Score = 56.6 bits (135), Expect = 3e-06
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Frame = +1
Query: 4 AKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITFTGILRACLQ 183
A+RVFE+M+ ++V +W AMI + + R EA F+ M N++P+ T +L+AC +
Sbjct: 213 ARRVFEQMQTRNVVSWTAMINAYVRNERAHEAFELFQRMLLDNVRPNEFTLVSLLQACTE 272
Query: 184 TGNIEKGRKYFYYMIEHYGIKPSFEHYV----CLFVMYSRVAKLLDPK 315
G+++ G I + +K F V L MYS+ L D +
Sbjct: 273 LGSLKLGN-----WIHDFALKNGFVLGVYLGTALIDMYSKCGSLEDAR 315
>ref|XP_002512787.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223547798|gb|EEF49290.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 480
Score = 134 bits (338), Expect = 9e-30
Identities = 61/100 (61%), Positives = 76/100 (76%)
Frame = +1
Query: 4 AKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITFTGILRACLQ 183
AK+VFE+M+ KS+ATWN+MITSLGVHG +EALA F ME N++PDAITF G+L AC+
Sbjct: 316 AKKVFEEMQKKSLATWNSMITSLGVHGFGKEALALFAQMEEANVRPDAITFVGVLFACVN 375
Query: 184 TGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRVAKL 303
T N+E G +YF YM EHYGI P EHY C+ +Y+R A L
Sbjct: 376 TNNVEAGYRYFKYMTEHYGITPMLEHYTCMIELYTRAAML 415
Score = 69.3 bits (168), Expect = 5e-10
Identities = 35/104 (33%), Positives = 58/104 (55%)
Frame = +1
Query: 4 AKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITFTGILRACLQ 183
A+ F++M +++V +W AMI + R +EA F+ M+ N++P+ T G+LRAC +
Sbjct: 215 ARAAFDEMPMRNVVSWTAMINGYVKNQRPQEAFELFQRMQLANVRPNGFTLVGLLRACTE 274
Query: 184 TGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRVAKLLDPK 315
G++E GR+ Y +E+ G K L MYS+ + D K
Sbjct: 275 LGSLELGRRIHEYALEN-GFKVGVFLGTALIDMYSKCGSIEDAK 317
>ref|XP_002336618.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 130 bits (328), Expect = 1e-28
Identities = 63/102 (61%), Positives = 77/102 (75%)
Frame = +1
Query: 4 AKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITFTGILRACLQ 183
A++VF +M+IKS+ATWNAMITSLGVHG EEAL+ F ME N++PDAITF G+L ACLQ
Sbjct: 11 ARQVFREMQIKSLATWNAMITSLGVHGYGEEALSLFTKMEEANVRPDAITFVGVLCACLQ 70
Query: 184 TGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRVAKLLD 309
T + +G YF YM EHYGI P EHY C+ +YSR A LL+
Sbjct: 71 TDKVREGDMYFKYMREHYGITPVVEHYTCMIELYSR-ANLLN 111
>ref|XP_006468953.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
chloroplastic-like isoform X1 [Citrus sinensis]
gi|568829286|ref|XP_006468954.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g26630,
chloroplastic-like isoform X2 [Citrus sinensis]
gi|568829288|ref|XP_006468955.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g26630,
chloroplastic-like isoform X3 [Citrus sinensis]
Length = 435
Score = 129 bits (324), Expect = 4e-28
Identities = 62/105 (59%), Positives = 76/105 (72%)
Frame = +1
Query: 4 AKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITFTGILRACLQ 183
A++VF+KMEIK++ATWN+MITSLGVHG EEALA F ME N+ PDAITF G+L AC+
Sbjct: 314 ARKVFDKMEIKNLATWNSMITSLGVHGHGEEALALFAQMENANVHPDAITFVGVLCACVH 373
Query: 184 TGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRVAKLLDPKS 318
N+ +G YF YM EHYGI P EHY CL +Y+ AK+ D S
Sbjct: 374 ENNVNEGYSYFRYMREHYGISPIEEHYTCLIELYN-CAKMKDEVS 417
>gb|EXB41428.1| hypothetical protein L484_007578 [Morus notabilis]
Length = 428
Score = 128 bits (321), Expect = 9e-28
Identities = 60/100 (60%), Positives = 74/100 (74%)
Frame = +1
Query: 4 AKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITFTGILRACLQ 183
A+RVF+KM+ KS+ATWN+MITSLGVHG EEALA F +MER N++PD ITF GIL ACLQ
Sbjct: 307 ARRVFDKMQAKSIATWNSMITSLGVHGFGEEALALFAEMERQNVRPDEITFVGILSACLQ 366
Query: 184 TGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRVAKL 303
++ RKYF YM + Y I P EHY+C+ +YSR L
Sbjct: 367 KNSVSDCRKYFEYMNKRYRILPIKEHYICMIELYSRAGML 406
>gb|EPS63217.1| hypothetical protein M569_11569 [Genlisea aurea]
Length = 417
Score = 124 bits (311), Expect = 1e-26
Identities = 63/93 (67%), Positives = 73/93 (78%), Gaps = 2/93 (2%)
Frame = +1
Query: 1 YAKRVFEKMEIKS-VATWNAMITSLGVHGRYEEALAYFEDMERM-NIKPDAITFTGILRA 174
+AKRVFE ME +S ATWNAMITSLG+HG EEAL+ FE+MER NI+PDA T TG+L A
Sbjct: 317 HAKRVFEGMEERSSAATWNAMITSLGIHGNGEEALSLFEEMERTTNIEPDAFTLTGVLAA 376
Query: 175 CLQTGNIEKGRKYFYYMIEHYGIKPSFEHYVCL 273
CLQT N+EKG KYFY+MI YGI+P EHY L
Sbjct: 377 CLQTNNVEKGIKYFYHMINRYGIEPVPEHYTYL 409
>ref|XP_002337269.1| predicted protein [Populus trichocarpa]
Length = 161
Score = 123 bits (308), Expect = 3e-26
Identities = 59/95 (62%), Positives = 71/95 (74%)
Frame = +1
Query: 25 MEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITFTGILRACLQTGNIEKG 204
M+IKS+ATWNAMITSLGVHG EEAL+ F ME N++PDAITF G++ ACLQT + +G
Sbjct: 1 MQIKSLATWNAMITSLGVHGYGEEALSLFTKMEEANVRPDAITFVGVICACLQTDKVREG 60
Query: 205 RKYFYYMIEHYGIKPSFEHYVCLFVMYSRVAKLLD 309
YF YM EHYGI P EHY C+ +YSR A LL+
Sbjct: 61 DMYFKYMREHYGITPVVEHYTCMIELYSR-ANLLN 94
>ref|XP_003553320.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
chloroplastic-like [Glycine max]
Length = 474
Score = 117 bits (294), Expect = 1e-24
Identities = 52/100 (52%), Positives = 73/100 (73%)
Frame = +1
Query: 4 AKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITFTGILRACLQ 183
A+ VF+ M+++++ATWN MITSLGVHG +EAL+ FE+ME+ N PDAITF G+L AC+
Sbjct: 308 ARTVFDMMQMRTLATWNTMITSLGVHGYRDEALSIFEEMEKANEVPDAITFVGVLSACVY 367
Query: 184 TGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRVAKL 303
++E +KYF M +HYGI P EHY C+ +++R KL
Sbjct: 368 MNDLELAQKYFNLMTDHYGITPILEHYTCMVEIHTRAIKL 407
Score = 58.2 bits (139), Expect = 1e-06
Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 4/109 (3%)
Frame = +1
Query: 4 AKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITFTGILRACLQ 183
A+ +FE+M K+V +W A+I H + EA FE M+ N++P+ T ++RAC +
Sbjct: 207 ARELFEQMPSKNVVSWTAIIDGYVKHKQPIEAFDLFERMQADNVRPNEYTLVSLVRACTE 266
Query: 184 TGNIEKGRKYFYYMIEHYGIKPSFEHY----VCLFVMYSRVAKLLDPKS 318
G+++ GR+ + + +K FE L MYS+ L D ++
Sbjct: 267 MGSLKLGRR-----VHDFALKNGFELEPFLGTALIDMYSKCGNLDDART 310
>ref|XP_003548483.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
chloroplastic-like isoform X1 [Glycine max]
gi|571525647|ref|XP_006598987.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g26630,
chloroplastic-like isoform X2 [Glycine max]
Length = 483
Score = 117 bits (294), Expect = 1e-24
Identities = 51/100 (51%), Positives = 73/100 (73%)
Frame = +1
Query: 4 AKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITFTGILRACLQ 183
A+ VF+ M+++++ATWN MITSLGVHG +EAL+ F++ME+ N PDAITF G+L AC+
Sbjct: 310 ARTVFDMMQVRTLATWNTMITSLGVHGYRDEALSLFDEMEKANEVPDAITFVGVLSACVY 369
Query: 184 TGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRVAKL 303
++E +KYF M +HYGI P EHY C+ +Y+R +L
Sbjct: 370 MNDLELAQKYFNLMTDHYGITPILEHYTCMVEIYTRAIEL 409
Score = 56.6 bits (135), Expect = 3e-06
Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Frame = +1
Query: 4 AKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERM-NIKPDAITFTGILRACL 180
A+ +FE+M K+V +W AMI H + EA FE M+++ N++P+ T ++RAC
Sbjct: 208 ARELFEQMPSKNVVSWTAMIDGYVKHKQPIEAFNLFERMQQVDNVRPNEYTLVSLVRACT 267
Query: 181 QTGNIEKGRKYFYYMIEHYGIKPSFEHY----VCLFVMYSRVAKLLDPKS 318
+ G+++ GR+ + + +K FE L MYS+ L D ++
Sbjct: 268 EMGSLKLGRR-----VHDFALKNGFELEPFLGTALIDMYSKCGYLDDART 312
>ref|XP_006291116.1| hypothetical protein CARUB_v10017228mg [Capsella rubella]
gi|482559823|gb|EOA24014.1| hypothetical protein
CARUB_v10017228mg [Capsella rubella]
Length = 454
Score = 115 bits (288), Expect = 6e-24
Identities = 58/114 (50%), Positives = 78/114 (68%), Gaps = 7/114 (6%)
Frame = +1
Query: 4 AKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMER-MNIKPDAITFTGILRACL 180
A++VF+ M+ KS+ATWN+MITSLGVHG EEAL F+DME +++PDAITF G+L AC
Sbjct: 304 ARKVFDVMQSKSLATWNSMITSLGVHGCGEEALCLFDDMEEEASVEPDAITFVGVLSACA 363
Query: 181 QTGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSR------VAKLLDPKSSD 324
TGN++ G KYF +MI+ YGI P EH C+ + + V+ L+D SD
Sbjct: 364 NTGNVKDGLKYFTWMIQVYGISPIREHNACMIQLLEKALEEYEVSSLVDSMDSD 417
>gb|ESW33780.1| hypothetical protein PHAVU_001G097900g [Phaseolus vulgaris]
Length = 482
Score = 114 bits (286), Expect = 1e-23
Identities = 49/100 (49%), Positives = 72/100 (72%)
Frame = +1
Query: 4 AKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITFTGILRACLQ 183
A++VF+ M+++++ATWN MITSLGVHG +EA++ FE+M + N PDAITF G+L AC+
Sbjct: 308 ARKVFDLMQVRTLATWNTMITSLGVHGFRDEAISLFEEMVKANEVPDAITFVGVLSACIY 367
Query: 184 TGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRVAKL 303
+ + +KYF M +HYGI P EHY C+ +Y+R +L
Sbjct: 368 VNDTQLAQKYFNLMTDHYGITPILEHYTCMVEIYTRAVEL 407
Score = 56.2 bits (134), Expect = 4e-06
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Frame = +1
Query: 4 AKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITFTGILRACLQ 183
A+++FEKM K+V +W AMI H R EA FE M +++P+ T ++RAC +
Sbjct: 207 ARKLFEKMPSKNVVSWTAMIDGYVKHERPIEAFNLFERMLVDDVRPNEYTVVSLVRACTE 266
Query: 184 TGNIEKGRKYFYYMIE-HYGIKPSFEHYVCLFVMYSRVAKL 303
G+++ GR+ ++++ ++ + P L MYS+ L
Sbjct: 267 MGSLKLGRRIHDFVLKNNFDLGPFLG--TALIDMYSKCGSL 305
>ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 114 bits (284), Expect = 2e-23
Identities = 54/96 (56%), Positives = 69/96 (71%)
Frame = +1
Query: 4 AKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITFTGILRACLQ 183
A VFE M KS+ TWN+MITSLGVHG +EAL F +MER+N+KPDAITF G+L AC+
Sbjct: 311 AIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVH 370
Query: 184 TGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSR 291
N+++G YF M +HYGI P EHY C+ +Y+R
Sbjct: 371 IKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYAR 406
Score = 89.0 bits (219), Expect = 6e-16
Identities = 41/100 (41%), Positives = 60/100 (60%)
Frame = +1
Query: 4 AKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITFTGILRACLQ 183
AK+ F++M+ K+V +W AM+ G+HGR +EAL F M R +KP+ ITF +L AC
Sbjct: 1407 AKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSH 1466
Query: 184 TGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRVAKL 303
G +E+G +F M Y I+P EHY C+ ++ R L
Sbjct: 1467 AGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCL 1506
>ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 114 bits (284), Expect = 2e-23
Identities = 54/96 (56%), Positives = 69/96 (71%)
Frame = +1
Query: 4 AKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITFTGILRACLQ 183
A VFE M KS+ TWN+MITSLGVHG +EAL F +MER+N+KPDAITF G+L AC+
Sbjct: 311 AIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVH 370
Query: 184 TGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSR 291
N+++G YF M +HYGI P EHY C+ +Y+R
Sbjct: 371 IKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYAR 406
Score = 89.0 bits (219), Expect = 6e-16
Identities = 41/100 (41%), Positives = 60/100 (60%)
Frame = +1
Query: 4 AKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITFTGILRACLQ 183
AK+ F++M+ K+V +W AM+ G+HGR +EAL F M R +KP+ ITF +L AC
Sbjct: 2280 AKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSH 2339
Query: 184 TGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRVAKL 303
G +E+G +F M Y I+P EHY C+ ++ R L
Sbjct: 2340 AGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCL 2379
>ref|XP_003624556.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499571|gb|AES80774.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 476
Score = 112 bits (279), Expect = 7e-23
Identities = 49/100 (49%), Positives = 69/100 (69%)
Frame = +1
Query: 4 AKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITFTGILRACLQ 183
A +VF ME++++ATWN M+TS GVHG E L F++ME+ + PDAITF G+L AC+Q
Sbjct: 305 AVKVFGLMEVRNLATWNTMLTSFGVHGFGNEVLDLFKEMEKAGVVPDAITFVGVLSACVQ 364
Query: 184 TGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRVAKL 303
++E G+KYF M EHY + P EHY C+ +Y+R +L
Sbjct: 365 INDLELGQKYFSLMTEHYSLTPILEHYTCMVGLYTRANEL 404
>ref|XP_002876985.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297322823|gb|EFH53244.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 451
Score = 110 bits (274), Expect = 2e-22
Identities = 55/108 (50%), Positives = 76/108 (70%), Gaps = 1/108 (0%)
Frame = +1
Query: 4 AKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMER-MNIKPDAITFTGILRACL 180
A++VF+ M+ KS+ATWN+MITSLGVHG EEAL FE+ME +++PDAITF G+L AC
Sbjct: 304 ARKVFDVMQSKSLATWNSMITSLGVHGCGEEALYLFEEMEEEASVEPDAITFVGVLSACA 363
Query: 181 QTGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRVAKLLDPKSSD 324
TGN++ G +YF MI+ YGI P EH C+ + + ++ K+SD
Sbjct: 364 NTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEM--EKASD 409
>ref|NP_189297.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75275188|sp|Q38959.1|PP257_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g26630, chloroplastic; Flags: Precursor
gi|1402883|emb|CAA66814.1| hypothetical protein
[Arabidopsis thaliana] gi|1495263|emb|CAA66119.1| orf09
[Arabidopsis thaliana] gi|11994298|dbj|BAB01728.1|
unnamed protein product [Arabidopsis thaliana]
gi|20466384|gb|AAM20509.1| unknown protein [Arabidopsis
thaliana] gi|23198064|gb|AAN15559.1| unknown protein
[Arabidopsis thaliana] gi|332643668|gb|AEE77189.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 455
Score = 109 bits (272), Expect = 4e-22
Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 1/101 (0%)
Frame = +1
Query: 4 AKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMER-MNIKPDAITFTGILRACL 180
A++VF+ M+ KS+ATWN+MITSLGVHG EEAL+ FE+ME +++PDAITF G+L AC
Sbjct: 305 ARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACA 364
Query: 181 QTGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRVAKL 303
TGN++ G +YF MI+ YGI P EH C+ + + ++
Sbjct: 365 NTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEV 405
>ref|XP_002889462.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297335304|gb|EFH65721.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 608
Score = 107 bits (266), Expect = 2e-21
Identities = 47/97 (48%), Positives = 67/97 (69%)
Frame = +1
Query: 1 YAKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITFTGILRACL 180
YA RV+ KM ++++ TWNAM+++L +GR EEA+++F DM + IKPD I+F +L AC
Sbjct: 414 YASRVYSKMSVRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAVLTACG 473
Query: 181 QTGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSR 291
TG +E+GR YF M + YGIKP EHY C+ + R
Sbjct: 474 HTGLVEEGRNYFALMAKSYGIKPGTEHYSCMIDLLGR 510
>ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 106 bits (265), Expect = 3e-21
Identities = 50/100 (50%), Positives = 64/100 (64%)
Frame = +1
Query: 4 AKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITFTGILRACLQ 183
A R+F+ ME ++V +W+AMI L HGR E+ALA F M +KP+A+TF GIL AC
Sbjct: 299 ACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSH 358
Query: 184 TGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRVAKL 303
G +EKGRKYF M YGI P EHY C+ ++SR L
Sbjct: 359 MGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLL 398
>ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 106 bits (265), Expect = 3e-21
Identities = 50/100 (50%), Positives = 64/100 (64%)
Frame = +1
Query: 4 AKRVFEKMEIKSVATWNAMITSLGVHGRYEEALAYFEDMERMNIKPDAITFTGILRACLQ 183
A R+F+ ME ++V +W+AMI L HGR E+ALA F M +KP+A+TF GIL AC
Sbjct: 299 ACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSH 358
Query: 184 TGNIEKGRKYFYYMIEHYGIKPSFEHYVCLFVMYSRVAKL 303
G +EKGRKYF M YGI P EHY C+ ++SR L
Sbjct: 359 MGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLL 398