BLASTX nr result

ID: Rehmannia23_contig00023533 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00023533
         (506 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006344137.1| PREDICTED: LOB domain-containing protein 41-...    76   5e-12
ref|XP_004238927.1| PREDICTED: LOB domain-containing protein 41-...    69   8e-10
ref|XP_002283795.1| PREDICTED: LOB domain-containing protein 41 ...    57   2e-06
ref|XP_002276899.1| PREDICTED: LOB domain-containing protein 41 ...    56   6e-06
emb|CAN77368.1| hypothetical protein VITISV_011159 [Vitis vinifera]    56   6e-06
emb|CBI27018.3| unnamed protein product [Vitis vinifera]               55   1e-05

>ref|XP_006344137.1| PREDICTED: LOB domain-containing protein 41-like [Solanum
           tuberosum]
          Length = 253

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 52/123 (42%), Positives = 69/123 (56%), Gaps = 13/123 (10%)
 Frame = -3

Query: 489 PLQGGDIRHLSK---DSASTLRRVRGRTRFKA-----GHAKSEVDSVSTGLL-SEPEGKF 337
           PL+G DIRH+SK   D+   ++   GR + K        A +E ++    LL ++P  KF
Sbjct: 131 PLKGCDIRHVSKNNSDNQQVIKTRNGRLKRKGTFDSVASASAEAEAAEEYLLKNQPPLKF 190

Query: 336 TITGWD----CDQGVLERAPSHDSVSVETVEPALVNRDEQPVRRVLKPEPQPSEIGLELT 169
           +ITGWD     D  +++RA SHDS SVETVEP L+     PV    K E     +GLELT
Sbjct: 191 SITGWDQFEEIDDELIKRAASHDSFSVETVEPTLLVNRVDPV----KLEEDGDHVGLELT 246

Query: 168 LGL 160
           LGL
Sbjct: 247 LGL 249


>ref|XP_004238927.1| PREDICTED: LOB domain-containing protein 41-like [Solanum
           lycopersicum]
          Length = 254

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 51/127 (40%), Positives = 71/127 (55%), Gaps = 17/127 (13%)
 Frame = -3

Query: 489 PLQGGDIRHLSKDSAST------------LRRVRGRTRFKAGHAKSEVDSVSTGLL-SEP 349
           PL+G DIRH+SK +++             L+R +G T   A  A  EV++    LL ++P
Sbjct: 128 PLKGCDIRHVSKYNSTNSDNQQVKTRNGRLKR-KGSTFDSAASASVEVEAAEEYLLKNQP 186

Query: 348 EGKFTITGWDC----DQGVLERAPSHDSVSVETVEPALVNRDEQPVRRVLKPEPQPSEIG 181
             KF+ITGWD     +  +++R+ SHDS SVETVEP L+     PV    K E     +G
Sbjct: 187 PLKFSITGWDQFEEREDEMIKRSQSHDSFSVETVEPTLLVNRVDPV----KLEEDGDLLG 242

Query: 180 LELTLGL 160
           L+LTLGL
Sbjct: 243 LDLTLGL 249


>ref|XP_002283795.1| PREDICTED: LOB domain-containing protein 41 [Vitis vinifera]
           gi|147795554|emb|CAN72182.1| hypothetical protein
           VITISV_004355 [Vitis vinifera]
          Length = 283

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 52/140 (37%), Positives = 69/140 (49%), Gaps = 27/140 (19%)
 Frame = -3

Query: 489 PLQGGDIRHLSKD---SASTLRRVRGRTRFKAGHAKSEVDSVSTGLLSEPEGKFTIT-GW 322
           PL+  DIRH+SKD   +A+ L R + R RFK    +++  +   G  S  E K  +  G 
Sbjct: 124 PLKAYDIRHVSKDENSAANDLHRAKNRCRFKRSGVRAKSGN-KAGTNSVAESKQGMNRGS 182

Query: 321 DCDQGVLERAPSHDS---------------------VSVETVEPALVNRDEQPVRRVLKP 205
             D+  L R+ SHDS                     VSVET EP+ + R EQ  +RV KP
Sbjct: 183 LADE--LNRSTSHDSTVSHPSEPHTVEGESRETVSMVSVETAEPSFLFRAEQ--KRVQKP 238

Query: 204 EPQPSEIGLEL--TLGLNPV 151
           E +    GLEL  TLGL P+
Sbjct: 239 EKREENRGLELELTLGLGPI 258


>ref|XP_002276899.1| PREDICTED: LOB domain-containing protein 41 [Vitis vinifera]
          Length = 272

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 48/134 (35%), Positives = 60/134 (44%), Gaps = 16/134 (11%)
 Frame = -3

Query: 504 STAPAPLQGGDIRHLSKD-----SASTLRRVRGRTRFKAGHAKSEVDSVSTGLLSEPEGK 340
           S+   PL+ GDIRH+SKD     S+  L +V+ R RFK    K      S     E  G 
Sbjct: 119 SSMSPPLKAGDIRHVSKDENSAGSSHELHKVKSRGRFKRSSGKPRARVESAAEFDESAGV 178

Query: 339 FTITGWDCDQGVLER--APSH---------DSVSVETVEPALVNRDEQPVRRVLKPEPQP 193
                  C +  L R    SH         DS+SVETVE +LV           KP    
Sbjct: 179 ILSR---CYKSELSRDSRVSHPGSRESGEADSMSVETVEASLV-----------KPTRDG 224

Query: 192 SEIGLELTLGLNPV 151
           S++ LELTLGL P+
Sbjct: 225 SDVELELTLGLEPI 238


>emb|CAN77368.1| hypothetical protein VITISV_011159 [Vitis vinifera]
          Length = 272

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 48/134 (35%), Positives = 60/134 (44%), Gaps = 16/134 (11%)
 Frame = -3

Query: 504 STAPAPLQGGDIRHLSKD-----SASTLRRVRGRTRFKAGHAKSEVDSVSTGLLSEPEGK 340
           S+   PL+ GDIRH+SKD     S+  L +V+ R RFK    K      S     E  G 
Sbjct: 119 SSMSPPLKAGDIRHVSKDENSAGSSHELHKVKSRGRFKRSSGKPRARVESAAEFDESAGV 178

Query: 339 FTITGWDCDQGVLER--APSH---------DSVSVETVEPALVNRDEQPVRRVLKPEPQP 193
                  C +  L R    SH         DS+SVETVE +LV           KP    
Sbjct: 179 ILSR---CYKSELSRDSRVSHPGSRESGEADSMSVETVEASLV-----------KPTRDG 224

Query: 192 SEIGLELTLGLNPV 151
           S++ LELTLGL P+
Sbjct: 225 SDVELELTLGLEPI 238


>emb|CBI27018.3| unnamed protein product [Vitis vinifera]
          Length = 385

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 49/136 (36%), Positives = 67/136 (49%), Gaps = 17/136 (12%)
 Frame = -3

Query: 489 PLQGGDIRHLSKDSAS--TLRRVRGRTRFK--AGHAKSEVDSVSTGLLSEPEGKFTITGW 322
           PL+  DIRHLSKD+ S   L + + R+RFK     +K  +DS           +F   GW
Sbjct: 124 PLKAYDIRHLSKDANSPHDLHKAKTRSRFKRCGARSKPHLDS----------AEFCNPGW 173

Query: 321 DCDQGV-LERAPSHDS----------VSVETVEPALVNRDEQPVRRVLKPEPQ--PSEIG 181
           +    V   R PSHDS           SVETVE +L    +    ++LK + Q   +E G
Sbjct: 174 NQFSPVDYNRTPSHDSSLIQQETDSMFSVETVEASLATPPKP--NQLLKSDGQTDKTEAG 231

Query: 180 LELTLGLNPVIQTYIS 133
           LELTLG  P+ + + S
Sbjct: 232 LELTLGFYPISRPHAS 247


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