BLASTX nr result
ID: Rehmannia23_contig00023709
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00023709
(1427 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004496322.1| PREDICTED: RNA pseudourine synthase 5-like [... 520 e-145
ref|XP_003556222.1| PREDICTED: RNA pseudouridine synthase 5-like... 513 e-143
ref|XP_003591952.1| RNA pseudourine synthase [Medicago truncatul... 510 e-142
gb|ESW15679.1| hypothetical protein PHAVU_007G093000g [Phaseolus... 508 e-141
gb|EOY18594.1| Pseudouridine synthase family protein [Theobroma ... 507 e-141
gb|EXB80105.1| RNA pseudourine synthase 5 [Morus notabilis] 503 e-140
ref|XP_004307403.1| PREDICTED: RNA pseudourine synthase 5-like [... 502 e-139
ref|XP_006485880.1| PREDICTED: RNA pseudouridine synthase 5-like... 501 e-139
ref|XP_004233537.1| PREDICTED: RNA pseudourine synthase 5-like [... 501 e-139
emb|CBI31488.3| unnamed protein product [Vitis vinifera] 500 e-139
ref|XP_002312025.1| hypothetical protein POPTR_0008s04160g [Popu... 500 e-139
ref|XP_002276664.1| PREDICTED: RNA pseudourine synthase 5-like [... 498 e-138
ref|XP_006485879.1| PREDICTED: RNA pseudouridine synthase 5-like... 497 e-138
ref|XP_006346977.1| PREDICTED: RNA pseudouridine synthase 5-like... 496 e-138
ref|XP_004143830.1| PREDICTED: RNA pseudourine synthase 5-like [... 492 e-136
ref|XP_004157313.1| PREDICTED: RNA pseudourine synthase 5-like [... 491 e-136
ref|XP_006346975.1| PREDICTED: RNA pseudouridine synthase 5-like... 490 e-136
ref|XP_006651272.1| PREDICTED: RNA pseudouridine synthase 5-like... 468 e-129
sp|Q0DST9.2|PUS5_ORYSJ RecName: Full=RNA pseudouridine synthase ... 464 e-128
ref|XP_006403820.1| hypothetical protein EUTSA_v10010446mg [Eutr... 462 e-127
>ref|XP_004496322.1| PREDICTED: RNA pseudourine synthase 5-like [Cicer arietinum]
Length = 368
Score = 520 bits (1338), Expect = e-145
Identities = 253/364 (69%), Positives = 300/364 (82%), Gaps = 1/364 (0%)
Frame = +2
Query: 128 TKMVSFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITI 307
++ G PWPE NDG+ Y D++RPSDAG TLI+FYS KYKSSAPL GWLQRI + QIT+
Sbjct: 2 SRQKKIGVPWPELNDGLSYNDVVRPSDAGLTLIEFYSTKYKSSAPLQGWLQRIKSDQITV 61
Query: 308 DGCVVTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLF 487
D VVTDP +LR G +LVYHRLPWKEPDAP+ +++LYED+D+IALNKPSGLQVLPGGLF
Sbjct: 62 DAKVVTDPNTLLRAGSKLVYHRLPWKEPDAPHTIQVLYEDDDIIALNKPSGLQVLPGGLF 121
Query: 488 QQRTVLTQLQRHADN-LTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADG 664
QQRTVLTQLQ +N T +Q+PHPVPVHRLGRGTSG+LLCAKTK+A+ LA++FADG
Sbjct: 122 QQRTVLTQLQWETNNKCTFEAHQKPHPVPVHRLGRGTSGILLCAKTKLARVHLASYFADG 181
Query: 665 TSAVGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASP 844
TS +G R DT Q+ + I K+YRAL SG+I D+V IDQPIG+VKYPGVAKGLYVAS
Sbjct: 182 TSRIGGKR--DTNQELGK-IAKIYRALVSGIIDNDKVTIDQPIGMVKYPGVAKGLYVASQ 238
Query: 845 SGKPALSKVVVLERNLLSNSTLVQVEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKF 1024
SGKPALS V +LERN+ NSTLVQV+IQSGRPHQIRIHLSFIGHPL+GDPLY+ GQPK
Sbjct: 239 SGKPALSVVDILERNVKENSTLVQVKIQSGRPHQIRIHLSFIGHPLIGDPLYAVGGQPKC 298
Query: 1025 SDHESVDESFAQDGGYERPEKPVPGDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLHTV 1204
D++ +D+SFA+DGGY RP KPVPGDCGY+LHAH ++ +HP+TNEI EI APLP L T
Sbjct: 299 LDYDFLDDSFAEDGGYPRPPKPVPGDCGYYLHAHELLLTHPITNEIIEIIAPLPSILQTH 358
Query: 1205 EESK 1216
EE+K
Sbjct: 359 EEAK 362
>ref|XP_003556222.1| PREDICTED: RNA pseudouridine synthase 5-like [Glycine max]
Length = 371
Score = 513 bits (1322), Expect = e-143
Identities = 254/364 (69%), Positives = 300/364 (82%), Gaps = 1/364 (0%)
Frame = +2
Query: 128 TKMVSFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITI 307
T FG PWPE NDG+ Y D++R SDAGATLI+FYS KYKSSAPL GWLQRI + QIT+
Sbjct: 2 TSRKKFGIPWPECNDGLSYDDVVRASDAGATLIEFYSTKYKSSAPLQGWLQRIKSGQITV 61
Query: 308 DGCVVTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLF 487
DG VVTD +LR G +L+YHRLPWKEPDAP+++++LYED+D+IALNKPSGLQVLPGGL+
Sbjct: 62 DGGVVTDSNTVLRVGSKLIYHRLPWKEPDAPHMIDVLYEDDDMIALNKPSGLQVLPGGLY 121
Query: 488 QQRTVLTQLQRHADNL-TASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADG 664
QQRT+LTQLQ A+N T ++ HPVPVHRLGRGTSG+LLCAKTK+A++RLA+ FADG
Sbjct: 122 QQRTILTQLQWEANNQGTCEMHKRLHPVPVHRLGRGTSGILLCAKTKLARARLASHFADG 181
Query: 665 TSAVGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASP 844
TS VG R DT+Q+ + I K+YRAL SG++ D+V I+QPIG+VKYPGVAKGLYVAS
Sbjct: 182 TSHVGGKR--DTKQELGK-IAKMYRALVSGIVENDKVTINQPIGIVKYPGVAKGLYVASE 238
Query: 845 SGKPALSKVVVLERNLLSNSTLVQVEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKF 1024
SGKPALS V +LE N+ NSTLVQV+IQSGRPHQIRIHLSFIGHPL+GDPLY GQPK
Sbjct: 239 SGKPALSVVDILETNIQENSTLVQVKIQSGRPHQIRIHLSFIGHPLLGDPLYGVGGQPKC 298
Query: 1025 SDHESVDESFAQDGGYERPEKPVPGDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLHTV 1204
D + VDESFA+DGGY+RP KPVPGDCGY+LHAH +V SHP TNE+ EI APLP LHT
Sbjct: 299 LDCDFVDESFAEDGGYQRPTKPVPGDCGYYLHAHKLVLSHPTTNELIEIIAPLPSALHTA 358
Query: 1205 EESK 1216
EE+K
Sbjct: 359 EEAK 362
>ref|XP_003591952.1| RNA pseudourine synthase [Medicago truncatula]
gi|358349060|ref|XP_003638558.1| RNA pseudourine synthase
[Medicago truncatula] gi|355481000|gb|AES62203.1| RNA
pseudourine synthase [Medicago truncatula]
gi|355504493|gb|AES85696.1| RNA pseudourine synthase
[Medicago truncatula]
Length = 371
Score = 510 bits (1313), Expect = e-142
Identities = 256/362 (70%), Positives = 296/362 (81%), Gaps = 3/362 (0%)
Frame = +2
Query: 146 GEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVVT 325
G PWPEFNDG+ Y D++RPSDAG TLI+FYS KYKSSAPL GWLQRI + QIT+D VVT
Sbjct: 8 GIPWPEFNDGLSYDDVVRPSDAGLTLIEFYSTKYKSSAPLQGWLQRIKSDQITLDARVVT 67
Query: 326 DPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTVL 505
DP ILR G +LVYHR+PWKEPDAP+ +E+LYED+D+IALNKPSGLQVLPGGLFQQRTVL
Sbjct: 68 DPNTILRVGSKLVYHRIPWKEPDAPHTIEVLYEDDDIIALNKPSGLQVLPGGLFQQRTVL 127
Query: 506 TQLQRHADN-LTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAV-G 679
TQLQ +N T +Q+PHPVPVHRLGRGTSG+LLCAKTK+A++RLA++FADGTS + G
Sbjct: 128 TQLQWETNNKSTIEAHQKPHPVPVHRLGRGTSGILLCAKTKLARARLASYFADGTSRIEG 187
Query: 680 VCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKPA 859
N K I K+YRAL SG+I D+V I+QPIG+VKYPGVAKGLYVAS SGKPA
Sbjct: 188 KGHTNQELGK----IAKIYRALVSGIINNDQVTINQPIGMVKYPGVAKGLYVASQSGKPA 243
Query: 860 LSKVVVLERNLLSNSTLVQ-VEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHE 1036
LS V VLERN+ NSTLVQ V+IQSGRPHQIRIHLSFIGHPL+GDPLY+ GQPK D +
Sbjct: 244 LSVVHVLERNVKENSTLVQVVKIQSGRPHQIRIHLSFIGHPLLGDPLYAVGGQPKCLDCD 303
Query: 1037 SVDESFAQDGGYERPEKPVPGDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLHTVEESK 1216
+DESFA+DGGY RP KPVPGDCGYHLHAH + SHP+TNEI E+ APLP L T EE+
Sbjct: 304 FLDESFAEDGGYTRPSKPVPGDCGYHLHAHRLFLSHPITNEIIEMIAPLPSILQTHEEAI 363
Query: 1217 AK 1222
A+
Sbjct: 364 AQ 365
>gb|ESW15679.1| hypothetical protein PHAVU_007G093000g [Phaseolus vulgaris]
Length = 365
Score = 508 bits (1309), Expect = e-141
Identities = 254/358 (70%), Positives = 299/358 (83%)
Frame = +2
Query: 143 FGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVV 322
FG PWPE NDG+ Y D++R SD+G TLI+FY KYKSSAPL GWLQRI + QIT DG VV
Sbjct: 7 FGIPWPECNDGLSYDDVVRSSDSGLTLIEFYFTKYKSSAPLQGWLQRIKSGQITFDGRVV 66
Query: 323 TDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTV 502
TD +LR G +LVYHRLPWKEPDAP+++E+LYED+++IALNKPSGLQVLPGGLFQQRTV
Sbjct: 67 TDSSTVLRVGSKLVYHRLPWKEPDAPHMIEVLYEDDEMIALNKPSGLQVLPGGLFQQRTV 126
Query: 503 LTQLQRHADNLTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAVGV 682
LTQLQ A NL +++PHPVPVHRLGRGTSG+LLCAKTK+A++RLA++FADGTS +G
Sbjct: 127 LTQLQWEA-NL----HKKPHPVPVHRLGRGTSGILLCAKTKLARARLASYFADGTSHIGG 181
Query: 683 CRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKPAL 862
R DT + + I K+YR LASG++ DEV I+QPIG+VKYPGVAKGLYVAS SGKPAL
Sbjct: 182 KR--DTNGEIGK-IAKIYRGLASGIVENDEVTINQPIGVVKYPGVAKGLYVASQSGKPAL 238
Query: 863 SKVVVLERNLLSNSTLVQVEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESV 1042
S V +LERN+ NSTLVQV+IQSGRPHQIRIHLSFIGHPL+GDPLY GQPK D +S+
Sbjct: 239 SVVGILERNVQENSTLVQVKIQSGRPHQIRIHLSFIGHPLLGDPLYGDGGQPKCLDCDSI 298
Query: 1043 DESFAQDGGYERPEKPVPGDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLHTVEESK 1216
DESFA+DGGY+RP KPVPGDCGY+LHAH +V SHPLTNE+ EI+APLP L T EE+K
Sbjct: 299 DESFAEDGGYQRPTKPVPGDCGYNLHAHKLVLSHPLTNELIEITAPLPSVLQTPEEAK 356
>gb|EOY18594.1| Pseudouridine synthase family protein [Theobroma cacao]
Length = 378
Score = 507 bits (1306), Expect = e-141
Identities = 247/367 (67%), Positives = 294/367 (80%), Gaps = 1/367 (0%)
Frame = +2
Query: 128 TKMVSFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITI 307
T+ + FG PWPE NDG++Y D+++PSD+ TLI+FYS KYK+SAP GWLQRI N QI++
Sbjct: 7 TQSLVFGLPWPELNDGLFYDDVIKPSDSELTLIEFYSSKYKNSAPSQGWLQRIQNGQISV 66
Query: 308 DGCVVTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLF 487
DG VV DP ILRG ELVYHRLPWKEPDAP+ LE+LYED+D+IALNKPSGLQVLPGGLF
Sbjct: 67 DGRVVRDPNTILRGSSELVYHRLPWKEPDAPHALEVLYEDDDMIALNKPSGLQVLPGGLF 126
Query: 488 QQRTVLTQLQRHADNLTAS-GYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADG 664
QQRTVLTQL T+S QE HPVPVHRLGRGTSG+LLCAKTK AK+ LAA+FADG
Sbjct: 127 QQRTVLTQLSWRMRKQTSSLASQESHPVPVHRLGRGTSGILLCAKTKAAKTCLAAYFADG 186
Query: 665 TSAVGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASP 844
TS +G Q TR I+K+YRAL +G++ ED+V I+QPIG+V+YPGVAKGLYVASP
Sbjct: 187 TSLIGANSNRKMQPSCTRKISKIYRALVTGILGEDKVVINQPIGIVQYPGVAKGLYVASP 246
Query: 845 SGKPALSKVVVLERNLLSNSTLVQVEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKF 1024
SGKPALSKV VLE++ N TLVQV+I+SGRPHQIRIHLSFIGHPL+GDPLY GQP+
Sbjct: 247 SGKPALSKVEVLEKDEQQNHTLVQVQIESGRPHQIRIHLSFIGHPLLGDPLYIAGGQPRC 306
Query: 1025 SDHESVDESFAQDGGYERPEKPVPGDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLHTV 1204
D E VDE++AQDGGY+RP PVPGDCGY+LHAH ++ SHP T+EI I+APLP L T
Sbjct: 307 FDSEFVDENYAQDGGYQRPVNPVPGDCGYYLHAHRLLLSHPTTDEIINITAPLPPVLQTQ 366
Query: 1205 EESKAKK 1225
+E + +
Sbjct: 367 DEVRRSR 373
>gb|EXB80105.1| RNA pseudourine synthase 5 [Morus notabilis]
Length = 377
Score = 503 bits (1295), Expect = e-140
Identities = 251/364 (68%), Positives = 293/364 (80%), Gaps = 1/364 (0%)
Frame = +2
Query: 143 FGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVV 322
FG WPE NDG++Y D++R SD+ +TLI FYSRKYK+SAPL GWLQRI N QIT++G VV
Sbjct: 14 FGFSWPELNDGLFYSDVVRTSDSESTLIQFYSRKYKNSAPLQGWLQRIRNGQITVNGRVV 73
Query: 323 TDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTV 502
DP IL G ELVYHRLPWKEP APY+LEILYED D+IAL+KPS LQVLPGGLFQQRTV
Sbjct: 74 RDPDTILSIGSELVYHRLPWKEPGAPYILEILYEDGDMIALDKPSELQVLPGGLFQQRTV 133
Query: 503 LTQLQRHADNLTASGYQ-EPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAVG 679
LTQLQ A ++S EP+PVPVHRLGRGTSG+LLCAKTK AK++LAA+FADGTS VG
Sbjct: 134 LTQLQWRATKQSSSLVCCEPNPVPVHRLGRGTSGILLCAKTKFAKTQLAAYFADGTSYVG 193
Query: 680 VCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKPA 859
N+ + A R I K+YRAL +G++ ED+V ++QPIG V+YPGVAKGLYVASPSGKPA
Sbjct: 194 GNSKNNLELNARRKILKIYRALVTGIVCEDKVIVEQPIGTVQYPGVAKGLYVASPSGKPA 253
Query: 860 LSKVVVLERNLLSNSTLVQVEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHES 1039
LSKV VLER++ N TLV+VEIQSGRPHQIRIHLSFIGHPL+GDPLY G+P+ D E
Sbjct: 254 LSKVEVLERDVEKNCTLVKVEIQSGRPHQIRIHLSFIGHPLLGDPLYVVGGRPRCFDPEF 313
Query: 1040 VDESFAQDGGYERPEKPVPGDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLHTVEESKA 1219
VD SFAQDGG+ RP KPVPGDCGY LHAHHV SHP TNE+ EI+APLP L T +E++
Sbjct: 314 VDGSFAQDGGFPRPAKPVPGDCGYTLHAHHVSLSHPTTNEVIEITAPLPPVLWTRQEAQE 373
Query: 1220 KKVL 1231
V+
Sbjct: 374 TSVI 377
>ref|XP_004307403.1| PREDICTED: RNA pseudourine synthase 5-like [Fragaria vesca subsp.
vesca]
Length = 375
Score = 502 bits (1293), Expect = e-139
Identities = 247/358 (68%), Positives = 288/358 (80%), Gaps = 1/358 (0%)
Frame = +2
Query: 140 SFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCV 319
+FG PWP+ NDG+ Y D+++ SD+ TLI+FYS KYKSSAPL GWLQRI N QIT+DG V
Sbjct: 12 TFGLPWPDLNDGLSYNDVVKSSDSELTLIEFYSSKYKSSAPLQGWLQRIRNGQITVDGEV 71
Query: 320 VTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRT 499
V D ILR G ELVYHRLPW EPDAPYLLE+LYED+D+IALNKP GLQVLPGGLFQQRT
Sbjct: 72 VRDSDTILRVGSELVYHRLPWGEPDAPYLLEVLYEDDDMIALNKPGGLQVLPGGLFQQRT 131
Query: 500 VLTQLQ-RHADNLTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAV 676
VLTQL R + Q+ H VPVHRLGRGTSG+LLCAKTK AK++LAA+FADGTS +
Sbjct: 132 VLTQLLWRESQKFDHLACQKSHLVPVHRLGRGTSGILLCAKTKHAKTQLAAYFADGTSHI 191
Query: 677 GVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKP 856
G +T+ TR ITK+YRAL +G+I EDEV + QPIG V+YPGVAKGLY+ASP+GKP
Sbjct: 192 GDDSTTNTKLHTTRKITKIYRALVTGIICEDEVIVKQPIGTVRYPGVAKGLYIASPAGKP 251
Query: 857 ALSKVVVLERNLLSNSTLVQVEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHE 1036
ALSKV VL+R++ N T+VQVEIQSGRPHQIRIHLSFIGHPL+GDPLY GQPK +
Sbjct: 252 ALSKVEVLDRDIQKNHTIVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQPKCLGSD 311
Query: 1037 SVDESFAQDGGYERPEKPVPGDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLHTVEE 1210
VDESFA DGG++RP KPVPGDCGY+LHAH VV SHP +NE+ +I+APLPL L T EE
Sbjct: 312 LVDESFADDGGFKRPTKPVPGDCGYNLHAHQVVLSHPSSNEVIKITAPLPLVLRTREE 369
>ref|XP_006485880.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X2 [Citrus
sinensis] gi|568865018|ref|XP_006485881.1| PREDICTED: RNA
pseudouridine synthase 5-like isoform X3 [Citrus
sinensis]
Length = 389
Score = 501 bits (1291), Expect = e-139
Identities = 249/375 (66%), Positives = 294/375 (78%), Gaps = 2/375 (0%)
Frame = +2
Query: 143 FGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVV 322
FGEPWP+ N+G+ Y D++ PSD+ TLI+FYS K+K+SAPL GWLQRI N QIT+DG VV
Sbjct: 13 FGEPWPQLNEGLLYNDVVSPSDSKLTLIEFYSTKHKNSAPLQGWLQRIQNGQITVDGRVV 72
Query: 323 TDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTV 502
DP IIL G ELVYHRLPWKEPD PYLLE+ YED+D+IALNKPSGLQVLPGGLFQQRTV
Sbjct: 73 NDPNIILSAGSELVYHRLPWKEPDVPYLLEVFYEDDDLIALNKPSGLQVLPGGLFQQRTV 132
Query: 503 LTQLQRHADNLTAS-GYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAVG 679
L QLQ A ++S Q HPVPVHRLGRGTSG+LLCAKTK+AK+ +AA+FAD TS V
Sbjct: 133 LKQLQWRASKQSSSLSSQASHPVPVHRLGRGTSGILLCAKTKLAKTCIAAYFADKTSVVD 192
Query: 680 VCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKPA 859
N + + R ITK+YRAL G++ ED+V I QPIG+V+YPGVAKGLYVASPSGKPA
Sbjct: 193 AD--NTVMELSQRKITKIYRALVHGIVDEDKVIIKQPIGIVRYPGVAKGLYVASPSGKPA 250
Query: 860 LSKVVVLERNLLSNSTLVQVEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHES 1039
LSKV VLER++ N TLVQVEIQSGRPHQIRIHL+F+GHPL+GDPLY GQPK D E
Sbjct: 251 LSKVDVLERDVQRNCTLVQVEIQSGRPHQIRIHLAFLGHPLLGDPLYVAGGQPKSFDSEF 310
Query: 1040 VDESFAQDGGYERPEKPVPGDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLHTVEESK- 1216
D +FAQDGGYERP PVPGDCGY+LHA+ + SHP TNE+ +I+APLP L T EE +
Sbjct: 311 ADGTFAQDGGYERPVNPVPGDCGYYLHAYQLFLSHPTTNEVIKITAPLPSVLKTREEGRE 370
Query: 1217 AKKVL*EQRLAGVSI 1261
K + +R+ G+ I
Sbjct: 371 VDKSVGSERIRGIHI 385
>ref|XP_004233537.1| PREDICTED: RNA pseudourine synthase 5-like [Solanum lycopersicum]
Length = 402
Score = 501 bits (1290), Expect = e-139
Identities = 249/363 (68%), Positives = 293/363 (80%), Gaps = 2/363 (0%)
Frame = +2
Query: 143 FGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVV 322
FG PWP+ N+G+ Y D++RP+DAG TLI+FY RKYK+SAPL GWLQRI NKQITIDG VV
Sbjct: 37 FGVPWPQRNEGLSYHDIVRPTDAGLTLIEFYFRKYKNSAPLQGWLQRIQNKQITIDGKVV 96
Query: 323 TDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTV 502
P LR G ELVYHRLPW+EPDAPYLLE+L+ED+ +I +NKPSGLQVLPGGL+QQRTV
Sbjct: 97 ILPDTELRAGAELVYHRLPWREPDAPYLLEVLFEDDYLIVVNKPSGLQVLPGGLYQQRTV 156
Query: 503 LTQLQRHADNLT--ASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAV 676
LTQLQ HA LT +SG Q+ HPVPVHRLGRGTSG+LLCAKTK+ KSRLAA+FA+GTS V
Sbjct: 157 LTQLQWHACKLTTTSSGCQKTHPVPVHRLGRGTSGILLCAKTKLCKSRLAAYFAEGTSVV 216
Query: 677 GVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKP 856
+ +++ R I K+YRAL SGV+ DE I QPIG +KYPGVAKGLYVASPSGKP
Sbjct: 217 EE-KCTNSECNTMRKICKIYRALVSGVMDMDEAVIKQPIGTIKYPGVAKGLYVASPSGKP 275
Query: 857 ALSKVVVLERNLLSNSTLVQVEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHE 1036
ALS V VLER+ SN TLVQVEIQSGRPHQIRIHLSFIG+PL+GDPLY + GQPK E
Sbjct: 276 ALSSVRVLERDSESNCTLVQVEIQSGRPHQIRIHLSFIGYPLIGDPLYVSGGQPKCFHPE 335
Query: 1037 SVDESFAQDGGYERPEKPVPGDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLHTVEESK 1216
+DESF +DGGY+RPE PVPGDCGY+LHAH + HP+TNE+ +I+APLP L T +E +
Sbjct: 336 LLDESFEKDGGYQRPENPVPGDCGYNLHAHQIGLIHPITNELIKITAPLPAILQTRDERE 395
Query: 1217 AKK 1225
A +
Sbjct: 396 ANQ 398
>emb|CBI31488.3| unnamed protein product [Vitis vinifera]
Length = 347
Score = 500 bits (1287), Expect = e-139
Identities = 241/341 (70%), Positives = 284/341 (83%), Gaps = 1/341 (0%)
Frame = +2
Query: 140 SFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCV 319
+FG PWP+FNDG+ Y D++ SD+ TLID+YS K+K+SAPL GWLQRI+ QIT+DG V
Sbjct: 4 TFGVPWPDFNDGLTYNDVVSASDSELTLIDYYSSKHKNSAPLQGWLQRINKGQITVDGTV 63
Query: 320 VTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRT 499
VT+PK ILR G +LVYHRLPW+EPDAPYLLEILYED+DVIALNKPSGLQVLPGGLFQQRT
Sbjct: 64 VTEPKTILRAGSKLVYHRLPWQEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQRT 123
Query: 500 VLTQLQRHADNLTA-SGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAV 676
VLTQLQ A+ + QE H VPVHRLGRGTSG+LLCAKTK+AK+RLAA+FADGTS V
Sbjct: 124 VLTQLQWRANKQNSLPACQESHSVPVHRLGRGTSGILLCAKTKLAKTRLAAYFADGTSVV 183
Query: 677 GVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKP 856
G R D + + R I+K+YRAL +G++ +DE+ I+QPIG+V+YPGVAKGLYVASPSGKP
Sbjct: 184 GGNRDADMKSRTMRKISKIYRALVNGILDKDEIVIEQPIGMVQYPGVAKGLYVASPSGKP 243
Query: 857 ALSKVVVLERNLLSNSTLVQVEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHE 1036
ALSKV +LER++ + +VQVEIQSGRPHQIRIHLSFIGHPL+GDPLY GQPK D E
Sbjct: 244 ALSKVSILERDVQGDHMIVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVPGGQPKCCDAE 303
Query: 1037 SVDESFAQDGGYERPEKPVPGDCGYHLHAHHVVFSHPLTNE 1159
+ES+A DGGY+RP KPVPGDCGYHLHAH +V SHP TNE
Sbjct: 304 FTNESYALDGGYQRPVKPVPGDCGYHLHAHQLVLSHPTTNE 344
>ref|XP_002312025.1| hypothetical protein POPTR_0008s04160g [Populus trichocarpa]
gi|222851845|gb|EEE89392.1| hypothetical protein
POPTR_0008s04160g [Populus trichocarpa]
Length = 377
Score = 500 bits (1287), Expect = e-139
Identities = 246/364 (67%), Positives = 292/364 (80%), Gaps = 3/364 (0%)
Frame = +2
Query: 134 MVSFGEPWPEFNDGIYYRDLLRPS-DAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITID 310
+ SFG PWP+ N+G++Y D++ S D+G TLI FYS KYK+SAPL GWLQRIHN QITID
Sbjct: 11 LCSFGSPWPDLNEGLFYNDVVSTSSDSGLTLIHFYSSKYKNSAPLQGWLQRIHNGQITID 70
Query: 311 GCVVTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQ 490
G VV +PK ILR G ELVYHRLPW+EPDAPYLL++LYED+D++ALNKP GLQVLPGGLFQ
Sbjct: 71 GEVVKEPKAILRDGMELVYHRLPWREPDAPYLLQVLYEDDDMVALNKPPGLQVLPGGLFQ 130
Query: 491 QRTVLTQLQRHADNLTAS-GYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGT 667
QRTVL QLQ A ++S Q HPVPVHRLGRGTSG+LLCAKTK+AK+ LAA+FADGT
Sbjct: 131 QRTVLMQLQWRASKGSSSLAIQGSHPVPVHRLGRGTSGILLCAKTKVAKTSLAAYFADGT 190
Query: 668 SAVGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPS 847
S +G + +Q R I+K+YRAL +G++ +D++ I QPIG ++YPGVAKGLYVASPS
Sbjct: 191 SLIGDSSNANMEQSKRRKISKIYRALVNGILNQDKIIIKQPIGTMRYPGVAKGLYVASPS 250
Query: 848 GKPALSKVVVLERNLLSNSTLVQVEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFS 1027
GKPALSKV VLER+ N TLVQVEI+SGRPHQIRIHLSFIGHPL+GDPLY GQP
Sbjct: 251 GKPALSKVEVLERDSQLNQTLVQVEIESGRPHQIRIHLSFIGHPLLGDPLYDVGGQPMCF 310
Query: 1028 DHESVDESFAQDGGYERPEKPVPGDCGYHLHAHHVVFSHPLTNE-INEISAPLPLNLHTV 1204
D E DESFA+DGGYERP KPVPGDCGY+LHAH +V SHP NE + +I+APLP L T
Sbjct: 311 DSEHEDESFAEDGGYERPAKPVPGDCGYYLHAHQLVLSHPTKNEQVIKITAPLPSILRTQ 370
Query: 1205 EESK 1216
E++
Sbjct: 371 AETE 374
>ref|XP_002276664.1| PREDICTED: RNA pseudourine synthase 5-like [Vitis vinifera]
Length = 348
Score = 498 bits (1283), Expect = e-138
Identities = 241/342 (70%), Positives = 286/342 (83%), Gaps = 2/342 (0%)
Frame = +2
Query: 140 SFGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCV 319
+FG PWP+FNDG+ Y D++ SD+ TLID+YS K+K+SAPL GWLQRI+ QIT+DG V
Sbjct: 4 TFGVPWPDFNDGLTYNDVVSASDSELTLIDYYSSKHKNSAPLQGWLQRINKGQITVDGTV 63
Query: 320 VTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRT 499
VT+PK ILR G +LVYHRLPW+EPDAPYLLEILYED+DVIALNKPSGLQVLPGGLFQQRT
Sbjct: 64 VTEPKTILRAGSKLVYHRLPWQEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQRT 123
Query: 500 VLTQLQRHADNLTA-SGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAV 676
VLTQLQ A+ + QE H VPVHRLGRGTSG+LLCAKTK+AK+RLAA+FADGTS V
Sbjct: 124 VLTQLQWRANKQNSLPACQESHSVPVHRLGRGTSGILLCAKTKLAKTRLAAYFADGTSVV 183
Query: 677 GVCRMN-DTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGK 853
G R++ D + + R I+K+YRAL +G++ +DE+ I+QPIG+V+YPGVAKGLYVASPSGK
Sbjct: 184 GGNRLDADMKSRTMRKISKIYRALVNGILDKDEIVIEQPIGMVQYPGVAKGLYVASPSGK 243
Query: 854 PALSKVVVLERNLLSNSTLVQVEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDH 1033
PALSKV +LER++ + +VQVEIQSGRPHQIRIHLSFIGHPL+GDPLY GQPK D
Sbjct: 244 PALSKVSILERDVQGDHMIVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVPGGQPKCCDA 303
Query: 1034 ESVDESFAQDGGYERPEKPVPGDCGYHLHAHHVVFSHPLTNE 1159
E +ES+A DGGY+RP KPVPGDCGYHLHAH +V SHP TNE
Sbjct: 304 EFTNESYALDGGYQRPVKPVPGDCGYHLHAHQLVLSHPTTNE 345
>ref|XP_006485879.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X1 [Citrus
sinensis]
Length = 390
Score = 497 bits (1279), Expect = e-138
Identities = 249/376 (66%), Positives = 294/376 (78%), Gaps = 3/376 (0%)
Frame = +2
Query: 143 FGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVV 322
FGEPWP+ N+G+ Y D++ PSD+ TLI+FYS K+K+SAPL GWLQRI N QIT+DG VV
Sbjct: 13 FGEPWPQLNEGLLYNDVVSPSDSKLTLIEFYSTKHKNSAPLQGWLQRIQNGQITVDGRVV 72
Query: 323 TDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTV 502
DP IIL G ELVYHRLPWKEPD PYLLE+ YED+D+IALNKPSGLQVLPGGLFQQRTV
Sbjct: 73 NDPNIILSAGSELVYHRLPWKEPDVPYLLEVFYEDDDLIALNKPSGLQVLPGGLFQQRTV 132
Query: 503 LTQLQRHADNLTAS-GYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAVG 679
L QLQ A ++S Q HPVPVHRLGRGTSG+LLCAKTK+AK+ +AA+FAD TS V
Sbjct: 133 LKQLQWRASKQSSSLSSQASHPVPVHRLGRGTSGILLCAKTKLAKTCIAAYFADKTSVVD 192
Query: 680 VCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKPA 859
N + + R ITK+YRAL G++ ED+V I QPIG+V+YPGVAKGLYVASPSGKPA
Sbjct: 193 A--DNTVMELSQRKITKIYRALVHGIVDEDKVIIKQPIGIVRYPGVAKGLYVASPSGKPA 250
Query: 860 LSKVVVLERNLLSNSTLV-QVEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHE 1036
LSKV VLER++ N TLV QVEIQSGRPHQIRIHL+F+GHPL+GDPLY GQPK D E
Sbjct: 251 LSKVDVLERDVQRNCTLVQQVEIQSGRPHQIRIHLAFLGHPLLGDPLYVAGGQPKSFDSE 310
Query: 1037 SVDESFAQDGGYERPEKPVPGDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLHTVEESK 1216
D +FAQDGGYERP PVPGDCGY+LHA+ + SHP TNE+ +I+APLP L T EE +
Sbjct: 311 FADGTFAQDGGYERPVNPVPGDCGYYLHAYQLFLSHPTTNEVIKITAPLPSVLKTREEGR 370
Query: 1217 -AKKVL*EQRLAGVSI 1261
K + +R+ G+ I
Sbjct: 371 EVDKSVGSERIRGIHI 386
>ref|XP_006346977.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X3 [Solanum
tuberosum]
Length = 374
Score = 496 bits (1278), Expect = e-138
Identities = 247/361 (68%), Positives = 290/361 (80%), Gaps = 2/361 (0%)
Frame = +2
Query: 143 FGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVV 322
FG WPE N+G+ Y D++RP+DAG LI+FY RKYK+SAPL GWLQRI NKQITIDG VV
Sbjct: 14 FGVSWPELNEGLTYHDIVRPTDAGLMLIEFYFRKYKNSAPLQGWLQRIQNKQITIDGKVV 73
Query: 323 TDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTV 502
P LR G ELVYHRLPW+EPDAPYLLE+L++D+ +I +NKPSGLQVLPGGL+QQRTV
Sbjct: 74 ILPDTELRAGAELVYHRLPWREPDAPYLLEVLFQDDYLIVVNKPSGLQVLPGGLYQQRTV 133
Query: 503 LTQLQRHA--DNLTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAV 676
LTQLQ HA T+SG Q+ HPVPVHRLGRGTSG+LLCAKTK+ KSRLAA+FA+GTS V
Sbjct: 134 LTQLQWHACKPTTTSSGCQKTHPVPVHRLGRGTSGILLCAKTKLCKSRLAAYFAEGTSVV 193
Query: 677 GVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKP 856
+ +++ R I K+YRAL SGV+ DEV I QPIG +KYPGVAKGLYVASPSGKP
Sbjct: 194 ED-KCTNSECNTMRKICKIYRALVSGVMDMDEVVIKQPIGTIKYPGVAKGLYVASPSGKP 252
Query: 857 ALSKVVVLERNLLSNSTLVQVEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHE 1036
ALS V VLER+ +N TLVQVEIQSGRPHQIRIHLSFIG+PL+GDPLY + GQPK E
Sbjct: 253 ALSSVRVLERDSENNCTLVQVEIQSGRPHQIRIHLSFIGYPLIGDPLYVSGGQPKCFHPE 312
Query: 1037 SVDESFAQDGGYERPEKPVPGDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLHTVEESK 1216
+DESF +DGGY+RPE PVPGDCGY+LHAH + HP+TNE+ +I+APLP L T EE +
Sbjct: 313 LMDESFEKDGGYQRPENPVPGDCGYNLHAHQIGLIHPITNELIKITAPLPAILQTREERE 372
Query: 1217 A 1219
A
Sbjct: 373 A 373
>ref|XP_004143830.1| PREDICTED: RNA pseudourine synthase 5-like [Cucumis sativus]
Length = 371
Score = 492 bits (1266), Expect = e-136
Identities = 240/357 (67%), Positives = 290/357 (81%)
Frame = +2
Query: 146 GEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVVT 325
G PWP+ NDG++Y D+++P D+G +LI FYS KYKSSAPL GWLQRI N+QITIDG V+T
Sbjct: 11 GIPWPDLNDGLFYNDVVKPPDSGKSLIHFYSWKYKSSAPLEGWLQRIKNEQITIDGEVIT 70
Query: 326 DPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTVL 505
DP+ ILR G +LVY RLPWKEPD PYLLEILYEDN++IALNKPSGLQVLPGG+FQQRTVL
Sbjct: 71 DPETILRIGSDLVYRRLPWKEPDTPYLLEILYEDNEMIALNKPSGLQVLPGGVFQQRTVL 130
Query: 506 TQLQRHADNLTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAVGVC 685
TQLQ + + S +E HPVPVHRLGRGTSG+LLCAKTK+A+++ AA+FA+GTS+V
Sbjct: 131 TQLQWWSSKQSFSVSEELHPVPVHRLGRGTSGILLCAKTKLARTQFAAYFAEGTSSVRRN 190
Query: 686 RMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKPALS 865
R + ++ R I+K+YRAL +G+I +DEV +DQPIG ++YPGVA+GLYVA+PSGKPA S
Sbjct: 191 RNSTMEEGTKRKISKIYRALVTGIIHDDEVSVDQPIGRMQYPGVAQGLYVATPSGKPACS 250
Query: 866 KVVVLERNLLSNSTLVQVEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESVD 1045
KV VLER+ S TLVQVEIQSGRPHQIRIHLS IGHPLVGDPLY GQP E V+
Sbjct: 251 KVNVLERDEQSKHTLVQVEIQSGRPHQIRIHLSSIGHPLVGDPLYVAGGQPNCLHSEVVN 310
Query: 1046 ESFAQDGGYERPEKPVPGDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLHTVEESK 1216
+SFA+DGGYERP KPVPGDCGY+LHAH ++ HP TNE+ +I APLP L T E++
Sbjct: 311 QSFAEDGGYERPTKPVPGDCGYYLHAHQLILYHPKTNEVVKIIAPLPPILRTRIEAE 367
>ref|XP_004157313.1| PREDICTED: RNA pseudourine synthase 5-like [Cucumis sativus]
Length = 371
Score = 491 bits (1263), Expect = e-136
Identities = 239/357 (66%), Positives = 290/357 (81%)
Frame = +2
Query: 146 GEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVVT 325
G PWP+ NDG++Y D+++P D+G +LI FYS KYKSSAPL GWLQRI N+QITIDG V+T
Sbjct: 11 GIPWPDLNDGLFYNDVVKPPDSGKSLIHFYSWKYKSSAPLEGWLQRIKNEQITIDGEVIT 70
Query: 326 DPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQRTVL 505
DP+ ILR G +LVY RLPWKEPD PYLLEILYEDN++IALNKPSGLQVLPGG+FQQRTVL
Sbjct: 71 DPETILRIGSDLVYRRLPWKEPDTPYLLEILYEDNEMIALNKPSGLQVLPGGVFQQRTVL 130
Query: 506 TQLQRHADNLTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSAVGVC 685
TQLQ + + S +E HPVPVHRLGRGTSG+LLCAKTK+A+++ AA+FA+GTS+V
Sbjct: 131 TQLQWWSSKQSFSVSEELHPVPVHRLGRGTSGILLCAKTKLARTQFAAYFAEGTSSVRRN 190
Query: 686 RMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGKPALS 865
R + ++ R I+K+YRAL +G+I +DEV +DQPIG ++YPGVA+GLYVA+PSGKPA S
Sbjct: 191 RNSTMEEGTKRKISKIYRALVTGIIHDDEVSVDQPIGRMQYPGVAQGLYVATPSGKPACS 250
Query: 866 KVVVLERNLLSNSTLVQVEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDHESVD 1045
KV VLER+ S TLVQVEIQSGRPHQIRIHLS IGHPL+GDPLY GQP E V+
Sbjct: 251 KVNVLERDEQSKHTLVQVEIQSGRPHQIRIHLSSIGHPLLGDPLYVAGGQPNCLHSEVVN 310
Query: 1046 ESFAQDGGYERPEKPVPGDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLHTVEESK 1216
+SFA+DGGYERP KPVPGDCGY+LHAH ++ HP TNE+ +I APLP L T E++
Sbjct: 311 QSFAEDGGYERPTKPVPGDCGYYLHAHQLILYHPKTNEVVKIIAPLPPILRTRIEAE 367
>ref|XP_006346975.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X1 [Solanum
tuberosum] gi|565360441|ref|XP_006346976.1| PREDICTED:
RNA pseudouridine synthase 5-like isoform X2 [Solanum
tuberosum]
Length = 379
Score = 490 bits (1262), Expect = e-136
Identities = 247/366 (67%), Positives = 290/366 (79%), Gaps = 7/366 (1%)
Frame = +2
Query: 143 FGEPWPEFNDGIYYRDLLRPSDAGATLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGCVV 322
FG WPE N+G+ Y D++RP+DAG LI+FY RKYK+SAPL GWLQRI NKQITIDG VV
Sbjct: 14 FGVSWPELNEGLTYHDIVRPTDAGLMLIEFYFRKYKNSAPLQGWLQRIQNKQITIDGKVV 73
Query: 323 TDPKIIL-----RGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLF 487
P L R G ELVYHRLPW+EPDAPYLLE+L++D+ +I +NKPSGLQVLPGGL+
Sbjct: 74 ILPDTELSFWMCRAGAELVYHRLPWREPDAPYLLEVLFQDDYLIVVNKPSGLQVLPGGLY 133
Query: 488 QQRTVLTQLQRHA--DNLTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFAD 661
QQRTVLTQLQ HA T+SG Q+ HPVPVHRLGRGTSG+LLCAKTK+ KSRLAA+FA+
Sbjct: 134 QQRTVLTQLQWHACKPTTTSSGCQKTHPVPVHRLGRGTSGILLCAKTKLCKSRLAAYFAE 193
Query: 662 GTSAVGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVAS 841
GTS V + +++ R I K+YRAL SGV+ DEV I QPIG +KYPGVAKGLYVAS
Sbjct: 194 GTSVVED-KCTNSECNTMRKICKIYRALVSGVMDMDEVVIKQPIGTIKYPGVAKGLYVAS 252
Query: 842 PSGKPALSKVVVLERNLLSNSTLVQVEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPK 1021
PSGKPALS V VLER+ +N TLVQVEIQSGRPHQIRIHLSFIG+PL+GDPLY + GQPK
Sbjct: 253 PSGKPALSSVRVLERDSENNCTLVQVEIQSGRPHQIRIHLSFIGYPLIGDPLYVSGGQPK 312
Query: 1022 FSDHESVDESFAQDGGYERPEKPVPGDCGYHLHAHHVVFSHPLTNEINEISAPLPLNLHT 1201
E +DESF +DGGY+RPE PVPGDCGY+LHAH + HP+TNE+ +I+APLP L T
Sbjct: 313 CFHPELMDESFEKDGGYQRPENPVPGDCGYNLHAHQIGLIHPITNELIKITAPLPAILQT 372
Query: 1202 VEESKA 1219
EE +A
Sbjct: 373 REEREA 378
>ref|XP_006651272.1| PREDICTED: RNA pseudouridine synthase 5-like [Oryza brachyantha]
Length = 396
Score = 468 bits (1204), Expect = e-129
Identities = 244/374 (65%), Positives = 285/374 (76%), Gaps = 11/374 (2%)
Frame = +2
Query: 140 SFGEPWPEFNDGIYYRDLLRPSDAGAT--LIDFYSRKYKSSAPLHGWLQRIHNKQITIDG 313
SFG PWPEFN+GI Y D R +DAGAT LI+FYS YKSSAPL GW++RI N QIT+DG
Sbjct: 22 SFGRPWPEFNEGISYTDTFRCADAGATMTLIEFYSTTYKSSAPLPGWIKRIRNGQITVDG 81
Query: 314 CVVTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQ 493
VVTDP + LR G +L+YHRLPW+EP AP+LL +LYED+D+IALNKPSGLQVLP GLFQQ
Sbjct: 82 EVVTDPDMTLRQGSKLIYHRLPWQEPFAPHLLGVLYEDDDMIALNKPSGLQVLPKGLFQQ 141
Query: 494 RTVLTQLQRHADNLTASGYQ-----EPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFA 658
RTVL QLQ + +S + HPVPVHRLGRGTSG+LLCAKTK+AK+RLAA+FA
Sbjct: 142 RTVLAQLQMKDWKIPSSFCSKQKDVQSHPVPVHRLGRGTSGLLLCAKTKLAKARLAAYFA 201
Query: 659 DGTSAVGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVA 838
+GT+ G R ++T R I+K YRAL +G++ DEV I QPIGLV YPGVA+GLY A
Sbjct: 202 EGTTNAGKSR-DETDMCKVRKISKFYRALVTGILENDEVMITQPIGLVHYPGVAEGLYAA 260
Query: 839 SPSGKPALSKVVVLERNLLSNSTLVQVEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQP 1018
SGKPA+SKV VLER N TLVQVEI SGRPHQIRIHL+ IGHPLV DPLY GQP
Sbjct: 261 CSSGKPAMSKVSVLERLEHRNQTLVQVEIHSGRPHQIRIHLACIGHPLVDDPLYGIGGQP 320
Query: 1019 KFSDHE--SVDESFAQDGGYERPEKPVPGDCGYHLHAHHVVFSHPLTNEINEISAPLPLN 1192
KF + E S D+SFA DGGYERP +PVPGDCGYHLHAH +V HP TNE+ +I+APLP
Sbjct: 321 KFDELESSSTDDSFAYDGGYERPLQPVPGDCGYHLHAHWLVLCHPTTNEMIKITAPLPQI 380
Query: 1193 LHTVEESK--AKKV 1228
L T EE + AK+V
Sbjct: 381 LQTREEQQDTAKQV 394
>sp|Q0DST9.2|PUS5_ORYSJ RecName: Full=RNA pseudouridine synthase 5; AltName: Full=RNA
pseudouridylate synthase 5; AltName: Full=RNA-uridine
isomerase 5
Length = 397
Score = 464 bits (1193), Expect = e-128
Identities = 237/370 (64%), Positives = 284/370 (76%), Gaps = 9/370 (2%)
Frame = +2
Query: 134 MVSFGEPWPEFNDGIYYRDLLRPSDAGAT--LIDFYSRKYKSSAPLHGWLQRIHNKQITI 307
+ SFG PWPEFN+GI Y D R +DAGAT LI+FYS YKSSAPL GW++RI + QIT+
Sbjct: 21 LYSFGTPWPEFNEGISYIDTFRCADAGATTTLIEFYSTSYKSSAPLPGWIKRIRDGQITV 80
Query: 308 DGCVVTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLF 487
DG V TDP +ILR G +LVYHRLPW+EP AP+LL++LYED+D+IALNKPSGLQVLP GLF
Sbjct: 81 DGEVATDPDMILREGSKLVYHRLPWQEPFAPHLLDVLYEDDDMIALNKPSGLQVLPKGLF 140
Query: 488 QQRTVLTQLQRHADNLTASGYQ-----EPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAF 652
QQRTVL QLQ + +S + HPVPVHRLGRGTSG+LLCAKTK+AK++LAA+
Sbjct: 141 QQRTVLAQLQLKDWKMPSSFCSKRKDAQSHPVPVHRLGRGTSGLLLCAKTKLAKAQLAAY 200
Query: 653 FADGTSAVGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLY 832
FA+G + G R ++T R I+K YRAL +G++ DEV I QPIGLV+YPGVA+GLY
Sbjct: 201 FAEGATNAGKSR-DETDICKARKISKFYRALVTGILENDEVMITQPIGLVRYPGVAEGLY 259
Query: 833 VASPSGKPALSKVVVLERNLLSNSTLVQVEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDG 1012
A SGKPA+SKV VLER + N TL+QVEI SGRPHQIRIHL++IGHPLV DPLY G
Sbjct: 260 AACSSGKPAMSKVRVLERLKIHNHTLIQVEIHSGRPHQIRIHLAYIGHPLVDDPLYGIGG 319
Query: 1013 QPKFSDHE--SVDESFAQDGGYERPEKPVPGDCGYHLHAHHVVFSHPLTNEINEISAPLP 1186
QPKF + E S +SFA DGGYERP +PVPGDCGYHLHAH +V HP TNE+ +I+APLP
Sbjct: 320 QPKFDEPEPTSTADSFAYDGGYERPLQPVPGDCGYHLHAHWLVLCHPTTNEMIKITAPLP 379
Query: 1187 LNLHTVEESK 1216
L T EE +
Sbjct: 380 HILQTREEQQ 389
>ref|XP_006403820.1| hypothetical protein EUTSA_v10010446mg [Eutrema salsugineum]
gi|557104939|gb|ESQ45273.1| hypothetical protein
EUTSA_v10010446mg [Eutrema salsugineum]
Length = 382
Score = 462 bits (1189), Expect = e-127
Identities = 232/362 (64%), Positives = 283/362 (78%), Gaps = 5/362 (1%)
Frame = +2
Query: 146 GEPWPEFNDGIYYRDLLRPSDAGA---TLIDFYSRKYKSSAPLHGWLQRIHNKQITIDGC 316
G PWPE NDG+ Y+D++ + + T+ DFYS KYKSSAPL GW+QRI N QI IDG
Sbjct: 12 GLPWPELNDGLAYKDVVSSFSSSSELTTVSDFYSTKYKSSAPLLGWIQRIQNGQIQIDGE 71
Query: 317 VVTDPKIILRGGEELVYHRLPWKEPDAPYLLEILYEDNDVIALNKPSGLQVLPGGLFQQR 496
VV D +LR G +LVYHRLPWKEPD PY LE+LYEDND+IALNKPSGLQVLPGGLFQQR
Sbjct: 72 VVKDHNTLLRRGSKLVYHRLPWKEPDTPYSLEVLYEDNDLIALNKPSGLQVLPGGLFQQR 131
Query: 497 TVLTQLQR-HADNLTASGYQEPHPVPVHRLGRGTSGVLLCAKTKIAKSRLAAFFADGTSA 673
T+LTQLQ + +++G +E HPVPVHRLGRGTSG+LLCAKTK+AK++LA++FA+GTS
Sbjct: 132 TLLTQLQWCFSKKDSSTGARESHPVPVHRLGRGTSGILLCAKTKLAKTKLASYFAEGTSL 191
Query: 674 VGVCRMNDTQQKATRNITKLYRALASGVIIEDEVFIDQPIGLVKYPGVAKGLYVASPSGK 853
VG + D + R I+K+YRALA G++ EDEV I QPIG+V+YPGVAKGLYVAS GK
Sbjct: 192 VGFGNL-DQECGTGRKISKIYRALADGIVEEDEVVIKQPIGVVRYPGVAKGLYVASSEGK 250
Query: 854 PALSKVVVLERNLLSNSTLVQVEIQSGRPHQIRIHLSFIGHPLVGDPLYSTDGQPKFSDH 1033
PALSKV VLERN+ N TLV+VEIQSGRPHQIRIHL+++GHPLVGDPLY G+PK D
Sbjct: 251 PALSKVAVLERNMQRNCTLVKVEIQSGRPHQIRIHLAYMGHPLVGDPLYVAGGKPKCFDP 310
Query: 1034 ESVDESFAQDGGYERPEKPVPGDCGYHLHAHHVVFSHPLT-NEINEISAPLPLNLHTVEE 1210
++VD +FA+DGGY RP + VPGDCGYHLHAH V + L N++ ++ APLP L T E
Sbjct: 311 DAVDSAFAEDGGYRRPNQAVPGDCGYHLHAHQVELPNLLNLNKVVKVVAPLPPILQTSSE 370
Query: 1211 SK 1216
++
Sbjct: 371 AE 372