BLASTX nr result
ID: Rehmannia23_contig00022367
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00022367
(1176 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containi... 603 e-170
emb|CBI27232.3| unnamed protein product [Vitis vinifera] 603 e-170
ref|XP_004232626.1| PREDICTED: pentatricopeptide repeat-containi... 600 e-169
ref|XP_006363176.1| PREDICTED: pentatricopeptide repeat-containi... 598 e-168
ref|XP_006468575.1| PREDICTED: pentatricopeptide repeat-containi... 580 e-163
ref|XP_006448599.1| hypothetical protein CICLE_v10014519mg [Citr... 580 e-163
ref|XP_004295517.1| PREDICTED: pentatricopeptide repeat-containi... 577 e-162
ref|XP_002297917.1| hypothetical protein POPTR_0001s12190g [Popu... 575 e-161
gb|EOX96827.1| Pentatricopeptide repeat (PPR) superfamily protei... 573 e-161
gb|EMJ12567.1| hypothetical protein PRUPE_ppa002507mg [Prunus pe... 573 e-161
ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata] g... 568 e-159
ref|NP_193742.1| pentatricopeptide repeat-containing protein [Ar... 567 e-159
ref|XP_006283284.1| hypothetical protein CARUB_v10004320mg [Caps... 564 e-158
ref|XP_002528143.1| pentatricopeptide repeat-containing protein,... 564 e-158
ref|XP_002304600.2| hypothetical protein POPTR_0003s15360g [Popu... 564 e-158
ref|XP_006404148.1| hypothetical protein EUTSA_v10010168mg [Eutr... 560 e-157
gb|EXB83265.1| hypothetical protein L484_011559 [Morus notabilis] 551 e-154
ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containi... 551 e-154
ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containi... 551 e-154
ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containi... 551 e-154
>ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein At4g20090-like
[Vitis vinifera]
Length = 644
Score = 603 bits (1554), Expect = e-170
Identities = 286/391 (73%), Positives = 338/391 (86%)
Frame = +2
Query: 2 GKAHLHHKAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKNIL 181
GKAHL KA++LF RMVDEFQC++TV+SFNSVLNVIIQ+G++H ALEFY+ + K NI
Sbjct: 110 GKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNIS 169
Query: 182 PNVLTFNLVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVAL 361
PNVL+FNLVIKA+CKLGLV RAI+VFREM+ KCEPD +TYCTLMDGLCKEDRID+AV L
Sbjct: 170 PNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLL 229
Query: 362 FDEMQIEGCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGLCL 541
DEMQIEGC PS TFNVLINGLCKKGD+ R KLVDNMFLKGCVPNEVTYNT+I+GLCL
Sbjct: 230 LDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCL 289
Query: 542 KGKLDKAVSLLARMLSNKLIPNDVTYGTIINGLVKQRRAVDGVHVLMAMEERGYKENEYV 721
KGKLDKAVSLL RM+++K +PNDVTYGT+INGLVKQ R+VDGVH+L ++EERG+ NEY
Sbjct: 290 KGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYA 349
Query: 722 YSALISGLFKEGKSEEALNLWSKMIGKGCKPNIVVYSALIDGLCREGKPYEAEEYLFQMI 901
YS LISGLFKE KSEEA+ LW KM+ KGC+PNIVVYSALIDGLCREGK EA+E L +M+
Sbjct: 350 YSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMV 409
Query: 902 NIGWSPNAFTCSSLMRGFFKVGNCDRAMLVWKEMVGKDYMDNEVCYSVLLHGLCKNGKLK 1081
N G +PNAFT SSL++GFFK GN +A+ VWKEM + + NE+CYSVL+HGLC++GKL+
Sbjct: 410 NKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLR 469
Query: 1082 DALMVWKHVLTKGLTPDVVAYSSMIHGLCNA 1174
+A+M+W H+L +GL PDVVAYSSMIHGLCNA
Sbjct: 470 EAMMMWTHMLGRGLRPDVVAYSSMIHGLCNA 500
Score = 118 bits (295), Expect = 5e-24
Identities = 87/337 (25%), Positives = 149/337 (44%), Gaps = 56/337 (16%)
Frame = +2
Query: 23 KAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVY--------------HHALEF-YDHV 157
KAV L DRMV +C ++ +++N +++QG HHA E+ Y +
Sbjct: 295 KAVSLLDRMVAS-KCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTL 353
Query: 158 INN------------------KKNILPNVLTFNLVIKALCKLGLVSRAIDVFREMSSLKC 283
I+ +K PN++ ++ +I LC+ G + A ++ EM + C
Sbjct: 354 ISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGC 413
Query: 284 EPDAYTYCTLMDGLCKEDRIDDAVALFDEMQIEGCSPSPATFNVLINGLCKKGDLARAAK 463
P+A+TY +L+ G K A+ ++ EM C P+ ++VLI+GLC+ G L A
Sbjct: 414 TPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMM 473
Query: 464 LVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLARMLSNKLI--PNDVTYGTIING 637
+ +M +G P+ V Y+++IHGLC G ++ + L ML + P+ VTY ++
Sbjct: 474 MWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRA 533
Query: 638 LVKQRRAVDGVHVLMAMEERGY---------------------KENEYVYSALISGLFKE 754
L KQ + +L +M +RG ++ L+ L K
Sbjct: 534 LCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKR 593
Query: 755 GKSEEALNLWSKMIGKGCKPNIVVYSALIDGLCREGK 865
+ A + M+ K PN + +I LC+ K
Sbjct: 594 QRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKK 630
Score = 114 bits (286), Expect = 6e-23
Identities = 77/283 (27%), Positives = 138/283 (48%), Gaps = 3/283 (1%)
Frame = +2
Query: 5 KAHLHHKAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKNILP 184
K +A+ L+ +MV++ C+ + ++++++ + ++G A E ++N K P
Sbjct: 359 KEEKSEEAMGLWKKMVEK-GCQPNIVVYSALIDGLCREGKLDEAKEILCEMVN--KGCTP 415
Query: 185 NVLTFNLVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVALF 364
N T++ +IK K G +AI V++EM+ C P+ Y L+ GLC++ ++ +A+ ++
Sbjct: 416 NAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMW 475
Query: 365 DEMQIEGCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLK--GCVPNEVTYNTLIHGLC 538
M G P ++ +I+GLC G + KL + M + P+ VTYN L+ LC
Sbjct: 476 THMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALC 535
Query: 539 LKGKLDKAVSLLARMLSNKLIPNDVTYGTIINGL-VKQRRAVDGVHVLMAMEERGYKENE 715
+ + A+ LL ML P+ +T +N L K DG L + R +K
Sbjct: 536 KQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQR 595
Query: 716 YVYSALISGLFKEGKSEEALNLWSKMIGKGCKPNIVVYSALID 844
V +A I + + + W ++I + CKP V A+ID
Sbjct: 596 IVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKV--QAIID 636
>emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 603 bits (1554), Expect = e-170
Identities = 286/391 (73%), Positives = 338/391 (86%)
Frame = +2
Query: 2 GKAHLHHKAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKNIL 181
GKAHL KA++LF RMVDEFQC++TV+SFNSVLNVIIQ+G++H ALEFY+ + K NI
Sbjct: 126 GKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNIS 185
Query: 182 PNVLTFNLVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVAL 361
PNVL+FNLVIKA+CKLGLV RAI+VFREM+ KCEPD +TYCTLMDGLCKEDRID+AV L
Sbjct: 186 PNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLL 245
Query: 362 FDEMQIEGCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGLCL 541
DEMQIEGC PS TFNVLINGLCKKGD+ R KLVDNMFLKGCVPNEVTYNT+I+GLCL
Sbjct: 246 LDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCL 305
Query: 542 KGKLDKAVSLLARMLSNKLIPNDVTYGTIINGLVKQRRAVDGVHVLMAMEERGYKENEYV 721
KGKLDKAVSLL RM+++K +PNDVTYGT+INGLVKQ R+VDGVH+L ++EERG+ NEY
Sbjct: 306 KGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYA 365
Query: 722 YSALISGLFKEGKSEEALNLWSKMIGKGCKPNIVVYSALIDGLCREGKPYEAEEYLFQMI 901
YS LISGLFKE KSEEA+ LW KM+ KGC+PNIVVYSALIDGLCREGK EA+E L +M+
Sbjct: 366 YSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMV 425
Query: 902 NIGWSPNAFTCSSLMRGFFKVGNCDRAMLVWKEMVGKDYMDNEVCYSVLLHGLCKNGKLK 1081
N G +PNAFT SSL++GFFK GN +A+ VWKEM + + NE+CYSVL+HGLC++GKL+
Sbjct: 426 NKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLR 485
Query: 1082 DALMVWKHVLTKGLTPDVVAYSSMIHGLCNA 1174
+A+M+W H+L +GL PDVVAYSSMIHGLCNA
Sbjct: 486 EAMMMWTHMLGRGLRPDVVAYSSMIHGLCNA 516
Score = 118 bits (295), Expect = 5e-24
Identities = 87/337 (25%), Positives = 149/337 (44%), Gaps = 56/337 (16%)
Frame = +2
Query: 23 KAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVY--------------HHALEF-YDHV 157
KAV L DRMV +C ++ +++N +++QG HHA E+ Y +
Sbjct: 311 KAVSLLDRMVAS-KCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTL 369
Query: 158 INN------------------KKNILPNVLTFNLVIKALCKLGLVSRAIDVFREMSSLKC 283
I+ +K PN++ ++ +I LC+ G + A ++ EM + C
Sbjct: 370 ISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGC 429
Query: 284 EPDAYTYCTLMDGLCKEDRIDDAVALFDEMQIEGCSPSPATFNVLINGLCKKGDLARAAK 463
P+A+TY +L+ G K A+ ++ EM C P+ ++VLI+GLC+ G L A
Sbjct: 430 TPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMM 489
Query: 464 LVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLARMLSNKLI--PNDVTYGTIING 637
+ +M +G P+ V Y+++IHGLC G ++ + L ML + P+ VTY ++
Sbjct: 490 MWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRA 549
Query: 638 LVKQRRAVDGVHVLMAMEERGY---------------------KENEYVYSALISGLFKE 754
L KQ + +L +M +RG ++ L+ L K
Sbjct: 550 LCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKR 609
Query: 755 GKSEEALNLWSKMIGKGCKPNIVVYSALIDGLCREGK 865
+ A + M+ K PN + +I LC+ K
Sbjct: 610 QRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKK 646
Score = 114 bits (286), Expect = 6e-23
Identities = 77/283 (27%), Positives = 138/283 (48%), Gaps = 3/283 (1%)
Frame = +2
Query: 5 KAHLHHKAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKNILP 184
K +A+ L+ +MV++ C+ + ++++++ + ++G A E ++N K P
Sbjct: 375 KEEKSEEAMGLWKKMVEK-GCQPNIVVYSALIDGLCREGKLDEAKEILCEMVN--KGCTP 431
Query: 185 NVLTFNLVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVALF 364
N T++ +IK K G +AI V++EM+ C P+ Y L+ GLC++ ++ +A+ ++
Sbjct: 432 NAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMW 491
Query: 365 DEMQIEGCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLK--GCVPNEVTYNTLIHGLC 538
M G P ++ +I+GLC G + KL + M + P+ VTYN L+ LC
Sbjct: 492 THMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALC 551
Query: 539 LKGKLDKAVSLLARMLSNKLIPNDVTYGTIINGL-VKQRRAVDGVHVLMAMEERGYKENE 715
+ + A+ LL ML P+ +T +N L K DG L + R +K
Sbjct: 552 KQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQR 611
Query: 716 YVYSALISGLFKEGKSEEALNLWSKMIGKGCKPNIVVYSALID 844
V +A I + + + W ++I + CKP V A+ID
Sbjct: 612 IVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKV--QAIID 652
>ref|XP_004232626.1| PREDICTED: pentatricopeptide repeat-containing protein At4g20090-like
[Solanum lycopersicum]
Length = 717
Score = 600 bits (1546), Expect = e-169
Identities = 285/391 (72%), Positives = 336/391 (85%)
Frame = +2
Query: 2 GKAHLHHKAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKNIL 181
GKA L KAV+LF+RMVDEFQCK+TVKSFNSVLNVI+Q G+YH AL+FY V+NN+ NI+
Sbjct: 184 GKARLPEKAVELFERMVDEFQCKRTVKSFNSVLNVIVQTGLYHRALDFYADVVNNR-NIM 242
Query: 182 PNVLTFNLVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVAL 361
PNVL+FNLVIK +CKL +V RA++VFREM + KCEPD YTYCTLMDGLCK+DRID+AV L
Sbjct: 243 PNVLSFNLVIKTMCKLRMVDRAMEVFREMPTWKCEPDVYTYCTLMDGLCKDDRIDEAVIL 302
Query: 362 FDEMQIEGCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGLCL 541
DEMQ+EGC P P TFNVLINGLC+KGDLARAAKLVDNMFLKGCVPN+VTYNTLIHGLCL
Sbjct: 303 LDEMQVEGCLPVPVTFNVLINGLCRKGDLARAAKLVDNMFLKGCVPNDVTYNTLIHGLCL 362
Query: 542 KGKLDKAVSLLARMLSNKLIPNDVTYGTIINGLVKQRRAVDGVHVLMAMEERGYKENEYV 721
KGKL+KAVSLL RM+SNK IP D+TYGTIING VKQRRA DGV +L+AM+E+G+ NEYV
Sbjct: 363 KGKLEKAVSLLDRMVSNKYIPTDITYGTIINGFVKQRRATDGVQILLAMQEKGHLANEYV 422
Query: 722 YSALISGLFKEGKSEEALNLWSKMIGKGCKPNIVVYSALIDGLCREGKPYEAEEYLFQMI 901
YSAL+SGLFKEGK EEAL +W +MI KG KPNIV YSA IDGLCREGKP EA+E L +M
Sbjct: 423 YSALVSGLFKEGKPEEALKIWKEMIEKGVKPNIVAYSAFIDGLCREGKPDEAKEILSEMN 482
Query: 902 NIGWSPNAFTCSSLMRGFFKVGNCDRAMLVWKEMVGKDYMDNEVCYSVLLHGLCKNGKLK 1081
+G +PNA+T SLM+G+FK + ++A+L+WK+M NE+CYSVL+HGLC++GKLK
Sbjct: 483 KMGCTPNAYTYCSLMKGYFKTSDSNKAILLWKDMATSGITCNEICYSVLIHGLCQDGKLK 542
Query: 1082 DALMVWKHVLTKGLTPDVVAYSSMIHGLCNA 1174
+A+MVWKH+L KGL PD VAYSSMIHGLCNA
Sbjct: 543 EAMMVWKHMLGKGLVPDAVAYSSMIHGLCNA 573
Score = 153 bits (387), Expect = 1e-34
Identities = 114/419 (27%), Positives = 191/419 (45%), Gaps = 37/419 (8%)
Frame = +2
Query: 23 KAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKNILPNVLTFN 202
+AV L D M E C +FN ++N + ++G A + D++ K +PN +T+N
Sbjct: 298 EAVILLDEMQVE-GCLPVPVTFNVLINGLCRKGDLARAAKLVDNMF--LKGCVPNDVTYN 354
Query: 203 LVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVALFDEMQIE 382
+I LC G + +A+ + M S K P TY T+++G K+ R D V + MQ +
Sbjct: 355 TLIHGLCLKGKLEKAVSLLDRMVSNKYIPTDITYGTIINGFVKQRRATDGVQILLAMQEK 414
Query: 383 GCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKA 562
G + ++ L++GL K+G A K+ M KG PN V Y+ I GLC +GK D+A
Sbjct: 415 GHLANEYVYSALVSGLFKEGKPEEALKIWKEMIEKGVKPNIVAYSAFIDGLCREGKPDEA 474
Query: 563 VSLLARMLSNKLIPNDVTYGTIINGLVKQRRAVDGVHVLMAMEERGYKENEYVYSALISG 742
+L+ M PN TY +++ G K + + + M G NE YS LI G
Sbjct: 475 KEILSEMNKMGCTPNAYTYCSLMKGYFKTSDSNKAILLWKDMATSGITCNEICYSVLIHG 534
Query: 743 LFKEGKSEEALNLWSKMIGKGC-------------------------------------K 811
L ++GK +EA+ +W M+GKG +
Sbjct: 535 LCQDGKLKEAMMVWKHMLGKGLVPDAVAYSSMIHGLCNAGSVDQGLRLFNEMLCRGSDSQ 594
Query: 812 PNIVVYSALIDGLCREGKPYEAEEYLFQMINIGWSPNAFTCSSLMRGFFKVGNCDRAMLV 991
P++V Y+ +I+ LC+ + A + L M++ G P+ TC+ ++ + N
Sbjct: 595 PDVVAYNIIINALCKVDRISLAIDLLNTMLDRGCDPDKITCNIFLKTLNEKAN------- 647
Query: 992 WKEMVGKDYMDNEVCYSVLLHGLCKNGKLKDALMVWKHVLTKGLTPDVVAYSSMIHGLC 1168
G+D++D L+ L + ++ A + + +L K L+P + +I LC
Sbjct: 648 -PSQDGEDFLDK------LVLQLYRRQRIIGASRIIEVMLQKILSPKSSTWEMIIRELC 699
Score = 68.9 bits (167), Expect = 4e-09
Identities = 43/184 (23%), Positives = 84/184 (45%), Gaps = 23/184 (12%)
Frame = +2
Query: 86 FNSVLNVIIQQGVYHHALEFYDHVINNKKNILPNVLTFNLVIKALCKLGLVSRAIDVFRE 265
++ +++ + Q G A+ + H++ K ++P+ + ++ +I LC G V + + +F E
Sbjct: 528 YSVLIHGLCQDGKLKEAMMVWKHMLG--KGLVPDAVAYSSMIHGLCNAGSVDQGLRLFNE 585
Query: 266 M--SSLKCEPDAYTYCTLMDGLCKEDRIDDAVALFDEMQIEGCSPSPATFNVLINGLCKK 439
M +PD Y +++ LCK DRI A+ L + M GC P T N+ + L +K
Sbjct: 586 MLCRGSDSQPDVVAYNIIINALCKVDRISLAIDLLNTMLDRGCDPDKITCNIFLKTLNEK 645
Query: 440 GD---------------------LARAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLD 556
+ + A+++++ M K P T+ +I LC K+
Sbjct: 646 ANPSQDGEDFLDKLVLQLYRRQRIIGASRIIEVMLQKILSPKSSTWEMIIRELCKPKKVQ 705
Query: 557 KAVS 568
A++
Sbjct: 706 GAIN 709
>ref|XP_006363176.1| PREDICTED: pentatricopeptide repeat-containing protein At4g20090-like
isoform X1 [Solanum tuberosum]
gi|565395083|ref|XP_006363177.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g20090-like isoform X2 [Solanum tuberosum]
Length = 717
Score = 598 bits (1542), Expect = e-168
Identities = 285/391 (72%), Positives = 335/391 (85%)
Frame = +2
Query: 2 GKAHLHHKAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKNIL 181
GKA L KAV+LF+RMVDEFQCK+TVKSFNSVLNVI+Q G+Y HAL+FY V+NN+ NI+
Sbjct: 184 GKARLPEKAVELFERMVDEFQCKRTVKSFNSVLNVIVQTGLYRHALDFYADVVNNR-NIM 242
Query: 182 PNVLTFNLVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVAL 361
PNVL+FNLVIK +CKL +V RA++VFREM + KCEPD YTYCTLMDGLCK+DRID+AV L
Sbjct: 243 PNVLSFNLVIKTMCKLRMVDRAMEVFREMPTWKCEPDVYTYCTLMDGLCKDDRIDEAVIL 302
Query: 362 FDEMQIEGCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGLCL 541
DEMQ+EGC P P TFNVLINGLC+KGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGLCL
Sbjct: 303 LDEMQVEGCLPVPVTFNVLINGLCRKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGLCL 362
Query: 542 KGKLDKAVSLLARMLSNKLIPNDVTYGTIINGLVKQRRAVDGVHVLMAMEERGYKENEYV 721
KGKL+KAVSL+ RM+SNK IP D+TYGTIING VKQRRA DGV +L+AM+E+G+ NEYV
Sbjct: 363 KGKLEKAVSLVDRMVSNKYIPTDITYGTIINGFVKQRRATDGVQILLAMQEKGHLANEYV 422
Query: 722 YSALISGLFKEGKSEEALNLWSKMIGKGCKPNIVVYSALIDGLCREGKPYEAEEYLFQMI 901
YSAL+SGLFKEGK EEAL +W MI KG KPN V YSA IDGLCREG+P EA+E L +M
Sbjct: 423 YSALVSGLFKEGKPEEALKIWKGMIEKGVKPNTVAYSAFIDGLCREGRPDEAKEILSEMN 482
Query: 902 NIGWSPNAFTCSSLMRGFFKVGNCDRAMLVWKEMVGKDYMDNEVCYSVLLHGLCKNGKLK 1081
+G +PNA+T SLM+G+FK G+ ++A+L+WK+M NE+CYSVL HGLC++GKLK
Sbjct: 483 KMGCTPNAYTYCSLMKGYFKTGDSNKAILLWKDMATSGITCNEICYSVLTHGLCQDGKLK 542
Query: 1082 DALMVWKHVLTKGLTPDVVAYSSMIHGLCNA 1174
+A+MVWKH+L KGL PDVVAYSSMIHGLCNA
Sbjct: 543 EAMMVWKHMLGKGLVPDVVAYSSMIHGLCNA 573
Score = 149 bits (377), Expect = 2e-33
Identities = 112/419 (26%), Positives = 188/419 (44%), Gaps = 37/419 (8%)
Frame = +2
Query: 23 KAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKNILPNVLTFN 202
+AV L D M E C +FN ++N + ++G A + D++ K +PN +T+N
Sbjct: 298 EAVILLDEMQVE-GCLPVPVTFNVLINGLCRKGDLARAAKLVDNMF--LKGCVPNEVTYN 354
Query: 203 LVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVALFDEMQIE 382
+I LC G + +A+ + M S K P TY T+++G K+ R D V + MQ +
Sbjct: 355 TLIHGLCLKGKLEKAVSLVDRMVSNKYIPTDITYGTIINGFVKQRRATDGVQILLAMQEK 414
Query: 383 GCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKA 562
G + ++ L++GL K+G A K+ M KG PN V Y+ I GLC +G+ D+A
Sbjct: 415 GHLANEYVYSALVSGLFKEGKPEEALKIWKGMIEKGVKPNTVAYSAFIDGLCREGRPDEA 474
Query: 563 VSLLARMLSNKLIPNDVTYGTIINGLVKQRRAVDGVHVLMAMEERGYKENEYVYSALISG 742
+L+ M PN TY +++ G K + + + M G NE YS L G
Sbjct: 475 KEILSEMNKMGCTPNAYTYCSLMKGYFKTGDSNKAILLWKDMATSGITCNEICYSVLTHG 534
Query: 743 LFKEGKSEEALNLWSKMIGKGCKPNIVVYSAL---------------------------- 838
L ++GK +EA+ +W M+GKG P++V YS++
Sbjct: 535 LCQDGKLKEAMMVWKHMLGKGLVPDVVAYSSMIHGLCNAGSVDQGLRLFNEMQCRGSDSQ 594
Query: 839 ---------IDGLCREGKPYEAEEYLFQMINIGWSPNAFTCSSLMRGFFKVGNCDRAMLV 991
I+ LC+ + A + L M++ G P+ TC+ ++ N
Sbjct: 595 PDVIAYNIIINALCKVDRISLAIDLLNTMLDRGCDPDTITCNIFLKTLNDKAN------- 647
Query: 992 WKEMVGKDYMDNEVCYSVLLHGLCKNGKLKDALMVWKHVLTKGLTPDVVAYSSMIHGLC 1168
G+D++D L+ L + ++ A + + +L K + P + +I LC
Sbjct: 648 -PSQDGEDFLDK------LVLQLYRRQRIVGASRIIEVMLQKIIYPKSSTWEMIIRELC 699
>ref|XP_006468575.1| PREDICTED: pentatricopeptide repeat-containing protein At4g20090-like
[Citrus sinensis]
Length = 664
Score = 580 bits (1494), Expect = e-163
Identities = 279/392 (71%), Positives = 329/392 (83%), Gaps = 1/392 (0%)
Frame = +2
Query: 2 GKAHLHHKAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKK-NI 178
GKAHL +A+ LF MVDEF CK+TVKSFNSVLNVIIQ+G+YH ALEFY+H++N K NI
Sbjct: 129 GKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI 188
Query: 179 LPNVLTFNLVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVA 358
LPN LTFNLVIK +C+LGLV AI +FREM CEPD YTYCTLMDGLCKE+R+D+AV
Sbjct: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
Query: 359 LFDEMQIEGCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGLC 538
L DEMQ++GC P+P TFNVLINGLCK G+L RAAKLVDNMFLKGC+PNEVTYNTLIHGLC
Sbjct: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
Query: 539 LKGKLDKAVSLLARMLSNKLIPNDVTYGTIINGLVKQRRAVDGVHVLMAMEERGYKENEY 718
LKG LDKAVSLL RM+++K +PN+VTYGTIINGLVK RAVDG VLM+MEER + NEY
Sbjct: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
Query: 719 VYSALISGLFKEGKSEEALNLWSKMIGKGCKPNIVVYSALIDGLCREGKPYEAEEYLFQM 898
+YS LISGLFKEGK+E+A+ LW +M+ KGCKPN VVYSALIDGLCR GKP EAEE LF+M
Sbjct: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
Query: 899 INIGWSPNAFTCSSLMRGFFKVGNCDRAMLVWKEMVGKDYMDNEVCYSVLLHGLCKNGKL 1078
IN G + NAFT SSLM+GFF+ G +A+ +WK+M + + NEVCYSVL+HGLC++GKL
Sbjct: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
Query: 1079 KDALMVWKHVLTKGLTPDVVAYSSMIHGLCNA 1174
++A MVW +L++G PDVVAYSSMIHGLCNA
Sbjct: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNA 520
Score = 162 bits (409), Expect = 3e-37
Identities = 111/414 (26%), Positives = 186/414 (44%), Gaps = 40/414 (9%)
Frame = +2
Query: 47 MVDEFQ---CKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKNILPNVLTFNLVIKA 217
++DE Q C T +FN ++N + + G A + D++ K LPN +T+N +I
Sbjct: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF--LKGCLPNEVTYNTLIHG 306
Query: 218 LCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVALFDEMQIEGCSPS 397
LC G + +A+ + M + KC P+ TY T+++GL K R D + M+ +
Sbjct: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
Query: 398 PATFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLA 577
++ LI+GL K+G A KL M KGC PN V Y+ LI GLC GK D+A +L
Sbjct: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
Query: 578 RMLSNKLIPNDVTYGTIINGLVKQRRAVDGVHVLMAMEERGYKENEYVYSALISGLFKEG 757
M++N N TY +++ G + + V + M + NE YS LI GL ++G
Sbjct: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
Query: 758 KSEEALNLWSKMIGKGCKPNIVVYSALI-------------------------------- 841
K EA +W++M+ +GCKP++V YS++I
Sbjct: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
Query: 842 -----DGLCREGKPYEAEEYLFQMINIGWSPNAFTCSSLMRGFFKVGNCDRAMLVWKEMV 1006
+ LC++ + + L M++ G P+ TC+ + + +
Sbjct: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD-------- 598
Query: 1007 GKDYMDNEVCYSVLLHGLCKNGKLKDALMVWKHVLTKGLTPDVVAYSSMIHGLC 1168
G D+++ L L K + + + +L K L+P + ++ LC
Sbjct: 599 GTDFLNE------LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
Score = 96.3 bits (238), Expect = 2e-17
Identities = 65/280 (23%), Positives = 129/280 (46%), Gaps = 3/280 (1%)
Frame = +2
Query: 26 AVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKNILPNVLTFNL 205
A+ L+ +M+++ CK ++++++ + + G A E +INN N T++
Sbjct: 386 AMKLWKQMMEK-GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN--GCAANAFTYSS 442
Query: 206 VIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVALFDEMQIEG 385
++K + G +A++++++M+ C + Y L+ GLC++ ++ +A ++ +M G
Sbjct: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
Query: 386 CSPSPATFNVLINGLCKKGDLARAAKLVDNMFL--KGCVPNEVTYNTLIHGLCLKGKLDK 559
C P ++ +I+GLC G + A KL + M P+ TYN L++ LC + +
Sbjct: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
Query: 560 AVSLLARMLSNKLIPNDVTYGTIINGLVKQRRA-VDGVHVLMAMEERGYKENEYVYSALI 736
++ LL M+ P+ VT + L ++ A DG L + R
Sbjct: 563 SIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR------------- 609
Query: 737 SGLFKEGKSEEALNLWSKMIGKGCKPNIVVYSALIDGLCR 856
LFK ++ + M+ K P + ++ LCR
Sbjct: 610 --LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
Score = 62.0 bits (149), Expect = 4e-07
Identities = 40/168 (23%), Positives = 76/168 (45%)
Frame = +2
Query: 65 CKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKNILPNVLTFNLVIKALCKLGLVSR 244
CK V +++S+++ + G AL+ ++ ++ + P+V T+N+++ ALCK +S
Sbjct: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
Query: 245 AIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVALFDEMQIEGCSPSPATFNVLIN 424
+ID+ M C+PD T C + KE ++E N L
Sbjct: 563 SIDLLNSMMDRGCDPDLVT-CNIFLTALKE-------------KLEAPQDGTDFLNELAI 608
Query: 425 GLCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVS 568
L K+ + K+V+ M K P T+ ++ LC ++ A++
Sbjct: 609 RLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
>ref|XP_006448599.1| hypothetical protein CICLE_v10014519mg [Citrus clementina]
gi|557551210|gb|ESR61839.1| hypothetical protein
CICLE_v10014519mg [Citrus clementina]
Length = 664
Score = 580 bits (1494), Expect = e-163
Identities = 281/392 (71%), Positives = 330/392 (84%), Gaps = 1/392 (0%)
Frame = +2
Query: 2 GKAHLHHKAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKK-NI 178
GKAHL +AV LF MVDEFQCK+TVKSFNSVLNVIIQ+G+YH ALEFY+H++N K NI
Sbjct: 129 GKAHLVEEAVRLFHTMVDEFQCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI 188
Query: 179 LPNVLTFNLVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVA 358
LPN LTFNLVIKA+C+LGLV AI++FREM CEPD YTYCTLMDGLCKE+R+D+AV
Sbjct: 189 LPNTLTFNLVIKAVCRLGLVDNAIELFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
Query: 359 LFDEMQIEGCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGLC 538
L DEMQ++GC P+P TFNVLINGLCK G L RAAKLVDNMFLKGC+PNEVTYNTLIHGLC
Sbjct: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGGLGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
Query: 539 LKGKLDKAVSLLARMLSNKLIPNDVTYGTIINGLVKQRRAVDGVHVLMAMEERGYKENEY 718
LKG LDKAVSLL RM+++K +PN+VTYGTIINGLVK RAVDG VLM+MEER + NEY
Sbjct: 309 LKGDLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
Query: 719 VYSALISGLFKEGKSEEALNLWSKMIGKGCKPNIVVYSALIDGLCREGKPYEAEEYLFQM 898
+YS LISGLFKEGK+E+A+ LW +M+ KGCKPN VVYSALIDGLCR GKP EAEE L +M
Sbjct: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILSEM 428
Query: 899 INIGWSPNAFTCSSLMRGFFKVGNCDRAMLVWKEMVGKDYMDNEVCYSVLLHGLCKNGKL 1078
IN G + NAFT SSLM+GFF+ G +A+ +WK+M + + NEVCYSVL+HGLC++GKL
Sbjct: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
Query: 1079 KDALMVWKHVLTKGLTPDVVAYSSMIHGLCNA 1174
++A MVW +L++G PDVVAYSSMIHGLCNA
Sbjct: 489 REARMVWTQMLSRGYKPDVVAYSSMIHGLCNA 520
Score = 161 bits (407), Expect = 5e-37
Identities = 94/307 (30%), Positives = 159/307 (51%), Gaps = 2/307 (0%)
Frame = +2
Query: 23 KAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKNILPNVLTFN 202
+A L D M + C ++N++++ + +G A+ D ++ +K +PN +T+
Sbjct: 280 RAAKLVDNMFLK-GCLPNEVTYNTLIHGLCLKGDLDKAVSLLDRMVASK--CMPNEVTYG 336
Query: 203 LVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVALFDEMQIE 382
+I L KLG V M K + Y Y TL+ GL KE + +DA+ L+ +M +
Sbjct: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
Query: 383 GCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKA 562
GC P+ ++ LI+GLC+ G A +++ M GC N TY++L+ G GK KA
Sbjct: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILSEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
Query: 563 VSLLARMLSNKLIPNDVTYGTIINGLVKQRRAVDGVHVLMAMEERGYKENEYVYSALISG 742
V + M N + N+V Y +I+GL + + + V M RGYK + YS++I G
Sbjct: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGYKPDVVAYSSMIHG 516
Query: 743 LFKEGKSEEALNLWSKMIGKGCK--PNIVVYSALIDGLCREGKPYEAEEYLFQMINIGWS 916
L G EEAL L+++M+ K P++ Y+ L++ LC++ + + L M++ G
Sbjct: 517 LCNAGSLEEALKLFNEMLCPEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
Query: 917 PNAFTCS 937
P+ TC+
Sbjct: 577 PDLVTCN 583
Score = 92.8 bits (229), Expect = 2e-16
Identities = 65/280 (23%), Positives = 126/280 (45%), Gaps = 3/280 (1%)
Frame = +2
Query: 26 AVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKNILPNVLTFNL 205
A+ L+ +M+++ CK ++++++ + + G A E +INN N T++
Sbjct: 386 AMKLWKQMMEK-GCKPNTVVYSALIDGLCRVGKPDEAEEILSEMINN--GCAANAFTYSS 442
Query: 206 VIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVALFDEMQIEG 385
++K + G +A++++++M+ C + Y L+ GLC++ ++ +A ++ +M G
Sbjct: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
Query: 386 CSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKG--CVPNEVTYNTLIHGLCLKGKLDK 559
P ++ +I+GLC G L A KL + M P+ TYN L++ LC + +
Sbjct: 503 YKPDVVAYSSMIHGLCNAGSLEEALKLFNEMLCPEPKSQPDVFTYNILLNALCKQSNISH 562
Query: 560 AVSLLARMLSNKLIPNDVTYGTIINGL-VKQRRAVDGVHVLMAMEERGYKENEYVYSALI 736
++ LL M+ P+ VT + L K DG L + R
Sbjct: 563 SIDLLNSMMDRGCDPDLVTCNIFLTALKEKLETPQDGTDFLNELAIR------------- 609
Query: 737 SGLFKEGKSEEALNLWSKMIGKGCKPNIVVYSALIDGLCR 856
LFK ++ + M+ K P + ++ LCR
Sbjct: 610 --LFKRQRTSGGFKIVEVMLQKFLPPKTSTWERVVQELCR 647
Score = 58.2 bits (139), Expect = 6e-06
Identities = 39/167 (23%), Positives = 75/167 (44%)
Frame = +2
Query: 68 KQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKNILPNVLTFNLVIKALCKLGLVSRA 247
K V +++S+++ + G AL+ ++ ++ + P+V T+N+++ ALCK +S +
Sbjct: 504 KPDVVAYSSMIHGLCNAGSLEEALKLFNEMLCPEPKSQPDVFTYNILLNALCKQSNISHS 563
Query: 248 IDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVALFDEMQIEGCSPSPATFNVLING 427
ID+ M C+PD T C + KE ++E N L
Sbjct: 564 IDLLNSMMDRGCDPDLVT-CNIFLTALKE-------------KLETPQDGTDFLNELAIR 609
Query: 428 LCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVS 568
L K+ + K+V+ M K P T+ ++ LC ++ A++
Sbjct: 610 LFKRQRTSGGFKIVEVMLQKFLPPKTSTWERVVQELCRPKRIQAAIN 656
>ref|XP_004295517.1| PREDICTED: pentatricopeptide repeat-containing protein At4g20090-like
[Fragaria vesca subsp. vesca]
Length = 647
Score = 577 bits (1487), Expect = e-162
Identities = 273/391 (69%), Positives = 328/391 (83%), Gaps = 1/391 (0%)
Frame = +2
Query: 2 GKAHLHHKAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKK-NI 178
GKAHL ++AVDLF RMVDEFQC++TVKSFNSVLNVI+Q+G Y HALEFYDHV+ ++ NI
Sbjct: 112 GKAHLPNQAVDLFHRMVDEFQCRRTVKSFNSVLNVIVQEGHYAHALEFYDHVVGDRSMNI 171
Query: 179 LPNVLTFNLVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVA 358
PNVL++NL+IKALC+ GLV +A++ FREM C PD +TYCTLMDGLCK +R+D+AV
Sbjct: 172 SPNVLSYNLIIKALCRFGLVDKAVEKFREMPVRDCAPDVFTYCTLMDGLCKVNRVDEAVF 231
Query: 359 LFDEMQIEGCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGLC 538
L DEMQIEGCSPSPA FNVLI+ +CKKGDL RAAKLVDNMFLKGCVPNEVTYNTLIHGLC
Sbjct: 232 LLDEMQIEGCSPSPAAFNVLIDAVCKKGDLGRAAKLVDNMFLKGCVPNEVTYNTLIHGLC 291
Query: 539 LKGKLDKAVSLLARMLSNKLIPNDVTYGTIINGLVKQRRAVDGVHVLMAMEERGYKENEY 718
L+GKL+KA+SLL RM+ NK +PNDVTYGTIINGLVKQ R++DGV VL++MEERG + NEY
Sbjct: 292 LQGKLEKAISLLDRMVLNKCVPNDVTYGTIINGLVKQGRSLDGVRVLISMEERGRRANEY 351
Query: 719 VYSALISGLFKEGKSEEALNLWSKMIGKGCKPNIVVYSALIDGLCREGKPYEAEEYLFQM 898
+YS L+SGLFKEGKSEEA+ LW +M+ KGCKPN VVYSALIDGLC +GKP EA+E +M
Sbjct: 352 IYSVLVSGLFKEGKSEEAMKLWKEMMEKGCKPNTVVYSALIDGLCLDGKPDEAKEVFCEM 411
Query: 899 INIGWSPNAFTCSSLMRGFFKVGNCDRAMLVWKEMVGKDYMDNEVCYSVLLHGLCKNGKL 1078
+ G PN++ SSLMRGFF+ G +A+L+WKEM + + NEVCYSV++ G CK GK+
Sbjct: 412 VRNGCMPNSYAYSSLMRGFFRTGQSQKAILLWKEMAANNVVRNEVCYSVIIDGFCKEGKV 471
Query: 1079 KDALMVWKHVLTKGLTPDVVAYSSMIHGLCN 1171
K+ALMVWK +L +G DVVAYSSMIHGLCN
Sbjct: 472 KEALMVWKQILARGYKLDVVAYSSMIHGLCN 502
Score = 167 bits (422), Expect = 1e-38
Identities = 111/419 (26%), Positives = 193/419 (46%), Gaps = 37/419 (8%)
Frame = +2
Query: 23 KAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKNILPNVLTFN 202
+AV L D M E C + +FN +++ + ++G A + D++ K +PN +T+N
Sbjct: 228 EAVFLLDEMQIE-GCSPSPAAFNVLIDAVCKKGDLGRAAKLVDNMF--LKGCVPNEVTYN 284
Query: 203 LVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVALFDEMQIE 382
+I LC G + +AI + M KC P+ TY T+++GL K+ R D V + M+
Sbjct: 285 TLIHGLCLQGKLEKAISLLDRMVLNKCVPNDVTYGTIINGLVKQGRSLDGVRVLISMEER 344
Query: 383 GCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKA 562
G + ++VL++GL K+G A KL M KGC PN V Y+ LI GLCL GK D+A
Sbjct: 345 GRRANEYIYSVLVSGLFKEGKSEEAMKLWKEMMEKGCKPNTVVYSALIDGLCLDGKPDEA 404
Query: 563 VSLLARMLSNKLIPNDVTYGTIINGLVKQRRAVDGVHVLMAMEERGYKENEYVYSALISG 742
+ M+ N +PN Y +++ G + ++ + + M NE YS +I G
Sbjct: 405 KEVFCEMVRNGCMPNSYAYSSLMRGFFRTGQSQKAILLWKEMAANNVVRNEVCYSVIIDG 464
Query: 743 LFKEGKSEEALNLWSKMIGKG-------------------------------------CK 811
KEGK +EAL +W +++ +G C+
Sbjct: 465 FCKEGKVKEALMVWKQILARGYKLDVVAYSSMIHGLCNDGLVEQGLKLFNDMLSQEPECQ 524
Query: 812 PNIVVYSALIDGLCREGKPYEAEEYLFQMINIGWSPNAFTCSSLMRGFFKVGNCDRAMLV 991
P+++ Y+ L++ LC++ A + L M++ G P+ TC + +
Sbjct: 525 PDVITYNILLNALCKQHTISRAIDLLNSMLDHGCDPDLVTCDIFLTTL--------GEKL 576
Query: 992 WKEMVGKDYMDNEVCYSVLLHGLCKNGKLKDALMVWKHVLTKGLTPDVVAYSSMIHGLC 1168
G+++++ L+ L K + A + + +L K L P +++++ LC
Sbjct: 577 DPPQDGREFLNE------LVVRLFKRQRTVGAFRIVEVMLKKFLPPTACTWTTVVQELC 629
Score = 91.7 bits (226), Expect = 5e-16
Identities = 64/284 (22%), Positives = 135/284 (47%), Gaps = 3/284 (1%)
Frame = +2
Query: 23 KAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKNILPNVLTFN 202
+A+ L+ M+++ CK ++++++ + G A E + ++ N +PN ++
Sbjct: 368 EAMKLWKEMMEK-GCKPNTVVYSALIDGLCLDGKPDEAKEVFCEMVRN--GCMPNSYAYS 424
Query: 203 LVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVALFDEMQIE 382
+++ + G +AI +++EM++ + Y ++DG CKE ++ +A+ ++ ++
Sbjct: 425 SLMRGFFRTGQSQKAILLWKEMAANNVVRNEVCYSVIIDGFCKEGKVKEALMVWKQILAR 484
Query: 383 GCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKG--CVPNEVTYNTLIHGLCLKGKLD 556
G ++ +I+GLC G + + KL ++M + C P+ +TYN L++ LC + +
Sbjct: 485 GYKLDVVAYSSMIHGLCNDGLVEQGLKLFNDMLSQEPECQPDVITYNILLNALCKQHTIS 544
Query: 557 KAVSLLARMLSNKLIPNDVTYGTIINGL-VKQRRAVDGVHVLMAMEERGYKENEYVYSAL 733
+A+ LL ML + P+ VT + L K DG L + L
Sbjct: 545 RAIDLLNSMLDHGCDPDLVTCDIFLTTLGEKLDPPQDGREFL---------------NEL 589
Query: 734 ISGLFKEGKSEEALNLWSKMIGKGCKPNIVVYSALIDGLCREGK 865
+ LFK ++ A + M+ K P ++ ++ LC+ K
Sbjct: 590 VVRLFKRQRTVGAFRIVEVMLKKFLPPTACTWTTVVQELCKPKK 633
Score = 63.2 bits (152), Expect = 2e-07
Identities = 39/166 (23%), Positives = 78/166 (46%)
Frame = +2
Query: 68 KQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKNILPNVLTFNLVIKALCKLGLVSRA 247
K V +++S+++ + G+ L+ ++ +++ + P+V+T+N+++ ALCK +SRA
Sbjct: 487 KLDVVAYSSMIHGLCNDGLVEQGLKLFNDMLSQEPECQPDVITYNILLNALCKQHTISRA 546
Query: 248 IDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVALFDEMQIEGCSPSPATFNVLING 427
ID+ M C+PD T + L + +++ N L+
Sbjct: 547 IDLLNSMLDHGCDPDLVTCDIFLTTLGE--------------KLDPPQDGREFLNELVVR 592
Query: 428 LCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAV 565
L K+ A ++V+ M K P T+ T++ LC K+ A+
Sbjct: 593 LFKRQRTVGAFRIVEVMLKKFLPPTACTWTTVVQELCKPKKVRAAI 638
>ref|XP_002297917.1| hypothetical protein POPTR_0001s12190g [Populus trichocarpa]
gi|222845175|gb|EEE82722.1| hypothetical protein
POPTR_0001s12190g [Populus trichocarpa]
Length = 670
Score = 575 bits (1481), Expect = e-161
Identities = 282/389 (72%), Positives = 330/389 (84%), Gaps = 1/389 (0%)
Frame = +2
Query: 2 GKAHLHHKAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKK-NI 178
GKAHL KAVDLFDRM EF+CK+T KSFNSVLNVIIQ+G++H ALEFY+HVI K +I
Sbjct: 136 GKAHLPEKAVDLFDRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSI 195
Query: 179 LPNVLTFNLVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVA 358
PNVLTFNLVIKA+CK+GLV AI VFR+M+ KCEPD YTYCTLMDGLCK DRID+AV+
Sbjct: 196 SPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVS 255
Query: 359 LFDEMQIEGCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGLC 538
L DEMQI+GC PSP TFNVLINGLCKKGDL+RAAKLVDNMFLKGC+PNEVTYNTLIHGLC
Sbjct: 256 LLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLC 315
Query: 539 LKGKLDKAVSLLARMLSNKLIPNDVTYGTIINGLVKQRRAVDGVHVLMAMEERGYKENEY 718
LKGKL+KA+SLL RM+S+K +PN VTYGTIINGLVKQ RA+DG VL MEERGY NEY
Sbjct: 316 LKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEY 375
Query: 719 VYSALISGLFKEGKSEEALNLWSKMIGKGCKPNIVVYSALIDGLCREGKPYEAEEYLFQM 898
VYS LISGLFKEGKS+EA++L+ +M KG + N +VYSA+IDGLCR+GKP +A E L +M
Sbjct: 376 VYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEM 435
Query: 899 INIGWSPNAFTCSSLMRGFFKVGNCDRAMLVWKEMVGKDYMDNEVCYSVLLHGLCKNGKL 1078
N G +PNA+TCSSLM+GFF+ GN RA+ VWK+M ++ NEVCYSVL+HGLCK+GK+
Sbjct: 436 TNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKV 495
Query: 1079 KDALMVWKHVLTKGLTPDVVAYSSMIHGL 1165
K+A+MVW +L KG PDVVAYSSMI+GL
Sbjct: 496 KEAMMVWTQMLGKGCKPDVVAYSSMINGL 524
Score = 169 bits (428), Expect = 2e-39
Identities = 120/428 (28%), Positives = 200/428 (46%), Gaps = 40/428 (9%)
Frame = +2
Query: 5 KAHLHHKAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKNILP 184
KA +AV L D M + C + +FN ++N + ++G A + D++ K +P
Sbjct: 246 KADRIDEAVSLLDEMQID-GCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMF--LKGCIP 302
Query: 185 NVLTFNLVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVALF 364
N +T+N +I LC G + +AI + M S KC P+ TY T+++GL K+ R D +
Sbjct: 303 NEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVL 362
Query: 365 DEMQIEGCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGLCLK 544
M+ G + ++ LI+GL K+G A L M +KG N + Y+ +I GLC
Sbjct: 363 ALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRD 422
Query: 545 GKLDKAVSLLARMLSNKLIPNDVTYGTIINGLVKQRRAVDGVHVLMAMEERGYKENEYVY 724
GK D AV +L+ M + PN T +++ G + + V V M + + +NE Y
Sbjct: 423 GKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCY 482
Query: 725 SALISGLFKEGKSEEALNLWSKMIGKGCKPNIVV-------------------------- 826
S LI GL K+GK +EA+ +W++M+GKGCKP++V
Sbjct: 483 SVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLC 542
Query: 827 -----------YSALIDGLCREGKPYEAEEYLFQMINIGWSPNAFTCSSLMRGFFKVGNC 973
Y+ L++ LC++ A + L M++ G P+ TC+ +R
Sbjct: 543 QGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLR-------- 594
Query: 974 DRAMLVWK---EMVGKDYMDNEVCYSVLLHGLCKNGKLKDALMVWKHVLTKGLTPDVVAY 1144
ML K G++++D L+ L K ++ A + + +L K L P +
Sbjct: 595 ---MLREKLDPPQDGREFLDE------LVVRLLKRQRVLGASKIVEVMLQKLLPPKHSTW 645
Query: 1145 SSMIHGLC 1168
+ ++ LC
Sbjct: 646 ARVVENLC 653
Score = 106 bits (264), Expect = 2e-20
Identities = 70/259 (27%), Positives = 128/259 (49%), Gaps = 4/259 (1%)
Frame = +2
Query: 401 ATFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLAR 580
+TF LIN GD K++D M + V E + + +KAV L R
Sbjct: 91 STFYSLINNYANLGDFKSLEKVLDRMKCEKRVIFEKCFIVIFKAYGKAHLPEKAVDLFDR 150
Query: 581 MLSN-KLIPNDVTYGTIINGLVKQ---RRAVDGVHVLMAMEERGYKENEYVYSALISGLF 748
M + ++ +++N ++++ RA++ + ++ + N ++ +I +
Sbjct: 151 MACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMC 210
Query: 749 KEGKSEEALNLWSKMIGKGCKPNIVVYSALIDGLCREGKPYEAEEYLFQMINIGWSPNAF 928
K G ++A+ ++ M + C+P++ Y L+DGLC+ + EA L +M G P+
Sbjct: 211 KVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPV 270
Query: 929 TCSSLMRGFFKVGNCDRAMLVWKEMVGKDYMDNEVCYSVLLHGLCKNGKLKDALMVWKHV 1108
T + L+ G K G+ RA + M K + NEV Y+ L+HGLC GKL+ A+ + +
Sbjct: 271 TFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRM 330
Query: 1109 LTKGLTPDVVAYSSMIHGL 1165
++ P+VV Y ++I+GL
Sbjct: 331 VSSKCVPNVVTYGTIINGL 349
Score = 70.9 bits (172), Expect = 1e-09
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 2/169 (1%)
Frame = +2
Query: 65 CKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKNILPNVLTFNLVIKALCKLGLVSR 244
CK V +++S++N + G+ A++ Y+ ++ + P+V+T+N+++ LCK +SR
Sbjct: 510 CKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISR 569
Query: 245 AIDVFREMSSLKCEPDAYTYCTLMDGLCKE--DRIDDAVALFDEMQIEGCSPSPATFNVL 418
AID+ M C+PD T CT+ + +E D D DE+ +
Sbjct: 570 AIDLLNSMLDRGCDPDLVT-CTIFLRMLREKLDPPQDGREFLDELVVR------------ 616
Query: 419 INGLCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAV 565
L K+ + A+K+V+ M K P T+ ++ LC K+ +
Sbjct: 617 ---LLKRQRVLGASKIVEVMLQKLLPPKHSTWARVVENLCKPKKVQAVI 662
>gb|EOX96827.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma cacao]
Length = 636
Score = 573 bits (1477), Expect = e-161
Identities = 279/392 (71%), Positives = 323/392 (82%), Gaps = 1/392 (0%)
Frame = +2
Query: 2 GKAHLHHKAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKK-NI 178
G+AHL KAVDLF RM EF CK TVKSFNSVLNVIIQ+G YH A +FY+ ++ K NI
Sbjct: 101 GRAHLPEKAVDLFHRMPHEFHCKPTVKSFNSVLNVIIQEGFYHRAFDFYNCSVSAKNTNI 160
Query: 179 LPNVLTFNLVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVA 358
PNVLTFNL++KA+CKLG V RAI+VFREM KC PD YTYCTLMDGLCKEDRID+AV+
Sbjct: 161 SPNVLTFNLLLKAMCKLGWVDRAIEVFREMPLRKCAPDVYTYCTLMDGLCKEDRIDEAVS 220
Query: 359 LFDEMQIEGCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGLC 538
L DEMQ EGC P+P TFNVLINGLCKKGDLARAAKLVDNMFLKGC+PN+VTYNTLIHGLC
Sbjct: 221 LLDEMQTEGCFPTPVTFNVLINGLCKKGDLARAAKLVDNMFLKGCLPNQVTYNTLIHGLC 280
Query: 539 LKGKLDKAVSLLARMLSNKLIPNDVTYGTIINGLVKQRRAVDGVHVLMAMEERGYKENEY 718
LKGKLDKAV LL RM+S+ IPND+TYGTI+NGLVKQ R D V ++++MEERGY NEY
Sbjct: 281 LKGKLDKAVILLDRMVSSNCIPNDITYGTIVNGLVKQGRVEDAVMLVVSMEERGYGVNEY 340
Query: 719 VYSALISGLFKEGKSEEALNLWSKMIGKGCKPNIVVYSALIDGLCREGKPYEAEEYLFQM 898
VYSALISGLFK GKSEEA+ W++M+ KG KPN VVYS+LIDGLCREGKP EAEE L +M
Sbjct: 341 VYSALISGLFKGGKSEEAMKRWTEMMEKGYKPNTVVYSSLIDGLCREGKPNEAEEVLSEM 400
Query: 899 INIGWSPNAFTCSSLMRGFFKVGNCDRAMLVWKEMVGKDYMDNEVCYSVLLHGLCKNGKL 1078
I G PNA+T SSLM+GFFK GNC +A+ VWK+M + ++VCYSVL+HGLC++G L
Sbjct: 401 IEKGCIPNAYTYSSLMKGFFKTGNCHKAVQVWKDMAEHKCIHSQVCYSVLIHGLCEDGNL 460
Query: 1079 KDALMVWKHVLTKGLTPDVVAYSSMIHGLCNA 1174
+A+M W+H+L KG PD VAYSSMI GLCNA
Sbjct: 461 SEAMMAWRHMLDKGCKPDAVAYSSMIQGLCNA 492
Score = 113 bits (283), Expect = 1e-22
Identities = 87/337 (25%), Positives = 146/337 (43%), Gaps = 56/337 (16%)
Frame = +2
Query: 23 KAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEF---------------YDHV 157
KAV L DRMV C ++ +++N +++QG A+ Y +
Sbjct: 287 KAVILLDRMVSS-NCIPNDITYGTIVNGLVKQGRVEDAVMLVVSMEERGYGVNEYVYSAL 345
Query: 158 INN------------------KKNILPNVLTFNLVIKALCKLGLVSRAIDVFREMSSLKC 283
I+ +K PN + ++ +I LC+ G + A +V EM C
Sbjct: 346 ISGLFKGGKSEEAMKRWTEMMEKGYKPNTVVYSSLIDGLCREGKPNEAEEVLSEMIEKGC 405
Query: 284 EPDAYTYCTLMDGLCKEDRIDDAVALFDEMQIEGCSPSPATFNVLINGLCKKGDLARAAK 463
P+AYTY +LM G K AV ++ +M C S ++VLI+GLC+ G+L+ A
Sbjct: 406 IPNAYTYSSLMKGFFKTGNCHKAVQVWKDMAEHKCIHSQVCYSVLIHGLCEDGNLSEAMM 465
Query: 464 LVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLARMLSNKLI--PNDVTYGTIING 637
+M KGC P+ V Y+++I GLC G L++A+ L ML + P+ +TY + N
Sbjct: 466 AWRHMLDKGCKPDAVAYSSMIQGLCNAGSLEEALKLFNEMLYQEAESQPDVITYNILFNA 525
Query: 638 LVKQRRAVDGVHVLMAMEERGY---------------------KENEYVYSALISGLFKE 754
L Q+ V +L +M ++ ++ L+ LFK
Sbjct: 526 LCNQKSISHAVDLLNSMLDQACDPDIATCNIFLRTLREKVDPPQDGREFLDELVIRLFKR 585
Query: 755 GKSEEALNLWSKMIGKGCKPNIVVYSALIDGLCREGK 865
+ A + M+ K P ++ +++ LC+ K
Sbjct: 586 QRVFGASKIVQVMLQKFLPPKASTWARVVEELCKPKK 622
Score = 73.2 bits (178), Expect = 2e-10
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 23/205 (11%)
Frame = +2
Query: 20 HKAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKNILPNVLTF 199
HKAV ++ M E +C + ++ +++ + + G A+ + H+++ K P+ + +
Sbjct: 426 HKAVQVWKDMA-EHKCIHSQVCYSVLIHGLCEDGNLSEAMMAWRHMLD--KGCKPDAVAY 482
Query: 200 NLVIKALCKLGLVSRAIDVFREM--SSLKCEPDAYTYCTLMDGLCKEDRIDDAVALFDEM 373
+ +I+ LC G + A+ +F EM + +PD TY L + LC + I AV L + M
Sbjct: 483 SSMIQGLCNAGSLEEALKLFNEMLYQEAESQPDVITYNILFNALCNQKSISHAVDLLNSM 542
Query: 374 QIEGCSPSPATFNVLINGLCKKGD---------------------LARAAKLVDNMFLKG 490
+ C P AT N+ + L +K D + A+K+V M K
Sbjct: 543 LDQACDPDIATCNIFLRTLREKVDPPQDGREFLDELVIRLFKRQRVFGASKIVQVMLQKF 602
Query: 491 CVPNEVTYNTLIHGLCLKGKLDKAV 565
P T+ ++ LC K+ A+
Sbjct: 603 LPPKASTWARVVEELCKPKKIQAAI 627
>gb|EMJ12567.1| hypothetical protein PRUPE_ppa002507mg [Prunus persica]
Length = 664
Score = 573 bits (1476), Expect = e-161
Identities = 279/392 (71%), Positives = 323/392 (82%), Gaps = 1/392 (0%)
Frame = +2
Query: 2 GKAHLHHKAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNK-KNI 178
GKAHL +KAV+LF RMVDEFQC++TVKSFNSVLNVIIQ+G Y HALEFY HV+ NI
Sbjct: 131 GKAHLPNKAVELFYRMVDEFQCRRTVKSFNSVLNVIIQEGHYSHALEFYSHVVGTTGMNI 190
Query: 179 LPNVLTFNLVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVA 358
PNVL+FNL+IK++CKLGLV RA+ VFREM C PD +TY TLMDGLCKE RID+AV
Sbjct: 191 SPNVLSFNLIIKSMCKLGLVDRAVQVFREMPLRNCTPDVFTYSTLMDGLCKEKRIDEAVF 250
Query: 359 LFDEMQIEGCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGLC 538
L DEMQ+EGC PSP TFNVLIN LCKKGDL RAAKLVDNM LKGCVPNEVTYNTLIHGLC
Sbjct: 251 LLDEMQLEGCIPSPVTFNVLINALCKKGDLGRAAKLVDNMLLKGCVPNEVTYNTLIHGLC 310
Query: 539 LKGKLDKAVSLLARMLSNKLIPNDVTYGTIINGLVKQRRAVDGVHVLMAMEERGYKENEY 718
LKGKL KAVSLL RM+SNK +PNDVTYGTIINGLVK+ RAVDG VLM+MEERG NEY
Sbjct: 311 LKGKLAKAVSLLDRMVSNKCVPNDVTYGTIINGLVKRGRAVDGARVLMSMEERGNHANEY 370
Query: 719 VYSALISGLFKEGKSEEALNLWSKMIGKGCKPNIVVYSALIDGLCREGKPYEAEEYLFQM 898
+YS L+SGLFKEGKSE+A+ LW +M+ KGCKPN + YS LI+GLC EGKP EA+E +M
Sbjct: 371 IYSVLVSGLFKEGKSEDAMRLWKEMLEKGCKPNTIAYSTLINGLCGEGKPDEAKEVFSEM 430
Query: 899 INIGWSPNAFTCSSLMRGFFKVGNCDRAMLVWKEMVGKDYMDNEVCYSVLLHGLCKNGKL 1078
++ G PN+FT SSLMRGFF+ G +A+L+WKEM M NEVCYSVL+HGLC++G+L
Sbjct: 431 VSNGCMPNSFTYSSLMRGFFQTGQSQKAILLWKEMANN--MRNEVCYSVLIHGLCEDGQL 488
Query: 1079 KDALMVWKHVLTKGLTPDVVAYSSMIHGLCNA 1174
+AL+ W+ +L +G PDVVAYSSMIHGLCNA
Sbjct: 489 NEALIAWQQMLGRGYKPDVVAYSSMIHGLCNA 520
Score = 180 bits (456), Expect = 1e-42
Identities = 117/408 (28%), Positives = 202/408 (49%), Gaps = 26/408 (6%)
Frame = +2
Query: 23 KAVDLFDRMVDEFQCKQTVKS---FNSVLNVIIQQGVYHHALEFYDHVINNKKNILPNVL 193
K +D ++DE Q + + S FN ++N + ++G A + D+++ K +PN +
Sbjct: 243 KRIDEAVFLLDEMQLEGCIPSPVTFNVLINALCKKGDLGRAAKLVDNML--LKGCVPNEV 300
Query: 194 TFNLVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVALFDEM 373
T+N +I LC G +++A+ + M S KC P+ TY T+++GL K R D + M
Sbjct: 301 TYNTLIHGLCLKGKLAKAVSLLDRMVSNKCVPNDVTYGTIINGLVKRGRAVDGARVLMSM 360
Query: 374 QIEGCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL 553
+ G + ++VL++GL K+G A +L M KGC PN + Y+TLI+GLC +GK
Sbjct: 361 EERGNHANEYIYSVLVSGLFKEGKSEDAMRLWKEMLEKGCKPNTIAYSTLINGLCGEGKP 420
Query: 554 DKAVSLLARMLSNKLIPNDVTYGTIINGLVKQRRAVDGVHVLMAMEERGYKENEYVYSAL 733
D+A + + M+SN +PN TY +++ G + ++ + L+ E NE YS L
Sbjct: 421 DEAKEVFSEMVSNGCMPNSFTYSSLMRGFFQTGQSQKAI--LLWKEMANNMRNEVCYSVL 478
Query: 734 ISGLFKEGKSEEALNLWSKMIGKGCKPNIVVYSALIDGLCREGKPYEAEEYLFQMI--NI 907
I GL ++G+ EAL W +M+G+G KP++V YS++I GLC G + + +M+
Sbjct: 479 IHGLCEDGQLNEALIAWQQMLGRGYKPDVVAYSSMIHGLCNAGLVEQGLKLFNEMLCQEP 538
Query: 908 GWSPNAFTCSSLMRGFFKVGNCDRAMLVWKEMVGKDYMDNEVCYSVLLHG---------- 1057
P+ T + L F K + A+ M+ + + V + L
Sbjct: 539 ECQPDVITYNILFNVFCKQSSISLAIDHLNRMLDRGCDPDSVTCDIFLRSLRERLDPPQD 598
Query: 1058 -----------LCKNGKLKDALMVWKHVLTKGLTPDVVAYSSMIHGLC 1168
L K ++ A ++ + +L K L P ++ ++ LC
Sbjct: 599 GREFLNELVVRLFKQQRIVGASIIVEVMLQKFLPPKASTWTRVVQELC 646
Score = 97.8 bits (242), Expect = 7e-18
Identities = 63/269 (23%), Positives = 137/269 (50%), Gaps = 3/269 (1%)
Frame = +2
Query: 26 AVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKNILPNVLTFNL 205
A+ L+ M+++ CK ++++++N + +G A E + +++N +PN T++
Sbjct: 388 AMRLWKEMLEK-GCKPNTIAYSTLINGLCGEGKPDEAKEVFSEMVSN--GCMPNSFTYSS 444
Query: 206 VIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVALFDEMQIEG 385
+++ + G +AI +++EM++ + Y L+ GLC++ ++++A+ + +M G
Sbjct: 445 LMRGFFQTGQSQKAILLWKEMANNM--RNEVCYSVLIHGLCEDGQLNEALIAWQQMLGRG 502
Query: 386 CSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKG--CVPNEVTYNTLIHGLCLKGKLDK 559
P ++ +I+GLC G + + KL + M + C P+ +TYN L + C + +
Sbjct: 503 YKPDVVAYSSMIHGLCNAGLVEQGLKLFNEMLCQEPECQPDVITYNILFNVFCKQSSISL 562
Query: 560 AVSLLARMLSNKLIPNDVTYGTIINGLVKQRRAV-DGVHVLMAMEERGYKENEYVYSALI 736
A+ L RML P+ VT + L ++ DG L + R +K+ V +++I
Sbjct: 563 AIDHLNRMLDRGCDPDSVTCDIFLRSLRERLDPPQDGREFLNELVVRLFKQQRIVGASII 622
Query: 737 SGLFKEGKSEEALNLWSKMIGKGCKPNIV 823
+ + + W++++ + CKP +V
Sbjct: 623 VEVMLQKFLPPKASTWTRVVQELCKPKMV 651
>ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata
subsp. lyrata]
Length = 658
Score = 568 bits (1464), Expect = e-159
Identities = 278/391 (71%), Positives = 322/391 (82%), Gaps = 2/391 (0%)
Frame = +2
Query: 2 GKAHLHHKAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKN-- 175
GKAHL KAVDLF RMVDEF+CK++VKSFNSVLNVII +G+YH LEFYD+V+N+ N
Sbjct: 123 GKAHLPEKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMN 182
Query: 176 ILPNVLTFNLVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAV 355
I PN L+FNLVIKALCKLG V RAI+VFR M KC PD YTYCTLMDGLCKE+RID+AV
Sbjct: 183 ISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 356 ALFDEMQIEGCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGL 535
L DEMQ EGCSPSP +NVLI+GLCKKGDL+R KLVDNMFLKGC PNEVTYNTLIHGL
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGL 302
Query: 536 CLKGKLDKAVSLLARMLSNKLIPNDVTYGTIINGLVKQRRAVDGVHVLMAMEERGYKENE 715
CLKGKLDKAVSLL RM+S+K IPNDVTYGT+INGLVKQRRA+DG +L++MEERGY+ N+
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQ 362
Query: 716 YVYSALISGLFKEGKSEEALNLWSKMIGKGCKPNIVVYSALIDGLCREGKPYEAEEYLFQ 895
++YS LISGLFKEGK+EEA+ LW KM KGC+PNIVVYSA+IDGLCREGKP EA+E L
Sbjct: 363 HIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNG 422
Query: 896 MINIGWSPNAFTCSSLMRGFFKVGNCDRAMLVWKEMVGKDYMDNEVCYSVLLHGLCKNGK 1075
MI+ G PN +T SSLM+GFFK G + A+ VW+EM NE CYSVL+ GLC G+
Sbjct: 423 MISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGR 482
Query: 1076 LKDALMVWKHVLTKGLTPDVVAYSSMIHGLC 1168
+K+A+MVW +LT G+ PD VAYSSMI GLC
Sbjct: 483 VKEAMMVWSKMLTIGIKPDTVAYSSMIKGLC 513
Score = 174 bits (441), Expect = 6e-41
Identities = 119/421 (28%), Positives = 196/421 (46%), Gaps = 39/421 (9%)
Frame = +2
Query: 23 KAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKNILPNVLTFN 202
+AV L D M E C + +N +++ + ++G + D++ K PN +T+N
Sbjct: 240 EAVLLLDEMQSE-GCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMF--LKGCFPNEVTYN 296
Query: 203 LVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVALFDEMQIE 382
+I LC G + +A+ + M S KC P+ TY TL++GL K+ R D L M+
Sbjct: 297 TLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEER 356
Query: 383 GCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKA 562
G + ++VLI+GL K+G A L M KGC PN V Y+ +I GLC +GK ++A
Sbjct: 357 GYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEA 416
Query: 563 VSLLARMLSNKLIPNDVTYGTIINGLVKQRRAVDGVHVLMAMEERGYKENEYVYSALISG 742
+L M+S+ +PN TY +++ G K + + + V M+E G NE+ YS LI G
Sbjct: 417 KEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDG 476
Query: 743 LFKEGKSEEALNLWSKMIGKGCKPNIVVYSA----------------------------- 835
L G+ +EA+ +WSKM+ G KP+ V YS+
Sbjct: 477 LCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKS 536
Query: 836 ---------LIDGLCREGKPYEAEEYLFQMINIGWSPNAFTCSSLMRGFF-KVGNCDRAM 985
L+DGLC + A + L M++ G P+ TC++ + K +C+
Sbjct: 537 QPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSDSCEEGR 596
Query: 986 LVWKEMVGKDYMDNEVCYSVLLHGLCKNGKLKDALMVWKHVLTKGLTPDVVAYSSMIHGL 1165
+E+V + L K ++ A + + +L K L P ++ ++ +
Sbjct: 597 SFLEELVAR---------------LLKRQRVSGACKIVEVMLGKYLAPKTSTWAMIVPEI 641
Query: 1166 C 1168
C
Sbjct: 642 C 642
Score = 121 bits (304), Expect = 5e-25
Identities = 81/291 (27%), Positives = 146/291 (50%), Gaps = 3/291 (1%)
Frame = +2
Query: 2 GKAHLHHKAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKNIL 181
GKA +A+ L+ +M ++ C+ + +++V++ + ++G + A E + +I++ L
Sbjct: 376 GKAE---EAMTLWKKMAEK-GCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISS--GCL 429
Query: 182 PNVLTFNLVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVAL 361
PNV T++ ++K K GL AI V+REM C + + Y L+DGLC R+ +A+ +
Sbjct: 430 PNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMV 489
Query: 362 FDEMQIEGCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKG---CVPNEVTYNTLIHG 532
+ +M G P ++ +I GLC G + A KL M + P+ VTYN L+ G
Sbjct: 490 WSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDG 549
Query: 533 LCLKGKLDKAVSLLARMLSNKLIPNDVTYGTIINGLVKQRRAVDGVHVLMAMEERGYKEN 712
LC++ + +AV LL ML P+ +T T +N L ++ + + E R + E
Sbjct: 550 LCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSDSCE--------EGRSFLEE 601
Query: 713 EYVYSALISGLFKEGKSEEALNLWSKMIGKGCKPNIVVYSALIDGLCREGK 865
L++ L K + A + M+GK P ++ ++ +C+ K
Sbjct: 602 ------LVARLLKRQRVSGACKIVEVMLGKYLAPKTSTWAMIVPEICKPKK 646
Score = 73.9 bits (180), Expect = 1e-10
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 24/218 (11%)
Frame = +2
Query: 5 KAHLHHKAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKNILP 184
K L +A+ ++ R +DE C + ++ +++ + G A+ + ++ I P
Sbjct: 444 KTGLSEEAIQVW-REMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTI--GIKP 500
Query: 185 NVLTFNLVIKALCKLGLVSRAIDVFREM---SSLKCEPDAYTYCTLMDGLCKEDRIDDAV 355
+ + ++ +IK LC +G + A+ ++ EM K +PD TY L+DGLC + + AV
Sbjct: 501 DTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAV 560
Query: 356 ALFDEMQIEGCSPSPATFNVLINGLCKKGD---------------------LARAAKLVD 472
L + M GC P T N +N L +K D ++ A K+V+
Sbjct: 561 DLLNCMLDRGCDPDVITCNTFLNTLSEKSDSCEEGRSFLEELVARLLKRQRVSGACKIVE 620
Query: 473 NMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLARML 586
M K P T+ ++ +C K++ A++ R L
Sbjct: 621 VMLGKYLAPKTSTWAMIVPEICKPKKINAAINKCWRNL 658
>ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated
salt-inducible-like protein [Arabidopsis thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated
salt-inducible-like protein [Arabidopsis thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025
[Arabidopsis thaliana] gi|332658871|gb|AEE84271.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 660
Score = 567 bits (1461), Expect = e-159
Identities = 279/391 (71%), Positives = 320/391 (81%), Gaps = 2/391 (0%)
Frame = +2
Query: 2 GKAHLHHKAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKN-- 175
GKAHL KAVDLF RMVDEF+CK++VKSFNSVLNVII +G+YH LEFYD+V+N+ N
Sbjct: 123 GKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMN 182
Query: 176 ILPNVLTFNLVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAV 355
I PN L+FNLVIKALCKL V RAI+VFR M KC PD YTYCTLMDGLCKE+RID+AV
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 356 ALFDEMQIEGCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGL 535
L DEMQ EGCSPSP +NVLI+GLCKKGDL R KLVDNMFLKGCVPNEVTYNTLIHGL
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 536 CLKGKLDKAVSLLARMLSNKLIPNDVTYGTIINGLVKQRRAVDGVHVLMAMEERGYKENE 715
CLKGKLDKAVSLL RM+S+K IPNDVTYGT+INGLVKQRRA D V +L +MEERGY N+
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQ 362
Query: 716 YVYSALISGLFKEGKSEEALNLWSKMIGKGCKPNIVVYSALIDGLCREGKPYEAEEYLFQ 895
++YS LISGLFKEGK+EEA++LW KM KGCKPNIVVYS L+DGLCREGKP EA+E L +
Sbjct: 363 HIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNR 422
Query: 896 MINIGWSPNAFTCSSLMRGFFKVGNCDRAMLVWKEMVGKDYMDNEVCYSVLLHGLCKNGK 1075
MI G PNA+T SSLM+GFFK G C+ A+ VWKEM N+ CYSVL+ GLC G+
Sbjct: 423 MIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGR 482
Query: 1076 LKDALMVWKHVLTKGLTPDVVAYSSMIHGLC 1168
+K+A+MVW +LT G+ PD VAYSS+I GLC
Sbjct: 483 VKEAMMVWSKMLTIGIKPDTVAYSSIIKGLC 513
Score = 182 bits (463), Expect = 2e-43
Identities = 121/421 (28%), Positives = 200/421 (47%), Gaps = 39/421 (9%)
Frame = +2
Query: 23 KAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKNILPNVLTFN 202
+AV L D M E C + +N +++ + ++G + D++ K +PN +T+N
Sbjct: 240 EAVLLLDEMQSE-GCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMF--LKGCVPNEVTYN 296
Query: 203 LVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVALFDEMQIE 382
+I LC G + +A+ + M S KC P+ TY TL++GL K+ R DAV L M+
Sbjct: 297 TLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEER 356
Query: 383 GCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKA 562
G + ++VLI+GL K+G A L M KGC PN V Y+ L+ GLC +GK ++A
Sbjct: 357 GYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEA 416
Query: 563 VSLLARMLSNKLIPNDVTYGTIINGLVKQRRAVDGVHVLMAMEERGYKENEYVYSALISG 742
+L RM+++ +PN TY +++ G K + V V M++ G N++ YS LI G
Sbjct: 417 KEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDG 476
Query: 743 LFKEGKSEEALNLWSKMIGKGCKPNIVVYSA----------------------------- 835
L G+ +EA+ +WSKM+ G KP+ V YS+
Sbjct: 477 LCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKS 536
Query: 836 ---------LIDGLCREGKPYEAEEYLFQMINIGWSPNAFTCSSLMRGFFKVGN-CDRAM 985
L+DGLC + A + L M++ G P+ TC++ + + N CD+
Sbjct: 537 QPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGR 596
Query: 986 LVWKEMVGKDYMDNEVCYSVLLHGLCKNGKLKDALMVWKHVLTKGLTPDVVAYSSMIHGL 1165
+E+V + L K ++ A + + +L K L P ++ ++ +
Sbjct: 597 SFLEELVVR---------------LLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREI 641
Query: 1166 C 1168
C
Sbjct: 642 C 642
Score = 117 bits (293), Expect = 9e-24
Identities = 78/291 (26%), Positives = 142/291 (48%), Gaps = 3/291 (1%)
Frame = +2
Query: 2 GKAHLHHKAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKNIL 181
GKA +A+ L+ +M ++ CK + ++ +++ + ++G + A E + +I + L
Sbjct: 376 GKAE---EAMSLWRKMAEK-GCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIAS--GCL 429
Query: 182 PNVLTFNLVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVAL 361
PN T++ ++K K GL A+ V++EM C + + Y L+DGLC R+ +A+ +
Sbjct: 430 PNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMV 489
Query: 362 FDEMQIEGCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKG---CVPNEVTYNTLIHG 532
+ +M G P ++ +I GLC G + A KL M + P+ VTYN L+ G
Sbjct: 490 WSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDG 549
Query: 533 LCLKGKLDKAVSLLARMLSNKLIPNDVTYGTIINGLVKQRRAVDGVHVLMAMEERGYKEN 712
LC++ + +AV LL ML P+ +T T +N L ++ + D + R + E
Sbjct: 550 LCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCD--------KGRSFLEE 601
Query: 713 EYVYSALISGLFKEGKSEEALNLWSKMIGKGCKPNIVVYSALIDGLCREGK 865
L+ L K + A + M+GK P ++ ++ +C+ K
Sbjct: 602 ------LVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKK 646
>ref|XP_006283284.1| hypothetical protein CARUB_v10004320mg [Capsella rubella]
gi|482551989|gb|EOA16182.1| hypothetical protein
CARUB_v10004320mg [Capsella rubella]
Length = 660
Score = 564 bits (1454), Expect = e-158
Identities = 275/391 (70%), Positives = 322/391 (82%), Gaps = 2/391 (0%)
Frame = +2
Query: 2 GKAHLHHKAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKN-- 175
GKAHL KAVDLF RMVDEFQCK++VKSFNSVLNVI+ +G+YH LEFYD+V+N+ N
Sbjct: 123 GKAHLPGKAVDLFHRMVDEFQCKRSVKSFNSVLNVILNEGLYHRGLEFYDYVVNSNMNMN 182
Query: 176 ILPNVLTFNLVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAV 355
I PN L+FNLVIKALCKLG V++AI+VFREM KC PD YTYCTLMDGLCKE+RID+AV
Sbjct: 183 IAPNGLSFNLVIKALCKLGFVNKAIEVFREMPEKKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 356 ALFDEMQIEGCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGL 535
L DEMQ EGCSPS T+NVLI+GLCKKGDL R KLVDNMFLKGCVPNEVTYNTLIHGL
Sbjct: 243 LLLDEMQSEGCSPSSVTYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 536 CLKGKLDKAVSLLARMLSNKLIPNDVTYGTIINGLVKQRRAVDGVHVLMAMEERGYKENE 715
CLKGKL+KAVSLL RM+S+K IPNDVTYGT+INGLVKQRRA D V +L++MEERGY N+
Sbjct: 303 CLKGKLNKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLISMEERGYCLNQ 362
Query: 716 YVYSALISGLFKEGKSEEALNLWSKMIGKGCKPNIVVYSALIDGLCREGKPYEAEEYLFQ 895
++YS LISGLFKEGK+EEA+ LW KM+ KGC+PNIVVYSAL+DGLCREGKP EA+E
Sbjct: 363 HIYSVLISGLFKEGKAEEAMTLWKKMVEKGCRPNIVVYSALVDGLCREGKPNEAKEIFRG 422
Query: 896 MINIGWSPNAFTCSSLMRGFFKVGNCDRAMLVWKEMVGKDYMDNEVCYSVLLHGLCKNGK 1075
MI+ G PNA+T SSLM+GFF+ G + A+ VW+EM NE CYSVL+ GLC G+
Sbjct: 423 MISNGCLPNAYTYSSLMKGFFRTGLSEEAIQVWREMDDTGCSRNEFCYSVLIDGLCGIGR 482
Query: 1076 LKDALMVWKHVLTKGLTPDVVAYSSMIHGLC 1168
+ +A+M+W +LT G+ PD VAYSSMI GLC
Sbjct: 483 VNEAMMLWSKMLTIGIKPDTVAYSSMIKGLC 513
Score = 181 bits (458), Expect = 7e-43
Identities = 121/421 (28%), Positives = 203/421 (48%), Gaps = 39/421 (9%)
Frame = +2
Query: 23 KAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKNILPNVLTFN 202
+AV L D M E C + ++N +++ + ++G + D++ K +PN +T+N
Sbjct: 240 EAVLLLDEMQSE-GCSPSSVTYNVLIDGLCKKGDLTRVTKLVDNMF--LKGCVPNEVTYN 296
Query: 203 LVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVALFDEMQIE 382
+I LC G +++A+ + M S KC P+ TY TL++GL K+ R DAV L M+
Sbjct: 297 TLIHGLCLKGKLNKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLISMEER 356
Query: 383 GCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKA 562
G + ++VLI+GL K+G A L M KGC PN V Y+ L+ GLC +GK ++A
Sbjct: 357 GYCLNQHIYSVLISGLFKEGKAEEAMTLWKKMVEKGCRPNIVVYSALVDGLCREGKPNEA 416
Query: 563 VSLLARMLSNKLIPNDVTYGTIINGLVKQRRAVDGVHVLMAMEERGYKENEYVYSALISG 742
+ M+SN +PN TY +++ G + + + + V M++ G NE+ YS LI G
Sbjct: 417 KEIFRGMISNGCLPNAYTYSSLMKGFFRTGLSEEAIQVWREMDDTGCSRNEFCYSVLIDG 476
Query: 743 LFKEGKSEEALNLWSKMIGKGCKPNIVVYSA----------------------------- 835
L G+ EA+ LWSKM+ G KP+ V YS+
Sbjct: 477 LCGIGRVNEAMMLWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCEEEPKS 536
Query: 836 ---------LIDGLCREGKPYEAEEYLFQMINIGWSPNAFTCSSLMRGFF-KVGNCDRAM 985
L DGLC + A + L M++ G P+ TC++ ++ K +C+
Sbjct: 537 QPDIVTYNILFDGLCMQKDVSRAVDLLNFMLDRGCDPDVITCNTFLKTLSEKSDSCEE-- 594
Query: 986 LVWKEMVGKDYMDNEVCYSVLLHGLCKNGKLKDALMVWKHVLTKGLTPDVVAYSSMIHGL 1165
G+++++ L+ L K ++ A + + +L K LTP + + ++ +
Sbjct: 595 -------GRNFLEE------LVLRLLKRQRVSGACKIVEVMLDKYLTPKISTWVLIVPEI 641
Query: 1166 C 1168
C
Sbjct: 642 C 642
Score = 67.8 bits (164), Expect = 8e-09
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 24/215 (11%)
Frame = +2
Query: 14 LHHKAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKNILPNVL 193
L +A+ ++ R +D+ C + ++ +++ + G + A+ + ++ I P+ +
Sbjct: 447 LSEEAIQVW-REMDDTGCSRNEFCYSVLIDGLCGIGRVNEAMMLWSKMLTI--GIKPDTV 503
Query: 194 TFNLVIKALCKLGLVSRAIDVFREM---SSLKCEPDAYTYCTLMDGLCKEDRIDDAVALF 364
++ +IK LC +G + A+ ++ EM K +PD TY L DGLC + + AV L
Sbjct: 504 AYSSMIKGLCGIGSMDAALKLYHEMLCEEEPKSQPDIVTYNILFDGLCMQKDVSRAVDLL 563
Query: 365 DEMQIEGCSPSPATFNVLINGLCKKGD---------------------LARAAKLVDNMF 481
+ M GC P T N + L +K D ++ A K+V+ M
Sbjct: 564 NFMLDRGCDPDVITCNTFLKTLSEKSDSCEEGRNFLEELVLRLLKRQRVSGACKIVEVML 623
Query: 482 LKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLARML 586
K P T+ ++ +C K++ A+ R L
Sbjct: 624 DKYLTPKISTWVLIVPEICKPKKINAAIDKCWRNL 658
>ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223532441|gb|EEF34234.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 653
Score = 564 bits (1454), Expect = e-158
Identities = 278/392 (70%), Positives = 325/392 (82%), Gaps = 1/392 (0%)
Frame = +2
Query: 2 GKAHLHHKAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKK-NI 178
GKAHL +KA++LF RM EF CK TVKSFNSVLNVIIQ G + ALEFY+HV+ K NI
Sbjct: 118 GKAHLPNKAIELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNI 177
Query: 179 LPNVLTFNLVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVA 358
LPNVL+FNL+IK++CKLGLV AI++FREM KC PDAYTYCTLMDGLCK DRID+AV+
Sbjct: 178 LPNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVS 237
Query: 359 LFDEMQIEGCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGLC 538
L DEMQIEGC PSPATFNVLINGLCKKGD R KLVDNMFLKGCVPNEVTYNTLIHGLC
Sbjct: 238 LLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLC 297
Query: 539 LKGKLDKAVSLLARMLSNKLIPNDVTYGTIINGLVKQRRAVDGVHVLMAMEERGYKENEY 718
LKGKLDKA+SLL RM+S+K +PN+VTYGTIINGLVKQ RA+DG VL+ MEERGY NEY
Sbjct: 298 LKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEY 357
Query: 719 VYSALISGLFKEGKSEEALNLWSKMIGKGCKPNIVVYSALIDGLCREGKPYEAEEYLFQM 898
VYS L+SGLFKEGKSEEA+ L+ + + KGCK N V+YSAL+DGLCR+ KP EA + L +M
Sbjct: 358 VYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEM 417
Query: 899 INIGWSPNAFTCSSLMRGFFKVGNCDRAMLVWKEMVGKDYMDNEVCYSVLLHGLCKNGKL 1078
+ G +PNAFT SSLM+GFF+VGN +A+ VWK+M + +NEVCYSVL+HGLCK+GK+
Sbjct: 418 TDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKV 477
Query: 1079 KDALMVWKHVLTKGLTPDVVAYSSMIHGLCNA 1174
+A+MVW +L G PDVVAYSSMI GLC+A
Sbjct: 478 MEAMMVWAKMLATGCRPDVVAYSSMIQGLCDA 509
Score = 165 bits (418), Expect = 3e-38
Identities = 116/422 (27%), Positives = 195/422 (46%), Gaps = 40/422 (9%)
Frame = +2
Query: 23 KAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKNILPNVLTFN 202
+AV L D M E C + +FN ++N + ++G + + D++ K +PN +T+N
Sbjct: 234 EAVSLLDEMQIE-GCFPSPATFNVLINGLCKKGDFTRVTKLVDNMF--LKGCVPNEVTYN 290
Query: 203 LVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVALFDEMQIE 382
+I LC G + +A+ + M S KC P+ TY T+++GL K+ R D + M+
Sbjct: 291 TLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEER 350
Query: 383 GCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKA 562
G + ++VL++GL K+G A +L KGC N V Y+ L+ GLC K D+A
Sbjct: 351 GYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEA 410
Query: 563 VSLLARMLSNKLIPNDVTYGTIINGLVKQRRAVDGVHVLMAMEERGYKENEYVYSALISG 742
+ +L+ M PN T+ +++ G + + + V M + ENE YS LI G
Sbjct: 411 MKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHG 470
Query: 743 LFKEGKSEEALNLWSKMIGKGCKPNIVVYSALI--------------------------- 841
L K+GK EA+ +W+KM+ GC+P++V YS++I
Sbjct: 471 LCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQ 530
Query: 842 ----------DGLCREGKPYEAEEYLFQMINIGWSPNAFTCSSLMRGFFKVGNCDRAMLV 991
+ LC++ A + L M++ G P+ TC+ +R ML
Sbjct: 531 PDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLR-----------MLR 579
Query: 992 WK---EMVGKDYMDNEVCYSVLLHGLCKNGKLKDALMVWKHVLTKGLTPDVVAYSSMIHG 1162
K G ++D L+ L K + A + + +L K L+P ++ ++H
Sbjct: 580 EKLDPPQDGAKFLDE------LVVRLLKRQRNLGASKIVEVMLQKFLSPKASTWARVVHE 633
Query: 1163 LC 1168
LC
Sbjct: 634 LC 635
Score = 69.7 bits (169), Expect = 2e-09
Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 2/169 (1%)
Frame = +2
Query: 65 CKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKNILPNVLTFNLVIKALCKLGLVSR 244
C+ V +++S++ + G AL+ Y+ ++ + + P+V+T+N++ ALCK +SR
Sbjct: 492 CRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISR 551
Query: 245 AIDVFREMSSLKCEPDAYTYCTLMDGLCKE--DRIDDAVALFDEMQIEGCSPSPATFNVL 418
A+D+ M C+PD T C + + +E D D DE+ +
Sbjct: 552 AVDLLNSMLDRGCDPDLVT-CNIFLRMLREKLDPPQDGAKFLDELVVR------------ 598
Query: 419 INGLCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAV 565
L K+ A+K+V+ M K P T+ ++H LC K+ +
Sbjct: 599 ---LLKRQRNLGASKIVEVMLQKFLSPKASTWARVVHELCQPKKIQAVI 644
>ref|XP_002304600.2| hypothetical protein POPTR_0003s15360g [Populus trichocarpa]
gi|550343237|gb|EEE79579.2| hypothetical protein
POPTR_0003s15360g [Populus trichocarpa]
Length = 672
Score = 564 bits (1453), Expect = e-158
Identities = 277/392 (70%), Positives = 324/392 (82%), Gaps = 1/392 (0%)
Frame = +2
Query: 2 GKAHLHHKAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKK-NI 178
GKAHL KAV LFDRM EF+CK+TVKSFNSVLNVIIQ+G+++ ALEFY+HVI K NI
Sbjct: 137 GKAHLPEKAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNI 196
Query: 179 LPNVLTFNLVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVA 358
PNVLTFNLVIK +CK+GLV A+ +FR+M KC+PD YTYCTLMDGLCK DRID+AV+
Sbjct: 197 SPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVS 256
Query: 359 LFDEMQIEGCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGLC 538
L DEMQI+GC PSP TFNVLINGLCKKGDLAR AKLVDNMFLKGC PNEVTYNTLIHGLC
Sbjct: 257 LLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLC 316
Query: 539 LKGKLDKAVSLLARMLSNKLIPNDVTYGTIINGLVKQRRAVDGVHVLMAMEERGYKENEY 718
LKGKL+KA+SLL RM+S+K +PN VTYGTIINGLVKQ RA+DG VL MEERGY NEY
Sbjct: 317 LKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEY 376
Query: 719 VYSALISGLFKEGKSEEALNLWSKMIGKGCKPNIVVYSALIDGLCREGKPYEAEEYLFQM 898
VYSALISGLFKEGKS+EA+ L+ +M K C+ N +VYSA+IDGLCR+GKP EA E L +M
Sbjct: 377 VYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEM 436
Query: 899 INIGWSPNAFTCSSLMRGFFKVGNCDRAMLVWKEMVGKDYMDNEVCYSVLLHGLCKNGKL 1078
N PNA+T SSLM+GFF+ GN +A+ +WK+M ++ NEVCYSVL+HGLCK+GK+
Sbjct: 437 TNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKV 496
Query: 1079 KDALMVWKHVLTKGLTPDVVAYSSMIHGLCNA 1174
K+A+MVW +L KG PDVVAY SMI+GL NA
Sbjct: 497 KEAMMVWAQMLGKGCKPDVVAYGSMINGLSNA 528
Score = 174 bits (441), Expect = 6e-41
Identities = 116/426 (27%), Positives = 201/426 (47%), Gaps = 37/426 (8%)
Frame = +2
Query: 5 KAHLHHKAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKNILP 184
KA +AV L D M + C + +FN ++N + ++G + D++ K P
Sbjct: 247 KADRIDEAVSLLDEMQID-GCFPSPVTFNVLINGLCKKGDLARVAKLVDNMF--LKGCAP 303
Query: 185 NVLTFNLVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVALF 364
N +T+N +I LC G + +AI + M S KC P+ TY T+++GL K+ R D +
Sbjct: 304 NEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVL 363
Query: 365 DEMQIEGCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGLCLK 544
M+ G + ++ LI+GL K+G A +L M +K C N + Y+ +I GLC
Sbjct: 364 ALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRD 423
Query: 545 GKLDKAVSLLARMLSNKLIPNDVTYGTIINGLVKQRRAVDGVHVLMAMEERGYKENEYVY 724
GK D+A+ +L+ M +N+ PN TY +++ G + + + M + + +NE Y
Sbjct: 424 GKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCY 483
Query: 725 SALISGLFKEGKSEEALNLWSKMIGKGCKPNIVVYSA----------------------- 835
S LI GL K+GK +EA+ +W++M+GKGCKP++V Y +
Sbjct: 484 SVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLC 543
Query: 836 --------------LIDGLCREGKPYEAEEYLFQMINIGWSPNAFTCSSLMRGFFKVGNC 973
L++ LC++ A + L M++ G P+ TC +R +
Sbjct: 544 QEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTLRE---- 599
Query: 974 DRAMLVWKEMVGKDYMDNEVCYSVLLHGLCKNGKLKDALMVWKHVLTKGLTPDVVAYSSM 1153
+ G++++D L+ L K ++ A + + +L K L P ++ +
Sbjct: 600 ----KLDPPQDGREFLDG------LVVRLLKRQRVLGASKIVEVMLQKLLPPKPSTWTRV 649
Query: 1154 IHGLCN 1171
+ LCN
Sbjct: 650 VEDLCN 655
Score = 95.5 bits (236), Expect = 4e-17
Identities = 67/270 (24%), Positives = 130/270 (48%), Gaps = 3/270 (1%)
Frame = +2
Query: 23 KAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKNILPNVLTFN 202
+A+ LF M + +C+ +++V++ + + G ALE + NN+ PN T++
Sbjct: 393 EAMQLFKEMTVK-ECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCK--PNAYTYS 449
Query: 203 LVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVALFDEMQIE 382
++K + G +AI+++++M+ + Y L+ GLCK+ ++ +A+ ++ +M +
Sbjct: 450 SLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGK 509
Query: 383 GCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLK--GCVPNEVTYNTLIHGLCLKGKLD 556
GC P + +INGL G + A +L + M + P+ VTYN L++ LC + +
Sbjct: 510 GCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSIS 569
Query: 557 KAVSLLARMLSNKLIPNDVTYGTIINGL-VKQRRAVDGVHVLMAMEERGYKENEYVYSAL 733
+A+ LL ML P+ VT + L K DG L + R K + ++
Sbjct: 570 RAIDLLNSMLDRGCDPDLVTCIIFLRTLREKLDPPQDGREFLDGLVVRLLKRQRVLGASK 629
Query: 734 ISGLFKEGKSEEALNLWSKMIGKGCKPNIV 823
I + + + W++++ C P V
Sbjct: 630 IVEVMLQKLLPPKPSTWTRVVEDLCNPKKV 659
Score = 70.5 bits (171), Expect = 1e-09
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 1/168 (0%)
Frame = +2
Query: 65 CKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKNILPNVLTFNLVIKALCKLGLVSR 244
CK V ++ S++N + G+ AL+ Y+ ++ + + P+V+T+N+++ ALCK +SR
Sbjct: 511 CKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISR 570
Query: 245 AIDVFREMSSLKCEPDAYTYCTLMDGLC-KEDRIDDAVALFDEMQIEGCSPSPATFNVLI 421
AID+ M C+PD T + L K D D D + +
Sbjct: 571 AIDLLNSMLDRGCDPDLVTCIIFLRTLREKLDPPQDGREFLDGLVVR------------- 617
Query: 422 NGLCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAV 565
L K+ + A+K+V+ M K P T+ ++ LC K+ A+
Sbjct: 618 --LLKRQRVLGASKIVEVMLQKLLPPKPSTWTRVVEDLCNPKKVQAAI 663
>ref|XP_006404148.1| hypothetical protein EUTSA_v10010168mg [Eutrema salsugineum]
gi|557105267|gb|ESQ45601.1| hypothetical protein
EUTSA_v10010168mg [Eutrema salsugineum]
Length = 696
Score = 560 bits (1442), Expect = e-157
Identities = 271/389 (69%), Positives = 318/389 (81%)
Frame = +2
Query: 2 GKAHLHHKAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKNIL 181
GKAHL K ++LF RMVDEFQCK+T+KSFNSVLNVII +G YH LEFYD+V+N+ NI
Sbjct: 161 GKAHLPEKTIELFHRMVDEFQCKRTIKSFNSVLNVIINEGRYHRGLEFYDYVVNSNMNIA 220
Query: 182 PNVLTFNLVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVAL 361
PN L+FNLVIKA+CKLG V RAI+VFR M KC PD YTYCTLMDGLCKE+RID+AV L
Sbjct: 221 PNGLSFNLVIKAMCKLGFVDRAIEVFRVMPEKKCVPDGYTYCTLMDGLCKEERIDEAVLL 280
Query: 362 FDEMQIEGCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGLCL 541
DEMQ EGCSPS T+NVLI+GLCKKGDL R KLVDNMFLKGCVPN+VTYNTLIHGLCL
Sbjct: 281 LDEMQSEGCSPSSVTYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNKVTYNTLIHGLCL 340
Query: 542 KGKLDKAVSLLARMLSNKLIPNDVTYGTIINGLVKQRRAVDGVHVLMAMEERGYKENEYV 721
KGKLDKAVSLL RM+S+K IPNDVTYGT+INGLVKQRRA+DG +L++MEERGY+ N++V
Sbjct: 341 KGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGAGLLISMEERGYRLNQHV 400
Query: 722 YSALISGLFKEGKSEEALNLWSKMIGKGCKPNIVVYSALIDGLCREGKPYEAEEYLFQMI 901
YS LISGLFKEGK EEA++LW KM KGC+PNIVVYSAL+DGLCR+GK EA+E MI
Sbjct: 401 YSILISGLFKEGKVEEAMSLWKKMGEKGCQPNIVVYSALVDGLCRQGKTKEAKEIFDIMI 460
Query: 902 NIGWSPNAFTCSSLMRGFFKVGNCDRAMLVWKEMVGKDYMDNEVCYSVLLHGLCKNGKLK 1081
+ G PN +T SSLM+GFFK G + A+ VW+EM + N+VCYSVL+ GLC G++K
Sbjct: 461 SNGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDNTECSRNKVCYSVLIDGLCGVGRVK 520
Query: 1082 DALMVWKHVLTKGLTPDVVAYSSMIHGLC 1168
+A+MVW +L G+ PD VAYSSMI G C
Sbjct: 521 EAMMVWSKMLIIGIKPDTVAYSSMIKGFC 549
Score = 172 bits (435), Expect = 3e-40
Identities = 117/421 (27%), Positives = 198/421 (47%), Gaps = 39/421 (9%)
Frame = +2
Query: 23 KAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKNILPNVLTFN 202
+AV L D M E C + ++N +++ + ++G + D++ K +PN +T+N
Sbjct: 276 EAVLLLDEMQSE-GCSPSSVTYNVLIDGLCKKGDLTRVTKLVDNMF--LKGCVPNKVTYN 332
Query: 203 LVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVALFDEMQIE 382
+I LC G + +A+ + M S KC P+ TY TL++GL K+ R D L M+
Sbjct: 333 TLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGAGLLISMEER 392
Query: 383 GCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKA 562
G + +++LI+GL K+G + A L M KGC PN V Y+ L+ GLC +GK +A
Sbjct: 393 GYRLNQHVYSILISGLFKEGKVEEAMSLWKKMGEKGCQPNIVVYSALVDGLCRQGKTKEA 452
Query: 563 VSLLARMLSNKLIPNDVTYGTIINGLVKQRRAVDGVHVLMAMEERGYKENEYVYSALISG 742
+ M+SN +PN TY +++ G K + + + V M+ N+ YS LI G
Sbjct: 453 KEIFDIMISNGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDNTECSRNKVCYSVLIDG 512
Query: 743 LFKEGKSEEALNLWSKMIGKGCKPNIVVYSAL---------------------------- 838
L G+ +EA+ +WSKM+ G KP+ V YS++
Sbjct: 513 LCGVGRVKEAMMVWSKMLIIGIKPDTVAYSSMIKGFCGIGSMDAAIRLYHEMLCQEDHKS 572
Query: 839 ----------IDGLCREGKPYEAEEYLFQMINIGWSPNAFTCSSLMRGFFKVG-NCDRAM 985
IDG C + A + L M++ G P+A TC + ++ K +C+
Sbjct: 573 QPDVVTYNIIIDGFCMQKDISRAVDLLNCMLDRGCDPDAITCDTFLKTLSKKSDSCEE-- 630
Query: 986 LVWKEMVGKDYMDNEVCYSVLLHGLCKNGKLKDALMVWKHVLTKGLTPDVVAYSSMIHGL 1165
GK +++ L+ L K ++ A + + +L+K LTP ++ ++ +
Sbjct: 631 -------GKSFLEE------LVVRLLKRQRVSGACKIVEVMLSKYLTPKASTWAMIVPEI 677
Query: 1166 C 1168
C
Sbjct: 678 C 678
Score = 67.8 bits (164), Expect = 8e-09
Identities = 51/220 (23%), Positives = 96/220 (43%), Gaps = 3/220 (1%)
Frame = +2
Query: 5 KAHLHHKAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKNILP 184
K L +A+ ++ R +D +C + ++ +++ + G A+ + ++ I P
Sbjct: 480 KTGLSEEAIQVW-REMDNTECSRNKVCYSVLIDGLCGVGRVKEAMMVWSKMLII--GIKP 536
Query: 185 NVLTFNLVIKALCKLGLVSRAIDVFREM---SSLKCEPDAYTYCTLMDGLCKEDRIDDAV 355
+ + ++ +IK C +G + AI ++ EM K +PD TY ++DG C + I AV
Sbjct: 537 DTVAYSSMIKGFCGIGSMDAAIRLYHEMLCQEDHKSQPDVVTYNIIIDGFCMQKDISRAV 596
Query: 356 ALFDEMQIEGCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGL 535
L + M GC P T + + L KK D C + L+ L
Sbjct: 597 DLLNCMLDRGCDPDAITCDTFLKTLSKKSD--------------SCEEGKSFLEELVVRL 642
Query: 536 CLKGKLDKAVSLLARMLSNKLIPNDVTYGTIINGLVKQRR 655
+ ++ A ++ MLS L P T+ I+ + K ++
Sbjct: 643 LKRQRVSGACKIVEVMLSKYLTPKASTWAMIVPEICKPKK 682
>gb|EXB83265.1| hypothetical protein L484_011559 [Morus notabilis]
Length = 699
Score = 551 bits (1421), Expect = e-154
Identities = 274/405 (67%), Positives = 326/405 (80%), Gaps = 14/405 (3%)
Frame = +2
Query: 2 GKAHLHHKAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFY----------- 148
GKAHL +KAVDLF RM+ +F+C+ TVKSFNSVLNVIIQ+ + +AL+FY
Sbjct: 113 GKAHLPNKAVDLFQRMLHDFRCRPTVKSFNSVLNVIIQEHKFSYALDFYYSNVVALRSGV 172
Query: 149 --DHVINNKK-NILPNVLTFNLVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMD 319
D+++N K NI PNVLTFNLVIKA+CKLGLV RA+ VFRE+ C PD +TY TLMD
Sbjct: 173 CKDNILNMKNMNISPNVLTFNLVIKAMCKLGLVDRAVQVFREIPLRNCTPDVFTYSTLMD 232
Query: 320 GLCKEDRIDDAVALFDEMQIEGCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKGCVP 499
GLCKE+RID+AV+L DEMQIEGC PSP TFNVLI+ LCKKGD+ RAAKLVDNMFLK C+P
Sbjct: 233 GLCKENRIDEAVSLLDEMQIEGCFPSPVTFNVLISALCKKGDIGRAAKLVDNMFLKDCLP 292
Query: 500 NEVTYNTLIHGLCLKGKLDKAVSLLARMLSNKLIPNDVTYGTIINGLVKQRRAVDGVHVL 679
NE TYN LIHGLCLKGKL+KAVSLL RM+ NK +PNDVTYGTIINGLVK RA DG ++L
Sbjct: 293 NEATYNALIHGLCLKGKLNKAVSLLDRMVMNKCVPNDVTYGTIINGLVKHGRAFDGANLL 352
Query: 680 MAMEERGYKENEYVYSALISGLFKEGKSEEALNLWSKMIGKGCKPNIVVYSALIDGLCRE 859
++MEERG NEYVYSALISGLFKEGK EEA+ LW M GKG KPN+VVYSALIDGLCRE
Sbjct: 353 VSMEERGRHANEYVYSALISGLFKEGKYEEAMGLWKDMTGKGHKPNVVVYSALIDGLCRE 412
Query: 860 GKPYEAEEYLFQMINIGWSPNAFTCSSLMRGFFKVGNCDRAMLVWKEMVGKDYMDNEVCY 1039
GKP +A+E +F+M+ G++PN+ T SSLMRGFFK +A+L+WKE+V + ++NE CY
Sbjct: 413 GKPDKAKEVMFEMVKNGFNPNSRTYSSLMRGFFKASESHKAILLWKEIVANN-LENEFCY 471
Query: 1040 SVLLHGLCKNGKLKDALMVWKHVLTKGLTPDVVAYSSMIHGLCNA 1174
SVL+ GLC +GKLK+ALM+WK +L +G PDVVAYSSMIHGLC A
Sbjct: 472 SVLIDGLCGDGKLKEALMMWKQMLYRGFKPDVVAYSSMIHGLCTA 516
Score = 174 bits (440), Expect = 8e-41
Identities = 114/373 (30%), Positives = 183/373 (49%), Gaps = 1/373 (0%)
Frame = +2
Query: 23 KAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKNILPNVLTFN 202
+AV L D M E C + +FN +++ + ++G A + D++ K+ LPN T+N
Sbjct: 242 EAVSLLDEMQIE-GCFPSPVTFNVLISALCKKGDIGRAAKLVDNMF--LKDCLPNEATYN 298
Query: 203 LVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVALFDEMQIE 382
+I LC G +++A+ + M KC P+ TY T+++GL K R D L M+
Sbjct: 299 ALIHGLCLKGKLNKAVSLLDRMVMNKCVPNDVTYGTIINGLVKHGRAFDGANLLVSMEER 358
Query: 383 GCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKA 562
G + ++ LI+GL K+G A L +M KG PN V Y+ LI GLC +GK DKA
Sbjct: 359 GRHANEYVYSALISGLFKEGKYEEAMGLWKDMTGKGHKPNVVVYSALIDGLCREGKPDKA 418
Query: 563 VSLLARMLSNKLIPNDVTYGTIINGLVKQRRAVDGVHVLMAMEERGYKENEYVYSALISG 742
++ M+ N PN TY +++ G K + + + + ENE+ YS LI G
Sbjct: 419 KEVMFEMVKNGFNPNSRTYSSLMRGFFKASESHKAILLWKEIVANNL-ENEFCYSVLIDG 477
Query: 743 LFKEGKSEEALNLWSKMIGKGCKPNIVVYSALIDGLCREGKPYEAEEYLFQMINIGWSPN 922
L +GK +EAL +W +M+ +G KP++V YS++I GLC G E +M+
Sbjct: 478 LCGDGKLKEALMMWKQMLYRGFKPDVVAYSSMIHGLCTAGLVEEGMNLFNEML------- 530
Query: 923 AFTCSSLMRGFFKVGNCDRAMLVWKEMVGKDYMDNEVCYSVLLHGLCKN-GKLKDALMVW 1099
+ + + + Y++LL+ LCKN G + A+ +
Sbjct: 531 --------------------------CLEPESQPDVITYNILLNALCKNGGSISRAVDLL 564
Query: 1100 KHVLTKGLTPDVV 1138
++L G PDV+
Sbjct: 565 NYMLDLGCDPDVI 577
>ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein At4g20090-like
[Cucumis sativus]
Length = 646
Score = 551 bits (1420), Expect = e-154
Identities = 267/391 (68%), Positives = 320/391 (81%), Gaps = 1/391 (0%)
Frame = +2
Query: 2 GKAHLHHKAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVIN-NKKNI 178
GKAHL +AV+ F RM ++ CKQTVKSFNSVLNVIIQ+G + +A +FY HV N K
Sbjct: 111 GKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGF 170
Query: 179 LPNVLTFNLVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVA 358
PN+LT+NL+IKALCKLG + RA+D FREM C PD +TY TLM+GLCKE R+D+AV
Sbjct: 171 QPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVF 230
Query: 359 LFDEMQIEGCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGLC 538
L DEMQ EGC P+P TFNVLI+ L K GDL+RAAKLVDNMFLKGCVPNEVTYNTLIHGLC
Sbjct: 231 LLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLC 290
Query: 539 LKGKLDKAVSLLARMLSNKLIPNDVTYGTIINGLVKQRRAVDGVHVLMAMEERGYKENEY 718
LKGKLDKA+SLL +M+S+K +PN VTYGTIINGLVKQRRA DGVH+LM+MEERG K NEY
Sbjct: 291 LKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEY 350
Query: 719 VYSALISGLFKEGKSEEALNLWSKMIGKGCKPNIVVYSALIDGLCREGKPYEAEEYLFQM 898
+YS+LISGLFKEGKSE A+ LW +M KGCKPN+VVY A IDGLCR+ KP EAE+ L +M
Sbjct: 351 IYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEM 410
Query: 899 INIGWSPNAFTCSSLMRGFFKVGNCDRAMLVWKEMVGKDYMDNEVCYSVLLHGLCKNGKL 1078
++ G+ PNAFT SSLM+GFFK G+ +A+LVWKEM+ +D N VC SVLL+GLC++G+L
Sbjct: 411 LSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRL 470
Query: 1079 KDALMVWKHVLTKGLTPDVVAYSSMIHGLCN 1171
++AL VW H+L +GL PDVVAYSSMI GLC+
Sbjct: 471 REALTVWTHMLGEGLKPDVVAYSSMIKGLCD 501
Score = 100 bits (250), Expect = 9e-19
Identities = 75/295 (25%), Positives = 130/295 (44%), Gaps = 38/295 (12%)
Frame = +2
Query: 86 FNSVLNVIIQQGVYHHALEFYDHVINNKKNILPNVLTFNLVIKALCKLGLVSRAIDVFRE 265
++S+++ + ++G +A+ + + +K PNV+ + I LC+ A D+ +E
Sbjct: 352 YSSLISGLFKEGKSENAVRLWKEMA--EKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQE 409
Query: 266 MSSLKCEPDAYTYCTLMDGLCKEDRIDDAVALFDEMQIEGCSPSPATFNVLINGLCKKGD 445
M S P+A+TY +LM G K+ A+ ++ EM + + +VL+NGLC+ G
Sbjct: 410 MLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGR 469
Query: 446 LARAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLARMLSN--KLIPNDVTY 619
L A + +M +G P+ V Y+++I GLC G +DK + L M K P+ VTY
Sbjct: 470 LREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTY 529
Query: 620 GTIINGLVKQRRAVDGVHVLMAMEERGY---------------------KENEYVYSALI 736
+ N L +Q + +L +M + G ++ L+
Sbjct: 530 NILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELV 589
Query: 737 SGLFKEGKSEEALNL---------------WSKMIGKGCKPNIVVYSALIDGLCR 856
L K + AL + WS++I + CKP + ID CR
Sbjct: 590 VRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRI--RETIDECCR 642
Score = 77.4 bits (189), Expect = 1e-11
Identities = 41/153 (26%), Positives = 84/153 (54%), Gaps = 2/153 (1%)
Frame = +2
Query: 83 SFNSVLNVIIQQGVYHHALEFYDHVINNKKNILPNVLTFNLVIKALCKLGLVSRAIDVFR 262
+++S++ ++G A+ + +++ +++ NV+ ++++ LC+ G + A+ V+
Sbjct: 421 TYSSLMKGFFKKGDSQKAILVWKEMMS--QDMRHNVVCCSVLLNGLCESGRLREALTVWT 478
Query: 263 EMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVALFDEMQIEG--CSPSPATFNVLINGLCK 436
M +PD Y +++ GLC +D + LF EMQ + P T+N+L N LC+
Sbjct: 479 HMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCR 538
Query: 437 KGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGL 535
+ +L RA L+++M +GC P+ +T N + L
Sbjct: 539 QDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETL 571
>ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein At4g20090-like
[Cucumis sativus] gi|449471531|ref|XP_004153336.1|
PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 551 bits (1420), Expect = e-154
Identities = 267/391 (68%), Positives = 320/391 (81%), Gaps = 1/391 (0%)
Frame = +2
Query: 2 GKAHLHHKAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVIN-NKKNI 178
GKAHL +AV+ F RM ++ CKQTVKSFNSVLNVIIQ+G + +A +FY HV N K
Sbjct: 135 GKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGF 194
Query: 179 LPNVLTFNLVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVA 358
PN+LT+NL+IKALCKLG + RA+D FREM C PD +TY TLM+GLCKE R+D+AV
Sbjct: 195 QPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVF 254
Query: 359 LFDEMQIEGCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGLC 538
L DEMQ EGC P+P TFNVLI+ L K GDL+RAAKLVDNMFLKGCVPNEVTYNTLIHGLC
Sbjct: 255 LLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLC 314
Query: 539 LKGKLDKAVSLLARMLSNKLIPNDVTYGTIINGLVKQRRAVDGVHVLMAMEERGYKENEY 718
LKGKLDKA+SLL +M+S+K +PN VTYGTIINGLVKQRRA DGVH+LM+MEERG K NEY
Sbjct: 315 LKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEY 374
Query: 719 VYSALISGLFKEGKSEEALNLWSKMIGKGCKPNIVVYSALIDGLCREGKPYEAEEYLFQM 898
+YS+LISGLFKEGKSE A+ LW +M KGCKPN+VVY A IDGLCR+ KP EAE+ L +M
Sbjct: 375 IYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEM 434
Query: 899 INIGWSPNAFTCSSLMRGFFKVGNCDRAMLVWKEMVGKDYMDNEVCYSVLLHGLCKNGKL 1078
++ G+ PNAFT SSLM+GFFK G+ +A+LVWKEM+ +D N VC SVLL+GLC++G+L
Sbjct: 435 LSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRL 494
Query: 1079 KDALMVWKHVLTKGLTPDVVAYSSMIHGLCN 1171
++AL VW H+L +GL PDVVAYSSMI GLC+
Sbjct: 495 REALTVWTHMLGEGLKPDVVAYSSMIKGLCD 525
Score = 100 bits (250), Expect = 9e-19
Identities = 75/295 (25%), Positives = 130/295 (44%), Gaps = 38/295 (12%)
Frame = +2
Query: 86 FNSVLNVIIQQGVYHHALEFYDHVINNKKNILPNVLTFNLVIKALCKLGLVSRAIDVFRE 265
++S+++ + ++G +A+ + + +K PNV+ + I LC+ A D+ +E
Sbjct: 376 YSSLISGLFKEGKSENAVRLWKEMA--EKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQE 433
Query: 266 MSSLKCEPDAYTYCTLMDGLCKEDRIDDAVALFDEMQIEGCSPSPATFNVLINGLCKKGD 445
M S P+A+TY +LM G K+ A+ ++ EM + + +VL+NGLC+ G
Sbjct: 434 MLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGR 493
Query: 446 LARAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLARMLSN--KLIPNDVTY 619
L A + +M +G P+ V Y+++I GLC G +DK + L M K P+ VTY
Sbjct: 494 LREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTY 553
Query: 620 GTIINGLVKQRRAVDGVHVLMAMEERGY---------------------KENEYVYSALI 736
+ N L +Q + +L +M + G ++ L+
Sbjct: 554 NILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELV 613
Query: 737 SGLFKEGKSEEALNL---------------WSKMIGKGCKPNIVVYSALIDGLCR 856
L K + AL + WS++I + CKP + ID CR
Sbjct: 614 VRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRI--RETIDECCR 666
Score = 77.4 bits (189), Expect = 1e-11
Identities = 41/153 (26%), Positives = 84/153 (54%), Gaps = 2/153 (1%)
Frame = +2
Query: 83 SFNSVLNVIIQQGVYHHALEFYDHVINNKKNILPNVLTFNLVIKALCKLGLVSRAIDVFR 262
+++S++ ++G A+ + +++ +++ NV+ ++++ LC+ G + A+ V+
Sbjct: 445 TYSSLMKGFFKKGDSQKAILVWKEMMS--QDMRHNVVCCSVLLNGLCESGRLREALTVWT 502
Query: 263 EMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVALFDEMQIEG--CSPSPATFNVLINGLCK 436
M +PD Y +++ GLC +D + LF EMQ + P T+N+L N LC+
Sbjct: 503 HMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCR 562
Query: 437 KGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGL 535
+ +L RA L+++M +GC P+ +T N + L
Sbjct: 563 QDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETL 595
>ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g20090-like
isoform X1 [Glycine max] gi|571476386|ref|XP_006586943.1|
PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like isoform X2 [Glycine max]
gi|571476388|ref|XP_006586944.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g20090-like isoform X3 [Glycine max]
gi|571476390|ref|XP_006586945.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g20090-like isoform X4 [Glycine max]
gi|571476393|ref|XP_006586946.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g20090-like isoform X5 [Glycine max]
gi|571476395|ref|XP_006586947.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g20090-like isoform X6 [Glycine max]
Length = 642
Score = 551 bits (1420), Expect = e-154
Identities = 266/392 (67%), Positives = 323/392 (82%), Gaps = 1/392 (0%)
Frame = +2
Query: 2 GKAHLHHKAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKK-NI 178
GKAHL KAVDLF RM EFQCKQTVKSFNSVLNVI+Q+G+++ ALEFY+HV+ +K NI
Sbjct: 107 GKAHLPEKAVDLFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNI 166
Query: 179 LPNVLTFNLVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVA 358
PN LTFNLVIKA+C+LGLV +AI+VFRE+ C PD YTY TLM GLCKE+RID+AV+
Sbjct: 167 HPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVS 226
Query: 359 LFDEMQIEGCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKGCVPNEVTYNTLIHGLC 538
L DEMQ+EG P+ FNVLI+ LCKKGDL RAAKLVDNMFLKGCVPNEVTYN L+HGLC
Sbjct: 227 LLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLC 286
Query: 539 LKGKLDKAVSLLARMLSNKLIPNDVTYGTIINGLVKQRRAVDGVHVLMAMEERGYKENEY 718
LKGKL+KAVSLL +M+SNK +PNDVT+GT+ING V Q RA DG VL+++E RG++ NEY
Sbjct: 287 LKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEY 346
Query: 719 VYSALISGLFKEGKSEEALNLWSKMIGKGCKPNIVVYSALIDGLCREGKPYEAEEYLFQM 898
VYS+LISGL KEGK +A+ LW +M+GKGC PN +VYSALIDGLCREGK EA +L +M
Sbjct: 347 VYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEM 406
Query: 899 INIGWSPNAFTCSSLMRGFFKVGNCDRAMLVWKEMVGKDYMDNEVCYSVLLHGLCKNGKL 1078
N G+ PN+FT SSLMRG+F+ G+ +A+LVWKEM + + NEVCYS+L++GLCK+GK
Sbjct: 407 KNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKF 466
Query: 1079 KDALMVWKHVLTKGLTPDVVAYSSMIHGLCNA 1174
+ALMVWK +L++G+ DVVAYSSMIHG CNA
Sbjct: 467 MEALMVWKQMLSRGIKLDVVAYSSMIHGFCNA 498
Score = 88.6 bits (218), Expect = 4e-15
Identities = 62/271 (22%), Positives = 131/271 (48%), Gaps = 3/271 (1%)
Frame = +2
Query: 20 HKAVDLFDRMVDEFQCKQTVKSFNSVLNVIIQQGVYHHALEFYDHVINNKKNILPNVLTF 199
++A++L+ MV + C ++++++ + ++G A F + N K LPN T+
Sbjct: 362 NQAMELWKEMVGK-GCGPNTIVYSALIDGLCREGKLDEARGFLSEMKN--KGYLPNSFTY 418
Query: 200 NLVIKALCKLGLVSRAIDVFREMSSLKCEPDAYTYCTLMDGLCKEDRIDDAVALFDEMQI 379
+ +++ + G +AI V++EM++ C + Y L++GLCK+ + +A+ ++ +M
Sbjct: 419 SSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLS 478
Query: 380 EGCSPSPATFNVLINGLCKKGDLARAAKLVDNMFLKGCV--PNEVTYNTLIHGLCLKGKL 553
G ++ +I+G C + + KL + M +G V P+ +TYN L++ C++ +
Sbjct: 479 RGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSI 538
Query: 554 DKAVSLLARMLSNKLIPNDVTYGTIINGLVKQRR-AVDGVHVLMAMEERGYKENEYVYSA 730
+A+ +L ML P+ +T + L + DG L + R K + ++
Sbjct: 539 FRAIDILNIMLDQGCDPDFITCDIFLKTLRENMNPPQDGREFLDELVVRLVKRQRTIGAS 598
Query: 731 LISGLFKEGKSEEALNLWSKMIGKGCKPNIV 823
I + + W+ ++ + CKP V
Sbjct: 599 KIIEVMMHKFLLPKASTWAMVVQQVCKPKNV 629